Clickable map CGI

HIX0213737
HIT000010620 ( AK027348 )
  Representative transcript
  (Cytosolic carboxypeptidase 6.)
  genome : 49,049,542 - 49,511,386 (461,845)
  query : 1 - 3,938 (3,938/3,938)
  7 exons
  identity = 0.999
  3'(1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR000834 : Peptidase M14, carboxypeptidase A
  GO :
    0004181 : Molecular Function : metallocarboxypeptidase activity
    0006508 : Biological Process : proteolysis
    0008270 : Molecular Function : zinc ion binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 16.5, cyto 14.5, nucl 11.5, extr 2, cysk 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0213737)

HIX0213737
HIT000514055 ( ENST00000416121 )
  (Peptidase M14, carboxypeptidase A domain containing protein.)
  genome : 49,049,542 - 49,511,386 (461,845)
  query : 1 - 3,938 (3,938/3,938)
  7 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 17, cyto 14.5, nucl 12.5, extr 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0213737)

HIX0213737
HIT000502601 ( BC144171 )
  (Cytosolic carboxypeptidase 6.)
  genome : 49,052,450 - 49,511,319 (458,870)
  query : 1 - 873 (873/873)
  6 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR000834 : Peptidase M14, carboxypeptidase A
  GO :
    0004181 : Molecular Function : metallocarboxypeptidase activity
    0006508 : Biological Process : proteolysis
    0008270 : Molecular Function : zinc ion binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 15, cyto 8, cyto_nucl 8, nucl 4, mito 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0213737)

HIX0213737
HIT000388975 ( BC126383 )
  (Cytosolic carboxypeptidase 6.)
  genome : 49,052,460 - 49,511,319 (458,860)
  query : 1 - 953 (953/953)
  7 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR000834 : Peptidase M14, carboxypeptidase A
  GO :
    0004181 : Molecular Function : metallocarboxypeptidase activity
    0006508 : Biological Process : proteolysis
    0008270 : Molecular Function : zinc ion binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 17, cyto 14.5, nucl 12.5, extr 5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0213737)

HIX0000566
HIT000353113 ( ENST00000371833 )
  (BEN domain-containing protein 5;)
  genome : 49,193,195 - 49,242,590 (49,396)
  query : 1 - 1,716 (1,716/1,716)
  6 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 20.5, cyto_nucl 15.5, nucl 9.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000566)

HIX0000566
HIT000035463 ( BC011804 )
  (BEN domain-containing protein 5.)
  genome : 49,193,538 - 49,242,407 (48,870)
  query : 1 - 1,190 (1,190/1,219)
  6 exons
  identity = 0.999
  3'(1.000;1.000;0.997;1.000;1.000)5'
  coverage = 0.999
  InterPro :
    IPR018379 : BEN domain
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 16, nucl 14
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000566)

HIX0000566
HIT000033540 ( BC007932 )
  Representative transcript
  (BEN domain-containing protein 5;)
  genome : 49,193,543 - 49,242,590 (49,048)
  query : 4 - 1,371 (1,368/1,394)
  6 exons
  identity = 0.999
  3'(1.000;1.000;0.997;1.000;1.000)5'
  coverage = 0.998
  InterPro :
    IPR018379 : BEN domain
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 20.5, cyto_nucl 15.5, nucl 9.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000566)
  Ortholog candidate  ( -> Evola )
    Mus sp. (Mouse) : BC037633
    Bos sp. (Cow) : BC116004
    Gallus sp. (Chicken) : BX936197
    Canis sp. (Dog) : ENSCAFT00000006327
    Equus sp. (Horse) : ENSECAT00000027051
    Oryzias sp. (Medaka) : ENSORLT00000021413
    Pongo sp. (Orangutan) : ENSPPYT00000001645
    Tetraodon sp. (Tetraodon) : GSTENT00028816001
    Takifugu sp. (Fugu) : SINFRUT00000129720
    Pan sp. (Chimpanzee) : XM_001164459
    Rattus sp. (Rat) : XM_342883
    Danio sp. (Zebrafish) : XM_689435

HIX0000566
HIT000209309 ( NM_024603 )
  (BEN domain-containing protein 5;)
  genome : 49,193,541 - 49,242,547 (49,007)
  query : 1 - 1,327 (1,327/1,342)
  6 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 20.5, cyto_nucl 15.5, nucl 9.5
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000566)

HIX0000566
HIT000580291 ( ENST00000476079 )
  (BEN domain-containing protein 5.)
  genome : 49,193,539 - 49,224,605 (31,067)
  query : 1 - 425 (425/425)
  3 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 21, cyto 6.5, cyto_nucl 4.5, nucl 1.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000566)

HIX0000566
HIT000012063 ( AK055449 )
  (BEN domain-containing protein 5.)
  genome : 49,193,542 - 49,244,275 (50,734)
  query : 1 - 2,053 (2,053/2,053)
  4 exons
  identity = 0.990
  3'(0.995;1.000;0.987)5'
  coverage = 1.000
  InterPro :
    IPR018379 : BEN domain
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 21.5, cyto_nucl 16, cyto_plas 13.5, nucl 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000566)

HIX0000566
HIT000568353 ( ENST00000463562 )
  (BEN domain-containing protein 5.)
  genome : 49,193,542 - 49,242,604 (49,063)
  query : 1 - 1,465 (1,465/1,465)
  6 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 18, cyto_nucl 15, nucl 10
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000566)

HIX0000566
HIT000004924 ( AK021650 )
  (BEN domain-containing protein 5.)
  genome : 49,193,542 - 49,242,503 (48,962)
  query : 1 - 1,364 (1,364/1,364)
  6 exons
  identity = 0.999
  3'(0.995;1.000;0.998;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 18, cyto_nucl 15, nucl 10
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000566)

HIX0000566
HIT000580307 ( ENST00000476096 )
  (BEN domain-containing protein 5.)
  genome : 49,193,545 - 49,224,927 (31,383)
  query : 1 - 527 (527/527)
  2 exons
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 14.5, extr 11, cyto_nucl 10.1667, cyto_plas 9,
    nucl 2.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000566)

HIX0000566
HIT000584420 ( ENST00000480399 )
  (BEN domain-containing protein 5.)
  genome : 49,224,879 - 49,242,641 (17,763)
  query : 1 - 524 (524/524)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 13, cyto_nucl 12.3333, cyto 9, nucl 8.5,
    cyto_pero 5.83333
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000566)

HIX0000566
HIT000593540 ( ENST00000489956 )
  (BEN domain-containing protein 5.)
  genome : 49,226,720 - 49,242,407 (15,688)
  query : 1 - 553 (553/553)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 22.5, cyto_nucl 12.5, extr 6
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000566)

HIX0161503
HIT000553936 ( ENST00000456002 )
  (Hypothetical short protein.)
  genome : 49,513,988 - 49,653,257 (139,270)
  query : 1 - 713 (713/713)
  3 exons
  identity = 1.000
  5'(1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 22, cyto 7.5, cyto_nucl 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0161503)

HIX0023848
HIT000050277 ( AK131006 )
  Representative transcript
  (Hypothetical protein.)
  genome : 49,723,083 - 49,734,966 (11,884)
  query : 2 - 576 (575/576)
  4 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000)3'
  coverage = 0.998
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 21, cyto 5, mito 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023848)

HIX0023848
HIT000518005 ( ENST00000420071 )
  (Hypothetical protein.)
  genome : 49,723,083 - 49,734,957 (11,875)
  query : 1 - 566 (566/566)
  4 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 21, cyto 5, mito 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023848)

HIX0161535
HIT000554995 ( ENST00000457061 )
  (Hypothetical short protein.)
  genome : 49,839,873 - 49,937,757 (97,885)
  query : 1 - 514 (514/514)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0161535)

HIX0214236
HIT000600726 ( ENST00000497451 )
  (Conserved hypothetical protein.)
  genome : 49,992,900 - 50,317,190 (324,291)
  query : 1 - 625 (625/625)
  3 exons
  identity = 1.000
  3'(1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17, mito 10, extr 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0214236)

HIX0028974
HIT000066071 ( AF075049 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 50,156,065 - 50,156,501 (437)
  query : 2 - 438 (437/438)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 0.998
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 27, E.R. 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0028974)

HIX0160723
HIT000526770 ( ENST00000428836 )
  (Conserved hypothetical protein.)
  genome : 50,156,934 - 50,157,195 (262)
  query : 1 - 262 (262/262)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 20, cyto_nucl 6.16667, nucl 5, cyto 5,
    cyto_pero 4.16667
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0160723)

HIX0117466
HIT000603182 ( ENST00000502859 )
  (Conserved hypothetical protein.)
  genome : 50,307,836 - 50,312,072 (4,237)
  query : 33 - 1,966 (1,934/1,966)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 0.984
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31, cyto_nucl 17
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0117466)

HIX0028555
HIT000070249 ( AF119862 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 50,459,990 - 50,461,875 (1,886)
  query : 1 - 1,886 (1,886/1,901)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 9.5, mito 9, cyto_mito 9, cyto 8.5,
    mito_nucl 8.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0028555)
  Ortholog candidate  ( -> Evola )
    Pan sp. (Chimpanzee) : ENSPTRT00000048864

HIX0028555
HIT000546280 ( ENST00000448346 )
  (Conserved hypothetical protein.)
  genome : 50,459,990 - 50,461,874 (1,885)
  query : 1 - 1,885 (1,885/1,885)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 9.5, mito 9, cyto_mito 9, cyto 8.5,
    mito_nucl 8.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0028555)

HIX0160995
HIT000536529 ( ENST00000438595 )
  (Hypothetical protein.)
  genome : 50,482,764 - 50,483,175 (412)
  query : 1 - 412 (412/412)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 9.5, cyto_nucl 9.5, mito 9, cyto 8.5, extr 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0160995)

HIX0023614
HIT000546841 ( ENST00000448907 )
  (ELAV-like protein 4 isoform 5.)
  genome : 50,513,686 - 50,667,540 (153,855)
  query : 1 - 1,951 (1,951/1,951)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 29
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0023614
HIT000561006 ( NM_001144777 )
  (ELAV-like protein 4 isoform 5.)
  genome : 50,513,686 - 50,667,540 (153,855)
  query : 1 - 1,951 (1,951/1,951)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 29
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0023614
HIT000353107 ( ENST00000371827 )
  (ELAV-like protein 4 isoform 4.)
  genome : 50,569,582 - 50,669,442 (99,861)
  query : 1 - 3,775 (3,775/3,775)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0023614
HIT000561005 ( NM_001144776 )
  (ELAV-like protein 4 isoform 4.)
  genome : 50,569,582 - 50,667,540 (97,959)
  query : 1 - 1,873 (1,873/1,873)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0023614
HIT000083464 ( AY033995 )
  (ELAV-like protein 4 isoform 4.)
  genome : 50,569,582 - 50,667,055 (97,474)
  query : 1 - 1,388 (1,388/1,406)
  7 exons
  identity = 0.999
  5'(1.000;1.000;1.000;1.000;1.000;1.000;0.998)3'
  coverage = 1.000
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR002343 : Paraneoplastic encephalomyelitis antigen
    IPR006548 : Splicing factor ELAV/HuD
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
    0003723 : Molecular Function : RNA binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0023614
HIT000568437 ( ENST00000463650 )
  (ELAV-like protein 4 isoform 2.)
  genome : 50,571,362 - 50,610,856 (39,495)
  query : 1 - 489 (489/489)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 14.5, nucl 12, cyto 11, extr 8
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0023614
HIT000561004 ( NM_001144775 )
  (ELAV-like protein 4 isoform 3.)
  genome : 50,571,964 - 50,667,540 (95,577)
  query : 1 - 1,884 (1,884/1,884)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0023614
HIT000083465 ( AY033996 )
  (ELAV-like protein 4 isoform 3.)
  genome : 50,571,964 - 50,667,055 (95,092)
  query : 1 - 1,399 (1,399/1,415)
  7 exons
  identity = 0.999
  5'(1.000;1.000;1.000;1.000;1.000;1.000;0.998)3'
  coverage = 1.000
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR002343 : Paraneoplastic encephalomyelitis antigen
    IPR006548 : Splicing factor ELAV/HuD
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
    0003723 : Molecular Function : RNA binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0023614
HIT000310984 ( ENST00000357083 )
  (ELAV-like protein 4 isoform 3.)
  genome : 50,571,964 - 50,667,071 (95,108)
  query : 1 - 1,415 (1,415/1,415)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0023614
HIT000208499 ( NM_021952 )
  (ELAV-like protein 4; Hu-antigen D; HuD; Paraneoplastic encephalomyelitis antigen HuD;)
  genome : 50,574,594 - 50,667,540 (92,947)
  query : 1 - 2,101 (2,101/2,101)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0023614
HIT000561003 ( NM_001144774 )
  (ELAV-like protein 4 isoform 2.)
  genome : 50,574,594 - 50,667,540 (92,947)
  query : 1 - 2,059 (2,059/2,059)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0023614
HIT000353104 ( ENST00000371824 )
  (ELAV-like protein 4 isoform 2.)
  genome : 50,574,605 - 50,669,458 (94,854)
  query : 1 - 3,966 (3,966/3,966)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0023614
HIT000083466 ( AY033997 )
  (ELAV-like protein 4 isoform 2.)
  genome : 50,574,605 - 50,667,055 (92,451)
  query : 1 - 1,563 (1,563/1,582)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR002343 : Paraneoplastic encephalomyelitis antigen
    IPR006548 : Splicing factor ELAV/HuD
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
    0003723 : Molecular Function : RNA binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0023614
HIT000051610 ( BC036071 )
  (ELAV-like protein 4 isoform 2.)
  genome : 50,574,634 - 50,669,456 (94,823)
  query : 1 - 3,936 (3,936/3,951)
  7 exons
  identity = 0.998
  5'(0.996;1.000;1.000;0.987;0.996;1.000;0.999)3'
  coverage = 1.000
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR002343 : Paraneoplastic encephalomyelitis antigen
    IPR006548 : Splicing factor ELAV/HuD
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
    0003723 : Molecular Function : RNA binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0023614
HIT000083467 ( AY033998 )
  (ELAV-like protein 4; Hu-antigen D; HuD; Paraneoplastic encephalomyelitis antigen HuD;)
  genome : 50,574,638 - 50,667,055 (92,418)
  query : 1 - 1,572 (1,572/1,591)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR002343 : Paraneoplastic encephalomyelitis antigen
    IPR006548 : Splicing factor ELAV/HuD
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
    0003723 : Molecular Function : RNA binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0023614
HIT000353103 ( ENST00000371823 )
  (ELAV-like protein 4; Hu-antigen D; HuD; Paraneoplastic encephalomyelitis antigen HuD;)
  genome : 50,574,638 - 50,667,063 (92,426)
  query : 1 - 1,580 (1,580/1,591)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0023614
HIT000196042 ( M62843 )
  (ELAV-like protein 4; Hu-antigen D; HuD; Paraneoplastic encephalomyelitis antigen HuD;)
  genome : 50,574,769 - 50,667,054 (92,286)
  query : 2 - 1,441 (1,440/1,441)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 0.999
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR002343 : Paraneoplastic encephalomyelitis antigen
    IPR006548 : Splicing factor ELAV/HuD
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
    0003723 : Molecular Function : RNA binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0023614
HIT000493526 ( AK298902 )
  (ELAV-like protein 4 isoform 1.)
  genome : 50,575,288 - 50,666,940 (91,653)
  query : 1 - 1,531 (1,531/1,531)
  7 exons
  identity = 0.999
  5'(0.997;1.000;1.000;1.000;1.000;1.000;0.998)3'
  coverage = 1.000
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR002343 : Paraneoplastic encephalomyelitis antigen
    IPR006548 : Splicing factor ELAV/HuD
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
    0003723 : Molecular Function : RNA binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0023614
HIT000353101 ( ENST00000371821 )
  (ELAV-like protein 4 isoform 1.)
  genome : 50,575,298 - 50,668,726 (93,429)
  query : 1 - 3,349 (3,349/3,349)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0023614
HIT000353099 ( ENST00000371819 )
  (ELAV-like protein 4 isoform 1.)
  genome : 50,575,378 - 50,667,966 (92,589)
  query : 1 - 2,467 (2,467/2,467)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0023614
HIT000493441 ( AK298817 )
  (ELAV-like protein 4 isoform 1.)
  genome : 50,575,479 - 50,667,054 (91,576)
  query : 1 - 1,454 (1,454/1,454)
  7 exons
  identity = 0.999
  5'(1.000;0.996;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR002343 : Paraneoplastic encephalomyelitis antigen
    IPR006548 : Splicing factor ELAV/HuD
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
    0003723 : Molecular Function : RNA binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0023614
HIT000597951 ( ENST00000494555 )
  (ELAV-like protein 4 isoform 4.)
  genome : 50,575,488 - 50,610,850 (35,363)
  query : 1 - 458 (458/458)
  3 exons
  identity = 1.000
  5'(1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 13, cyto_nucl 11.1667, cyto 9.5,
    cyto_pero 7.83333, nucl 5.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0023614
HIT000428519 ( AK309653 )
  (ELAV-like protein 4 isoform 2.)
  genome : 50,575,513 - 50,663,232 (87,720)
  query : 1 - 981 (981/981)
  6 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR002343 : Paraneoplastic encephalomyelitis antigen
    IPR006548 : Splicing factor ELAV/HuD
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
    0003723 : Molecular Function : RNA binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0161504
HIT000554004 ( ENST00000456070 )
  (Conserved hypothetical protein.)
  genome : 50,580,609 - 50,580,954 (346)
  query : 1 - 346 (346/346)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 18.5, cyto_nucl 16, nucl 8.5, extr 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0161504)

HIX0023614
HIT000595788 ( ENST00000492299 )
  (ELAV-like protein 4 isoform 4.)
  genome : 50,610,625 - 50,646,972 (36,348)
  query : 1 - 2,106 (2,106/2,106)
  3 exons
  identity = 1.000
  5'(1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 16.5, cyto 11.5, nucl 10.5, extr 9
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0161124
HIT000540411 ( ENST00000442477 )
  (Hypothetical short protein.)
  genome : 50,639,978 - 50,641,540 (1,563)
  query : 1 - 858 (858/858)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 16.5, cyto_nucl 10, mito 8, extr 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0161124)

HIX0023614
HIT000578954 ( ENST00000474675 )
  (ELAV-like protein 4 isoform 4.)
  genome : 50,642,802 - 50,663,257 (20,456)
  query : 1 - 600 (600/600)
  4 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0023614
HIT000056697 ( BX648050 )
  (Hypothetical short protein.)
  genome : 50,667,119 - 50,669,442 (2,324)
  query : 1 - 2,324 (2,324/2,343)
  1 exon
  identity = 0.999
  5'(0.999)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 12, cyto_nucl 9, extr 8, nucl 6, cyto 6,
    E.R._mito 6, mito_pero 6
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023614)

HIX0161077
HIT000538831 ( ENST00000440897 )
  (Hypothetical short protein.)
  genome : 50,671,756 - 50,688,799 (17,044)
  query : 1 - 250 (250/250)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0161077)

HIX0203470
eHIT000012086 ( ESTsASS_1_2092 )
  Representative transcript
  (Non-protein coding transcript.)
  genome : 50,782,898 - 50,786,792 (3,895)
  query : 1 - 537 (537/537)
  2 exons
  ESTs assembly
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0203470)
  ESTs used for assembly :
    DB044542

HIX0178189
HIT000521398 ( ENST00000423464 )
  (Ribosomal protein S5, eukaryotic/archaeal family protein.)
  genome : 50,791,803 - 50,792,679 (877)
  query : 1 - 877 (877/877)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 16.5, mito 11, cyto_nucl 9
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0178189)

HIX0178189
HIT000512464 ( ENST00000414530 )
  (Ribosomal protein S5, eukaryotic/archaeal family protein.)
  genome : 50,791,942 - 50,792,682 (741)
  query : 1 - 741 (741/741)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 27, mito 2.5, extr 2, E.R._mito 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0178189)

HIX0021249
HIT000210880 ( NM_032785 )
  (Cytosolic carboxypeptidase 6.)
  genome : 48,998,527 - 50,489,626 (1,491,100)
  query : 1 - 2,988 (2,988/2,988)
  14 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 15.5, cyto_nucl 14.5, nucl 8.5, mito 3, cysk 2
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021249)

HIX0021249
HIT000019681 ( AK094826 )
  Representative transcript
  (Cytosolic carboxypeptidase 6.)
  genome : 48,998,527 - 50,489,585 (1,491,059)
  query : 1 - 2,948 (2,948/2,948)
  14 exons
  identity = 0.999
  3'(1.000;0.995;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR000834 : Peptidase M14, carboxypeptidase A
  GO :
    0004181 : Molecular Function : metallocarboxypeptidase activity
    0006508 : Biological Process : proteolysis
    0008270 : Molecular Function : zinc ion binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 13, nucl 12, cyto 12, mito 3, cysk 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021249)
  Ortholog candidate  ( -> Evola )
    Rattus sp. (Rat) : AF291466
    Gallus sp. (Chicken) : BX933390
    Mus sp. (Mouse) : DQ867039
    Equus sp. (Horse) : ENSECAT00000028904
    Monodelphis sp. (Opossum) : ENSMODT00000001660
    Pongo sp. (Orangutan) : ENSPPYT00000001642
    Pan sp. (Chimpanzee) : ENSPTRT00000001365
    Macaca sp. (Macaque) : XM_001110239
    Canis sp. (Dog) : XM_847536

HIX0021249
HIT000353119 ( ENST00000371839 )
  (Cytosolic carboxypeptidase 6.)
  genome : 48,998,527 - 50,489,585 (1,491,059)
  query : 1 - 2,947 (2,947/2,947)
  14 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 15.5, cyto_nucl 14.5, nucl 8.5, mito 3, cysk 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021249)

HIX0021249
HIT000489257 ( AK294633 )
  (Cytosolic carboxypeptidase 6; EC=3.4.17.-; ATP/GTP-binding protein-like 4;)
  genome : 48,999,209 - 50,489,626 (1,490,418)
  query : 1 - 2,278 (2,278/2,278)
  13 exons
  identity = 1.000
  3'(1.000;0.995;1.000;1.000;1.000)5'
  coverage = 1.000
  EC number :
    EC 3.4.17.-
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 20, cyto 5, extr 3, cyto_pero 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021249)

HIX0021249
HIT000489018 ( AK294394 )
  (Cytosolic carboxypeptidase 6.)
  genome : 48,999,405 - 50,489,585 (1,490,181)
  query : 1 - 2,079 (2,079/2,079)
  13 exons
  identity = 0.998
  3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR000834 : Peptidase M14, carboxypeptidase A
  GO :
    0004181 : Molecular Function : metallocarboxypeptidase activity
    0006508 : Biological Process : proteolysis
    0008270 : Molecular Function : zinc ion binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 20.5, cyto_nucl 17.5, cyto 11.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021249)

HIX0021249
HIT000490845 ( AK296221 )
  (Cytosolic carboxypeptidase 6.)
  genome : 48,999,793 - 50,489,626 (1,489,834)
  query : 1 - 1,511 (1,511/1,511)
  12 exons
  identity = 0.994
  3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR000834 : Peptidase M14, carboxypeptidase A
  GO :
    0004181 : Molecular Function : metallocarboxypeptidase activity
    0006508 : Biological Process : proteolysis
    0008270 : Molecular Function : zinc ion binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 16.5, cyto_nucl 12, nucl 4.5, extr 3, mito 3,
    cysk 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021249)

HIX0021249
HIT000353118 ( ENST00000371838 )
  (Cytosolic carboxypeptidase 6.)
  genome : 49,099,880 - 50,489,585 (1,389,706)
  query : 1 - 1,353 (1,353/1,353)
  9 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17.5, cyto_nucl 11, extr 4, nucl 3.5, cysk 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021249)

HIX0021249
HIT000051495 ( BC035739 )
  (Cytosolic carboxypeptidase 6.)
  genome : 49,283,180 - 50,489,572 (1,206,393)
  query : 1 - 1,453 (1,453/1,500)
  7 exons
  identity = 0.999
  3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 14.5, extr 13, cyto_nucl 9, nucl 2.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021249)

HIX0021249
HIT000353116 ( ENST00000371836 )
  (Cytosolic carboxypeptidase 6.)
  genome : 49,283,179 - 50,489,572 (1,206,394)
  query : 1 - 1,454 (1,454/1,454)
  7 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 14.5, extr 13, cyto_nucl 9, nucl 2.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021249)

AC097062.2
49200001-49330421 F +
NCBI

AL645507.7
49330422-49431164 F +
NCBI

AC099788.2
49431165-49577843 F +
NCBI

AC092264.2
49577844-49651284 F +
NCBI

AL590432.9
49651285-49736129 F +
NCBI

AL031294.1
49736130-49818086 F +
NCBI

AL356916.17
49818087-49934997 F +
NCBI

AL445527.6
49934998-49943119 F +
NCBI

AL356789.16
49943120-50042121 F +
NCBI

AL390023.8
50042122-50173258 F +
NCBI

AC105766.2
50173259-50259528 F +
NCBI

AL591602.7
50259529-50407309 F +
NCBI

AL645730.10
50407310-50559011 F +
NCBI

AL731870.2
50559012-50568005 F +
NCBI

AL583843.5
50568006-50629923 F +
NCBI

AL592182.6
50629924-50740796 F +
NCBI

AL596275.10
50740797-50800000 F +
NCBI

bases per tick : kb first site :
main : All Human Genes JIGSAW prediction ESTs assembly
homology : UCSC CCDS Pseudogene.org Conserved regions ( Segmental duplication P.troglodytes P.abelii M.mulatta M.musculus R.norvegicus C.familiaris E.caballus B.taurus M.domestica G.gallus D.rerio O.latipes T.nigroviridis T.rubripes )
gene prediction : FGENESH GenScan HMMgene tRNA
show... : SNPs ESTs(summary) ESTs(detail) CAGE tag(summary) CAGE tag(detail)
sequence viewer : = ( , )