bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0180022
pHIT000001515 ( pHIT000001515 )
Representative transcript
(Conserved hypothetical protein.)
genome : 54,203,342 - 54,203,737 (396)
query : 1 - 396 (396/396)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0180022)
CAGE tag :
H09BA93H0307
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF486579
Equus
sp. (Horse) : XM_001915700
Canis
sp. (Dog) : XM_546702
Bos
sp. (Cow) : XM_615122
Pan
sp. (Chimpanzee) : XR_020189
HIX0000603
HIT000206921 (
NM_018087
)
(Nucleoporin NDC1; hNDC1; Transmembrane protein 48;)
genome : 54,231,135 - 54,304,225 (73,091)
query : 1 - 4,824 (4,824/4,840)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000603)
HIX0000603
HIT000654586 (
NM_001168551
)
(Nucleoporin NDC1; hNDC1; Transmembrane protein 48;)
genome : 54,231,135 - 54,304,225 (73,091)
query : 1 - 4,704 (4,704/4,720)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000603)
HIX0000603
HIT000658679 (
NR_033142
)
(Nucleoporin NDC1; Transmembrane protein 48;)
genome : 54,231,135 - 54,304,225 (73,091)
query : 1 - 4,703 (4,703/4,719)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, E.R. 9, pero 4, lyso 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000603)
HIX0000603
HIT000008724
(
AK025450
)
(Hypothetical short protein.)
genome : 54,231,147 - 54,233,185 (2,039)
query : 1 - 2,039 (2,039/2,055)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 3.5, mito 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000603)
HIX0000603
HIT000352709 (
ENST00000371429
)
(Nucleoporin NDC1; hNDC1; Transmembrane protein 48;)
genome : 54,231,133 - 54,304,533 (73,401)
query : 1 - 5,134 (5,134/5,134)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000603)
HIX0000603
HIT000250330
(
AL354612
)
(Nucleoporin NDC1 isoform 2.)
genome : 54,231,133 - 54,304,108 (72,976)
query : 1 - 4,599 (4,599/4,599)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019049 : Nucleoporin protein Ndc1-Nup
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_nucl 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000603)
HIX0000603
HIT000250331
(
AL354613
)
(Nucleoporin NDC1; hNDC1; Transmembrane protein 48;)
genome : 54,231,133 - 54,304,108 (72,976)
query : 1 - 4,706 (4,706/4,706)
18 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.971;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019049 : Nucleoporin protein Ndc1-Nup
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000603)
HIX0000603
HIT000639046 (
ENST00000540001
)
(Nucleoporin NDC1 isoform 2.)
genome : 54,231,136 - 54,304,225 (73,090)
query : 1 - 4,713 (4,713/4,713)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_nucl 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000603)
HIX0000603
HIT000016306
(
AK091439
)
(Nucleoporin NDC1 isoform 2.)
genome : 54,231,148 - 54,284,674 (53,527)
query : 1 - 2,905 (2,905/2,905)
13 exons
identity = 0.994
3'(1.000;0.993;1.000;1.000;1.000;1.000;0.973;
0.982;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019049 : Nucleoporin protein Ndc1-Nup
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, mito 9.5, mito_pero 6, cyto_nucl 4.5,
cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000603)
HIX0000603
HIT000004067
(
AK001593
)
(Nucleoporin NDC1 isoform 2.)
genome : 54,231,158 - 54,254,881 (23,724)
query : 4 - 2,892 (2,889/2,892)
4 exons
identity = 0.996
3'(0.998;1.000;1.000;0.936)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto_nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000603)
HIX0000603
HIT000005892
(
AK022618
)
(Nucleoporin NDC1 isoform 2.)
genome : 54,231,888 - 54,262,388 (30,501)
query : 5 - 2,227 (2,223/2,227)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR019049 : Nucleoporin protein Ndc1-Nup
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, extr 8, mito_pero 8, cyto 7.5, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000603)
HIX0000603
HIT000489624
(
AK295000
)
(Nucleoporin NDC1 isoform 2.)
genome : 54,233,188 - 54,304,009 (70,822)
query : 1 - 2,435 (2,435/2,435)
18 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019049 : Nucleoporin protein Ndc1-Nup
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000603)
HIX0000603
HIT000497534
(
AK302910
)
(Nucleoporin NDC1 isoform 2.)
genome : 54,233,310 - 54,303,940 (70,631)
query : 1 - 2,107 (2,107/2,107)
16 exons
identity = 1.000
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019049 : Nucleoporin protein Ndc1-Nup
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 14.5, cyto 8, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000603)
HIX0000603
HIT000636378 (
ENST00000537333
)
(Nucleoporin NDC1 isoform 2.)
genome : 54,233,310 - 54,303,940 (70,631)
query : 1 - 2,107 (2,107/2,107)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 14.5, cyto 8, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000603)
HIX0000603
HIT000031412
(
BC003082
)
(Nucleoporin NDC1; hNDC1; Transmembrane protein 48;)
genome : 54,233,389 - 54,304,175 (70,787)
query : 1 - 2,520 (2,520/2,541)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019049 : Nucleoporin protein Ndc1-Nup
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000603)
HIX0000603
HIT000056678
(
BX648031
)
(Nucleoporin NDC1; Transmembrane protein 48;)
genome : 54,233,399 - 54,303,955 (70,557)
query : 2 - 2,170 (2,169/2,188)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;0.984;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019049 : Nucleoporin protein Ndc1-Nup
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, E.R. 9, pero 4, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000603)
HIX0000603
HIT000003743
(
AK001269
)
Representative transcript
(Nucleoporin NDC1; hNDC1; Transmembrane protein 48;)
genome : 54,233,393 - 54,304,108 (70,716)
query : 1 - 2,449 (2,449/2,450)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.996)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000603)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK144734
Danio
sp. (Zebrafish) : BC053915
Pongo
sp. (Orangutan) : CR858497
Canis
sp. (Dog) : ENSCAFT00000030303
Rattus
sp. (Rat) : ENSRNOT00000014275
Takifugu
sp. (Fugu) : SINFRUT00000143256
Gallus
sp. (Chicken) : XM_001235441
Monodelphis
sp. (Opossum) : XM_001380835
Equus
sp. (Horse) : XM_001489053
Pan
sp. (Chimpanzee) : XM_513417
Bos
sp. (Cow) : XM_868081
HIX0000603
HIT000104582 (
ENST00000234725
)
(Nucleoporin NDC1; Transmembrane protein 48;)
genome : 54,233,563 - 54,303,969 (70,407)
query : 1 - 2,019 (2,019/2,019)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, E.R. 9, pero 4, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000603)
HIX0000603
HIT000493533
(
AK298909
)
(Nucleoporin NDC1; Transmembrane protein 48;)
genome : 54,233,563 - 54,303,969 (70,407)
query : 1 - 2,019 (2,019/2,019)
17 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.991;0.996;
1.000;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019049 : Nucleoporin protein Ndc1-Nup
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, E.R. 9, pero 4, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000603)
HIX0000603
HIT000341981
(
DQ141696
)
(Nucleoporin NDC1; hNDC1; Transmembrane protein 48;)
genome : 54,233,643 - 54,303,934 (70,292)
query : 1 - 2,025 (2,025/2,025)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019049 : Nucleoporin protein Ndc1-Nup
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000603)
HIX0116302
HIT000345741 (
ENST00000364133
)
(Non-protein coding transcript.)
genome : 54,236,691 - 54,236,826 (136)
query : 1 - 136 (136/136)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116302)
HIX0000603
HIT000584940 (
ENST00000480952
)
(Nucleoporin NDC1; Transmembrane protein 48;)
genome : 54,284,643 - 54,304,136 (19,494)
query : 1 - 785 (785/785)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000603)
HIX0160859
HIT000531887 (
ENST00000433953
)
(Conserved hypothetical protein.)
genome : 54,307,220 - 54,307,505 (286)
query : 1 - 286 (286/286)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160859)
HIX0000604
HIT000261509
(
BC064590
)
Representative transcript
(Protein YIPF1; YIP1 family member 1;)
genome : 54,317,406 - 54,355,453 (38,048)
query : 1 - 1,804 (1,804/1,876)
11 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006977 : Yip1 domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000604)
HIX0000604
HIT000207519 (
NM_018982
)
(Yip1 domain containing protein.)
genome : 54,317,392 - 54,355,487 (38,096)
query : 1 - 1,852 (1,852/1,873)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000604)
HIX0000604
HIT000659688 (
NR_036639
)
(Yip1 domain containing protein.)
genome : 54,317,392 - 54,355,487 (38,096)
query : 1 - 1,903 (1,903/1,924)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000604)
HIX0000604
HIT000659689 (
NR_036640
)
(Yip1 domain containing protein.)
genome : 54,317,392 - 54,355,487 (38,096)
query : 1 - 1,683 (1,683/1,704)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000604)
HIX0000604
HIT000003298
(
AK000823
)
(Conserved hypothetical protein.)
genome : 54,317,406 - 54,355,452 (38,047)
query : 1 - 1,503 (1,503/1,538)
9 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;0.991;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 12, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000604)
HIX0000604
HIT000034494
(
BC009674
)
(Yip1 domain containing protein.)
genome : 54,317,406 - 54,344,035 (26,630)
query : 1 - 1,151 (1,151/1,181)
6 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;0.979)5'
coverage = 1.000
InterPro :
IPR006977 : Yip1 domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, E.R. 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000604)
HIX0000604
HIT000026593
(
AL713668
)
(Protein YIPF1; YIP1 family member 1;)
genome : 54,317,392 - 54,354,661 (37,270)
query : 32 - 1,614 (1,583/1,620)
10 exons
identity = 0.997
3'(0.995;1.000;0.990;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.977
InterPro :
IPR006977 : Yip1 domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000604)
HIX0000604
HIT000569667 (
ENST00000464950
)
(Yip1 domain containing protein.)
genome : 54,317,392 - 54,354,661 (37,270)
query : 20 - 1,602 (1,583/1,602)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.988
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000604)
HIX0000604
HIT000352679 (
ENST00000371399
)
(Conserved hypothetical protein.)
genome : 54,317,406 - 54,355,452 (38,047)
query : 1 - 1,503 (1,503/1,503)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 12, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000604)
HIX0000604
HIT000102387 (
ENST00000072644
)
(Yip1 domain containing protein.)
genome : 54,317,407 - 54,355,453 (38,047)
query : 1 - 1,803 (1,803/1,803)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000604)
HIX0000604
HIT000494864
(
AK300240
)
(Yip1 domain containing protein.)
genome : 54,320,691 - 54,356,407 (35,717)
query : 1 - 1,196 (1,196/1,196)
10 exons
identity = 0.999
3'(1.000;1.000;0.995;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006977 : Yip1 domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, pero 3, E.R. 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000604)
HIX0000604
HIT000638999 (
ENST00000539954
)
(Yip1 domain containing protein.)
genome : 54,320,691 - 54,356,407 (35,717)
query : 1 - 1,196 (1,196/1,196)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, pero 3, E.R. 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000604)
HIX0000604
HIT000434049
(
AK315183
)
(Yip1 domain containing protein.)
genome : 54,325,737 - 54,355,465 (29,729)
query : 1 - 1,270 (1,270/1,270)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006977 : Yip1 domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000604)
HIX0000604
HIT000573978 (
ENST00000469457
)
(Yip1 domain containing protein.)
genome : 54,331,868 - 54,355,453 (23,586)
query : 1 - 1,009 (1,009/1,009)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000604)
HIX0000604
HIT000584183 (
ENST00000480151
)
(Conserved hypothetical protein.)
genome : 54,331,874 - 54,355,471 (23,598)
query : 1 - 940 (940/940)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 12, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000604)
HIX0000604
HIT000510222 (
ENST00000412288
)
(Yip1 domain containing protein.)
genome : 54,332,428 - 54,355,507 (23,080)
query : 1 - 1,042 (1,042/1,042)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000604)
HIX0000604
HIT000570576 (
ENST00000465897
)
(Yip1 domain containing protein.)
genome : 54,332,477 - 54,355,453 (22,977)
query : 1 - 808 (808/808)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30.5, extr_plas 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000604)
HIX0000604
HIT000577330 (
ENST00000472983
)
(Conserved hypothetical protein.)
genome : 54,343,995 - 54,355,462 (11,468)
query : 1 - 792 (792/792)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 9, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000604)
HIX0028693
HIT000633133 (
ENST00000534069
)
(Type I iodothyronine deiodinase isoform c.)
genome : 54,356,912 - 54,371,833 (14,922)
query : 1 - 710 (710/710)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 6.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000628744 (
ENST00000529589
)
(Type I iodothyronine deiodinase; EC=1.97.1.10; 5DI; DIOI; Type 1 DI; Type-I 5'-deiodinase;)
genome : 54,357,840 - 54,371,967 (14,128)
query : 1 - 688 (688/688)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 7.5, cyto 6.5, extr 6, mito 6, cysk 6,
nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000315172 (
ENST00000361921
)
(Type I iodothyronine deiodinase; EC=1.97.1.10; 5DI; DIOI; Type 1 DI; Type-I 5'-deiodinase;)
genome : 54,359,860 - 54,376,759 (16,900)
query : 1 - 1,861 (1,861/1,861)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, cyto_nucl 8, mito 7, extr 6, nucl 4.5,
mito_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000423577
(
AK290780
)
(Type I iodothyronine deiodinase; EC=1.97.1.10; 5DI; DIOI; Type 1 DI; Type-I 5'-deiodinase;)
genome : 54,359,860 - 54,375,881 (16,022)
query : 1 - 983 (983/983)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.996)3'
coverage = 1.000
EC number :
EC 1.97.1.10
InterPro :
IPR000643 : Iodothyronine deiodinase
GO :
0004800 : Molecular Function : thyroxine 5'-deiodinase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, cyto_nucl 8, mito 7, extr 6, nucl 4.5,
mito_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000038207
(
BC017955
)
(Type I iodothyronine deiodinase isoform d.)
genome : 54,359,861 - 54,376,757 (16,897)
query : 1 - 1,658 (1,658/1,689)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 1.97.1.10
InterPro :
IPR000643 : Iodothyronine deiodinase
IPR008261 : Iodothyronine deiodinase, active site
GO :
0004800 : Molecular Function : thyroxine 5'-deiodinase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, mito_pero 4.33333, cyto_pero 4.33333, pero 4,
cyto 3.5, mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000197804 (
NM_000792
)
(Type I iodothyronine deiodinase; EC=1.97.1.10; 5DI; DIOI; Type 1 DI; Type-I 5'-deiodinase;)
genome : 54,359,861 - 54,376,759 (16,899)
query : 1 - 1,860 (1,860/1,876)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, cyto_nucl 8, mito 7, extr 6, nucl 4.5,
mito_pero 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000320555 (
NM_213593
)
(Type I iodothyronine deiodinase isoform b.)
genome : 54,359,861 - 54,376,759 (16,899)
query : 1 - 1,668 (1,668/1,684)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, cyto_nucl 8, mito 7, extr 6, nucl 4.5,
mito_pero 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000366511 (
NM_001039715
)
(Type I iodothyronine deiodinase isoform c.)
genome : 54,359,861 - 54,376,759 (16,899)
query : 1 - 1,716 (1,716/1,732)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito_pero 5.33333, pero 4.5,
cyto_pero 4.16667, mito 4, E.R. 3, cyto 2.5, plas 2, lyso 2, E.R._golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000366512 (
NM_001039716
)
(Type I iodothyronine deiodinase isoform d.)
genome : 54,359,861 - 54,376,759 (16,899)
query : 1 - 1,660 (1,660/1,676)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, cyto_pero 4.33333, pero 4, mito_pero 3.83333,
cyto 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000123236 (
ENST00000322679
)
(Type I iodothyronine deiodinase isoform d.)
genome : 54,359,861 - 54,376,757 (16,897)
query : 1 - 1,658 (1,658/1,658)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, cyto_pero 4.33333, pero 4, mito_pero 3.83333,
cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000338734
(
BC107170
)
(Type I iodothyronine deiodinase; EC=1.97.1.10; 5DI; DIOI; Type 1 DI; Type-I 5'-deiodinase;)
genome : 54,359,861 - 54,375,984 (16,124)
query : 1 - 1,085 (1,085/1,085)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
InterPro :
IPR000643 : Iodothyronine deiodinase
IPR008261 : Iodothyronine deiodinase, active site
IPR012336 : Thioredoxin-like fold
GO :
0004800 : Molecular Function : thyroxine 5'-deiodinase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito_pero 5.33333, pero 4.5,
cyto_pero 4.16667, mito 4, E.R. 4, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000338735
(
BC107171
)
(Type I iodothyronine deiodinase; EC=1.97.1.10; 5DI; DIOI; Type 1 DI; Type-I 5'-deiodinase;)
genome : 54,359,861 - 54,375,984 (16,124)
query : 1 - 1,085 (1,085/1,085)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
InterPro :
IPR000643 : Iodothyronine deiodinase
IPR008261 : Iodothyronine deiodinase, active site
IPR012336 : Thioredoxin-like fold
GO :
0004800 : Molecular Function : thyroxine 5'-deiodinase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito_pero 5.33333, pero 4.5,
cyto_pero 4.16667, mito 4, E.R. 4, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000624290 (
ENST00000525044
)
(Type I iodothyronine deiodinase isoform d.)
genome : 54,359,862 - 54,375,782 (15,921)
query : 1 - 573 (573/573)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, mito 5.5, mito_pero 4.83333, E.R. 4, pero 3,
cyto_pero 2.83333, plas 2, E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000626266 (
ENST00000527060
)
(Type I iodothyronine deiodinase; EC=1.97.1.10; 5DI; DIOI; Type 1 DI; Type-I 5'-deiodinase;)
genome : 54,359,862 - 54,375,782 (15,921)
query : 1 - 799 (799/799)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, cyto_nucl 8, mito 7, extr 6, nucl 4.5,
mito_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000628112 (
ENST00000528946
)
(Type I iodothyronine deiodinase; EC=1.97.1.10; 5DI; DIOI; Type 1 DI; Type-I 5'-deiodinase;)
genome : 54,359,862 - 54,375,782 (15,921)
query : 1 - 614 (614/614)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, pero 5, cyto_pero 4.83333, mito_pero 4.33333,
cyto 3.5, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000645528
(
FJ002243
)
(Type I iodothyronine deiodinase isoform c.)
genome : 54,359,862 - 54,375,782 (15,921)
query : 1 - 799 (799/799)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.994)3'
coverage = 1.000
EC number :
EC 1.97.1.10
InterPro :
IPR000643 : Iodothyronine deiodinase
GO :
0004800 : Molecular Function : thyroxine 5'-deiodinase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, mito 4.5, mito_pero 4.33333, pero 3,
cyto_pero 2.83333, mito_nucl 2.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000645530
(
FJ002245
)
(Type I iodothyronine deiodinase isoform d.)
genome : 54,359,862 - 54,375,782 (15,921)
query : 1 - 573 (573/573)
3 exons
identity = 0.997
5'(0.996;1.000;0.994)3'
coverage = 1.000
EC number :
EC 1.97.1.10
InterPro :
IPR000643 : Iodothyronine deiodinase
GO :
0004800 : Molecular Function : thyroxine 5'-deiodinase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, mito 4, mito_pero 3.5, plas 2, cyto 2,
cyto_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000645531
(
FJ002246
)
(Type I iodothyronine deiodinase isoform d.)
genome : 54,359,862 - 54,375,782 (15,921)
query : 1 - 114 (114/114)
2 exons
identity = 0.991
5'(1.000;0.974)3'
coverage = 1.000
EC number :
EC 1.97.1.10
SOSUI :
MEMBRANE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000645532
(
FJ002247
)
(Type I iodothyronine deiodinase isoform d.)
genome : 54,359,862 - 54,375,782 (15,921)
query : 1 - 858 (858/858)
2 exons
identity = 0.999
5'(1.000;0.998)3'
coverage = 1.000
EC number :
EC 1.97.1.10
InterPro :
IPR000643 : Iodothyronine deiodinase
GO :
0004800 : Molecular Function : thyroxine 5'-deiodinase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, mito_pero 4, mito 3.5, pero 3.5, plas 1,
nucl 1, cyto 1, E.R. 1, cyto_nucl 1, lyso 1, cyto_plas 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000645533
(
FJ002248
)
(Type I iodothyronine deiodinase; EC=1.97.1.10; 5DI; DIOI; Type 1 DI; Type-I 5'-deiodinase;)
genome : 54,359,862 - 54,375,782 (15,921)
query : 1 - 614 (614/614)
3 exons
identity = 0.998
5'(1.000;1.000;0.994)3'
coverage = 1.000
EC number :
EC 1.97.1.10
InterPro :
IPR000643 : Iodothyronine deiodinase
GO :
0004800 : Molecular Function : thyroxine 5'-deiodinase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, pero 5, cyto_pero 4.83333, mito_pero 4.33333,
cyto 3.5, mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000645534
(
FJ002249
)
(Type I iodothyronine deiodinase; EC=1.97.1.10; 5DI; DIOI; Type 1 DI; Type-I 5'-deiodinase;)
genome : 54,359,862 - 54,375,782 (15,921)
query : 1 - 272 (272/272)
3 exons
identity = 0.989
5'(0.978;0.960;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
InterPro :
IPR000643 : Iodothyronine deiodinase
GO :
0004800 : Molecular Function : thyroxine 5'-deiodinase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11.5, cyto_mito 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000629236 (
ENST00000530084
)
(Type III iodothyronine deiodinase; EC=1.97.1.11; 5DIII; DIOIII; Type 3 DI; Type-III 5'-deiodinase; XL-15;)
genome : 54,359,862 - 54,375,780 (15,919)
query : 1 - 771 (771/771)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.11
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, cyto_nucl 8, mito 7, extr 6, nucl 4.5,
mito_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000645529
(
FJ002244
)
(Type I iodothyronine deiodinase isoform d.)
genome : 54,359,862 - 54,375,780 (15,919)
query : 1 - 771 (771/771)
4 exons
identity = 0.997
5'(1.000;1.000;1.000;0.989)3'
coverage = 1.000
EC number :
EC 1.97.1.10
InterPro :
IPR000643 : Iodothyronine deiodinase
GO :
0004800 : Molecular Function : thyroxine 5'-deiodinase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 3, cyto_pero 2, mito_nucl 2, cyto 1.5,
pero 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000625542 (
ENST00000526329
)
(Type I iodothyronine deiodinase isoform c.)
genome : 54,359,865 - 54,370,527 (10,663)
query : 1 - 545 (545/545)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, cyto_pero 4.33333, pero 4, mito_pero 3.83333,
cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000255464
(
AY560379
)
(Type I iodothyronine deiodinase; EC=1.97.1.10; 5DI; DIOI; Type 1 DI; Type-I 5'-deiodinase;)
genome : 54,359,884 - 54,375,696 (15,813)
query : 1 - 665 (665/665)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
InterPro :
IPR000643 : Iodothyronine deiodinase
GO :
0004800 : Molecular Function : thyroxine 5'-deiodinase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 3, cyto_pero 2, mito_nucl 2, cyto 1.5,
pero 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000255459
(
AY560374
)
(Type I iodothyronine deiodinase; EC=1.97.1.10; 5DI; DIOI; Type 1 DI; Type-I 5'-deiodinase;)
genome : 54,359,884 - 54,375,672 (15,789)
query : 1 - 750 (750/750)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
InterPro :
IPR000643 : Iodothyronine deiodinase
IPR008261 : Iodothyronine deiodinase, active site
IPR012336 : Thioredoxin-like fold
GO :
0004800 : Molecular Function : thyroxine 5'-deiodinase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito_pero 5.33333, pero 4.5,
cyto_pero 4.16667, mito 4, E.R. 4, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000255460
(
AY560375
)
(Type I iodothyronine deiodinase; EC=1.97.1.10; 5DI; DIOI; Type 1 DI; Type-I 5'-deiodinase;)
genome : 54,359,884 - 54,375,672 (15,789)
query : 1 - 558 (558/558)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
InterPro :
IPR000643 : Iodothyronine deiodinase
IPR008261 : Iodothyronine deiodinase, active site
GO :
0004800 : Molecular Function : thyroxine 5'-deiodinase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, E.R._mito 4.83333, E.R. 4.5,
mito_pero 4.16667, plas 4, mito 4, pero 3, cyto_pero 2.83333,
cyto_plas 2.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000255461
(
AY560376
)
(Type I iodothyronine deiodinase isoform d.)
genome : 54,359,884 - 54,375,672 (15,789)
query : 1 - 441 (441/441)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
InterPro :
IPR000643 : Iodothyronine deiodinase
GO :
0004800 : Molecular Function : thyroxine 5'-deiodinase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 3, cyto_pero 2, mito_nucl 2, cyto 1.5,
pero 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000255462
(
AY560377
)
Representative transcript
(Type I iodothyronine deiodinase isoform c.)
genome : 54,359,884 - 54,375,672 (15,789)
query : 1 - 606 (606/606)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
InterPro :
IPR000643 : Iodothyronine deiodinase
GO :
0004800 : Molecular Function : thyroxine 5'-deiodinase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito_pero 5.33333, pero 4.5,
cyto_pero 4.16667, mito 4, E.R. 3, cyto 2.5, plas 2, lyso 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC037080
Danio
sp. (Zebrafish) : BC076008
Bos
sp. (Cow) : BC103447
Macaca
sp. (Macaque) : ENSMMUT00000002011
Monodelphis
sp. (Opossum) : ENSMODT00000027169
Pongo
sp. (Orangutan) : ENSPPYT00000001594
Takifugu
sp. (Fugu) : SINFRUT00000144458
Canis
sp. (Dog) : U11762
Rattus
sp. (Rat) : X57999
Equus
sp. (Horse) : XM_001914852
Pan
sp. (Chimpanzee) : XR_023960
Gallus
sp. (Chicken) : Y11110
HIX0028693
HIT000255463
(
AY560378
)
(Type I iodothyronine deiodinase isoform d.)
genome : 54,359,884 - 54,375,672 (15,789)
query : 1 - 550 (550/550)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
InterPro :
IPR000643 : Iodothyronine deiodinase
IPR008261 : Iodothyronine deiodinase, active site
GO :
0004800 : Molecular Function : thyroxine 5'-deiodinase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, mito_pero 4.33333, cyto_pero 4.33333, pero 4,
cyto 3.5, mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000255465
(
AY560380
)
(Type I iodothyronine deiodinase isoform c.)
genome : 54,359,884 - 54,375,672 (15,789)
query : 1 - 626 (626/626)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000255466
(
AY560381
)
(Type I iodothyronine deiodinase isoform c.)
genome : 54,359,884 - 54,375,672 (15,789)
query : 1 - 406 (406/406)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
InterPro :
IPR000643 : Iodothyronine deiodinase
GO :
0004800 : Molecular Function : thyroxine 5'-deiodinase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, mito_pero 4.33333, pero 4, cyto_pero 3.83333,
mito 3.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000255467
(
AY560382
)
(Type I iodothyronine deiodinase isoform c.)
genome : 54,359,884 - 54,375,672 (15,789)
query : 1 - 667 (667/667)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
InterPro :
IPR000643 : Iodothyronine deiodinase
GO :
0004800 : Molecular Function : thyroxine 5'-deiodinase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, mito 4.5, mito_pero 4.33333, pero 3,
cyto_pero 2.83333, mito_nucl 2.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000255468
(
AY560383
)
(Type I iodothyronine deiodinase; EC=1.97.1.10; 5DI; DIOI; Type 1 DI; Type-I 5'-deiodinase;)
genome : 54,359,884 - 54,375,672 (15,789)
query : 1 - 523 (523/523)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
InterPro :
IPR000643 : Iodothyronine deiodinase
GO :
0004800 : Molecular Function : thyroxine 5'-deiodinase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, mito_pero 4.33333, pero 4, mito 3.5,
cyto_pero 3.33333, cyto 1.5, plas 1, nucl 1, E.R. 1, lyso 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000395786 (
ENST00000388876
)
(Type I iodothyronine deiodinase isoform c.)
genome : 54,359,884 - 54,375,672 (15,789)
query : 1 - 606 (606/606)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito_pero 5.33333, pero 4.5,
cyto_pero 4.16667, mito 4, E.R. 3, cyto 2.5, plas 2, lyso 2, E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000623667 (
ENST00000524406
)
(Type I iodothyronine deiodinase; EC=1.97.1.10; 5DI; DIOI; Type 1 DI; Type-I 5'-deiodinase;)
genome : 54,359,884 - 54,375,672 (15,789)
query : 1 - 626 (626/626)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, cyto_nucl 8, mito 7, extr 6, nucl 4.5,
mito_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000624446 (
ENST00000525202
)
(Type I iodothyronine deiodinase; EC=1.97.1.10; 5DI; DIOI; Type 1 DI; Type-I 5'-deiodinase;)
genome : 54,359,884 - 54,375,672 (15,789)
query : 1 - 558 (558/558)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, cyto_nucl 8, mito 7, extr 6, nucl 4.5,
mito_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000628489 (
ENST00000529329
)
(Type I iodothyronine deiodinase; EC=1.97.1.10; 5DI; DIOI; Type 1 DI; Type-I 5'-deiodinase;)
genome : 54,359,884 - 54,375,672 (15,789)
query : 1 - 523 (523/523)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, mito 6, plas 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0028693
HIT000631595 (
ENST00000532493
)
(Type I iodothyronine deiodinase isoform c.)
genome : 54,359,884 - 54,375,672 (15,789)
query : 1 - 406 (406/406)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.97.1.10
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, mito_pero 4.33333, pero 4, cyto_pero 3.83333,
mito 3.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028693)
HIX0029364
HIT000098134
(
BC045699
)
Representative transcript
(Heat shock protein beta-11; Hspb11; Placental protein 25; PP25;)
genome : 54,385,225 - 54,388,068 (2,844)
query : 1 - 2,844 (2,844/2,859)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 12, nucl 6, extr_plas 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029364)
HIX0000606
HIT000032315
(
BC005245
)
Representative transcript
(Heat shock protein beta-11; Hspb11; Placental protein 25; PP25;)
genome : 54,387,234 - 54,411,288 (24,055)
query : 1 - 601 (601/633)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.995
InterPro :
IPR000421 : Coagulation factor 5/8 C-terminal type domain
IPR008979 : Galactose-binding domain-like
GO :
0007155 : Biological Process : cell adhesion
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 15, cyto 7.5, cyto_nucl 7.5, cysk_plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000606)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK013636
Danio
sp. (Zebrafish) : BC128894
Gallus
sp. (Chicken) : BX935707
Tetraodon
sp. (Tetraodon) : CR714557
Canis
sp. (Dog) : ENSCAFT00000030284
Equus
sp. (Horse) : ENSECAT00000010724
Pongo
sp. (Orangutan) : ENSPPYT00000001593
Rattus
sp. (Rat) : XM_001060588
Macaca
sp. (Macaque) : XM_001113060
Monodelphis
sp. (Opossum) : XM_001364190
Pan
sp. (Chimpanzee) : XM_513418
HIX0000606
HIT000385046
(
AK225916
)
(Heat shock protein beta-11; Hspb11; Placental protein 25; PP25;)
genome : 54,387,234 - 54,405,773 (18,540)
query : 18 - 2,696 (2,679/2,719)
4 exons
identity = 0.998
3'(0.998;1.000;1.000;0.983)5'
coverage = 0.985
InterPro :
IPR000421 : Coagulation factor 5/8 C-terminal type domain
IPR008979 : Galactose-binding domain-like
GO :
0007155 : Biological Process : cell adhesion
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 9.33333, cysk 9,
cyto_plas 6.66667, nucl 5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000606)
HIX0000606
HIT000001850
(
AF100747
)
(Heat shock protein beta-11; Hspb11; Placental protein 25; PP25;)
genome : 54,387,235 - 54,411,269 (24,035)
query : 1 - 580 (580/598)
6 exons
identity = 0.998
3'(1.000;1.000;0.986;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 15, cyto 7.5, cyto_nucl 7.5, cysk_plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000606)
HIX0000606
HIT000243015
(
AF416725
)
(Heat shock protein beta-11; Hspb11; Placental protein 25; PP25;)
genome : 54,387,235 - 54,405,766 (18,532)
query : 1 - 535 (535/552)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000421 : Coagulation factor 5/8 C-terminal type domain
IPR008979 : Galactose-binding domain-like
GO :
0007155 : Biological Process : cell adhesion
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 15, cyto 7.5, cyto_nucl 7.5, cysk_plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000606)
HIX0000606
HIT000243016
(
AF417114
)
(Heat shock protein beta-11; Hspb11; Placental protein 25; PP25;)
genome : 54,387,235 - 54,405,766 (18,532)
query : 1 - 535 (535/552)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000421 : Coagulation factor 5/8 C-terminal type domain
IPR008979 : Galactose-binding domain-like
GO :
0007155 : Biological Process : cell adhesion
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 15, cyto 7.5, cyto_nucl 7.5, cysk_plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000606)
HIX0000606
HIT000102648 (
ENST00000194214
)
(Heat shock protein beta-11; Hspb11; Placental protein 25; PP25;)
genome : 54,387,234 - 54,411,602 (24,369)
query : 1 - 915 (915/915)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 15, cyto 7.5, cyto_nucl 7.5, cysk_plas 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000606)
HIX0000606
HIT000205890 (
NM_016126
)
(Heat shock protein beta-11; Hspb11; Placental protein 25; PP25;)
genome : 54,387,234 - 54,411,288 (24,055)
query : 1 - 601 (601/601)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 15, cyto 7.5, cyto_nucl 7.5, cysk_plas 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000606)
HIX0000606
HIT000593271 (
ENST00000489675
)
(Heat shock protein beta-11; Hspb11; Placental protein 25; PP25;)
genome : 54,387,235 - 54,394,673 (7,439)
query : 1 - 879 (879/879)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 5, nucl 3.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000606)
HIX0000606
HIT000352658 (
ENST00000371378
)
(Heat shock protein beta-11; Hspb11; Placental protein 25; PP25;)
genome : 54,387,236 - 54,411,975 (24,740)
query : 1 - 604 (604/604)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 15, cyto 7.5, cyto_nucl 7.5, cysk_plas 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000606)
HIX0000606
HIT000193066
(
L32869
)
(Heat shock protein beta-11; Hspb11; Placental protein 25; PP25;)
genome : 54,387,383 - 54,395,775 (8,393)
query : 1 - 234 (234/234)
4 exons
identity = 0.996
3'(0.983;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008979 : Galactose-binding domain-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 15.3333, cyto_plas 13.1667,
nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000606)
HIX0000606
HIT000323739
(
X79302
)
(Heat shock protein beta-11; Hspb11; Placental protein 25; PP25;)
genome : 54,387,383 - 54,395,775 (8,393)
query : 1 - 234 (234/234)
4 exons
identity = 0.996
3'(0.983;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008979 : Galactose-binding domain-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 15.3333, cyto_plas 13.1667,
nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000606)
HIX0000606
HIT000352657 (
ENST00000371377
)
(Heat shock protein beta-11; Hspb11; Placental protein 25; PP25;)
genome : 54,389,206 - 54,411,283 (22,078)
query : 1 - 760 (760/760)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, cyto 8.5, cyto_nucl 7, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000606)
HIX0000606
HIT000048143
(
AK128270
)
(Heat shock protein beta-11; Hspb11; Placental protein 25; PP25;)
genome : 54,392,578 - 54,395,648 (3,071)
query : 1 - 3,071 (3,071/3,072)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, extr 11, cyto_nucl 11, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000606)
HIX0000606
HIT000352656 (
ENST00000371376
)
(Heat shock protein beta-11; Hspb11; Placental protein 25; PP25;)
genome : 54,395,170 - 54,405,773 (10,604)
query : 1 - 765 (765/765)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 14, cyto 8.5, cyto_nucl 6.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000606)
HIX0000606
HIT000592508 (
ENST00000488884
)
(Heat shock protein beta-11; Hspb11; Placental protein 25; PP25;)
genome : 54,405,356 - 54,411,275 (5,920)
query : 1 - 463 (463/463)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000606)
HIX0000607
HIT000352650 (
ENST00000371370
)
(Conserved hypothetical protein.)
genome : 54,411,750 - 54,433,841 (22,092)
query : 1 - 2,037 (2,037/2,037)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000607)
HIX0000607
HIT000015748
(
AK090881
)
(Leucine-rich repeat-containing protein 42;)
genome : 54,411,750 - 54,433,836 (22,087)
query : 1 - 2,056 (2,056/2,056)
9 exons
identity = 0.987
5'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
0.988;0.952)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000607)
HIX0000607
HIT000352648 (
ENST00000371368
)
(Conserved hypothetical protein.)
genome : 54,411,758 - 54,423,925 (12,168)
query : 1 - 838 (838/838)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 15.5, nucl 9, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000607)
HIX0000607
HIT000211533 (
NM_052940
)
(Conserved hypothetical protein.)
genome : 54,411,999 - 54,433,840 (21,842)
query : 1 - 1,753 (1,753/1,770)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000607)
HIX0000607
HIT000723647 (
NM_001256409
)
(Conserved hypothetical protein.)
genome : 54,411,999 - 54,433,840 (21,842)
query : 1 - 1,787 (1,787/1,804)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000607)
HIX0000607
HIT000121971 (
ENST00000319223
)
(Conserved hypothetical protein.)
genome : 54,412,026 - 54,433,841 (21,816)
query : 1 - 1,727 (1,727/1,727)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000607)
HIX0000607
HIT000081556
(
AK074521
)
(Leucine-rich repeat-containing protein 42.)
genome : 54,412,026 - 54,433,839 (21,814)
query : 1 - 1,559 (1,559/1,559)
9 exons
identity = 0.994
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.983;0.946)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 16.5, nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000607)
HIX0000607
HIT000542921 (
ENST00000444987
)
(Conserved hypothetical protein.)
genome : 54,412,031 - 54,426,141 (14,111)
query : 1 - 1,044 (1,044/1,044)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15, nucl 9.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000607)
HIX0000607
HIT000082236
(
AK075201
)
(Leucine-rich repeat-containing protein 42;)
genome : 54,412,037 - 54,433,839 (21,803)
query : 1 - 1,714 (1,714/1,714)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000607)
HIX0000607
HIT000020622
(
AK095767
)
Representative transcript
(Leucine-rich repeat-containing protein 42;)
genome : 54,412,080 - 54,433,839 (21,760)
query : 1 - 1,705 (1,705/1,705)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000607)
HIX0000607
HIT000036120
(
BC013101
)
(Leucine-rich repeat-containing protein 42;)
genome : 54,412,160 - 54,433,840 (21,681)
query : 1 - 1,592 (1,592/1,607)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000607)
HIX0000607
HIT000582029 (
ENST00000477905
)
(Conserved hypothetical protein.)
genome : 54,427,626 - 54,433,406 (5,781)
query : 1 - 611 (611/611)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, extr 9, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000607)
HIX0160959
HIT000535344 (
ENST00000437410
)
(RNA recognition motif domain containing protein.)
genome : 54,440,642 - 54,441,704 (1,063)
query : 1 - 1,063 (1,063/1,063)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160959)
HIX0023803
HIT000049238
(
AK129967
)
Representative transcript
(Hypothetical short protein.)
genome : 54,447,917 - 54,452,234 (4,318)
query : 1 - 2,245 (2,245/2,245)
3 exons
identity = 0.997
5'(0.997;0.987;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023803)
HIX0029717
HIT000316783 (
NM_001010978
)
(Low-density lipoprotein receptor class A domain-containing protein 1 isoform 1.)
genome : 54,472,971 - 54,483,859 (10,889)
query : 1 - 2,376 (2,376/2,393)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27.5, extr_plas 15
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029717)
HIX0029717
HIT000725302 (
NM_001276392
)
(Low-density lipoprotein receptor class A domain-containing protein 1 isoform 2.)
genome : 54,472,971 - 54,483,859 (10,889)
query : 1 - 2,195 (2,195/2,212)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9.5, cyto_nucl 9.16667, cyto 5.5,
cyto_pero 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029717)
HIX0029717
HIT000725303 (
NM_001276393
)
(Low-density lipoprotein receptor class A domain-containing protein 1 isoform 3.)
genome : 54,472,971 - 54,483,859 (10,889)
query : 1 - 2,247 (2,247/2,264)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 7.5, cyto_nucl 6, nucl 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029717)
HIX0029717
HIT000725304 (
NM_001276394
)
(Low-density lipoprotein receptor class A domain-containing protein 1 isoform 4.)
genome : 54,472,971 - 54,483,859 (10,889)
query : 1 - 2,109 (2,109/2,126)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8.5, cyto_nucl 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029717)
HIX0029717
HIT000725305 (
NM_001276395
)
(Low-density lipoprotein receptor class A domain-containing protein 1 isoform 3.)
genome : 54,472,971 - 54,483,859 (10,889)
query : 1 - 2,216 (2,216/2,233)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 9, cyto_nucl 8.5, nucl 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029717)
HIX0029717
HIT000337332
(
BC103740
)
(Low-density lipoprotein receptor class A domain-containing protein 1 isoform 4.)
genome : 54,472,976 - 54,483,847 (10,872)
query : 1 - 2,092 (2,092/2,106)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8.5, cyto_nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029717)
HIX0029717
HIT000352642 (
ENST00000371362
)
(Low-density lipoprotein receptor class A domain-containing protein 1 isoform 4.)
genome : 54,474,412 - 54,483,845 (9,434)
query : 1 - 654 (654/654)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8.5, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029717)
HIX0029717
HIT000352640 (
ENST00000371360
)
(Low-density lipoprotein receptor class A domain-containing protein 1 isoform 1.)
genome : 54,474,506 - 54,483,803 (9,298)
query : 1 - 785 (785/785)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27.5, extr_plas 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029717)
HIX0029717
HIT000501514
(
BC140760
)
(Low-density lipoprotein receptor class A domain-containing protein 1 isoform 3.)
genome : 54,474,569 - 54,483,803 (9,235)
query : 1 - 593 (593/593)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 7.5, cyto_nucl 6, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029717)
HIX0029717
HIT000502876
(
BC144466
)
(Low-density lipoprotein receptor class A domain-containing protein 1 isoform 3.)
genome : 54,474,569 - 54,483,803 (9,235)
query : 1 - 593 (593/593)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 7.5, cyto_nucl 6, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029717)
HIX0029717
HIT000503474
(
BC171743
)
(Low-density lipoprotein receptor class A domain-containing protein 1 isoform 3.)
genome : 54,474,569 - 54,483,803 (9,235)
query : 1 - 562 (562/562)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 9, cyto_nucl 8.5, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029717)
HIX0029717
HIT000644973 (
ENST00000545928
)
(Low-density lipoprotein receptor class A domain-containing protein 1 isoform 3.)
genome : 54,474,569 - 54,483,803 (9,235)
query : 1 - 593 (593/593)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 7.5, cyto_nucl 6, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029717)
HIX0029717
HIT000389336
(
BC127708
)
Representative transcript
(Low-density lipoprotein receptor class A domain-containing protein 1 isoform 1.)
genome : 54,474,617 - 54,483,856 (9,240)
query : 1 - 727 (727/727)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27.5, extr_plas 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029717)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : ENSBTAT00000043254
Equus
sp. (Horse) : ENSECAT00000023474
Macaca
sp. (Macaque) : ENSMMUT00000047105
Pongo
sp. (Orangutan) : ENSPPYT00000001590
Rattus
sp. (Rat) : ENSRNOT00000057372
Mus
sp. (Mouse) : NM_001081272
Monodelphis
sp. (Opossum) : XM_001380884
Pan
sp. (Chimpanzee) : XM_513420
Canis
sp. (Dog) : XM_848152
HIX0029717
HIT000389337
(
BC127709
)
(Low-density lipoprotein receptor class A domain-containing protein 1 isoform 2.)
genome : 54,474,617 - 54,483,856 (9,240)
query : 1 - 546 (546/546)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9.5, cyto_nucl 9.16667, cyto 5.5,
cyto_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029717)
HIX0029717
HIT000518553 (
ENST00000420619
)
(Low-density lipoprotein receptor class A domain-containing protein 1 isoform 2.)
genome : 54,474,617 - 54,483,856 (9,240)
query : 1 - 546 (546/546)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9.5, cyto_nucl 9.16667, cyto 5.5,
cyto_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029717)
HIX0000608
HIT000014261
(
AK057652
)
Representative transcript
(Conserved hypothetical protein.)
genome : 54,492,356 - 54,494,172 (1,817)
query : 1 - 1,817 (1,817/1,817)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.3333, cyto 10.5, nucl 8, cyto_pero 6.5,
extr 6, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000608)
HIX0213834
HIT000044840
(
AK124967
)
Representative transcript
(Uncharacterised protein family, TMEM59 protein.)
genome : 54,497,347 - 54,510,615 (13,269)
query : 1 - 2,486 (2,486/2,486)
5 exons
identity = 0.995
3'(0.998;1.000;1.000;1.000;0.993)5'
coverage = 1.000
InterPro :
IPR022065 : Uncharacterised protein family, TMEM59
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 19, extr 6.5, extr_plas 5, plas 2.5, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213834)
HIX0213834
HIT000352624 (
ENST00000371344
)
(Uncharacterised protein family, TMEM59 protein.)
genome : 54,497,349 - 54,510,615 (13,267)
query : 1 - 2,473 (2,473/2,473)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 19, extr 6.5, extr_plas 5, plas 2.5, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213834)
HIX0213834
HIT000574872 (
ENST00000470395
)
(Conserved hypothetical protein.)
genome : 54,497,692 - 54,502,475 (4,784)
query : 1 - 480 (480/480)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213834)
HIX0023795
HIT000048959
(
AK129688
)
Representative transcript
(Conserved hypothetical protein.)
genome : 54,498,799 - 54,500,553 (1,755)
query : 1 - 1,750 (1,750/1,750)
1 exon
identity = 0.992
3'(0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9, nucl 7, extr 6, cyto 6, cyto_pero 5.5, pero 3,
extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023795)
HIX0023795
HIT000124827 (
ENST00000327057
)
(Conserved hypothetical protein.)
genome : 54,498,816 - 54,500,553 (1,738)
query : 1 - 1,737 (1,737/1,737)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9, extr 7, nucl 6, cyto 6, cyto_pero 5.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023795)
HIX0029001
HIT000067235
(
AF086356
)
Representative transcript
(Hypothetical short protein.)
genome : 54,505,495 - 54,505,860 (366)
query : 1 - 366 (366/375)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029001)
HIX0213736
HIT000010600
(
AK027328
)
(Conserved hypothetical protein.)
genome : 54,515,817 - 54,518,427 (2,611)
query : 3 - 1,492 (1,490/1,492)
2 exons
identity = 0.996
3'(0.997;0.996)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213736)
HIX0213736
HIT000081671
(
AK074636
)
Representative transcript
(Conserved hypothetical protein.)
genome : 54,516,254 - 54,519,085 (2,832)
query : 1 - 2,835 (2,835/2,835)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213736)
HIX0000610
HIT000021343
(
AK096488
)
(Transcription elongation factor A N-terminal and central domain-containing protein 2;)
genome : 54,519,260 - 54,578,192 (58,933)
query : 1 - 2,538 (2,538/2,538)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;0.998;1.000)3'
coverage = 1.000
InterPro :
IPR003618 : Transcription elongation factor S-II, central domain
IPR017923 : Transcription factor IIS, N-terminal
GO :
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
0006351 : Biological Process : transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 15, nucl 7, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000610)
HIX0000610
HIT000601499 (
ENST00000498272
)
(Transcription elongation factor A N-terminal and central domain-containing protein 2;)
genome : 54,519,260 - 54,578,192 (58,933)
query : 1 - 2,538 (2,538/2,538)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 15, nucl 7, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000610)
HIX0000610
HIT000013288
(
AK056674
)
Representative transcript
(Transcription elongation factor A N-terminal and central domain-containing protein 2;)
genome : 54,519,274 - 54,565,416 (46,143)
query : 1 - 4,097 (4,097/4,097)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR003618 : Transcription elongation factor S-II, central domain
IPR017923 : Transcription factor IIS, N-terminal
GO :
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
0006351 : Biological Process : transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000610)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK008715
Bos
sp. (Cow) : BC142457
Gallus
sp. (Chicken) : BX931314
Tetraodon
sp. (Tetraodon) : CR680665
Equus
sp. (Horse) : ENSECAT00000006894
Monodelphis
sp. (Opossum) : ENSMODT00000027174
Pongo
sp. (Orangutan) : ENSPPYT00000001588
Rattus
sp. (Rat) : ENSRNOT00000048784
Takifugu
sp. (Fugu) : SINFRUT00000143289
Macaca
sp. (Macaque) : XM_001113562
Pan
sp. (Chimpanzee) : XM_001150928
Danio
sp. (Zebrafish) : XM_690995
Canis
sp. (Dog) : XM_848147
HIX0000610
HIT000104590 (
ENST00000234827
)
(Transcription elongation factor A N-terminal and central domain-containing protein 2;)
genome : 54,519,274 - 54,565,416 (46,143)
query : 1 - 4,097 (4,097/4,097)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000610)
HIX0000610
HIT000214176 (
NM_153035
)
(Transcription elongation factor A N-terminal and central domain-containing protein 2;)
genome : 54,519,274 - 54,565,416 (46,143)
query : 1 - 4,097 (4,097/4,097)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000610)
HIX0000610
HIT000051386
(
BC035374
)
(Transcription elongation factor A N-terminal and central domain-containing protein 2;)
genome : 54,519,341 - 54,562,964 (43,624)
query : 1 - 1,578 (1,578/1,600)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR003618 : Transcription elongation factor S-II, central domain
IPR017923 : Transcription factor IIS, N-terminal
GO :
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
0006351 : Biological Process : transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000610)
HIX0000610
HIT000697108 (
ENST00000585250
)
(Non-protein coding transcript.)
genome : 54,519,752 - 54,519,827 (76)
query : 1 - 76 (76/76)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000610)
HIX0000610
HIT000726005 (
NR_039942
)
(Non-protein coding transcript.)
genome : 54,519,752 - 54,519,827 (76)
query : 1 - 76 (76/76)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000610)
HIX0000610
HIT000352611 (
ENST00000371331
)
(Transcription elongation factor A N-terminal and central domain-containing protein 2;)
genome : 54,519,807 - 54,562,166 (42,360)
query : 1 - 936 (936/936)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 5, extr 3, mito 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000610)
HIX0161172
HIT000541989 (
ENST00000444055
)
(Conserved hypothetical protein.)
genome : 54,555,529 - 54,555,766 (238)
query : 1 - 238 (238/238)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 7, mito 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161172)
HIX0000610
HIT000023698
(
AL049253
)
(Hypothetical short protein.)
genome : 54,562,453 - 54,562,964 (512)
query : 4 - 515 (512/533)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 7, nucl 6, cyto_nucl 6, extr_plas 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000610)
HIX0028576
HIT000074218
(
AF217973
)
Representative transcript
(Conserved hypothetical protein.)
genome : 54,569,968 - 54,571,748 (1,781)
query : 1 - 1,785 (1,785/1,837)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028576)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : ENSPTRT00000016292
HIX0028576
HIT000474892 (
ENST00000391366
)
(Conserved hypothetical protein.)
genome : 54,569,968 - 54,571,750 (1,783)
query : 1 - 1,783 (1,783/1,783)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028576)
HIX0213931
HIT000629211 (
ENST00000530059
)
(Zona pellucida domain containing protein.)
genome : 54,598,747 - 54,605,522 (6,776)
query : 1 - 497 (497/497)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.8333, nucl 13.5, cyto 9,
cyto_pero 6.16667, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213931)
HIX0000611
HIT000025611
(
AL137323
)
Representative transcript
(CUB domain-containing protein 2 precursor.)
genome : 54,604,046 - 54,608,652 (4,607)
query : 1 - 4,609 (4,609/4,622)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 2, cyto 2, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000611)
HIX0213931
HIT000352610 (
ENST00000371330
)
(CUB domain containing protein.)
genome : 54,604,668 - 54,619,443 (14,776)
query : 1 - 2,723 (2,723/2,723)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213931)
HIX0213931
HIT000319869 (
NM_201546
)
(CUB domain containing protein.)
genome : 54,604,668 - 54,618,679 (14,012)
query : 1 - 1,959 (1,959/1,959)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, plas 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213931)
HIX0000612
HIT000007958
(
AK024684
)
Representative transcript
(Conserved hypothetical protein.)
genome : 54,635,332 - 54,637,997 (2,666)
query : 1 - 2,666 (2,666/2,682)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 9.5, cyto_nucl 8.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000612)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : CR860202
HIX0000612
HIT000635106 (
ENST00000536061
)
(Conserved hypothetical protein.)
genome : 54,635,333 - 54,637,997 (2,665)
query : 1 - 2,665 (2,665/2,665)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 9.5, cyto_nucl 8.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000612)
HIX0000613
HIT000087938
(
BC012781
)
(NADH-cytochrome b5 reductase-like.)
genome : 54,638,028 - 54,665,679 (27,652)
query : 1 - 3,316 (3,316/3,337)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.6.2.2
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
InterPro :
IPR019180 : Oxidoreductase-like, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 9.5, cyto_nucl 7.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000613)
HIX0000613
HIT000099057
(
BC049198
)
(Oxidoreductase-like, N-terminal domain containing protein.)
genome : 54,638,028 - 54,661,266 (23,239)
query : 1 - 3,396 (3,396/3,417)
7 exons
identity = 0.999
3'(1.000;1.000;0.992;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019180 : Oxidoreductase-like, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 14, cyto_nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000613)
HIX0000613
HIT000095186
(
BC038388
)
(NADH-cytochrome b5 reductase-like.)
genome : 54,638,028 - 54,665,683 (27,656)
query : 1 - 3,320 (3,320/3,340)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.6.2.2
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
InterPro :
IPR019180 : Oxidoreductase-like, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 9.5, cyto_nucl 7.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000613)
HIX0000613
HIT000365962 (
NM_001031672
)
(NADH:cytochrome b5 reductase (CBR) family protein.)
genome : 54,638,028 - 54,665,746 (27,719)
query : 1 - 3,532 (3,532/3,551)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.6.2.2
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_mito 8, plas 7, nucl 6, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000613)
HIX0000613
HIT000519349 (
ENST00000421415
)
(Oxidoreductase-like, N-terminal domain containing protein.)
genome : 54,638,028 - 54,665,683 (27,656)
query : 1 - 3,320 (3,320/3,339)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 9.5, cyto_nucl 7.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000613)
HIX0000613
HIT000517988 (
ENST00000420054
)
(Oxidoreductase-like, N-terminal domain containing protein.)
genome : 54,638,028 - 54,661,266 (23,239)
query : 1 - 3,396 (3,396/3,415)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 14, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000613)
HIX0000613
HIT000015323
(
AK090456
)
Representative transcript
(NADH-cytochrome b5 reductase-like.)
genome : 54,638,029 - 54,665,684 (27,656)
query : 1 - 5,642 (5,642/5,642)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;0.991;1.000;1.000;0.984;
0.972)5'
coverage = 1.000
EC number :
EC 1.6.2.2
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
InterPro :
IPR008333 : Oxidoreductase, FAD-binding domain
IPR017938 : Riboflavin synthase-like beta-barrel
IPR019180 : Oxidoreductase-like, N-terminal
GO :
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 11, cyto_nucl 10, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000613)
HIX0000613
HIT000594404 (
ENST00000490863
)
(Oxidoreductase-like, N-terminal domain containing protein.)
genome : 54,638,029 - 54,665,684 (27,656)
query : 1 - 5,643 (5,643/5,643)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 11, cyto_nucl 10.5, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000613)
HIX0000613
HIT000517757 (
ENST00000419823
)
(NADH:cytochrome b5 reductase (CBR) family protein.)
genome : 54,638,031 - 54,662,167 (24,137)
query : 1 - 3,434 (3,434/3,434)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_mito 8, plas 7, nucl 6, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000613)
HIX0000613
HIT000483916 (
ENST00000401046
)
(Oxidoreductase-like, N-terminal domain containing protein.)
genome : 54,638,031 - 54,661,266 (23,236)
query : 1 - 3,143 (3,143/3,143)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 14, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000613)
HIX0000613
HIT000261382
(
BC064419
)
(NADH-cytochrome b5 reductase-like.)
genome : 54,638,893 - 54,665,709 (26,817)
query : 1 - 2,640 (2,640/2,678)
8 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.6.2.2
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
InterPro :
IPR008333 : Oxidoreductase, FAD-binding domain
IPR017938 : Riboflavin synthase-like beta-barrel
IPR019180 : Oxidoreductase-like, N-terminal
GO :
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 8.5, extr_plas 8.5, cyto_nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000613)
HIX0000613
HIT000627469 (
ENST00000528287
)
(Oxidoreductase-like, N-terminal domain containing protein.)
genome : 54,638,891 - 54,665,709 (26,819)
query : 1 - 2,642 (2,642/2,642)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 8.5, extr_plas 8.5, cyto_nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000613)
HIX0000613
HIT000633385 (
ENST00000534324
)
(NADH:cytochrome b5 reductase (CBR) family protein.)
genome : 54,640,092 - 54,661,289 (21,198)
query : 1 - 1,148 (1,148/1,148)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_mito 8, plas 7, nucl 6, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000613)
HIX0000613
HIT000112918 (
ENST00000287899
)
(NADH:cytochrome b5 reductase (CBR) family protein.)
genome : 54,640,116 - 54,661,354 (21,239)
query : 1 - 985 (985/985)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, cyto 13.5, nucl 11.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000613)
HIX0000613
HIT000636253 (
ENST00000537208
)
(NADH:cytochrome b5 reductase (CBR) family protein.)
genome : 54,640,292 - 54,665,685 (25,394)
query : 1 - 1,003 (1,003/1,003)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, cyto 13.5, nucl 11.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000613)
HIX0000613
HIT000641782 (
ENST00000542737
)
(NADH:cytochrome b5 reductase (CBR) family protein.)
genome : 54,640,292 - 54,665,685 (25,394)
query : 1 - 1,207 (1,207/1,207)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_mito 8, plas 7, nucl 6, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000613)
HIX0000613
HIT000596965 (
ENST00000493530
)
(Phenol hydroxylase reductase family protein.)
genome : 54,641,218 - 54,656,572 (15,355)
query : 16 - 602 (587/602)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.975
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, pero 5, mito 3, plas 2, cyto 2, lyso 2,
E.R._mito 2, cyto_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000613)
HIX0000613
HIT000044505
(
AK124632
)
(Oxidoreductase FAD/NAD(P)-binding domain containing protein.)
genome : 54,641,225 - 54,645,755 (4,531)
query : 1 - 4,530 (4,530/4,530)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR001433 : Oxidoreductase FAD/NAD(P)-binding
GO :
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 9, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000613)
HIX0000614
HIT000590814 (
ENST00000487096
)
(39S ribosomal protein L37, mitochondrial; L37mt; MRP-L37; 39S ribosomal protein L2, mitochondrial; L2mt; MRP-L2; Precursor;)
genome : 54,649,714 - 54,675,805 (26,092)
query : 1 - 747 (747/747)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13, extr 7, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000614)
HIX0000613
HIT000264555
(
BC071735
)
(Oxidoreductase-like, N-terminal domain containing protein.)
genome : 54,651,826 - 54,665,685 (13,860)
query : 1 - 838 (838/852)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008333 : Oxidoreductase, FAD-binding domain
IPR017938 : Riboflavin synthase-like beta-barrel
IPR019180 : Oxidoreductase-like, N-terminal
GO :
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 8.5, extr_plas 8.5, cyto_nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000613)
HIX0000613
HIT000567143 (
ENST00000462299
)
(Riboflavin synthase-like beta-barrel domain containing protein.)
genome : 54,651,826 - 54,656,510 (4,685)
query : 1 - 455 (455/455)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 12.3333, cyto_plas 11.8333, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000613)
HIX0000613
HIT000601074 (
ENST00000497820
)
(Oxidoreductase-like, N-terminal domain containing protein.)
genome : 54,656,224 - 54,662,077 (5,854)
query : 1 - 679 (679/679)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 9, cyto_nucl 8.5, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000613)
HIX0000614
HIT000007846
(
AK024572
)
Representative transcript
(39S ribosomal protein L37, mitochondrial; L37mt; MRP-L37; 39S ribosomal protein L2, mitochondrial; L2mt; MRP-L2; Precursor;)
genome : 54,665,840 - 54,684,051 (18,212)
query : 1 - 1,478 (1,478/1,509)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.990)3'
coverage = 1.000
InterPro :
IPR010793 : Ribosomal protein L37/S30
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005739 : Cellular Component : mitochondrion
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13.5, mito 5.5, nucl 4,
E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000614)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK009030
Rattus
sp. (Rat) : BC079328
Bos
sp. (Cow) : BC114689
Danio
sp. (Zebrafish) : BC134163
Gallus
sp. (Chicken) : ENSGALT00000038158
Oryzias
sp. (Medaka) : ENSORLT00000009823
Pongo
sp. (Orangutan) : ENSPPYT00000001583
Tetraodon
sp. (Tetraodon) : GSTENT00034610001
Takifugu
sp. (Fugu) : SINFRUT00000130231
Macaca
sp. (Macaque) : XM_001113843
Pan
sp. (Chimpanzee) : XM_001151834
Monodelphis
sp. (Opossum) : XM_001380900
Equus
sp. (Horse) : XM_001488629
Canis
sp. (Dog) : XM_546697
HIX0000614
HIT000206177 (
NM_016491
)
(39S ribosomal protein L37, mitochondrial; L37mt; MRP-L37; 39S ribosomal protein L2, mitochondrial; L2mt; MRP-L2; Precursor;)
genome : 54,665,840 - 54,684,056 (18,217)
query : 1 - 1,483 (1,483/1,487)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13.5, mito 5.5, nucl 4,
E.R._mito 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000614)
HIX0000614
HIT000314156 (
ENST00000360840
)
(39S ribosomal protein L37, mitochondrial; L37mt; MRP-L37; 39S ribosomal protein L2, mitochondrial; L2mt; MRP-L2; Precursor;)
genome : 54,665,840 - 54,684,051 (18,212)
query : 1 - 1,478 (1,478/1,478)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13.5, mito 5.5, nucl 4,
E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000614)
HIX0000614
HIT000009445
(
AK026171
)
(39S ribosomal protein L37, mitochondrial; L37mt; MRP-L37; 39S ribosomal protein L2, mitochondrial; L2mt; MRP-L2; Precursor;)
genome : 54,665,856 - 54,684,055 (18,200)
query : 1 - 1,466 (1,466/1,484)
7 exons
identity = 0.997
5'(1.000;0.995;1.000;1.000;1.000;0.990;0.995)3'
coverage = 1.000
InterPro :
IPR010793 : Ribosomal protein L37/S30
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005739 : Cellular Component : mitochondrion
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12.5, mito 5.5, nucl 3.5,
E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000614)
HIX0000614
HIT000002012
(
AF151069
)
(39S ribosomal protein L37, mitochondrial; L37mt; MRP-L37; 39S ribosomal protein L2, mitochondrial; L2mt; MRP-L2; Precursor;)
genome : 54,665,873 - 54,684,051 (18,179)
query : 1 - 1,438 (1,438/1,466)
7 exons
identity = 0.992
5'(0.974;1.000;1.000;1.000;0.994;0.995;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14, nucl 7.5, mito 2, pero 2,
mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000614)
HIX0000614
HIT000594217 (
ENST00000490670
)
(39S ribosomal protein L37, mitochondrial; L37mt; MRP-L37; 39S ribosomal protein L2, mitochondrial; L2mt; MRP-L2; Precursor;)
genome : 54,665,877 - 54,675,804 (9,928)
query : 1 - 669 (669/669)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 7, cyto_nucl 6.66667, cyto 6.5,
E.R._mito 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000614)
HIX0000614
HIT000077484
(
AF325707
)
(39S ribosomal protein L37, mitochondrial; L37mt; MRP-L37; 39S ribosomal protein L2, mitochondrial; L2mt; MRP-L2; Precursor;)
genome : 54,665,892 - 54,684,049 (18,158)
query : 1 - 1,423 (1,423/1,430)
7 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;0.995;0.985)3'
coverage = 0.995
InterPro :
IPR010793 : Ribosomal protein L37/S30
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005739 : Cellular Component : mitochondrion
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12.5, mito 5.5, nucl 3.5,
E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000614)
HIX0000614
HIT000254370
(
AY421759
)
(39S ribosomal protein L37, mitochondrial; L37mt; MRP-L37; 39S ribosomal protein L2, mitochondrial; L2mt; MRP-L2; Precursor;)
genome : 54,665,892 - 54,684,049 (18,158)
query : 1 - 1,121 (1,121/1,128)
5 exons
identity = 0.996
5'(1.000;1.000;1.000;0.995;0.985)3'
coverage = 0.994
InterPro :
IPR010793 : Ribosomal protein L37/S30
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005739 : Cellular Component : mitochondrion
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, mito_pero 11, nucl 6.5, cyto_nucl 5.5,
cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000614)
HIX0000614
HIT000129992 (
ENST00000336230
)
(39S ribosomal protein L37, mitochondrial; L37mt; MRP-L37; 39S ribosomal protein L2, mitochondrial; L2mt; MRP-L2; Precursor;)
genome : 54,665,892 - 54,684,049 (18,158)
query : 1 - 1,122 (1,122/1,122)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17.5, mito_pero 10, nucl 7.5, cyto_nucl 6.5,
cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000614)
HIX0000614
HIT000029302
(
BC000041
)
(39S ribosomal protein L37, mitochondrial; L37mt; MRP-L37; 39S ribosomal protein L2, mitochondrial; L2mt; MRP-L2; Precursor;)
genome : 54,665,895 - 54,684,051 (18,157)
query : 1 - 1,423 (1,423/1,456)
7 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;1.000;1.000;0.995)3'
coverage = 1.000
InterPro :
IPR010793 : Ribosomal protein L37/S30
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005739 : Cellular Component : mitochondrion
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13.5, mito 5.5, nucl 4,
E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000614)
HIX0000614
HIT000481437 (
ENST00000398219
)
(39S ribosomal protein L37, mitochondrial; L37mt; MRP-L37; 39S ribosomal protein L2, mitochondrial; L2mt; MRP-L2; Precursor;)
genome : 54,675,619 - 54,686,603 (10,985)
query : 1 - 868 (868/868)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, mito 10, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000614)
HIX0160532
HIT000520692 (
ENST00000422758
)
(Hypothetical short protein.)
genome : 54,690,181 - 54,691,156 (976)
query : 1 - 390 (390/390)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160532)
HIX0213866
HIT000628098 (
ENST00000528930
)
(Conserved hypothetical protein.)
genome : 54,692,190 - 54,694,507 (2,318)
query : 1 - 862 (862/862)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 11, nucl 10.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213866)
HIX0213866
HIT000066964
(
AF086085
)
(Conserved hypothetical protein.)
genome : 54,692,355 - 54,694,451 (2,097)
query : 1 - 641 (641/650)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 11.5, nucl 10.5, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213866)
HIX0213866
HIT000555466_02 (
ENST00000457532
)
(Sequence-specific single-strand DNA-binding protein family protein.)
genome : 54,692,577 - 54,872,050 (179,474)
query : 1 - 1,731 (1,731/1,731)
18 exons
identity = 0.969
3'(0.981;0.980;1.000;1.000;0.774;0.964;0.972;
1.000;0.985;1.000;0.985;0.967;1.000;1.000;
0.976;1.000;0.932;0.951)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, cyto 15, nucl 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213866)
HIX0213866
HIT000311316_01 (
ENST00000357475
)
(Sequence-specific single-strand DNA-binding protein family protein.)
genome : 54,692,593 - 54,871,896 (179,304)
query : 1 - 1,533 (1,533/1,533)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213866)
HIX0022620
HIT000007157
(
AK023883
)
Representative transcript
(Conserved hypothetical protein.)
genome : 54,701,807 - 54,720,611 (18,805)
query : 1 - 3,107 (3,107/3,107)
3 exons
identity = 0.952
5'(0.995;0.537;0.777)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 12, cyto_nucl 10.5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022620)
HIX0022620
HIT000242818
(
AF176918
)
(Conserved hypothetical protein.)
genome : 54,703,710 - 54,704,736 (1,027)
query : 1 - 1,028 (1,028/1,072)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto_nucl 6, nucl 4.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022620)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000001582
Pan
sp. (Chimpanzee) : ENSPTRT00000059163
HIX0022620
HIT000314616 (
ENST00000361350
)
(Conserved hypothetical protein.)
genome : 54,703,710 - 54,704,736 (1,027)
query : 1 - 1,027 (1,027/1,027)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto_nucl 6, nucl 4.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022620)
HIX0213866
HIT000542467 (
ENST00000444533
)
(Conserved hypothetical protein.)
genome : 54,704,662 - 54,717,533 (12,872)
query : 1 - 560 (560/560)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 16.5, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213866)
HIX0213866
HIT000518055 (
ENST00000420121
)
(Conserved hypothetical protein.)
genome : 54,704,769 - 54,722,939 (18,171)
query : 1 - 593 (593/593)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 13, cyto 10, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213866)
HIX0213866
HIT000629763 (
ENST00000530618
)
(Conserved hypothetical protein.)
genome : 54,708,529 - 54,717,344 (8,816)
query : 1 - 524 (524/524)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 12.5, nucl 9.5, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213866)
HIX0213866
HIT000632295 (
ENST00000533209
)
(Conserved hypothetical protein.)
genome : 54,708,862 - 54,792,145 (83,284)
query : 1 - 552 (552/552)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.5, nucl 11, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213866)
HIX0213866
HIT000625208 (
ENST00000525990
)
(Conserved hypothetical protein.)
genome : 54,708,910 - 54,879,152 (170,243)
query : 1 - 701 (701/701)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14, extr 9, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213866)
HIX0213866
HIT000627958 (
ENST00000528787
)
(Conserved hypothetical protein.)
genome : 54,708,945 - 54,801,554 (92,610)
query : 1 - 577 (577/577)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 12, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213866)
HIX0029424
HIT000524835 (
ENST00000426901
)
(Hypothetical protein.)
genome : 54,751,078 - 54,753,044 (1,967)
query : 1 - 1,111 (1,111/1,111)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 8, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029424)
HIX0000616
HIT000003512
(
AK001038
)
Representative transcript
(Conserved hypothetical protein.)
genome : 54,844,988 - 54,846,746 (1,759)
query : 1 - 1,759 (1,759/1,759)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000616)
HIX0213866
HIT000389485
(
BC127866
)
(Sequence-specific single-strand DNA-binding protein family protein.)
genome : 54,867,531 - 54,871,771 (4,241)
query : 2 - 376 (375/399)
4 exons
identity = 0.973
3'(0.989;1.000;1.000;0.941)5'
coverage = 0.940
InterPro :
IPR006594 : LIS1 homology motif
IPR008116 : Sequence-specific single-strand DNA-binding protein
GO :
0003697 : Molecular Function : single-stranded DNA binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 8, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213866)
HIX0213866
HIT000389484
(
BC127865
)
Representative transcript
(Sequence-specific single-strand DNA-binding protein family protein.)
genome : 54,867,531 - 54,871,771 (4,241)
query : 1 - 369 (369/392)
4 exons
identity = 0.989
3'(0.989;1.000;1.000;0.979)5'
coverage = 0.941
InterPro :
IPR006594 : LIS1 homology motif
IPR008116 : Sequence-specific single-strand DNA-binding protein
GO :
0003697 : Molecular Function : single-stranded DNA binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 8, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213866)
HIX0213866
HIT000546506 (
ENST00000448572
)
(Conserved hypothetical protein.)
genome : 54,878,381 - 54,879,139 (759)
query : 1 - 454 (454/454)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213866)
HIX0161250
HIT000545084 (
ENST00000447150
)
(Hypothetical short protein.)
genome : 54,881,929 - 54,886,533 (4,605)
query : 1 - 289 (289/289)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161250)
HIX0203626
HIT000455367_06
(
DQ588836
)
Representative transcript
(Non-protein coding transcript.)
genome : 54,914,745 - 54,914,774 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203626)
HIX0160842
HIT000531311 (
ENST00000433377
)
(Hypothetical protein.)
genome : 54,982,085 - 54,982,932 (848)
query : 1 - 683 (683/683)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160842)
HIX0161176
HIT000542074 (
ENST00000444140
)
(Conserved hypothetical protein.)
genome : 54,990,497 - 54,990,604 (108)
query : 1 - 108 (108/108)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161176)
HIX0203842
HIT000616240 (
ENST00000516837
)
(Non-protein coding transcript.)
genome : 54,991,059 - 54,991,126 (68)
query : 1 - 68 (68/68)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203842)
HIX0160697
HIT000525851 (
ENST00000427917
)
(RNA recognition motif domain containing protein.)
genome : 55,002,469 - 55,003,431 (963)
query : 1 - 963 (963/963)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160697)
HIX0000617
HIT000015979
(
AK091112
)
(Acyl-coenzyme A thioesterase 11 isoform 2.)
genome : 55,007,930 - 55,075,797 (67,868)
query : 1 - 2,875 (2,875/2,875)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
EC number :
EC 3.1.2.-
InterPro :
IPR002913 : START domain
IPR006683 : Thioesterase superfamily
IPR023393 : START-like domain
IPR029069 : HotDog domain
GO :
0008289 : Molecular Function : lipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto_mito 11.5, cyto_nucl 9.83333, cyto 9.5,
nucl 8, mito_pero 6.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000617)
HIX0000617
HIT000585187 (
ENST00000481208
)
(Acyl-coenzyme A thioesterase 11 isoform 2.)
genome : 55,007,930 - 55,075,797 (67,868)
query : 1 - 2,875 (2,875/2,875)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.1.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto_mito 11.5, cyto_nucl 9.83333, cyto 9.5,
nucl 8, mito_pero 6.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000617)
HIX0000617
HIT000205535 (
NM_015547
)
(Acyl-coenzyme A thioesterase 11; Acyl-CoA thioesterase 11; EC=3.1.2.-; Acyl-CoA thioester hydrolase 11; Adipose-associated thioesterase; Brown fat-inducible thioesterase; BFIT;)
genome : 55,013,807 - 55,100,417 (86,611)
query : 1 - 2,015 (2,015/2,015)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 12.5, cyto_nucl 10, cyto 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000617)
HIX0000617
HIT000213390 (
NM_147161
)
(Acyl-coenzyme A thioesterase 11; Acyl-CoA thioesterase 11; EC=3.1.2.-; Acyl-CoA thioester hydrolase 11; Adipose-associated thioesterase; Brown fat-inducible thioesterase; BFIT;)
genome : 55,013,807 - 55,076,005 (62,199)
query : 1 - 3,181 (3,181/3,181)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, nucl 10.5, cyto_nucl 9, cyto 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000617)
HIX0000617
HIT000030471
(
BC001517
)
(Acyl-coenzyme A thioesterase 11; Acyl-CoA thioesterase 11; EC=3.1.2.-; Acyl-CoA thioester hydrolase 11; Adipose-associated thioesterase; Brown fat-inducible thioesterase; BFIT;)
genome : 55,013,893 - 55,064,514 (50,622)
query : 1 - 2,433 (2,433/2,455)
8 exons
identity = 0.999
5'(1.000;0.993;0.995;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
EC number :
EC 3.1.2.-
InterPro :
IPR006683 : Thioesterase superfamily
IPR029069 : HotDog domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 9.5, cyto_nucl 9, cyto_pero 7.66667,
nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000617)
HIX0000617
HIT000601460 (
ENST00000498228
)
(Acyl-coenzyme A thioesterase 11; Acyl-CoA thioesterase 11; EC=3.1.2.-; Acyl-CoA thioester hydrolase 11; Adipose-associated thioesterase; Brown fat-inducible thioesterase; BFIT;)
genome : 55,013,893 - 55,064,514 (50,622)
query : 1 - 2,433 (2,433/2,450)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.1.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_pero 6.33333, cyto 6, cyto_nucl 4.5,
pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000617)
HIX0000617
HIT000352596 (
ENST00000371316
)
(Acyl-coenzyme A thioesterase 11; Acyl-CoA thioesterase 11; EC=3.1.2.-; Acyl-CoA thioester hydrolase 11; Adipose-associated thioesterase; Brown fat-inducible thioesterase; BFIT;)
genome : 55,013,901 - 55,104,865 (90,965)
query : 1 - 6,369 (6,369/6,369)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 12.5, cyto_nucl 10, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000617)
HIX0000617
HIT000007211
(
AK023937
)
(Acyl-coenzyme A thioesterase 11; Acyl-CoA thioesterase 11; EC=3.1.2.-; Acyl-CoA thioester hydrolase 11; Adipose-associated thioesterase; Brown fat-inducible thioesterase; BFIT;)
genome : 55,013,901 - 55,076,000 (62,100)
query : 1 - 3,082 (3,082/3,082)
16 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.1.2.-
InterPro :
IPR002913 : START domain
IPR006683 : Thioesterase superfamily
IPR023393 : START-like domain
IPR029069 : HotDog domain
GO :
0008289 : Molecular Function : lipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, nucl 10.5, cyto_nucl 9, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000617)
HIX0000617
HIT000136374 (
ENST00000343744
)
(Acyl-coenzyme A thioesterase 11; Acyl-CoA thioesterase 11; EC=3.1.2.-; Acyl-CoA thioester hydrolase 11; Adipose-associated thioesterase; Brown fat-inducible thioesterase; BFIT;)
genome : 55,013,901 - 55,076,000 (62,100)
query : 1 - 3,082 (3,082/3,082)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, nucl 10.5, cyto_nucl 9, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000617)
HIX0000617
HIT000331350
(
AK223570
)
(Acyl-coenzyme A thioesterase 11 isoform 2.)
genome : 55,013,901 - 55,074,883 (60,983)
query : 1 - 1,965 (1,965/1,965)
16 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;0.982;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.2.-
InterPro :
IPR002913 : START domain
IPR006683 : Thioesterase superfamily
IPR023393 : START-like domain
IPR029069 : HotDog domain
GO :
0008289 : Molecular Function : lipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20.5, cyto_mito 13.5, cyto_nucl 7.33333,
nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000617)
HIX0000617
HIT000000432
(
AB014607
)
Representative transcript
(Acyl-coenzyme A thioesterase 11; Acyl-CoA thioesterase 11; EC=3.1.2.-; Acyl-CoA thioester hydrolase 11; Adipose-associated thioesterase; Brown fat-inducible thioesterase; BFIT;)
genome : 55,013,912 - 55,104,865 (90,954)
query : 1 - 6,359 (6,359/6,359)
17 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993)3'
coverage = 1.000
EC number :
EC 3.1.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 12.5, cyto_nucl 10, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000617)
Ortholog candidate ( ->
Evola
)
Oryzias
sp. (Medaka) : AB435956
Mus
sp. (Mouse) : AK038546
Danio
sp. (Zebrafish) : BC071437
Danio
sp. (Zebrafish) : BC095856
Bos
sp. (Cow) : BC150117
Pongo
sp. (Orangutan) : CR857580
Equus
sp. (Horse) : ENSECAT00000000306
Monodelphis
sp. (Opossum) : ENSMODT00000038585
Rattus
sp. (Rat) : ENSRNOT00000010396
Tetraodon
sp. (Tetraodon) : GSTENT00034609001
Takifugu
sp. (Fugu) : SINFRUT00000144452
Macaca
sp. (Macaque) : XM_001113972
Pan
sp. (Chimpanzee) : XM_001152717
Gallus
sp. (Chicken) : XM_426664
Canis
sp. (Dog) : XM_546696
HIX0000617
HIT000334819
(
BC093844
)
(Acyl-coenzyme A thioesterase 11; Acyl-CoA thioesterase 11; EC=3.1.2.-; Acyl-CoA thioester hydrolase 11; Adipose-associated thioesterase; Brown fat-inducible thioesterase; BFIT;)
genome : 55,013,941 - 55,074,818 (60,878)
query : 1 - 1,860 (1,860/1,860)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.2.-
InterPro :
IPR002913 : START domain
IPR006683 : Thioesterase superfamily
IPR023393 : START-like domain
IPR029069 : HotDog domain
GO :
0008289 : Molecular Function : lipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, nucl 10.5, cyto_nucl 9, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000617)
HIX0000617
HIT000334821
(
BC093846
)
(Acyl-coenzyme A thioesterase 11; Acyl-CoA thioesterase 11; EC=3.1.2.-; Acyl-CoA thioester hydrolase 11; Adipose-associated thioesterase; Brown fat-inducible thioesterase; BFIT;)
genome : 55,013,941 - 55,074,818 (60,878)
query : 1 - 1,860 (1,860/1,860)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.2.-
InterPro :
IPR002913 : START domain
IPR006683 : Thioesterase superfamily
IPR023393 : START-like domain
IPR029069 : HotDog domain
GO :
0008289 : Molecular Function : lipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, nucl 10.5, cyto_nucl 9, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000617)
HIX0000617
HIT000079318
(
AF416922
)
(Acyl-coenzyme A thioesterase 11; Acyl-CoA thioesterase 11; EC=3.1.2.-; Acyl-CoA thioester hydrolase 11; Adipose-associated thioesterase; Brown fat-inducible thioesterase; BFIT;)
genome : 55,013,983 - 55,074,795 (60,813)
query : 23 - 1,817 (1,795/1,818)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.987
EC number :
EC 3.1.2.-
InterPro :
IPR002913 : START domain
IPR006683 : Thioesterase superfamily
IPR023393 : START-like domain
IPR029069 : HotDog domain
GO :
0008289 : Molecular Function : lipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, nucl 10.5, cyto_nucl 9, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000617)
HIX0000617
HIT000079317
(
AF416921
)
(Acyl-coenzyme A thioesterase 11; Acyl-CoA thioesterase 11; EC=3.1.2.-; Acyl-CoA thioester hydrolase 11; Adipose-associated thioesterase; Brown fat-inducible thioesterase; BFIT;)
genome : 55,013,983 - 55,100,417 (86,435)
query : 19 - 1,857 (1,839/1,857)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.990
EC number :
EC 3.1.2.-
InterPro :
IPR002913 : START domain
IPR006683 : Thioesterase superfamily
IPR023393 : START-like domain
IPR029069 : HotDog domain
GO :
0008289 : Molecular Function : lipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 12.5, cyto_nucl 10, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000617)
HIX0000617
HIT000583881 (
ENST00000479837
)
(Acyl-coenzyme A thioesterase 11; Acyl-CoA thioesterase 11; EC=3.1.2.-; Acyl-CoA thioester hydrolase 11; Adipose-associated thioesterase; Brown fat-inducible thioesterase; BFIT;)
genome : 55,062,937 - 55,065,331 (2,395)
query : 1 - 515 (515/515)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, extr 10, nucl 9, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000617)
HIX0000618
HIT000252673
(
AY358629
)
(Protein FAM151A.)
genome : 55,074,850 - 55,089,186 (14,337)
query : 1 - 1,967 (1,967/2,025)
8 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR019356 : Protein of unknown function DUF2181
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 9, lyso 8, E.R._golg 8, extr 7, golg 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000618)
HIX0000618
HIT000265144
(
BC073921
)
(Protein FAM151A.)
genome : 55,074,854 - 55,075,419 (566)
query : 1 - 566 (566/614)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
InterPro :
IPR019356 : Protein of unknown function DUF2181
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto_nucl 8, cyto 7, mito_pero 7, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000618)
HIX0000618
HIT000039015
(
BC020874
)
(Protein FAM151A.)
genome : 55,074,854 - 55,089,198 (14,345)
query : 1 - 1,975 (1,975/2,004)
8 exons
identity = 0.998
3'(0.999;1.000;1.000;1.000;1.000;0.993;0.993;
1.000)5'
coverage = 1.000
InterPro :
IPR019356 : Protein of unknown function DUF2181
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 8, E.R. 8, lyso 8, golg 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000618)
HIX0000618
HIT000037438
(
BC015993
)
(Protein FAM151A.)
genome : 55,074,854 - 55,089,198 (14,345)
query : 5 - 1,418 (1,414/1,445)
7 exons
identity = 0.999
3'(1.000;0.983;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR019356 : Protein of unknown function DUF2181
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, E.R. 4, golg 4, E.R._golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000618)
HIX0000618
HIT000215392 (
NM_176782
)
(Protein FAM151A.)
genome : 55,074,850 - 55,089,200 (14,351)
query : 1 - 1,981 (1,981/1,998)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 9, lyso 8, E.R._golg 8, extr 7, golg 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000618)
HIX0000618
HIT000016768
(
AK091901
)
Representative transcript
(Protein FAM151A.)
genome : 55,074,855 - 55,089,229 (14,375)
query : 1 - 2,005 (2,005/2,005)
8 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;0.994;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR019356 : Protein of unknown function DUF2181
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 9, lyso 8, E.R._golg 8, extr 7, golg 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000618)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC026682
Rattus
sp. (Rat) : BC081977
Pongo
sp. (Orangutan) : CR857752
Bos
sp. (Cow) : ENSBTAT00000026385
Danio
sp. (Zebrafish) : ENSDART00000081026
Equus
sp. (Horse) : ENSECAT00000026269
Macaca
sp. (Macaque) : XM_001114061
Pan
sp. (Chimpanzee) : XM_001152969
Monodelphis
sp. (Opossum) : XM_001381487
Canis
sp. (Dog) : XM_546695
HIX0000618
HIT000116097 (
ENST00000302250
)
(Protein FAM151A.)
genome : 55,074,855 - 55,089,229 (14,375)
query : 1 - 2,005 (2,005/2,005)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 9, lyso 8, E.R._golg 8, extr 7, golg 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000618)
HIX0000618
HIT000352584 (
ENST00000371304
)
(Protein FAM151A.)
genome : 55,074,855 - 55,089,229 (14,375)
query : 1 - 1,446 (1,446/1,446)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, E.R. 4, golg 4, E.R._golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000618)
HIX0000617
HIT000549836 (
ENST00000451902
)
(Protein FAM151A.)
genome : 55,074,863 - 55,075,796 (934)
query : 1 - 480 (480/480)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000617)
HIX0000617
HIT000026648
(
AL713723
)
(Protein FAM151A.)
genome : 55,075,282 - 55,077,102 (1,821)
query : 1 - 1,821 (1,821/1,836)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6.5, cyto_nucl 6.5, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000617)
HIX0160351
HIT000514053 (
ENST00000416119
)
(Hypothetical short protein.)
genome : 55,087,150 - 55,094,111 (6,962)
query : 1 - 623 (623/623)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 8.5, cyto_nucl 8.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160351)
HIX0213764
HIT000582215 (
ENST00000478097
)
(Conserved hypothetical protein.)
genome : 55,107,463 - 55,136,501 (29,039)
query : 1 - 640 (640/640)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 12, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213764)
HIX0213764
HIT000018139
(
AK093272
)
Representative transcript
(Conserved hypothetical protein.)
genome : 55,107,474 - 55,129,728 (22,255)
query : 1 - 1,805 (1,805/1,805)
4 exons
identity = 0.997
5'(0.994;1.000;0.997;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 15.5, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213764)
HIX0213764
HIT000577333 (
ENST00000472987
)
(Conserved hypothetical protein.)
genome : 55,107,474 - 55,129,728 (22,255)
query : 1 - 1,805 (1,805/1,805)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 15.5, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213764)
HIX0213794
HIT000091701
(
BC029191
)
Representative transcript
(Maestro heat-like repeat-containing protein family member 7.)
genome : 55,148,425 - 55,175,935 (27,511)
query : 1 - 1,567 (1,567/1,613)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR011989 : Armadillo-like helical
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 5.5, E.R._mito 5, cyto_pero 4, cyto 3.5,
nucl 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213794)
HIX0213794
HIT000024802
(
AL117640
)
(Conserved hypothetical protein.)
genome : 55,151,938 - 55,161,455 (9,518)
query : 3 - 731 (729/748)
3 exons
identity = 0.997
5'(0.989;1.000;1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 11, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213794)
HIX0213794
HIT000596968 (
ENST00000493533
)
(Conserved hypothetical protein.)
genome : 55,151,938 - 55,161,455 (9,518)
query : 1 - 729 (729/729)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 7, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213794)
HIX0213794
HIT000048094
(
AK128221
)
(Maestro heat-like repeat-containing protein family member 7.)
genome : 55,162,865 - 55,175,939 (13,075)
query : 1 - 4,221 (4,221/4,221)
7 exons
identity = 0.997
5'(0.998;0.994;0.994;0.992;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 9, cyto_nucl 8.5, nucl 6, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213794)
HIX0213794
HIT000352567 (
ENST00000371287
)
(Armadillo-like helical domain containing protein.)
genome : 55,162,865 - 55,175,939 (13,075)
query : 1 - 4,216 (4,216/4,216)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 9, cyto_nucl 8.5, nucl 6, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213794)
HIX0023698
HIT000044528
(
AK124655
)
Representative transcript
(PDZ and LIM domain protein 5 isoform i.)
genome : 55,176,390 - 55,178,687 (2,298)
query : 1 - 2,298 (2,298/2,298)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 10, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023698)
HIX0213727
HIT000008798
(
AK025524
)
(Tetratricopeptide repeat protein 4; TPR repeat protein 4;)
genome : 55,181,495 - 55,208,327 (26,833)
query : 1 - 2,392 (2,392/2,483)
10 exons
identity = 0.998
5'(1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 16.8333, cyto_mito 13.1667,
nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213727)
HIX0213727
HIT000201365 (
NM_004623
)
(Tetratricopeptide repeat protein 4; TPR repeat protein 4;)
genome : 55,181,495 - 55,208,330 (26,836)
query : 1 - 2,395 (2,395/2,395)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 16.8333, cyto_mito 13.1667,
nucl 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213727)
HIX0213727
HIT000352561 (
ENST00000371281
)
(Tetratricopeptide repeat protein 4; TPR repeat protein 4;)
genome : 55,181,495 - 55,208,330 (26,836)
query : 1 - 2,395 (2,395/2,395)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 16.8333, cyto_mito 13.1667,
nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213727)
HIX0213727
HIT000065278
(
AF063602
)
(Tetratricopeptide repeat protein 4; TPR repeat protein 4;)
genome : 55,181,534 - 55,207,978 (26,445)
query : 2 - 2,005 (2,004/2,007)
10 exons
identity = 0.998
5'(1.000;0.992;0.994;0.987;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 0.999
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 16.8333, cyto_mito 14.1667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213727)
HIX0213727
HIT000425223
(
AK292426
)
(Tetratricopeptide repeat protein 4; TPR repeat protein 4;)
genome : 55,181,534 - 55,207,663 (26,130)
query : 1 - 1,689 (1,689/1,689)
10 exons
identity = 0.998
5'(1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 16.8333, cyto_mito 14.1667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213727)
HIX0213727
HIT000590366 (
ENST00000486621
)
(Tetratricopeptide repeat protein 4; TPR repeat protein 4;)
genome : 55,181,538 - 55,183,440 (1,903)
query : 1 - 549 (549/549)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 6, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213727)
HIX0213727
HIT000015831
(
AK090964
)
(Tetratricopeptide repeat protein 4; TPR repeat protein 4;)
genome : 55,181,541 - 55,207,980 (26,440)
query : 2 - 2,125 (2,124/2,125)
10 exons
identity = 1.000
5'(1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 12, extr 3, plas 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213727)
HIX0213727
HIT000352564 (
ENST00000371284
)
(Tetratricopeptide repeat protein 4; TPR repeat protein 4;)
genome : 55,181,541 - 55,207,980 (26,440)
query : 1 - 2,123 (2,123/2,123)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, mito_pero 13.5, cyto 3.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213727)
HIX0213727
HIT000330342
(
AK222562
)
Representative transcript
(Tetratricopeptide repeat protein 4; TPR repeat protein 4;)
genome : 55,181,542 - 55,207,981 (26,440)
query : 1 - 1,999 (1,999/2,023)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 16.8333, cyto_mito 13.1667,
nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213727)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK133931
Danio
sp. (Zebrafish) : BC049428
Rattus
sp. (Rat) : BC083794
Bos
sp. (Cow) : BC140528
Gallus
sp. (Chicken) : CR352818
Tetraodon
sp. (Tetraodon) : CR701725
Pongo
sp. (Orangutan) : CR926478
Oryzias
sp. (Medaka) : ENSORLT00000012424
Pan
sp. (Chimpanzee) : ENSPTRT00000001472
Takifugu
sp. (Fugu) : SINFRUT00000156225
Macaca
sp. (Macaque) : XM_001114145
Monodelphis
sp. (Opossum) : XM_001381478
Equus
sp. (Horse) : XM_001915662
Canis
sp. (Dog) : XM_848083
HIX0213727
HIT000065966
(
AF073887
)
(Tetratricopeptide repeat protein 4; TPR repeat protein 4;)
genome : 55,181,549 - 55,207,981 (26,433)
query : 1 - 1,988 (1,988/2,005)
10 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;0.992;1.000;1.000;
0.976;1.000;0.994)3'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 16.8333, cyto_mito 13.6667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213727)
HIX0213727
HIT000030282
(
BC001276
)
(Tetratricopeptide repeat protein 4; TPR repeat protein 4;)
genome : 55,181,556 - 55,207,981 (26,426)
query : 1 - 1,985 (1,985/2,006)
10 exons
identity = 0.999
5'(1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 16.8333, cyto_mito 14.1667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213727)
HIX0213727
HIT000099737
(
BT006817
)
(Tetratricopeptide repeat protein 4; TPR repeat protein 4;)
genome : 55,181,582 - 55,207,184 (25,603)
query : 1 - 1,162 (1,162/1,164)
10 exons
identity = 0.999
5'(1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 16.8333, cyto_mito 14.1667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213727)
HIX0213727
HIT000043797
(
AK123924
)
(Tetratricopeptide repeat protein 4; TPR repeat protein 4;)
genome : 55,202,362 - 55,207,980 (5,619)
query : 1 - 1,873 (1,873/1,873)
2 exons
identity = 0.999
5'(0.999;0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213727)
HIX0213727
HIT000589863 (
ENST00000486091
)
(Tetratricopeptide repeat protein 4; TPR repeat protein 4;)
genome : 55,202,362 - 55,207,980 (5,619)
query : 1 - 1,873 (1,873/1,873)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213727)
HIX0000622
HIT000008859
(
AK025585
)
(Probable proline--tRNA ligase, mitochondrial; EC=6.1.1.15; Prolyl-tRNA synthetase; ProRS; Precursor;)
genome : 55,222,572 - 55,224,638 (2,067)
query : 1 - 2,067 (2,067/2,089)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
EC number :
EC 6.1.1.15
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR002314 : Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
IPR002316 : Proline-tRNA ligase, class IIa
IPR004154 : Anticodon-binding
IPR004500 : Prolyl-tRNA synthetase, class IIa, bacterial-type
IPR006195 : Aminoacyl-tRNA synthetase, class II
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004827 : Molecular Function : proline-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006433 : Biological Process : prolyl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, nucl 2, cyto 2, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000622)
HIX0000622
HIT000033556
(
BC007956
)
(Probable proline--tRNA ligase, mitochondrial; EC=6.1.1.15; Prolyl-tRNA synthetase; ProRS; Precursor;)
genome : 55,222,572 - 55,224,861 (2,290)
query : 11 - 2,300 (2,290/2,321)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.996
EC number :
EC 6.1.1.15
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR002314 : Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
IPR002316 : Proline-tRNA ligase, class IIa
IPR004154 : Anticodon-binding
IPR004500 : Prolyl-tRNA synthetase, class IIa, bacterial-type
IPR006195 : Aminoacyl-tRNA synthetase, class II
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004827 : Molecular Function : proline-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006433 : Biological Process : prolyl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto_mito 15.3333, mito_pero 13.8333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000622)
HIX0000622
HIT000213545 (
NM_152268
)
(Probable proline--tRNA ligase, mitochondrial; EC=6.1.1.15; Prolyl-tRNA synthetase; ProRS; Precursor;)
genome : 55,222,572 - 55,230,226 (7,655)
query : 1 - 2,385 (2,385/2,403)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.15
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto_mito 15.3333, mito_pero 13.8333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000622)
HIX0000622
HIT000035430
(
BC011758
)
Representative transcript
(Probable proline--tRNA ligase, mitochondrial; EC=6.1.1.15; Prolyl-tRNA synthetase; ProRS; Precursor;)
genome : 55,222,572 - 55,230,187 (7,616)
query : 1 - 2,346 (2,346/2,364)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.15
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR002314 : Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
IPR002316 : Proline-tRNA ligase, class IIa
IPR004154 : Anticodon-binding
IPR004500 : Prolyl-tRNA synthetase, class IIa, bacterial-type
IPR006195 : Aminoacyl-tRNA synthetase, class II
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004827 : Molecular Function : proline-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006433 : Biological Process : prolyl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto_mito 15.3333, mito_pero 13.8333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000622)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK154150
Danio
sp. (Zebrafish) : BC065673
Rattus
sp. (Rat) : BC088403
Gallus
sp. (Chicken) : BX934962
Tetraodon
sp. (Tetraodon) : CR642122
Equus
sp. (Horse) : ENSECAT00000005229
Monodelphis
sp. (Opossum) : ENSMODT00000038598
Takifugu
sp. (Fugu) : SINFRUT00000156226
Macaca
sp. (Macaque) : XM_001114166
Pan
sp. (Chimpanzee) : XM_513427
Canis
sp. (Dog) : XM_546694
Bos
sp. (Cow) : XM_585755
HIX0000622
HIT000024635
(
AL117473
)
(Probable proline--tRNA ligase, mitochondrial; EC=6.1.1.15; Prolyl-tRNA synthetase; ProRS; Precursor;)
genome : 55,222,572 - 55,224,637 (2,066)
query : 1 - 2,066 (2,066/2,075)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.15
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR002314 : Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
IPR002316 : Proline-tRNA ligase, class IIa
IPR004154 : Anticodon-binding
IPR004500 : Prolyl-tRNA synthetase, class IIa, bacterial-type
IPR006195 : Aminoacyl-tRNA synthetase, class II
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004827 : Molecular Function : proline-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006433 : Biological Process : prolyl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, nucl 2, cyto 2, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000622)
HIX0000622
HIT000352559 (
ENST00000371279
)
(Probable proline--tRNA ligase, mitochondrial; EC=6.1.1.15; Prolyl-tRNA synthetase; ProRS; Precursor;)
genome : 55,222,571 - 55,230,187 (7,617)
query : 1 - 2,347 (2,347/2,347)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.15
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto_mito 15.3333, mito_pero 13.8333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000622)
HIX0000622
HIT000422476
(
AK289679
)
(Probable proline--tRNA ligase, mitochondrial; EC=6.1.1.15; Prolyl-tRNA synthetase; ProRS; Precursor;)
genome : 55,223,328 - 55,230,176 (6,849)
query : 3 - 1,581 (1,579/1,581)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.999
EC number :
EC 6.1.1.15
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR002314 : Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
IPR002316 : Proline-tRNA ligase, class IIa
IPR004154 : Anticodon-binding
IPR004500 : Prolyl-tRNA synthetase, class IIa, bacterial-type
IPR006195 : Aminoacyl-tRNA synthetase, class II
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004827 : Molecular Function : proline-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006433 : Biological Process : prolyl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto_mito 15.3333, mito_pero 13.8333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000622)
HIX0000623
HIT000352556 (
ENST00000371276
)
(Tetratricopeptide-like helical domain containing protein.)
genome : 55,245,385 - 55,266,940 (21,556)
query : 1 - 3,345 (3,345/3,345)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 17, nucl 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000623)
HIX0000623
HIT000485948 (
NM_001114108
)
(Tetratricopeptide-like helical domain containing protein.)
genome : 55,246,752 - 55,266,941 (20,190)
query : 1 - 1,979 (1,979/1,979)
7 exons
identity = 0.999
3'(1.000;1.000;0.994;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 17, nucl 13.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000623)
HIX0000623
eHIT000012275 ( ESTsASS_1_2281 )
(Non-protein coding transcript.)
genome : 55,247,269 - 55,266,659 (19,391)
query : 1 - 1,180 (1,180/1,180)
7 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000623)
ESTs used for assembly :
AA782829,AA771735,BF511635,H79241
BF511638,AI984641
HIX0000623
HIT000023804
(
AL049431
)
(Tetratricopeptide-like helical domain containing protein.)
genome : 55,247,269 - 55,253,668 (6,400)
query : 2 - 2,351 (2,350/2,351)
3 exons
identity = 0.999
3'(1.000;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 5.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000623)
HIX0000623
HIT000592401 (
ENST00000488771
)
(Tetratricopeptide-like helical domain containing protein.)
genome : 55,247,269 - 55,253,668 (6,400)
query : 1 - 2,350 (2,350/2,350)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 5.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000623)
HIX0000623
HIT000206762 (
NM_017904
)
(Tetratricopeptide-like helical domain containing protein.)
genome : 55,250,224 - 55,266,941 (16,718)
query : 1 - 2,219 (2,219/2,249)
6 exons
identity = 1.000
3'(1.000;0.994;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, extr 10, nucl 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000623)
HIX0000623
HIT000003101
(
AK000626
)
Representative transcript
(Conserved hypothetical protein.)
genome : 55,250,224 - 55,266,871 (16,648)
query : 1 - 2,149 (2,149/2,179)
6 exons
identity = 0.998
3'(0.998;0.988;1.000;0.991;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, extr 10, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000623)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK028895
Bos
sp. (Cow) : BC140508
Equus
sp. (Horse) : ENSECAT00000007167
Oryzias
sp. (Medaka) : ENSORLT00000012443
Pongo
sp. (Orangutan) : ENSPPYT00000001575
Tetraodon
sp. (Tetraodon) : GSTENT00033605001
Takifugu
sp. (Fugu) : SINFRUT00000160665
Rattus
sp. (Rat) : XM_001065383
Monodelphis
sp. (Opossum) : XM_001381459
Pan
sp. (Chimpanzee) : XM_513428
Danio
sp. (Zebrafish) : XM_690141
Macaca
sp. (Macaque) : XR_014240
HIX0000623
HIT000352554 (
ENST00000371274
)
(Tetratricopeptide-like helical domain containing protein.)
genome : 55,250,224 - 55,266,871 (16,648)
query : 1 - 2,149 (2,149/2,149)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, extr 10, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000623)
HIX0000623
HIT000546242 (
ENST00000448308
)
(Tetratricopeptide-like helical domain containing protein.)
genome : 55,250,227 - 55,253,465 (3,239)
query : 1 - 686 (686/686)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 8, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000623)
HIX0000623
HIT000578934 (
ENST00000474654
)
(Conserved hypothetical protein.)
genome : 55,252,316 - 55,253,578 (1,263)
query : 1 - 628 (628/628)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 4, nucl 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000623)
HIX0161342
HIT000548437 (
ENST00000450503
)
(Hypothetical short protein.)
genome : 55,258,558 - 55,260,578 (2,021)
query : 1 - 343 (343/343)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, extr 8, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161342)
HIX0017287
HIT000213870 (
NM_152607
)
(Uncharacterized protein C1orf177 homolog;)
genome : 55,271,736 - 55,307,937 (36,202)
query : 1 - 1,789 (1,789/1,806)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.1667, cyto 8.5,
cyto_golg 5.83333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017287)
HIX0017287
HIT000485821 (
NM_001110533
)
(Uncharacterized protein C1orf177 homolog;)
genome : 55,271,736 - 55,307,937 (36,202)
query : 1 - 1,702 (1,702/1,719)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15.1667, cyto 7.5,
cyto_golg 5.33333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017287)
HIX0017287
HIT000022374
(
AK097520
)
Representative transcript
(Uncharacterized protein C1orf177 homolog;)
genome : 55,271,736 - 55,307,923 (36,188)
query : 1 - 1,775 (1,775/1,777)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;0.998)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.6667, cyto 9.5,
cyto_golg 6.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017287)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC055111
Bos
sp. (Cow) : ENSBTAT00000022787
Canis
sp. (Dog) : ENSCAFT00000030167
Equus
sp. (Horse) : ENSECAT00000005474
Gallus
sp. (Chicken) : ENSGALT00000017549
Pongo
sp. (Orangutan) : ENSPPYT00000001574
Pan
sp. (Chimpanzee) : ENSPTRT00000001480
Rattus
sp. (Rat) : ENSRNOT00000052130
Monodelphis
sp. (Opossum) : XM_001381455
Macaca
sp. (Macaque) : XR_014243
HIX0017287
HIT000311934 (
ENST00000358193
)
(Uncharacterized protein C1orf177 homolog;)
genome : 55,271,736 - 55,307,925 (36,190)
query : 1 - 1,777 (1,777/1,777)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.1667, cyto 8.5,
cyto_golg 5.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017287)
HIX0017287
HIT000261284
(
BC064142
)
(Uncharacterized protein C1orf177 homolog;)
genome : 55,271,774 - 55,307,930 (36,157)
query : 1 - 1,744 (1,744/1,760)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.6667, cyto 9.5,
cyto_golg 6.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017287)
HIX0017287
HIT000095518
(
BC039109
)
(Uncharacterized protein C1orf177 homolog;)
genome : 55,271,775 - 55,307,925 (36,151)
query : 1 - 1,651 (1,651/1,673)
10 exons
identity = 0.996
5'(0.992;1.000;1.000;0.992;0.993;1.000;1.000;
1.000;1.000;0.993)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15.1667, cyto 7.5,
cyto_golg 5.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017287)
HIX0017287
HIT000352553 (
ENST00000371273
)
(Uncharacterized protein C1orf177 homolog;)
genome : 55,271,775 - 55,307,925 (36,151)
query : 1 - 1,651 (1,651/1,651)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15.1667, cyto 7.5,
cyto_golg 5.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017287)
HIX0000624
HIT000556323 (
ENST00000458389
)
(Hypothetical short protein.)
genome : 55,314,138 - 55,316,072 (1,935)
query : 1 - 503 (503/503)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000624)
HIX0000624
HIT000035358
(
BC011669
)
(Delta(24)-sterol reductase; EC=1.3.1.72; 24-dehydrocholesterol reductase; 3-beta-hydroxysterol delta-24-reductase; Diminuto/dwarf1 homolog; Seladin-1; Precursor;)
genome : 55,315,307 - 55,352,854 (37,548)
query : 1 - 4,212 (4,212/4,254)
9 exons
identity = 0.999
3'(0.999;1.000;0.995;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.1.72
KEGG pathway :
00100 : Steroid biosynthesis (20)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR006094 : FAD linked oxidase, N-terminal
IPR016166 : FAD-binding, type 2
IPR016169 : CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
GO :
0003824 : Molecular Function : catalytic activity
0008762 : Molecular Function : UDP-N-acetylmuramate dehydrogenase activity
0016491 : Molecular Function : oxidoreductase activity
0016614 : Molecular Function : oxidoreductase activity, acting on CH-OH group of donors
0050660 : Molecular Function : flavin adenine dinucleotide binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 26, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000624)
HIX0000624
HIT000031900
(
BC004375
)
(Delta(24)-sterol reductase; EC=1.3.1.72; 24-dehydrocholesterol reductase; 3-beta-hydroxysterol delta-24-reductase; Diminuto/dwarf1 homolog; Seladin-1; Precursor;)
genome : 55,315,307 - 55,352,827 (37,521)
query : 1 - 4,185 (4,185/4,202)
9 exons
identity = 0.999
3'(0.999;1.000;0.995;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.1.72
KEGG pathway :
00100 : Steroid biosynthesis (20)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR006094 : FAD linked oxidase, N-terminal
IPR016166 : FAD-binding, type 2
IPR016169 : CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
GO :
0003824 : Molecular Function : catalytic activity
0008762 : Molecular Function : UDP-N-acetylmuramate dehydrogenase activity
0016491 : Molecular Function : oxidoreductase activity
0016614 : Molecular Function : oxidoreductase activity, acting on CH-OH group of donors
0050660 : Molecular Function : flavin adenine dinucleotide binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 26, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000624)
HIX0000624
HIT000205065 (
NM_014762
)
(Delta(24)-sterol reductase; EC=1.3.1.72; 24-dehydrocholesterol reductase; 3-beta-hydroxysterol delta-24-reductase; Diminuto/dwarf1 homolog; Seladin-1; Precursor;)
genome : 55,315,300 - 55,352,921 (37,622)
query : 1 - 4,286 (4,286/4,286)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.1.72
KEGG pathway :
00100 : Steroid biosynthesis (20)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 26, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000624)
HIX0000624
HIT000042151
(
D13643
)
Representative transcript
(Delta(24)-sterol reductase; EC=1.3.1.72; 24-dehydrocholesterol reductase; 3-beta-hydroxysterol delta-24-reductase; Diminuto/dwarf1 homolog; Seladin-1; Precursor;)
genome : 55,315,301 - 55,352,903 (37,603)
query : 2 - 4,268 (4,267/4,268)
9 exons
identity = 0.999
3'(0.999;1.000;0.995;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.1.72
KEGG pathway :
00100 : Steroid biosynthesis (20)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR006094 : FAD linked oxidase, N-terminal
IPR016166 : FAD-binding, type 2
IPR016169 : CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
GO :
0003824 : Molecular Function : catalytic activity
0008762 : Molecular Function : UDP-N-acetylmuramate dehydrogenase activity
0016491 : Molecular Function : oxidoreductase activity
0016614 : Molecular Function : oxidoreductase activity, acting on CH-OH group of donors
0050660 : Molecular Function : flavin adenine dinucleotide binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 26, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000624)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB125202
Gallus
sp. (Chicken) : AJ720832
Mus
sp. (Mouse) : AK129036
Pan
sp. (Chimpanzee) : AY369804
Rattus
sp. (Rat) : AY921220
Danio
sp. (Zebrafish) : BC086711
Bos
sp. (Cow) : BC150073
Monodelphis
sp. (Opossum) : ENSMODT00000004815
Oryzias
sp. (Medaka) : ENSORLT00000001990
Pongo
sp. (Orangutan) : ENSPPYT00000001573
Tetraodon
sp. (Tetraodon) : GSTENT00032709001
Takifugu
sp. (Fugu) : SINFRUT00000161688
Canis
sp. (Dog) : XM_860753
HIX0000624
HIT000328435
(
AB073391
)
(Delta(24)-sterol reductase; EC=1.3.1.72; 24-dehydrocholesterol reductase; 3-beta-hydroxysterol delta-24-reductase; Diminuto/dwarf1 homolog; Seladin-1; Precursor;)
genome : 55,315,306 - 55,352,849 (37,544)
query : 1 - 4,155 (4,155/4,158)
10 exons
identity = 0.999
3'(0.999;1.000;0.995;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 1.3.1.72
KEGG pathway :
00100 : Steroid biosynthesis (20)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR006094 : FAD linked oxidase, N-terminal
IPR016166 : FAD-binding, type 2
IPR016169 : CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
GO :
0003824 : Molecular Function : catalytic activity
0008762 : Molecular Function : UDP-N-acetylmuramate dehydrogenase activity
0016491 : Molecular Function : oxidoreductase activity
0016614 : Molecular Function : oxidoreductase activity, acting on CH-OH group of donors
0050660 : Molecular Function : flavin adenine dinucleotide binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 5.5, cyto_nucl 4, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000624)
HIX0000624
HIT000352549 (
ENST00000371269
)
(Delta(24)-sterol reductase; EC=1.3.1.72; 24-dehydrocholesterol reductase; 3-beta-hydroxysterol delta-24-reductase; Diminuto/dwarf1 homolog; Seladin-1; Precursor;)
genome : 55,315,306 - 55,352,891 (37,586)
query : 1 - 4,250 (4,250/4,250)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.1.72
KEGG pathway :
00100 : Steroid biosynthesis (20)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 26, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000624)
HIX0000624
HIT000075303
(
AF261758
)
(Delta(24)-sterol reductase; EC=1.3.1.72; 24-dehydrocholesterol reductase; 3-beta-hydroxysterol delta-24-reductase; Diminuto/dwarf1 homolog; Seladin-1; Precursor;)
genome : 55,315,308 - 55,352,891 (37,584)
query : 1 - 4,248 (4,248/4,248)
9 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.997)5'
coverage = 1.000
EC number :
EC 1.3.1.72
KEGG pathway :
00100 : Steroid biosynthesis (20)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR006094 : FAD linked oxidase, N-terminal
IPR016166 : FAD-binding, type 2
IPR016169 : CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
GO :
0003824 : Molecular Function : catalytic activity
0008762 : Molecular Function : UDP-N-acetylmuramate dehydrogenase activity
0016491 : Molecular Function : oxidoreductase activity
0016614 : Molecular Function : oxidoreductase activity, acting on CH-OH group of donors
0050660 : Molecular Function : flavin adenine dinucleotide binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 26, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000624)
HIX0000624
HIT000534538 (
ENST00000436604
)
(Delta(24)-sterol reductase; EC=1.3.1.72; 24-dehydrocholesterol reductase; 3-beta-hydroxysterol delta-24-reductase; Diminuto/dwarf1 homolog; Seladin-1; Precursor;)
genome : 55,316,549 - 55,319,839 (3,291)
query : 1 - 863 (863/863)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.1.72
KEGG pathway :
00100 : Steroid biosynthesis (20)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 9.5, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000624)
HIX0000624
HIT000499045
(
AK304421
)
(Delta(24)-sterol reductase; EC=1.3.1.72; 24-dehydrocholesterol reductase; 3-beta-hydroxysterol delta-24-reductase; Diminuto/dwarf1 homolog; Seladin-1; Precursor;)
genome : 55,317,324 - 55,352,870 (35,547)
query : 1 - 1,389 (1,389/1,389)
4 exons
identity = 0.991
3'(1.000;1.000;0.927;1.000)5'
coverage = 1.000
EC number :
EC 1.3.1.72
KEGG pathway :
00100 : Steroid biosynthesis (20)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 13, extr 12, plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000624)
HIX0000624
HIT000500040
(
AK316427
)
(Delta(24)-sterol reductase; EC=1.3.1.72; 24-dehydrocholesterol reductase; 3-beta-hydroxysterol delta-24-reductase; Diminuto/dwarf1 homolog; Seladin-1; Precursor;)
genome : 55,317,351 - 55,352,622 (35,272)
query : 1 - 1,936 (1,936/1,936)
9 exons
identity = 0.999
3'(1.000;1.000;0.995;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.1.72
KEGG pathway :
00100 : Steroid biosynthesis (20)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR006094 : FAD linked oxidase, N-terminal
IPR016166 : FAD-binding, type 2
IPR016169 : CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
GO :
0003824 : Molecular Function : catalytic activity
0008762 : Molecular Function : UDP-N-acetylmuramate dehydrogenase activity
0016491 : Molecular Function : oxidoreductase activity
0016614 : Molecular Function : oxidoreductase activity, acting on CH-OH group of donors
0050660 : Molecular Function : flavin adenine dinucleotide binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 5.5, cyto_nucl 4, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000624)
HIX0000624
HIT000498926
(
AK304302
)
(Delta(24)-sterol reductase; EC=1.3.1.72; 24-dehydrocholesterol reductase; 3-beta-hydroxysterol delta-24-reductase; Diminuto/dwarf1 homolog; Seladin-1; Precursor;)
genome : 55,317,396 - 55,341,668 (24,273)
query : 1 - 1,478 (1,478/1,478)
6 exons
identity = 0.999
3'(1.000;0.994;0.995;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.1.72
KEGG pathway :
00100 : Steroid biosynthesis (20)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR016166 : FAD-binding, type 2
IPR016169 : CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
GO :
0003824 : Molecular Function : catalytic activity
0016614 : Molecular Function : oxidoreductase activity, acting on CH-OH group of donors
0050660 : Molecular Function : flavin adenine dinucleotide binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000624)
HIX0000624
HIT000636488 (
ENST00000537443
)
(Delta(24)-sterol reductase; EC=1.3.1.72; 24-dehydrocholesterol reductase; 3-beta-hydroxysterol delta-24-reductase; Diminuto/dwarf1 homolog; Seladin-1; Precursor;)
genome : 55,317,396 - 55,341,668 (24,273)
query : 1 - 1,478 (1,478/1,478)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.1.72
KEGG pathway :
00100 : Steroid biosynthesis (20)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000624)
HIX0000624
HIT000497398
(
AK302774
)
(Delta(24)-sterol reductase; EC=1.3.1.72; 24-dehydrocholesterol reductase; 3-beta-hydroxysterol delta-24-reductase; Diminuto/dwarf1 homolog; Seladin-1; Precursor;)
genome : 55,317,583 - 55,352,481 (34,899)
query : 1 - 1,834 (1,834/1,834)
9 exons
identity = 0.999
3'(0.998;1.000;0.995;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.1.72
KEGG pathway :
00100 : Steroid biosynthesis (20)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR006094 : FAD linked oxidase, N-terminal
IPR016166 : FAD-binding, type 2
IPR016169 : CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
GO :
0003824 : Molecular Function : catalytic activity
0008762 : Molecular Function : UDP-N-acetylmuramate dehydrogenase activity
0016491 : Molecular Function : oxidoreductase activity
0016614 : Molecular Function : oxidoreductase activity, acting on CH-OH group of donors
0050660 : Molecular Function : flavin adenine dinucleotide binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 14.5, nucl 4, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000624)
HIX0000624
HIT000634080 (
ENST00000535035
)
(Delta(24)-sterol reductase; EC=1.3.1.72; 24-dehydrocholesterol reductase; 3-beta-hydroxysterol delta-24-reductase; Diminuto/dwarf1 homolog; Seladin-1; Precursor;)
genome : 55,317,583 - 55,352,481 (34,899)
query : 1 - 1,834 (1,834/1,834)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.1.72
KEGG pathway :
00100 : Steroid biosynthesis (20)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 14.5, nucl 4, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000624)
HIX0000624
HIT000500032
(
AK316419
)
(Delta(24)-sterol reductase; EC=1.3.1.72; 24-dehydrocholesterol reductase; 3-beta-hydroxysterol delta-24-reductase; Diminuto/dwarf1 homolog; Seladin-1; Precursor;)
genome : 55,317,723 - 55,352,412 (34,690)
query : 1 - 1,625 (1,625/1,625)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.1.72
KEGG pathway :
00100 : Steroid biosynthesis (20)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR006094 : FAD linked oxidase, N-terminal
IPR016166 : FAD-binding, type 2
IPR016169 : CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
GO :
0003824 : Molecular Function : catalytic activity
0008762 : Molecular Function : UDP-N-acetylmuramate dehydrogenase activity
0016491 : Molecular Function : oxidoreductase activity
0016614 : Molecular Function : oxidoreductase activity, acting on CH-OH group of donors
0050660 : Molecular Function : flavin adenine dinucleotide binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 14, cysk 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000624)
HIX0000624
HIT000499061
(
AK304437
)
(Delta(24)-sterol reductase; EC=1.3.1.72; 24-dehydrocholesterol reductase; 3-beta-hydroxysterol delta-24-reductase; Diminuto/dwarf1 homolog; Seladin-1; Precursor;)
genome : 55,317,796 - 55,352,569 (34,774)
query : 1 - 1,507 (1,507/1,507)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.1.72
KEGG pathway :
00100 : Steroid biosynthesis (20)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR006094 : FAD linked oxidase, N-terminal
IPR016166 : FAD-binding, type 2
IPR016169 : CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
GO :
0003824 : Molecular Function : catalytic activity
0008762 : Molecular Function : UDP-N-acetylmuramate dehydrogenase activity
0016491 : Molecular Function : oxidoreductase activity
0016614 : Molecular Function : oxidoreductase activity, acting on CH-OH group of donors
0050660 : Molecular Function : flavin adenine dinucleotide binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 5.5, cyto_nucl 4, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000624)
HIX0000624
HIT000493038
(
AK298414
)
(Delta(24)-sterol reductase; EC=1.3.1.72; 24-dehydrocholesterol reductase; 3-beta-hydroxysterol delta-24-reductase; Diminuto/dwarf1 homolog; Seladin-1; Precursor;)
genome : 55,317,813 - 55,331,353 (13,541)
query : 1 - 1,002 (1,002/1,002)
4 exons
identity = 0.999
3'(1.000;1.000;1.000;0.997)5'
coverage = 1.000
EC number :
EC 1.3.1.72
KEGG pathway :
00100 : Steroid biosynthesis (20)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 12.5, cyto_nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000624)
HIX0159892
HIT000513270 (
ENST00000415336
)
(Conserved hypothetical protein.)
genome : 55,352,548 - 55,353,674 (1,127)
query : 1 - 575 (575/575)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, mito 6, cyto 3, E.R._mito 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159892)
HIX0159892
HIT000563976
(
AB593175
)
Representative transcript
(Conserved hypothetical protein.)
genome : 55,352,655 - 55,353,883 (1,229)
query : 1 - 677 (677/677)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, mito 6, cyto 3, E.R._mito 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159892)
Ortholog candidate ( ->
Evola
)
Tetraodon
sp. (Tetraodon) : CR717699
HIX0159892
HIT000541218 (
ENST00000443284
)
(Hypothetical short protein.)
genome : 55,353,236 - 55,354,391 (1,156)
query : 1 - 440 (440/440)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8, mito 4, cyto_nucl 4, cyto_pero 4,
cyto_plas 4, cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159892)
HIX0159892
HIT000533967 (
ENST00000436033
)
(Hypothetical short protein.)
genome : 55,353,400 - 55,354,336 (937)
query : 1 - 414 (414/414)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159892)
HIX0159892
HIT000553314 (
ENST00000455380
)
(Hypothetical short protein.)
genome : 55,353,401 - 55,354,523 (1,123)
query : 1 - 515 (515/515)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159892)
HIX0159892
HIT000531624 (
ENST00000433690
)
(Hypothetical short protein.)
genome : 55,353,405 - 55,354,523 (1,119)
query : 1 - 403 (403/403)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8, mito 4, cyto_nucl 4, cyto_pero 4,
cyto_plas 4, cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159892)
HIX0203494
HIT000439425_03
(
DQ572894
)
Representative transcript
(Non-protein coding transcript.)
genome : 55,363,593 - 55,363,621 (29)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203494)
HIX0000625
HIT000040868
(
BC029775
)
Representative transcript
(Transmembrane protein 61.)
genome : 55,446,465 - 55,457,966 (11,502)
query : 1 - 1,097 (1,097/1,122)
3 exons
identity = 0.999
5'(1.000;0.997;1.000)3'
coverage = 1.000
InterPro :
IPR028164 : TMEM61 protein family
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, plas 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000625)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK028711
Canis
sp. (Dog) : ENSCAFT00000030158
Gallus
sp. (Chicken) : ENSGALT00000017563
Pongo
sp. (Orangutan) : ENSPPYT00000001572
Rattus
sp. (Rat) : ENSRNOT00000036793
Macaca
sp. (Macaque) : XM_001108284
Equus
sp. (Horse) : XM_001492579
Bos
sp. (Cow) : XM_867550
Pan
sp. (Chimpanzee) : XR_021382
HIX0000625
HIT000318624 (
NM_182532
)
(Transmembrane protein 61.)
genome : 55,446,465 - 55,457,966 (11,502)
query : 1 - 1,097 (1,097/1,122)
3 exons
identity = 0.999
5'(1.000;0.997;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, plas 12
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000625)
HIX0000625
HIT000352548 (
ENST00000371268
)
(Transmembrane protein 61.)
genome : 55,446,465 - 55,457,966 (11,502)
query : 1 - 1,097 (1,097/1,097)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, plas 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000625)
HIX0160944
HIT000534894 (
ENST00000436960
)
(Non-protein coding transcript.)
genome : 55,446,623 - 55,457,947 (11,325)
query : 1 - 428 (428/428)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160944)
HIX0028661
HIT000352545 (
ENST00000371265
)
(Barttin;)
genome : 55,464,606 - 55,476,556 (11,951)
query : 1 - 3,472 (3,472/3,472)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, E.R. 5, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028661)
HIX0028661
HIT000083496
(
AY034632
)
Representative transcript
(Barttin;)
genome : 55,464,617 - 55,474,465 (9,849)
query : 1 - 1,370 (1,370/1,396)
4 exons
identity = 0.996
5'(0.995;1.000;1.000;0.993)3'
coverage = 1.000
InterPro :
IPR029181 : Barttin domain
GO :
0006821 : Biological Process : chloride transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, E.R. 5, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028661)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF391088
Rattus
sp. (Rat) : BC081725
Pongo
sp. (Orangutan) : CR860859
Bos
sp. (Cow) : ENSBTAT00000017615
Canis
sp. (Dog) : ENSCAFT00000030156
Equus
sp. (Horse) : ENSECAT00000017969
Macaca
sp. (Macaque) : XM_001114228
Monodelphis
sp. (Opossum) : XM_001381419
HIX0028661
HIT000211680 (
NM_057176
)
(Barttin;)
genome : 55,464,617 - 55,474,465 (9,849)
query : 1 - 1,370 (1,370/1,396)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, E.R. 5, lyso 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028661)
HIX0028661
HIT000337450
(
BC103898
)
(Barttin;)
genome : 55,464,638 - 55,474,454 (9,817)
query : 1 - 1,338 (1,338/1,338)
4 exons
identity = 0.999
5'(0.995;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029181 : Barttin domain
GO :
0006821 : Biological Process : chloride transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, E.R. 5, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028661)
HIX0028661
HIT000337451
(
BC103899
)
(Barttin;)
genome : 55,464,638 - 55,474,454 (9,817)
query : 1 - 1,338 (1,338/1,338)
4 exons
identity = 0.999
5'(0.995;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029181 : Barttin domain
GO :
0006821 : Biological Process : chloride transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, E.R. 5, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028661)
HIX0028661
HIT000337452
(
BC103900
)
(Barttin;)
genome : 55,464,638 - 55,474,454 (9,817)
query : 1 - 1,338 (1,338/1,338)
4 exons
identity = 0.999
5'(0.995;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029181 : Barttin domain
GO :
0006821 : Biological Process : chloride transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, E.R. 5, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028661)
HIX0028661
HIT000263661
(
BC069510
)
(Barttin;)
genome : 55,464,790 - 55,474,370 (9,581)
query : 1 - 1,099 (1,099/1,099)
4 exons
identity = 0.997
5'(1.000;1.000;0.993;0.998)3'
coverage = 1.000
InterPro :
IPR029181 : Barttin domain
GO :
0006821 : Biological Process : chloride transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, E.R. 5, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028661)
HIX0023558
HIT000215187 (
NM_174936
)
(Proprotein convertase subtilisin/kexin type 9; EC=3.4.21.-; Neural apoptosis-regulated convertase 1; NARC-1; Proprotein convertase 9; PC9; Subtilisin/kexin-like protease PC9; Precursor;)
genome : 55,505,149 - 55,530,526 (25,378)
query : 1 - 3,710 (3,710/3,731)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 12, plas 6, mito 5, cyto_plas 5, cyto 4,
E.R._mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023558)
HIX0023558
HIT000082400
(
AK075365
)
(Proprotein convertase subtilisin/kexin type 9; EC=3.4.21.-; Neural apoptosis-regulated convertase 1; NARC-1; Proprotein convertase 9; PC9; Subtilisin/kexin-like protease PC9; Precursor;)
genome : 55,505,222 - 55,530,523 (25,302)
query : 3 - 3,635 (3,633/3,635)
12 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.995;
0.994;0.980;1.000;1.000;0.997)3'
coverage = 0.999
EC number :
EC 3.4.21.-
InterPro :
IPR000209 : Peptidase S8/S53 domain
IPR009020 : Proteinase inhibitor, propeptide
IPR010259 : Peptidase S8 propeptide/proteinase inhibitor I9
IPR015500 : Peptidase S8, subtilisin-related
GO :
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, lyso 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023558)
HIX0023558
HIT000116057 (
ENST00000302118
)
(Proprotein convertase subtilisin/kexin type 9; EC=3.4.21.-; Neural apoptosis-regulated convertase 1; NARC-1; Proprotein convertase 9; PC9; Subtilisin/kexin-like protease PC9; Precursor;)
genome : 55,505,221 - 55,530,525 (25,305)
query : 1 - 3,637 (3,637/3,637)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, lyso 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023558)
HIX0023558
HIT000042590
(
AK122717
)
Representative transcript
(Proprotein convertase subtilisin/kexin type 9; EC=3.4.21.-; Neural apoptosis-regulated convertase 1; NARC-1; Proprotein convertase 9; PC9; Subtilisin/kexin-like protease PC9; Precursor;)
genome : 55,505,426 - 55,530,523 (25,098)
query : 5 - 3,392 (3,388/3,392)
13 exons
identity = 0.994
5'(0.977;0.844;1.000;1.000;1.000;1.000;0.995;
0.995;1.000;0.987;1.000;1.000;0.999)3'
coverage = 0.999
EC number :
EC 3.4.21.-
InterPro :
IPR000209 : Peptidase S8/S53 domain
IPR009020 : Proteinase inhibitor, propeptide
IPR010259 : Peptidase S8 propeptide/proteinase inhibitor I9
IPR015500 : Peptidase S8, subtilisin-related
GO :
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, lyso 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023558)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AY847775
Mus
sp. (Mouse) : BC038085
Pongo
sp. (Orangutan) : EF692500
Equus
sp. (Horse) : ENSECAT00000011397
Gallus
sp. (Chicken) : ENSGALT00000028066
Oryzias
sp. (Medaka) : ENSORLT00000002021
Tetraodon
sp. (Tetraodon) : GSTENT00032705001
Pan
sp. (Chimpanzee) : XM_001154126
Monodelphis
sp. (Opossum) : XM_001381413
Danio
sp. (Zebrafish) : XM_001922905
Macaca
sp. (Macaque) : XR_013551
HIX0023558
HIT000488494
(
AK293870
)
(Proprotein convertase subtilisin/kexin type 9; EC=3.4.21.-; Proprotein convertase 9; PC9; Subtilisin/kexin-like protease PC9; Precursor;)
genome : 55,505,431 - 55,518,424 (12,994)
query : 1 - 1,101 (1,101/1,101)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.-
InterPro :
IPR000209 : Peptidase S8/S53 domain
IPR015500 : Peptidase S8, subtilisin-related
GO :
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 12.5, cyto 11.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023558)
HIX0023558
HIT000550052 (
ENST00000452118
)
(Proprotein convertase subtilisin/kexin type 9; EC=3.4.21.-; Proprotein convertase 9; PC9; Subtilisin/kexin-like protease PC9; Precursor;)
genome : 55,505,431 - 55,518,424 (12,994)
query : 1 - 1,101 (1,101/1,101)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 12.5, cyto 11.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023558)
HIX0023558
HIT000469861
(
EF692496
)
(Proprotein convertase subtilisin/kexin type 9; EC=3.4.21.-; Neural apoptosis-regulated convertase 1; NARC-1; Proprotein convertase 9; PC9; Subtilisin/kexin-like protease PC9; Precursor;)
genome : 55,505,511 - 55,529,257 (23,747)
query : 1 - 2,079 (2,079/2,079)
12 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.995;
1.000;0.987;1.000;1.000;0.995)3'
coverage = 1.000
EC number :
EC 3.4.21.-
InterPro :
IPR000209 : Peptidase S8/S53 domain
IPR009020 : Proteinase inhibitor, propeptide
IPR010259 : Peptidase S8 propeptide/proteinase inhibitor I9
IPR015500 : Peptidase S8, subtilisin-related
GO :
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, lyso 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023558)
HIX0023558
HIT000492097
(
AK297473
)
(Proprotein convertase subtilisin/kexin type 9; EC=3.4.21.-; Proprotein convertase 9; PC9; Subtilisin/kexin-like protease PC9; Precursor;)
genome : 55,505,895 - 55,529,112 (23,218)
query : 1 - 1,541 (1,541/1,541)
10 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;0.995;0.992;0.987;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.-
InterPro :
IPR000209 : Peptidase S8/S53 domain
IPR015500 : Peptidase S8, subtilisin-related
GO :
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 13.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023558)
HIX0023558
HIT000642429 (
ENST00000543384
)
(Proprotein convertase subtilisin/kexin type 9; EC=3.4.21.-; Proprotein convertase 9; PC9; Subtilisin/kexin-like protease PC9; Precursor;)
genome : 55,505,895 - 55,529,112 (23,218)
query : 1 - 1,541 (1,541/1,541)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 14.5, extr 6, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023558)
HIX0023558
HIT000044508
(
AK124635
)
(Proprotein convertase subtilisin/kexin type 9; EC=3.4.21.-; Neural apoptosis-regulated convertase 1; NARC-1; Proprotein convertase 9; PC9; Subtilisin/kexin-like protease PC9; Precursor;)
genome : 55,516,607 - 55,530,523 (13,917)
query : 1 - 3,891 (3,891/3,891)
8 exons
identity = 0.998
5'(0.997;1.000;1.000;1.000;1.000;0.987;1.000;
0.999)3'
coverage = 1.000
EC number :
EC 3.4.21.-
InterPro :
IPR000209 : Peptidase S8/S53 domain
IPR015500 : Peptidase S8, subtilisin-related
GO :
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 9, nucl 8.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023558)
HIX0023558
HIT000594239 (
ENST00000490692
)
(Proprotein convertase subtilisin/kexin type 9; EC=3.4.21.-; Neural apoptosis-regulated convertase 1; NARC-1; Proprotein convertase 9; PC9; Subtilisin/kexin-like protease PC9; Precursor;)
genome : 55,516,607 - 55,530,523 (13,917)
query : 1 - 3,891 (3,891/3,891)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 9, nucl 8.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023558)
HIX0023558
HIT000097122
(
BC042095
)
(Proprotein convertase subtilisin/kexin type 9; EC=3.4.21.-; Neural apoptosis-regulated convertase 1; NARC-1; Proprotein convertase 9; PC9; Subtilisin/kexin-like protease PC9; Precursor;)
genome : 55,523,108 - 55,530,526 (7,419)
query : 1 - 2,248 (2,248/2,303)
6 exons
identity = 0.998
5'(1.000;1.000;0.987;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.4.21.-
InterPro :
IPR000209 : Peptidase S8/S53 domain
IPR015500 : Peptidase S8, subtilisin-related
GO :
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14.5, cyto 10, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023558)
HIX0200122
HIT000055324
(
BX640776
)
Representative transcript
(Hypothetical short protein.)
genome : 55,531,371 - 55,534,930 (3,560)
query : 2 - 3,561 (3,560/3,575)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 9.5, cyto_nucl 7.5, cyto 4.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200122)
HIX0000626
HIT000027282
(
AL832370
)
(Ubiquitin carboxyl-terminal hydrolase 24.)
genome : 55,532,032 - 55,575,906 (43,875)
query : 1 - 6,028 (6,028/6,046)
30 exons
identity = 0.998
3'(0.998;1.000;0.989;1.000;1.000;0.930;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
InterPro :
IPR001394 : Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR018200 : Ubiquitin specific protease, conserved site
IPR028889 : Ubiquitin specific protease domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0036459 : Molecular Function : ubiquitinyl hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 9, nucl 6.5, pero 5, mito_pero 5,
plas 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000626)
HIX0000626
HIT000040857
(
BC029660
)
(Ubiquitin carboxyl-terminal hydrolase 24.)
genome : 55,532,034 - 55,551,685 (19,652)
query : 1 - 3,851 (3,851/3,865)
13 exons
identity = 0.998
3'(0.999;1.000;1.000;0.987;1.000;0.944;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 7, E.R._mito 5.33333, mito_pero 5.16667, extr 5,
nucl 5, mito 4.5, pero 4.5, cyto_plas 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000626)
HIX0000626
HIT000113841 (
ENST00000294383
)
(Ubiquitin carboxyl-terminal hydrolase 24; EC=3.4.19.12; Deubiquitinating enzyme 24; Ubiquitin thioesterase 24; Ubiquitin-specific-processing protease 24;)
genome : 55,532,032 - 55,681,039 (149,008)
query : 1 - 10,802 (10,802/10,802)
68 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.944;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, E.R. 8, nucl 5, cyto_plas 5, mito 4.5,
mito_pero 4.5, E.R._golg 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000626)
HIX0000626
HIT000486198 (
NM_015306
)
(Ubiquitin carboxyl-terminal hydrolase 24; EC=3.4.19.12; Deubiquitinating enzyme 24; Ubiquitin thioesterase 24; Ubiquitin-specific-processing protease 24;)
genome : 55,532,032 - 55,681,039 (149,008)
query : 1 - 10,802 (10,802/10,802)
68 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.944;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, E.R. 8, nucl 5, cyto_plas 5, mito 4.5,
mito_pero 4.5, E.R._golg 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000626)
HIX0000626
HIT000000774
(
AB028980
)
(Ubiquitin carboxyl-terminal hydrolase 24.)
genome : 55,532,035 - 55,569,645 (37,611)
query : 1 - 5,618 (5,618/5,618)
27 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.915;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 9.5, nucl 6.5, E.R. 4, pero 4,
plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000626)
HIX0000626
HIT000506084 (
ENST00000407756
)
(Ubiquitin carboxyl-terminal hydrolase 24.)
genome : 55,532,041 - 55,680,762 (148,722)
query : 1 - 10,060 (10,060/10,060)
65 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.944;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 7.5, pero 7.5, cyto_nucl 7, plas 6.5,
mito_pero 5.66667, cyto 5.5, extr_plas 4, E.R._mito 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000626)
HIX0000626
HIT000002796
(
AK000321
)
(Ubiquitin carboxyl-terminal hydrolase 24.)
genome : 55,533,816 - 55,549,563 (15,748)
query : 1 - 2,002 (2,002/2,018)
12 exons
identity = 0.997
3'(0.999;0.991;1.000;1.000;1.000;0.930;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 8.5, extr_plas 8, plas 6.5, pero 6.5, cyto 5,
mito_pero 4.5, nucl 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000626)
HIX0000626
HIT000588298 (
ENST00000484447
)
(Ubiquitin carboxyl-terminal hydrolase 24.)
genome : 55,536,946 - 55,541,172 (4,227)
query : 1 - 614 (614/614)
6 exons
identity = 0.994
3'(1.000;1.000;1.000;1.000;1.000;0.915)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 12, extr 6, cyto_mito 6, cyto_pero 6,
cyto_plas 6, cyto_golg 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000626)
HIX0000626
HIT000584950 (
ENST00000480962
)
(Ubiquitin carboxyl-terminal hydrolase 24.)
genome : 55,537,486 - 55,538,665 (1,180)
query : 1 - 406 (406/406)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 8, cyto_mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000626)
HIX0000626
HIT000576935 (
ENST00000472566
)
(Ubiquitin carboxyl-terminal hydrolase 24.)
genome : 55,547,060 - 55,552,097 (5,038)
query : 1 - 731 (731/731)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 8.5, cyto_nucl 7.5, mito 6, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000626)
HIX0000626
HIT000612152 (
ENST00000512504
)
(Ubiquitin carboxyl-terminal hydrolase 24.)
genome : 55,549,516 - 55,552,107 (2,592)
query : 1 - 568 (568/568)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 8, cyto 6, mito 6, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000626)
HIX0000626
HIT000586144 (
ENST00000482197
)
(Ubiquitin carboxyl-terminal hydrolase 24.)
genome : 55,559,226 - 55,560,992 (1,767)
query : 1 - 600 (600/600)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 8, plas 1, cyto 1, E.R. 1, pero 1,
cyto_pero 1, cyto_plas 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000626)
HIX0000626
HIT000046948
(
AK127075
)
Representative transcript
(Ubiquitin carboxyl-terminal hydrolase 24.)
genome : 55,559,717 - 55,613,437 (53,721)
query : 1 - 4,245 (4,245/4,245)
35 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000;1.000;1.000;0.990;1.000;1.000;
1.000;1.000;0.993;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
InterPro :
IPR001394 : Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR018200 : Ubiquitin specific protease, conserved site
IPR028889 : Ubiquitin specific protease domain
IPR029071 : Ubiquitin-related domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0036459 : Molecular Function : ubiquitinyl hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 10.5, extr 8, cyto 3, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000626)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB048915
Rattus
sp. (Rat) : BC098851
Gallus
sp. (Chicken) : CR386278
Pongo
sp. (Orangutan) : CR857421
Bos
sp. (Cow) : ENSBTAT00000013190
Danio
sp. (Zebrafish) : ENSDART00000092032
Equus
sp. (Horse) : ENSECAT00000014040
Oryzias
sp. (Medaka) : ENSORLT00000002091
Pan
sp. (Chimpanzee) : ENSPTRT00000001488
Takifugu
sp. (Fugu) : SINFRUT00000161682
Canis
sp. (Dog) : XM_536697
Monodelphis
sp. (Opossum) : XR_030487
HIX0000626
HIT000012485
(
AK055871
)
(Conserved hypothetical protein.)
genome : 55,593,002 - 55,596,064 (3,063)
query : 1 - 3,063 (3,063/3,063)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 2, cyto 2, mito 2, cyto_nucl 2,
cyto_mito 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000626)
HIX0029299
HIT000096115
(
BC040313
)
Representative transcript
(Hypothetical protein.)
genome : 55,681,081 - 55,683,127 (2,047)
query : 1 - 1,797 (1,797/1,811)
2 exons
identity = 0.997
5'(1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 9, nucl 4, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029299)
HIX0203440
HIT000660256 (
NR_038320
)
(Hypothetical protein.)
genome : 55,681,081 - 55,683,128 (2,048)
query : 1 - 2,048 (2,048/2,048)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, extr 7, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203440)
HIX0161364
HIT000549184 (
ENST00000451250
)
(Hypothetical short protein.)
genome : 55,683,534 - 55,699,850 (16,317)
query : 1 - 638 (638/638)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 9, nucl 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161364)
HIX0161320
HIT000547703 (
ENST00000449769
)
(Nucleotide-diphospho-sugar transferases domain containing protein.)
genome : 55,688,052 - 55,689,045 (994)
query : 1 - 994 (994/994)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, cyto_nucl 9, cyto 8.5, nucl 4.5, mito 4,
E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161320)
HIX0214066
HIT000693837 (
ENST00000581938
)
(Non-protein coding transcript.)
genome : 55,691,314 - 55,691,396 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214066)
HIX0214066
HIT000725681 (
NR_039618
)
(Non-protein coding transcript.)
genome : 55,691,314 - 55,691,396 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214066)
HIX0000609
HIT000037559
(
BC016374
)
(Transmembrane protein 59; Liver membrane-bound protein; Precursor;)
genome : 54,497,350 - 54,518,874 (21,525)
query : 5 - 1,465 (1,461/1,515)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.997
InterPro :
IPR022065 : Uncharacterised protein family, TMEM59
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000609)
HIX0000609
HIT000260629
(
BC062738
)
(Transmembrane protein 59; Liver membrane-bound protein; Precursor;)
genome : 54,497,346 - 54,512,979 (15,634)
query : 4 - 1,197 (1,194/1,223)
7 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;0.993;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR022065 : Uncharacterised protein family, TMEM59
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10, cyto 6, mito 6, extr_plas 6, cyto_mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000609)
HIX0000609
HIT000076458
(
AF290615
)
Representative transcript
(Transmembrane protein 59; Liver membrane-bound protein; Precursor;)
genome : 54,497,350 - 54,519,111 (21,762)
query : 1 - 1,695 (1,695/1,709)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR022065 : Uncharacterised protein family, TMEM59
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000609)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168526
Mus
sp. (Mouse) : AF116911
Tetraodon
sp. (Tetraodon) : AJ427223
Gallus
sp. (Chicken) : AJ719736
Bos
sp. (Cow) : BC102302
Danio
sp. (Zebrafish) : BC155834
Pongo
sp. (Orangutan) : CR859956
Takifugu
sp. (Fugu) : SINFRUT00000143283
Rattus
sp. (Rat) : XM_001059237
Pan
sp. (Chimpanzee) : XM_001150277
Monodelphis
sp. (Opossum) : XM_001380888
Equus
sp. (Horse) : XM_001488738
Canis
sp. (Dog) : XM_536700
HIX0000609
HIT000201602 (
NM_004872
)
(Transmembrane protein 59; Liver membrane-bound protein; Precursor;)
genome : 54,497,350 - 54,519,111 (21,762)
query : 1 - 1,695 (1,695/1,709)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000609)
HIX0000609
HIT000043318
(
AK123445
)
(Transmembrane protein 59; Liver membrane-bound protein; Precursor;)
genome : 54,497,347 - 54,513,686 (16,340)
query : 1 - 1,901 (1,901/1,901)
7 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR022065 : Uncharacterised protein family, TMEM59
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 19, extr 6.5, extr_plas 5, plas 2.5, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000609)
HIX0000609
HIT000352628 (
ENST00000371348
)
(Transmembrane protein 59; Liver membrane-bound protein; Precursor;)
genome : 54,497,347 - 54,513,686 (16,340)
query : 1 - 1,900 (1,900/1,900)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 19, extr 6.5, extr_plas 5, plas 2.5, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000609)
HIX0000609
HIT000104591 (
ENST00000234831
)
(Transmembrane protein 59; Liver membrane-bound protein; Precursor;)
genome : 54,497,349 - 54,519,111 (21,763)
query : 1 - 1,696 (1,696/1,696)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000609)
HIX0000609
HIT000082222
(
AK075187
)
(Transmembrane protein 59; Liver membrane-bound protein; Precursor;)
genome : 54,497,351 - 54,519,051 (21,701)
query : 1 - 1,634 (1,634/1,634)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR022065 : Uncharacterised protein family, TMEM59
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000609)
HIX0000609
HIT000082538
(
AK075505
)
(Transmembrane protein 59; Liver membrane-bound protein; Precursor;)
genome : 54,497,351 - 54,518,874 (21,524)
query : 1 - 1,457 (1,457/1,457)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR022065 : Uncharacterised protein family, TMEM59
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000609)
HIX0000609
HIT000352621 (
ENST00000371341
)
(Transmembrane protein 59; Liver membrane-bound protein; Precursor;)
genome : 54,497,639 - 54,519,177 (21,539)
query : 1 - 1,116 (1,116/1,116)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 19, extr 6.5, extr_plas 5, plas 2.5, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000609)
HIX0000609
HIT000384754
(
AK225624
)
(Transmembrane protein 59; Liver membrane-bound protein; Precursor;)
genome : 54,497,689 - 54,518,876 (21,188)
query : 1 - 1,124 (1,124/1,170)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR022065 : Uncharacterised protein family, TMEM59
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000609)
HIX0000609
HIT000031434
(
BC003106
)
(Transmembrane protein 59; Liver membrane-bound protein; Precursor;)
genome : 54,497,681 - 54,518,860 (21,180)
query : 1 - 1,113 (1,113/1,130)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR022065 : Uncharacterised protein family, TMEM59
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9, extr 8.5, extr_plas 7, plas 4.5,
cyto_golg 4.5, E.R._mito 4, mito 3, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000609)
HIX0000609
HIT000335257
(
BC095464
)
(Transmembrane protein 59; Liver membrane-bound protein; Precursor;)
genome : 54,497,689 - 54,518,903 (21,215)
query : 1 - 1,148 (1,148/1,166)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.996)5'
coverage = 1.000
InterPro :
IPR022065 : Uncharacterised protein family, TMEM59
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000609)
HIX0000609
HIT000001739
(
AF047439
)
(Transmembrane protein 59; Liver membrane-bound protein; Precursor;)
genome : 54,497,689 - 54,518,874 (21,186)
query : 3 - 1,120 (1,118/1,138)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995)5'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000609)
HIX0000609
HIT000253073
(
AY359029
)
(Transmembrane protein 59; Liver membrane-bound protein; Precursor;)
genome : 54,497,690 - 54,518,921 (21,232)
query : 10 - 1,174 (1,165/1,174)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.996)5'
coverage = 0.992
InterPro :
IPR022065 : Uncharacterised protein family, TMEM59
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000609)
HIX0000609
HIT000537953 (
ENST00000440019
)
(Transmembrane protein 59; Liver membrane-bound protein; Precursor;)
genome : 54,502,272 - 54,519,114 (16,843)
query : 1 - 618 (618/618)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 20, extr 6.5, extr_plas 4.5, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000609)
HIX0000609
HIT000518672 (
ENST00000420738
)
(Transmembrane protein 59; Liver membrane-bound protein; Precursor;)
genome : 54,502,272 - 54,519,085 (16,814)
query : 1 - 728 (728/728)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 20, extr 6.5, extr_plas 4.5, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000609)
HIX0000609
HIT000550355 (
ENST00000452421
)
(Transmembrane protein 59; Liver membrane-bound protein; Precursor;)
genome : 54,502,275 - 54,519,078 (16,804)
query : 1 - 1,074 (1,074/1,074)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000609)
HIX0000609
HIT000352617 (
ENST00000371337
)
(Transmembrane protein 59; Liver membrane-bound protein; Precursor;)
genome : 54,511,159 - 54,518,865 (7,707)
query : 1 - 600 (600/600)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000609)
HIX0214402
HIT000625169 (
ENST00000525949
)
(CUB domain-containing protein 2 precursor.)
genome : 54,606,897 - 54,638,367 (31,471)
query : 1 - 547 (547/547)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 3, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214402)
HIX0214402
HIT000042633
(
AK122760
)
Representative transcript
(NADH-cytochrome b5 reductase-like.)
genome : 54,609,065 - 54,665,746 (56,682)
query : 1 - 2,381 (2,381/2,381)
8 exons
identity = 0.996
3'(0.994;1.000;1.000;0.990;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.6.2.2
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
InterPro :
IPR019180 : Oxidoreductase-like, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 9.5, cyto_nucl 7.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214402)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_513422
HIX0214402
HIT000119189 (
ENST00000311841
)
(NADH-cytochrome b5 reductase-like.)
genome : 54,609,065 - 54,665,746 (56,682)
query : 1 - 2,382 (2,382/2,382)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.6.2.2
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 9.5, cyto_nucl 7.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214402)
HIX0000615
HIT000206906 (
NM_018070
)
(Single-stranded DNA-binding protein 3 isoform b.)
genome : 54,691,104 - 54,872,068 (180,965)
query : 1 - 3,194 (3,194/3,199)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 11.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000615)
HIX0000615
HIT000213282 (
NM_145716
)
(Single-stranded DNA-binding protein 3; Sequence-specific single-stranded-DNA-binding protein;)
genome : 54,691,104 - 54,872,068 (180,965)
query : 1 - 3,254 (3,254/3,259)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 10.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000615)
HIX0000615
HIT000316686 (
NM_001009955
)
(Single-stranded DNA-binding protein 3 isoform c.)
genome : 54,691,104 - 54,872,068 (180,965)
query : 1 - 3,173 (3,173/3,178)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15, cyto 11.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000615)
HIX0000615
HIT000018832
(
AK093975
)
(Single-stranded DNA-binding protein 3 isoform a.)
genome : 54,692,196 - 54,822,491 (130,296)
query : 1 - 1,823 (1,823/1,823)
14 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 16, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000615)
HIX0000615
HIT000124787 (
ENST00000326956
)
(Single-stranded DNA-binding protein 3 isoform a.)
genome : 54,692,196 - 54,822,491 (130,296)
query : 1 - 1,822 (1,822/1,822)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 16, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000615)
HIX0000615
HIT000352600 (
ENST00000371320
)
(Single-stranded DNA-binding protein 3; Sequence-specific single-stranded-DNA-binding protein;)
genome : 54,692,305 - 54,872,092 (179,788)
query : 1 - 2,077 (2,077/2,077)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000615)
HIX0000615
HIT000515598 (
ENST00000417664
)
(Single-stranded DNA-binding protein 3 isoform a.)
genome : 54,692,305 - 54,871,177 (178,873)
query : 1 - 1,666 (1,666/1,666)
18 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.937)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 16, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000615)
HIX0000615
HIT000422271
(
AK289474
)
(Single-stranded DNA-binding protein 3 isoform c.)
genome : 54,692,312 - 54,871,690 (179,379)
query : 1 - 1,587 (1,587/1,587)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006594 : LIS1 homology motif
IPR008116 : Sequence-specific single-strand DNA-binding protein
GO :
0003697 : Molecular Function : single-stranded DNA binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000615)
HIX0000615
HIT000352599 (
ENST00000371319
)
(Single-stranded DNA-binding protein 3 isoform c.)
genome : 54,692,312 - 54,871,681 (179,370)
query : 1 - 1,578 (1,578/1,578)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000615)
HIX0000615
HIT000031870
(
BC004335
)
(Single-stranded DNA-binding protein 3 isoform c.)
genome : 54,692,355 - 54,717,524 (25,170)
query : 1 - 1,100 (1,100/1,142)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 7, mito 5, extr 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000615)
HIX0000615
HIT000633018 (
ENST00000533946
)
(Single-stranded DNA-binding protein 3 isoform a.)
genome : 54,692,331 - 54,870,306 (177,976)
query : 1 - 420 (420/431)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12, nucl 8.5, extr 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000615)
HIX0000615
HIT000262256
(
BC066365
)
Representative transcript
(Single-stranded DNA-binding protein 3; Sequence-specific single-stranded-DNA-binding protein;)
genome : 54,692,355 - 54,871,812 (179,458)
query : 1 - 1,747 (1,747/1,761)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006594 : LIS1 homology motif
IPR008116 : Sequence-specific single-strand DNA-binding protein
GO :
0003697 : Molecular Function : single-stranded DNA binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000615)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB047956
Mus
sp. (Mouse) : AK017711
Rattus
sp. (Rat) : AY724490
Danio
sp. (Zebrafish) : BC068380
Bos
sp. (Cow) : BC151395
Oryzias
sp. (Medaka) : ENSORLT00000017474
Pongo
sp. (Orangutan) : ENSPPYT00000001581
Tetraodon
sp. (Tetraodon) : GSTENT00006522001
Tetraodon
sp. (Tetraodon) : GSTENT00020213001
Takifugu
sp. (Fugu) : SINFRUT00000142269
Takifugu
sp. (Fugu) : SINFRUT00000144457
Gallus
sp. (Chicken) : U68380
Equus
sp. (Horse) : XM_001492735
Pan
sp. (Chimpanzee) : XM_513424
Canis
sp. (Dog) : XM_848109
Pan
sp. (Chimpanzee) : XR_020583
HIX0000615
HIT000003691
(
AK001217
)
(Single-stranded DNA-binding protein 3 isoform a.)
genome : 54,692,356 - 54,747,200 (54,845)
query : 12 - 1,350 (1,339/1,350)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 16, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000615)
HIX0000615
HIT000080931
(
AF500116
)
(Single-stranded DNA-binding protein 3 isoform b.)
genome : 54,692,594 - 54,871,896 (179,303)
query : 1 - 1,532 (1,532/1,561)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006594 : LIS1 homology motif
IPR008116 : Sequence-specific single-strand DNA-binding protein
GO :
0003697 : Molecular Function : single-stranded DNA binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000615)
HIX0000615
HIT000031634
(
BC003605
)
(Single-stranded DNA-binding protein 3 isoform b.)
genome : 54,692,594 - 54,871,707 (179,114)
query : 1 - 1,343 (1,343/1,372)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006594 : LIS1 homology motif
IPR008116 : Sequence-specific single-strand DNA-binding protein
GO :
0003697 : Molecular Function : single-stranded DNA binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000615)
HIX0000615
HIT000524084 (
ENST00000426150
)
(Single-stranded DNA-binding protein 3 isoform a.)
genome : 54,693,928 - 54,791,112 (97,185)
query : 1 - 851 (851/851)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 13.5, cyto 13.5, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000615)
HIX0020481
HIT000659929 (
NR_037639
)
(Tetratricopeptide-like helical domain containing protein.)
genome : 55,107,427 - 55,208,330 (100,904)
query : 1 - 6,472 (6,472/6,472)
33 exons
identity = 1.000
5'(0.995;1.000;0.998;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 12, extr 3, plas 2, mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000659930 (
NR_037640
)
(Armadillo-like helical domain containing protein.)
genome : 55,107,427 - 55,208,330 (100,904)
query : 1 - 6,339 (6,339/6,339)
33 exons
identity = 1.000
5'(0.995;1.000;0.998;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 9.5, nucl 6.5, E.R. 4, pero 3.5,
mito_pero 3.5, mito 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000659931 (
NR_037641
)
(Conserved hypothetical protein.)
genome : 55,107,427 - 55,208,330 (100,904)
query : 1 - 6,118 (6,118/6,118)
33 exons
identity = 1.000
5'(0.995;1.000;0.998;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8, nucl 6, cyto_plas 6, pero 5.5, plas 4, E.R. 4,
mito_pero 4, cyto_golg 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000366427 (
NM_001039464
)
(Armadillo-like helical domain containing protein.)
genome : 55,107,427 - 55,175,939 (68,513)
query : 1 - 4,375 (4,375/4,394)
24 exons
identity = 0.999
5'(0.995;1.000;0.998;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 9.5, nucl 7.5, E.R. 4, pero 3.5,
mito_pero 3.5, mito 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000562967 (
NR_026782
)
(Armadillo-like helical domain containing protein.)
genome : 55,107,427 - 55,175,939 (68,513)
query : 1 - 4,385 (4,385/4,404)
24 exons
identity = 0.999
5'(0.995;1.000;0.998;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
E.R._mito 7.66667, extr 7.5, mito_pero 7, cyto 6.5,
mito 6.5, cyto_pero 6.16667, extr_plas 5.5, pero 4.5, E.R. 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000050953
(
BC028620
)
(Maestro heat-like repeat-containing protein family member 7.)
genome : 55,107,459 - 55,207,406 (99,948)
query : 6 - 5,165 (5,160/5,183)
33 exons
identity = 0.997
5'(0.989;1.000;0.996;1.000;1.000;1.000;1.000;
1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;0.993;0.991;0.993;0.994;0.993;1.000;
1.000;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8, nucl 6, cyto_plas 6, pero 5.5, plas 4, E.R. 4,
mito_pero 4, cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000512084 (
ENST00000414150
)
(Conserved hypothetical protein.)
genome : 55,107,459 - 55,207,904 (100,446)
query : 1 - 5,660 (5,660/5,660)
33 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8, nucl 6, cyto_plas 6, pero 5.5, plas 4, E.R. 4,
mito_pero 4, cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000306758
(
CR749830
)
Representative transcript
(Maestro heat-like repeat-containing protein family member 7.)
genome : 55,107,460 - 55,207,981 (100,522)
query : 1 - 6,089 (6,089/6,212)
33 exons
identity = 0.998
5'(0.989;1.000;0.997;1.000;1.000;1.000;1.000;
0.992;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;0.989;0.992;1.000;1.000;1.000;
1.000;0.995;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 10, extr 7, plas 5, mito 4.5, E.R._mito 4.33333,
cyto_mito 4.16667, cyto 2.5, cysk_plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000523234 (
ENST00000425300
)
(Conserved hypothetical protein.)
genome : 55,107,460 - 55,207,981 (100,522)
query : 1 - 5,951 (5,951/5,951)
32 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9, nucl 6, cyto_plas 6, pero 5.5, E.R. 4,
mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000497070
(
AK302446
)
(Maestro heat-like repeat-containing protein family member 7; HEAT repeat-containing protein 8;)
genome : 55,107,466 - 55,175,932 (68,467)
query : 1 - 4,329 (4,329/4,329)
24 exons
identity = 0.998
5'(0.994;1.000;0.997;1.000;1.000;1.000;0.992;
1.000;0.990;0.993;0.991;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 9, nucl 7.5, pero 4.5, E.R. 4,
mito_pero 4, mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000518964 (
ENST00000421030
)
(Armadillo-like helical domain containing protein.)
genome : 55,107,466 - 55,175,932 (68,467)
query : 1 - 4,329 (4,329/4,329)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 9.5, nucl 7.5, E.R. 4, pero 3.5,
mito_pero 3.5, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000497327
(
AK302703
)
(Conserved hypothetical protein.)
genome : 55,107,466 - 55,166,085 (58,620)
query : 1 - 1,886 (1,886/1,886)
15 exons
identity = 0.998
5'(0.994;1.000;1.000;1.000;0.992;1.000;1.000;
0.993;1.000;0.994;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 10.3333, cyto_mito 8.83333,
plas 4.5, nucl 4.5, pero 4, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000644289 (
ENST00000545244
)
(Conserved hypothetical protein.)
genome : 55,107,466 - 55,166,085 (58,620)
query : 1 - 1,886 (1,886/1,886)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 10.3333, cyto_mito 8.83333,
plas 4.5, nucl 4.5, pero 4, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000056735
(
BX648088
)
(Maestro heat-like repeat-containing protein family member 7.)
genome : 55,107,473 - 55,207,904 (100,432)
query : 1 - 5,866 (5,866/5,873)
33 exons
identity = 0.997
5'(0.988;1.000;0.995;1.000;1.000;0.988;1.000;
1.000;1.000;0.993;1.000;0.994;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;0.987;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.992;
0.989;1.000;1.000;1.000;0.999)3'
coverage = 0.999
InterPro :
IPR011989 : Armadillo-like helical
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 9.5, nucl 6.5, E.R. 4, pero 3.5,
mito_pero 3.5, mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000132183 (
ENST00000339553
)
(Conserved hypothetical protein.)
genome : 55,107,473 - 55,165,881 (58,409)
query : 1 - 3,413 (3,413/3,413)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, nucl 7, cyto_plas 7, plas 4, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000502925
(
BC144516
)
(Maestro heat-like repeat-containing protein family member 7.)
genome : 55,107,474 - 55,175,914 (68,441)
query : 1 - 4,147 (4,147/4,147)
23 exons
identity = 0.998
5'(0.988;1.000;0.997;1.000;1.000;1.000;1.000;
1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.994;0.994;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 13, mito 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000537981 (
ENST00000440047
)
(Conserved hypothetical protein.)
genome : 55,107,474 - 55,175,914 (68,441)
query : 1 - 4,148 (4,148/4,148)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13.5, cyto 13.5, mito 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000496518
(
AK301894
)
(Maestro heat-like repeat-containing protein family member 7.)
genome : 55,107,481 - 55,175,935 (68,455)
query : 1 - 2,975 (2,975/2,975)
22 exons
identity = 0.998
5'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;0.987;0.992;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 7, plas 6, mito_pero 3, cysk_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000508016 (
ENST00000409996
)
(Armadillo-like helical domain containing protein.)
genome : 55,107,481 - 55,175,935 (68,455)
query : 1 - 2,977 (2,977/2,977)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 11.3333, cyto_mito 8.83333,
nucl 6.5, plas 3.5, pero 3, extr_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000552789 (
ENST00000454855
)
(Armadillo-like helical domain containing protein.)
genome : 55,107,481 - 55,175,935 (68,455)
query : 1 - 2,975 (2,975/2,975)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 7, plas 6, mito_pero 3, cysk_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000479055 (
ENST00000395690
)
(Conserved hypothetical protein.)
genome : 55,107,495 - 55,165,896 (58,402)
query : 1 - 3,413 (3,413/3,413)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, nucl 7, cyto_plas 7, plas 4, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000049318
(
AK130047
)
(Maestro heat-like repeat-containing protein family member 7.)
genome : 55,116,910 - 55,175,939 (59,030)
query : 1 - 4,548 (4,548/4,548)
21 exons
identity = 0.997
5'(0.989;0.997;1.000;1.000;1.000;1.000;1.000;
0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8, nucl 6, cyto_plas 6, pero 5.5, plas 4, E.R. 4,
mito_pero 4, cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000511122 (
ENST00000413188
)
(Conserved hypothetical protein.)
genome : 55,116,910 - 55,175,939 (59,030)
query : 1 - 4,542 (4,542/4,542)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8, nucl 6, cyto_plas 6, pero 5.5, plas 4, E.R. 4,
mito_pero 4, cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000335271
(
BC095478
)
(Armadillo-like helical domain containing protein.)
genome : 55,117,618 - 55,175,933 (58,316)
query : 8 - 4,181 (4,174/4,343)
23 exons
identity = 0.999
5'(1.000;0.997;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000)3'
coverage = 0.998
InterPro :
IPR011989 : Armadillo-like helical
SOSUI :
SOLUBLE PROTEIN
PSORT :
E.R._mito 7.66667, extr 7.5, mito_pero 7, cyto 6.5,
mito 6.5, cyto_pero 6.16667, extr_plas 5.5, pero 4.5, E.R. 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000520593 (
ENST00000422659
)
(Armadillo-like helical domain containing protein.)
genome : 55,117,618 - 55,175,933 (58,316)
query : 1 - 4,174 (4,174/4,174)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
E.R._mito 7.66667, extr 7.5, mito_pero 7, cyto 6.5,
mito 6.5, cyto_pero 6.16667, extr_plas 5.5, pero 4.5, E.R. 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000388718
(
BC126126
)
(Conserved hypothetical protein.)
genome : 55,118,562 - 55,165,896 (47,335)
query : 1 - 3,195 (3,195/3,195)
17 exons
identity = 0.998
5'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, nucl 7, cyto_plas 7, plas 4, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000502332
(
BC143891
)
(Conserved hypothetical protein.)
genome : 55,118,562 - 55,165,889 (47,328)
query : 1 - 3,181 (3,181/3,181)
17 exons
identity = 0.998
5'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, nucl 7, cyto_plas 7, plas 4, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000502333
(
BC143892
)
(Conserved hypothetical protein.)
genome : 55,118,564 - 55,165,896 (47,333)
query : 1 - 3,362 (3,362/3,362)
18 exons
identity = 0.998
5'(0.996;1.000;0.988;1.000;1.000;1.000;1.000;
0.987;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8, nucl 6, cyto_plas 6, pero 5.5, plas 4, E.R. 4,
mito_pero 4, cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000536780 (
ENST00000438846
)
(Conserved hypothetical protein.)
genome : 55,118,564 - 55,165,896 (47,333)
query : 1 - 3,362 (3,362/3,362)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8, nucl 6, cyto_plas 6, pero 5.5, plas 4, E.R. 4,
mito_pero 4, cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000027404
(
AL832492
)
(Conserved hypothetical protein.)
genome : 55,119,035 - 55,175,939 (56,905)
query : 1 - 3,817 (3,817/3,836)
24 exons
identity = 0.998
5'(0.997;1.000;1.000;1.000;0.992;0.990;1.000;
0.993;0.991;1.000;1.000;1.000;0.995;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12, nucl 4.5, E.R._mito 4.5,
mito 3.5, E.R. 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000024384
(
AL096749
)
(Armadillo-like helical domain containing protein.)
genome : 55,119,760 - 55,175,934 (56,175)
query : 1 - 2,658 (2,658/2,688)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 10, cyto_nucl 3, nucl 2.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000538151 (
ENST00000440217
)
(Armadillo-like helical domain containing protein.)
genome : 55,119,760 - 55,175,934 (56,175)
query : 1 - 2,658 (2,658/2,658)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 10, cyto_nucl 3, nucl 2.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000046881
(
AK127008
)
(Maestro heat-like repeat-containing protein family member 7.)
genome : 55,164,969 - 55,207,980 (43,012)
query : 1 - 3,637 (3,637/3,637)
17 exons
identity = 0.999
5'(1.000;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 5, mito 5, mito_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0020481
HIT000565095 (
ENST00000460155
)
(Tetratricopeptide-like helical domain containing protein.)
genome : 55,164,969 - 55,207,904 (42,936)
query : 1 - 3,561 (3,561/3,561)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 12, extr 3, plas 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020481)
HIX0180022
pHIT000001515 ( pHIT000001515 )
Representative transcript
(Conserved hypothetical protein.)
genome : 54,203,342 - 54,203,737 (396)
query : 1 - 396 (396/396)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0180022)
CAGE tag :
H04BA95O0501,H08BA06K1006,H08BA12I0811
H08BA14A2303,H09BA93H0307
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF486579
Equus
sp. (Horse) : XM_001915700
Canis
sp. (Dog) : XM_546702
Bos
sp. (Cow) : XM_615122
Pan
sp. (Chimpanzee) : XR_020189
HIX0000623
eHIT000012275 ( ESTsASS_1_2281 )
(Non-protein coding transcript.)
genome : 55,247,269 - 55,266,659 (19,391)
query : 1 - 1,180 (1,180/1,180)
7 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000623)
ESTs used for assembly :
AA782829,AA771735,BF511635,H79241
BF511638,AI984641
AL049745.9
54200001-54307683 F -
NCBI
AL391003.15
54307684-54319444 F +
NCBI
AL031427.15
54319445-54471481 F +
NCBI
AL353898.10
54471482-54568756 F +
NCBI
AL161915.8
54568757-54588482 F +
NCBI
AL357673.12
54588483-54682199 F +
NCBI
AL161644.6
54682200-54763662 F +
NCBI
AL354778.6
54763663-54799228 F +
NCBI
AL035415.22
54799229-54933714 F -
NCBI
AC099796.2
54933715-55063319 F +
NCBI
AL590093.10
55063320-55123804 F +
NCBI
AL139244.21
55123805-55250960 F +
NCBI
AC096536.2
55250961-55404885 F +
NCBI
AL590440.1
55404886-55465798 F +
NCBI
AL589790.22
55465799-55509873 F +
NCBI
AC091609.2
55509874-55693390 F -
NCBI
AL672061.2
55693391-55782838 F +
NCBI
AL049710.18
55782839-55800000 F -
NCBI