bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0203822
HIT000615599 (
ENST00000516196
)
(Non-protein coding transcript.)
genome : 74,349,396 - 74,349,505 (110)
query : 1 - 110 (110/110)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203822)
HIX0000699
HIT000485782 (
NM_001105659
)
(Leucine-rich repeat and IQ domain-containing protein 3.)
genome : 74,491,699 - 74,663,871 (172,173)
query : 1 - 2,865 (2,865/2,865)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000699)
HIX0000699
HIT000478475 (
ENST00000395089
)
(Leucine-rich repeat and IQ domain-containing protein 3.)
genome : 74,491,699 - 74,649,368 (157,670)
query : 1 - 2,673 (2,673/2,673)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000699)
HIX0000699
HIT000515001 (
ENST00000417067
)
(Leucine-rich repeat and IQ domain-containing protein 3.)
genome : 74,491,699 - 74,540,474 (48,776)
query : 1 - 1,085 (1,085/1,085)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11.5, extr 6, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000699)
HIX0000699
HIT000308729 (
ENST00000354431
)
(Leucine-rich repeat and IQ domain-containing protein 3.)
genome : 74,491,715 - 74,663,871 (172,157)
query : 1 - 2,849 (2,849/2,849)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000699)
HIX0000699
HIT000260686
(
BC062795
)
(Leucine-rich repeat and IQ domain-containing protein 3.)
genome : 74,491,927 - 74,507,531 (15,605)
query : 4 - 1,365 (1,362/1,397)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000699)
HIX0000699
HIT000513694 (
ENST00000415760
)
(Leucine-rich repeat and IQ domain-containing protein 3.)
genome : 74,491,925 - 74,663,871 (171,947)
query : 1 - 4,524 (4,524/4,524)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 9, extr 7, cyto_mito 7, cyto_pero 7,
cyto_golg 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000699)
HIX0000699
HIT000249764
(
AK131476
)
Representative transcript
(Leucine-rich repeat and IQ domain-containing protein 3.)
genome : 74,491,925 - 74,663,828 (171,904)
query : 1 - 4,483 (4,483/4,483)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.999;0.994;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 9, extr 7, cyto_mito 7, cyto_pero 7,
cyto_golg 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000699)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK132656
Rattus
sp. (Rat) : BC078994
Bos
sp. (Cow) : BC151434
Equus
sp. (Horse) : ENSECAT00000014395
Monodelphis
sp. (Opossum) : ENSMODT00000040072
Macaca
sp. (Macaque) : XM_001097148
Danio
sp. (Zebrafish) : XM_001339983
Pan
sp. (Chimpanzee) : XM_513491
Canis
sp. (Dog) : XM_537114
HIX0000699
HIT000573310 (
ENST00000468759
)
(Leucine-rich repeat and IQ domain-containing protein 3.)
genome : 74,549,477 - 74,621,533 (72,057)
query : 1 - 795 (795/795)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000699)
HIX0000699
HIT000352189 (
ENST00000370909
)
(Leucine-rich repeat and IQ domain-containing protein 3.)
genome : 74,549,811 - 74,663,839 (114,029)
query : 1 - 793 (793/793)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13.8333, cyto_pero 12.6667,
nucl 6, pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000699)
HIX0000699
HIT000542918 (
ENST00000444984
)
(Leucine-rich repeat and IQ domain-containing protein 3.)
genome : 74,610,068 - 74,649,195 (39,128)
query : 1 - 372 (372/372)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 10, cyto_nucl 9.83333,
cyto_plas 8.83333, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000699)
HIX0000699
HIT000598551 (
ENST00000495179
)
(Leucine-rich repeat and IQ domain-containing protein 3.)
genome : 74,621,347 - 74,648,306 (26,960)
query : 1 - 289 (289/289)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12, extr 6, mito 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000699)
HIX0000699
HIT000038953
(
BC020778
)
(Leucine-rich repeat and IQ domain-containing protein 3.)
genome : 74,645,593 - 74,663,831 (18,239)
query : 1 - 1,589 (1,589/1,617)
4 exons
identity = 0.998
3'(0.999;1.000;1.000;0.987)5'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR025875 : Leucine rich repeat 4
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, extr 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000699)
HIX0000699
HIT000352191 (
ENST00000370911
)
(Leucine-rich repeat and IQ domain-containing protein 3.)
genome : 74,645,591 - 74,663,831 (18,241)
query : 1 - 1,591 (1,591/1,591)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, extr 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000699)
HIX0000699
HIT000055857
(
BX647210
)
(Leucine-rich repeat and IQ domain-containing protein 3.)
genome : 74,645,907 - 74,663,831 (17,925)
query : 1 - 3,614 (3,614/3,684)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, plas 2, mito 2, E.R. 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000699)
HIX0000699
HIT000568506 (
ENST00000463724
)
(Leucine-rich repeat and IQ domain-containing protein 3.)
genome : 74,645,907 - 74,663,831 (17,925)
query : 1 - 3,614 (3,614/3,614)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, plas 2, mito 2, E.R. 2, E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000699)
HIX0000700
HIT000200632 (
NM_003838
)
(L-fucokinase domain containing protein.)
genome : 74,663,896 - 74,674,148 (10,253)
query : 1 - 4,484 (4,484/4,499)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.7.30
KEGG pathway :
00051 : Fructose and mannose metabolism (61)
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11.5, nucl 10.5, mito 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000700)
HIX0000700
HIT000656529 (
NM_001199328
)
(L-fucokinase domain containing protein.)
genome : 74,663,896 - 74,674,148 (10,253)
query : 1 - 3,722 (3,722/3,737)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.7.30
KEGG pathway :
00051 : Fructose and mannose metabolism (61)
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 10.5, cyto_nucl 10.5, cyto 9.5, mito 5, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000700)
HIX0000700
HIT000656530 (
NM_001199329
)
(Conserved hypothetical protein.)
genome : 74,663,896 - 74,674,148 (10,253)
query : 1 - 3,667 (3,667/3,682)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.7.30
KEGG pathway :
00051 : Fructose and mannose metabolism (61)
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 8.5, cyto_nucl 8, mito_pero 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000700)
HIX0000700
HIT000572182 (
ENST00000467578
)
(Conserved hypothetical protein.)
genome : 74,663,922 - 74,670,277 (6,356)
query : 1 - 601 (601/601)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000700)
HIX0000700
HIT000090222
(
BC020720
)
(Fucose-1-phosphate guanylyltransferase; EC=2.7.7.30; GDP-L-fucose diphosphorylase; GDP-L-fucose pyrophosphorylase;)
genome : 74,663,922 - 74,670,222 (6,301)
query : 1 - 532 (532/563)
4 exons
identity = 0.998
5'(1.000;0.994;1.000;1.000)3'
coverage = 0.996
EC number :
EC 2.7.7.30
KEGG pathway :
00051 : Fructose and mannose metabolism (61)
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
InterPro :
IPR012887 : L-fucokinase
GO :
0016772 : Molecular Function : transferase activity, transferring phosphorus-containing groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 15.5, cyto 10, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000700)
HIX0000700
HIT000489572
(
AK294948
)
(Fucose-1-phosphate guanylyltransferase isoform 3.)
genome : 74,663,924 - 74,699,770 (35,847)
query : 1 - 1,167 (1,167/1,167)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.7.7.30
KEGG pathway :
00051 : Fructose and mannose metabolism (61)
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
InterPro :
IPR012887 : L-fucokinase
GO :
0016772 : Molecular Function : transferase activity, transferring phosphorus-containing groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 7, cyto_nucl 7, nucl 6.5, extr_plas 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000700)
HIX0000700
HIT000624163 (
ENST00000524915
)
(L-fucokinase domain containing protein.)
genome : 74,663,924 - 74,699,770 (35,847)
query : 1 - 1,167 (1,167/1,167)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 7, cyto_nucl 7, nucl 6.5, extr_plas 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000700)
HIX0000700
HIT000352178 (
ENST00000370898
)
(L-fucokinase domain containing protein.)
genome : 74,663,926 - 74,672,918 (8,993)
query : 1 - 3,224 (3,224/3,224)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.7.30
KEGG pathway :
00051 : Fructose and mannose metabolism (61)
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, cyto_nucl 15, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000700)
HIX0000700
HIT000062427
(
AF017445
)
(Fucose-1-phosphate guanylyltransferase; EC=2.7.7.30; GDP-L-fucose diphosphorylase; GDP-L-fucose pyrophosphorylase;)
genome : 74,663,926 - 74,672,825 (8,900)
query : 1 - 3,130 (3,130/3,144)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 2.7.7.30
KEGG pathway :
00051 : Fructose and mannose metabolism (61)
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
InterPro :
IPR011004 : Trimeric LpxA-like
IPR012887 : L-fucokinase
IPR029044 : Nucleotide-diphospho-sugar transferases
GO :
0016772 : Molecular Function : transferase activity, transferring phosphorus-containing groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, cyto_nucl 15, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000700)
HIX0000700
HIT000586053 (
ENST00000482102
)
(Conserved hypothetical protein.)
genome : 74,663,926 - 74,670,175 (6,250)
query : 1 - 561 (561/561)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10.5, mito 8, nucl 6.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000700)
HIX0000700
HIT000352174 (
ENST00000370894
)
(Conserved hypothetical protein.)
genome : 74,663,928 - 74,671,890 (7,963)
query : 1 - 1,377 (1,377/1,377)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 11.5, extr 6, mito 4, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000700)
HIX0000700
HIT000499114
(
AK304490
)
(FPGT-TNNI3K fusion protein isoform b.)
genome : 74,663,928 - 74,671,890 (7,963)
query : 1 - 1,377 (1,377/1,377)
4 exons
identity = 0.999
5'(1.000;1.000;0.989;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 11.5, extr 6, mito 4, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000700)
HIX0000700
HIT000628642 (
ENST00000529485
)
(Conserved hypothetical protein.)
genome : 74,663,928 - 74,670,151 (6,224)
query : 1 - 582 (582/582)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, nucl 9.5, cyto 9.5, mito 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000700)
HIX0000700
HIT000331034
(
AK223254
)
(Fucose-1-phosphate guanylyltransferase; EC=2.7.7.30; GDP-L-fucose diphosphorylase; GDP-L-fucose pyrophosphorylase;)
genome : 74,663,929 - 74,671,782 (7,854)
query : 1 - 2,086 (2,086/2,086)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.7.7.30
KEGG pathway :
00051 : Fructose and mannose metabolism (61)
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
InterPro :
IPR011004 : Trimeric LpxA-like
IPR012887 : L-fucokinase
IPR029044 : Nucleotide-diphospho-sugar transferases
GO :
0016772 : Molecular Function : transferase activity, transferring phosphorus-containing groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, cyto_nucl 15, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000700)
HIX0000700
HIT000041478
(
BC032308
)
Representative transcript
(Fucose-1-phosphate guanylyltransferase; EC=2.7.7.30; GDP-L-fucose diphosphorylase; GDP-L-fucose pyrophosphorylase;)
genome : 74,663,940 - 74,672,923 (8,984)
query : 1 - 3,215 (3,215/3,341)
4 exons
identity = 0.998
5'(1.000;0.994;1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.7.7.30
KEGG pathway :
00051 : Fructose and mannose metabolism (61)
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
InterPro :
IPR011004 : Trimeric LpxA-like
IPR012887 : L-fucokinase
IPR029044 : Nucleotide-diphospho-sugar transferases
GO :
0016772 : Molecular Function : transferase activity, transferring phosphorus-containing groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, cyto_nucl 15, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000700)
HIX0000700
HIT000494092
(
AK299468
)
(Fucose-1-phosphate guanylyltransferase isoform 3.)
genome : 74,663,951 - 74,671,907 (7,957)
query : 1 - 1,426 (1,426/1,426)
5 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.7.7.30
KEGG pathway :
00051 : Fructose and mannose metabolism (61)
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
InterPro :
IPR011004 : Trimeric LpxA-like
IPR012887 : L-fucokinase
GO :
0016772 : Molecular Function : transferase activity, transferring phosphorus-containing groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 14, nucl 11, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000700)
HIX0000700
HIT000633121 (
ENST00000534056
)
(L-fucokinase domain containing protein.)
genome : 74,663,951 - 74,671,907 (7,957)
query : 1 - 1,426 (1,426/1,426)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.7.30
KEGG pathway :
00051 : Fructose and mannose metabolism (61)
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 14, nucl 11, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000700)
HIX0000700
HIT000576465 (
ENST00000472069
)
(L-fucokinase domain containing protein.)
genome : 74,664,035 - 74,670,261 (6,227)
query : 1 - 524 (524/524)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 17, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000700)
HIX0000700
HIT000046194
(
AK126321
)
(Domain of unknown function DUF1725 domain containing protein.)
genome : 74,673,803 - 74,677,748 (3,946)
query : 1 - 3,949 (3,949/3,950)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
InterPro :
IPR013544 : Domain of unknown function DUF1725
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 17, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000700)
HIX0029366
HIT000098605
(
BC047470
)
Representative transcript
(Hypothetical short protein.)
genome : 74,684,121 - 74,685,079 (959)
query : 1 - 958 (958/973)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, plas 5, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029366)
HIX0023748
HIT000205760 (
NM_015978
)
(Serine/threonine-protein kinase TNNI3K; EC=2.7.11.1; Cardiac ankyrin repeat kinase; Cardiac troponin I-interacting kinase; TNNI3-interacting kinase;)
genome : 74,701,071 - 75,010,116 (309,046)
query : 1 - 3,023 (3,023/3,026)
25 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 16, nucl 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023748)
HIX0023748
HIT000070066
(
AF116826
)
Representative transcript
(Serine/threonine-protein kinase TNNI3K; EC=2.7.11.1; Cardiac ankyrin repeat kinase; Cardiac troponin I-interacting kinase; TNNI3-interacting kinase;)
genome : 74,701,085 - 75,010,108 (309,024)
query : 1 - 3,001 (3,001/3,001)
25 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0004672 : Molecular Function : protein kinase activity
0005515 : Molecular Function : protein binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 16, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023748)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AY526095
Bos
sp. (Cow) : BC126675
Pongo
sp. (Orangutan) : CR860467
Gallus
sp. (Chicken) : ENSGALT00000018524
Oryzias
sp. (Medaka) : ENSORLT00000004966
Rattus
sp. (Rat) : ENSRNOT00000030341
Tetraodon
sp. (Tetraodon) : GSTENT00020216001
Takifugu
sp. (Fugu) : SINFRUT00000144446
Macaca
sp. (Macaque) : XM_001097254
Danio
sp. (Zebrafish) : XM_001339921
Monodelphis
sp. (Opossum) : XM_001378103
Equus
sp. (Horse) : XM_001918279
Pan
sp. (Chimpanzee) : XM_513493
Canis
sp. (Dog) : XM_537112
HIX0023748
HIT000124652 (
ENST00000326637
)
(Serine/threonine-protein kinase TNNI3K; EC=2.7.11.1; Cardiac ankyrin repeat kinase; Cardiac troponin I-interacting kinase; TNNI3-interacting kinase;)
genome : 74,701,085 - 75,010,108 (309,024)
query : 1 - 3,001 (3,001/3,001)
25 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 16, nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023748)
HIX0023748
HIT000426850
(
AK307984
)
(Serine/threonine-protein kinase TNNI3K; EC=2.7.11.1; Cardiac ankyrin repeat kinase; Cardiac troponin I-interacting kinase; TNNI3-interacting kinase;)
genome : 74,701,090 - 75,010,087 (308,998)
query : 2 - 2,977 (2,976/2,977)
25 exons
identity = 0.998
5'(1.000;0.991;1.000;1.000;1.000;0.990;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.981;1.000;1.000;
1.000;1.000;1.000;0.996)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0004672 : Molecular Function : protein kinase activity
0005515 : Molecular Function : protein binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 16, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023748)
HIX0023748
HIT000386992
(
BC113539
)
(Serine/threonine-protein kinase TNNI3K; EC=2.7.11.1; Cardiac ankyrin repeat kinase; Cardiac troponin I-interacting kinase; TNNI3-interacting kinase;)
genome : 74,701,097 - 75,009,730 (308,634)
query : 1 - 2,611 (2,611/2,611)
25 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0004672 : Molecular Function : protein kinase activity
0005515 : Molecular Function : protein binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 16, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023748)
HIX0023748
HIT000387552
(
BC117262
)
(Serine/threonine-protein kinase TNNI3K; EC=2.7.11.1; Cardiac ankyrin repeat kinase; Cardiac troponin I-interacting kinase; TNNI3-interacting kinase;)
genome : 74,701,097 - 75,009,730 (308,634)
query : 1 - 2,611 (2,611/2,611)
25 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0004672 : Molecular Function : protein kinase activity
0005515 : Molecular Function : protein binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 16, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023748)
HIX0023748
HIT000251544
(
AY303691
)
(Serine/threonine-protein kinase TNNI3K; EC=2.7.11.1; Cardiac ankyrin repeat kinase; Cardiac troponin I-interacting kinase; TNNI3-interacting kinase;)
genome : 74,701,106 - 75,010,108 (309,003)
query : 1 - 2,980 (2,980/2,980)
25 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0004672 : Molecular Function : protein kinase activity
0005515 : Molecular Function : protein binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 16, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023748)
HIX0023748
HIT000629336 (
ENST00000530184
)
(FPGT-TNNI3K fusion protein isoform b.)
genome : 74,801,811 - 74,811,858 (10,048)
query : 1 - 570 (570/570)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, extr 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023748)
HIX0160336
HIT000513483 (
ENST00000415549
)
(Conserved hypothetical protein.)
genome : 74,807,263 - 74,844,486 (37,224)
query : 1 - 791 (791/791)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto_nucl 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160336)
HIX0023748
HIT000600566 (
ENST00000497284
)
(FPGT-TNNI3K fusion protein isoform b.)
genome : 74,834,704 - 74,835,603 (900)
query : 1 - 682 (682/682)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, extr 11, nucl 3, mito 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023748)
HIX0023748
HIT000625450 (
ENST00000526236
)
(FPGT-TNNI3K fusion protein isoform b.)
genome : 74,834,745 - 74,841,532 (6,788)
query : 1 - 696 (696/696)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 7.5, cyto_nucl 5, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023748)
HIX0023748
HIT000633088 (
ENST00000534020
)
(FPGT-TNNI3K fusion protein isoform b.)
genome : 74,834,905 - 74,905,223 (70,319)
query : 1 - 566 (566/566)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 7.5, cyto_nucl 7.5, mito 5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023748)
HIX0023748
HIT000624714 (
ENST00000525480
)
(FPGT-TNNI3K fusion protein isoform b.)
genome : 74,834,918 - 74,884,027 (49,110)
query : 1 - 507 (507/507)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 9.5, nucl 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023748)
HIX0023748
HIT000046902
(
AK127029
)
(Conserved hypothetical protein.)
genome : 74,880,449 - 74,884,010 (3,562)
query : 1 - 3,548 (3,548/3,548)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023748)
HIX0023748
HIT000352169 (
ENST00000370889
)
(FPGT-TNNI3K fusion protein isoform b.)
genome : 74,904,749 - 74,929,233 (24,485)
query : 1 - 667 (667/667)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 12.5, extr 12, nucl 9.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023748)
HIX0159764
HIT000540810 (
ENST00000442876
)
(Hypothetical short protein.)
genome : 74,933,879 - 74,934,808 (930)
query : 1 - 497 (497/497)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159764)
HIX0159764
HIT000509351 (
ENST00000411417
)
(Hypothetical short protein.)
genome : 74,934,197 - 74,935,227 (1,031)
query : 1 - 445 (445/445)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159764)
HIX0029563
HIT000113907 (
ENST00000294635
)
(Leucine-rich repeat containing protein.)
genome : 74,935,562 - 74,978,298 (42,737)
query : 1 - 3,859 (3,859/3,859)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10, pero 6, extr 5, nucl 5, cysk_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029563)
HIX0029563
HIT000513948 (
ENST00000416014
)
(Leucine-rich repeat containing protein.)
genome : 74,937,776 - 74,949,033 (11,258)
query : 1 - 1,530 (1,530/1,530)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12.5, extr_plas 9, cyto 6, plas 4.5,
cyto_mito 4.5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029563)
HIX0023748
HIT000570169 (
ENST00000465473
)
(FPGT-TNNI3K fusion protein isoform a.)
genome : 75,005,939 - 75,010,112 (4,174)
query : 1 - 656 (656/656)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023748)
HIX0199936
HIT000029144
(
AL834414
)
(Uncharacterized protein C1orf173;)
genome : 75,033,799 - 75,038,682 (4,884)
query : 1 - 4,222 (4,222/4,362)
2 exons
identity = 0.999
3'(1.000;0.997)5'
coverage = 1.000
InterPro :
IPR027962 : Protein of unknown function DUF4590
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 16, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199936)
HIX0199936
HIT000306386
(
CR749349
)
(Uncharacterized protein C1orf173;)
genome : 75,033,801 - 75,045,447 (11,647)
query : 1 - 5,077 (5,077/5,099)
3 exons
identity = 0.999
3'(1.000;0.998;1.000)5'
coverage = 0.999
InterPro :
IPR027962 : Protein of unknown function DUF4590
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 15, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199936)
HIX0199936
HIT000097880
(
BC044605
)
(Hypothetical protein.)
genome : 75,033,795 - 75,036,013 (2,219)
query : 1 - 2,219 (2,219/2,234)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 17.5, cyto_mito 11.5, pero 6, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199936)
HIX0199936
HIT000093701
(
BC035114
)
(Hypothetical protein.)
genome : 75,033,797 - 75,035,783 (1,987)
query : 4 - 1,990 (1,987/2,005)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18.5, cyto_mito 12, pero 6, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199936)
HIX0199936
HIT000315686 (
NM_001002912
)
(Uncharacterized protein C1orf173;)
genome : 75,033,795 - 75,139,422 (105,628)
query : 1 - 7,159 (7,159/7,170)
15 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.983;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14.5, cyto 11.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199936)
HIX0199936
HIT000028162
(
AL833250
)
(Conserved hypothetical protein.)
genome : 75,033,809 - 75,036,920 (3,112)
query : 1 - 2,453 (2,453/2,473)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 17.5, cyto_mito 11.5, pero 6, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199936)
HIX0199936
HIT000124664 (
ENST00000326665
)
(Uncharacterized protein C1orf173;)
genome : 75,033,795 - 75,139,422 (105,628)
query : 1 - 7,159 (7,159/7,159)
15 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.983;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14.5, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199936)
HIX0199936
HIT000531680 (
ENST00000433746
)
(Uncharacterized protein C1orf173;)
genome : 75,033,801 - 75,045,447 (11,647)
query : 1 - 5,076 (5,076/5,076)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 15, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199936)
HIX0199936
HIT000047343
(
AK127470
)
Representative transcript
(Uncharacterized protein C1orf173;)
genome : 75,037,871 - 75,139,422 (101,552)
query : 1 - 3,742 (3,742/3,773)
14 exons
identity = 0.998
3'(0.999;1.000;1.000;0.983;1.000;1.000;1.000;
0.995;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR027962 : Protein of unknown function DUF4590
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 15, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199936)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169082
Mus
sp. (Mouse) : AK076632
Bos
sp. (Cow) : BC126653
Danio
sp. (Zebrafish) : BC133135
Pongo
sp. (Orangutan) : ENSPPYT00000001483
Tetraodon
sp. (Tetraodon) : GSTENT00020217001
Takifugu
sp. (Fugu) : SINFRUT00000144775
Rattus
sp. (Rat) : XM_001080231
Equus
sp. (Horse) : XM_001917962
Gallus
sp. (Chicken) : XM_422545
Pan
sp. (Chimpanzee) : XM_513496
Canis
sp. (Dog) : XM_537111
HIX0029530
HIT000306099
(
CR627203
)
Representative transcript
(Conserved hypothetical protein.)
genome : 75,043,114 - 75,091,782 (48,669)
query : 1 - 4,875 (4,875/4,893)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 10.5, extr 10, cyto_nucl 9.66667, cyto 5.5,
extr_plas 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029530)
HIX0199936
HIT000265140
(
BC073916
)
(Uncharacterized protein C1orf173;)
genome : 75,055,012 - 75,100,538 (45,527)
query : 1 - 2,066 (2,066/2,090)
7 exons
identity = 0.998
3'(1.000;0.983;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR027962 : Protein of unknown function DUF4590
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199936)
HIX0199936
HIT000518595 (
ENST00000420661
)
(Uncharacterized protein C1orf173;)
genome : 75,055,011 - 75,100,539 (45,529)
query : 1 - 2,068 (2,068/2,068)
7 exons
identity = 0.998
3'(1.000;0.983;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199936)
HIX0029530
HIT000513951 (
ENST00000416017
)
(Hypothetical short protein.)
genome : 75,055,419 - 75,087,403 (31,985)
query : 1 - 588 (588/588)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13, extr 10, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029530)
HIX0199936
HIT000583715 (
ENST00000479666
)
(Uncharacterized protein C1orf173;)
genome : 75,078,468 - 75,100,425 (21,958)
query : 1 - 738 (738/738)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 8, mito 7, nucl 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199936)
HIX0023567
HIT000264016
(
BC070058
)
(Quinone oxidoreductase; EC=1.6.5.5; NADPH:quinone reductase; Zeta-crystallin;)
genome : 75,171,173 - 75,198,732 (27,560)
query : 3 - 1,944 (1,942/2,011)
10 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000;1.000;1.000;0.993;
0.992;1.000;1.000)5'
coverage = 0.999
EC number :
EC 1.6.5.5
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002364 : Quinone oxidoreductase/zeta-crystallin, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28.5, cyto_nucl 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023567)
HIX0023567
HIT000057708
(
BX649061
)
(Quinone oxidoreductase isoform b.)
genome : 75,171,172 - 75,174,511 (3,340)
query : 1 - 2,897 (2,897/2,920)
2 exons
identity = 0.995
3'(0.994;0.996)5'
coverage = 0.999
EC number :
EC 1.6.5.5
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 12, extr 9, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023567)
HIX0023567
HIT000198820 (
NM_001889
)
(Alcohol dehydrogenase superfamily, zinc-type protein.)
genome : 75,171,173 - 75,199,092 (27,920)
query : 1 - 2,263 (2,263/2,278)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.6.5.5
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28.5, cyto_nucl 15
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023567)
HIX0023567
HIT000559621 (
NM_001130042
)
(Alcohol dehydrogenase superfamily, zinc-type protein.)
genome : 75,171,173 - 75,199,092 (27,920)
query : 1 - 2,302 (2,302/2,317)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.6.5.5
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28.5, cyto_nucl 15
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023567)
HIX0023567
HIT000559622 (
NM_001130043
)
(Alcohol dehydrogenase superfamily, zinc-type protein.)
genome : 75,171,173 - 75,199,092 (27,920)
query : 1 - 2,161 (2,161/2,176)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.6.5.5
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, cyto_nucl 15.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023567)
HIX0023567
HIT000559979 (
NM_001134759
)
(Alcohol dehydrogenase superfamily, zinc-type protein.)
genome : 75,171,173 - 75,199,092 (27,920)
query : 1 - 1,975 (1,975/1,990)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.6.5.5
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13, golg 4, nucl 2.5, mito 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023567)
HIX0023567
HIT000052210
(
BC039578
)
Representative transcript
(Quinone oxidoreductase; EC=1.6.5.5; NADPH:quinone reductase; Zeta-crystallin;)
genome : 75,171,173 - 75,198,714 (27,542)
query : 1 - 1,885 (1,885/1,900)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.6.5.5
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002364 : Quinone oxidoreductase/zeta-crystallin, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28.5, cyto_nucl 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023567)
HIX0023567
HIT000056530
(
BX647883
)
(Quinone oxidoreductase isoform c.)
genome : 75,171,179 - 75,198,702 (27,524)
query : 2 - 1,580 (1,579/1,598)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 1.6.5.5
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002364 : Quinone oxidoreductase/zeta-crystallin, conserved site
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13, golg 4, nucl 2.5, mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023567)
HIX0023567
HIT000133496 (
ENST00000340866
)
(Alcohol dehydrogenase superfamily, zinc-type protein.)
genome : 75,171,170 - 75,198,714 (27,545)
query : 1 - 1,888 (1,888/1,888)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28.5, cyto_nucl 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023567)
HIX0023567
HIT000352152 (
ENST00000370872
)
(Alcohol dehydrogenase superfamily, zinc-type protein.)
genome : 75,171,170 - 75,198,702 (27,533)
query : 1 - 1,588 (1,588/1,588)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13, golg 4, nucl 2.5, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023567)
HIX0023567
HIT000595599 (
ENST00000492102
)
(Alcohol dehydrogenase superfamily, zinc-type protein.)
genome : 75,171,172 - 75,174,511 (3,340)
query : 1 - 2,899 (2,899/2,899)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 12, extr 9, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023567)
HIX0023567
HIT000515709 (
ENST00000417775
)
(Alcohol dehydrogenase superfamily, zinc-type protein.)
genome : 75,171,174 - 75,199,092 (27,919)
query : 1 - 2,301 (2,301/2,301)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28.5, cyto_nucl 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023567)
HIX0023567
HIT000048667
(
AK128794
)
(Quinone oxidoreductase; EC=1.6.5.5; NADPH:quinone reductase; Zeta-crystallin;)
genome : 75,171,174 - 75,198,694 (27,521)
query : 4 - 1,867 (1,864/1,867)
9 exons
identity = 0.998
3'(0.998;1.000;1.000;0.993;1.000;1.000;1.000;
0.992;1.000)5'
coverage = 0.998
EC number :
EC 1.6.5.5
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002364 : Quinone oxidoreductase/zeta-crystallin, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28.5, cyto_nucl 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023567)
HIX0023567
HIT000043342
(
AK123469
)
(Quinone oxidoreductase isoform b.)
genome : 75,171,174 - 75,173,957 (2,784)
query : 1 - 2,342 (2,342/2,342)
2 exons
identity = 0.998
3'(0.998;0.998)5'
coverage = 1.000
EC number :
EC 1.6.5.5
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 12, extr 9, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023567)
HIX0023567
HIT000330930
(
AK223150
)
(Quinone oxidoreductase; EC=1.6.5.5; NADPH:quinone reductase; Zeta-crystallin;)
genome : 75,171,184 - 75,198,723 (27,540)
query : 2 - 1,884 (1,883/1,884)
9 exons
identity = 0.998
3'(0.999;1.000;1.000;0.993;1.000;1.000;1.000;
0.992;1.000)5'
coverage = 0.999
EC number :
EC 1.6.5.5
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002364 : Quinone oxidoreductase/zeta-crystallin, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28.5, cyto_nucl 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023567)
HIX0023567
HIT000192190
(
L13278
)
(Alcohol dehydrogenase superfamily, zinc-type protein.)
genome : 75,171,184 - 75,190,515 (19,332)
query : 1 - 1,796 (1,796/1,796)
8 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002364 : Quinone oxidoreductase/zeta-crystallin, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28.5, cyto_nucl 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023567)
HIX0023567
HIT000330981
(
AK223201
)
(Quinone oxidoreductase; EC=1.6.5.5; NADPH:quinone reductase; Zeta-crystallin;)
genome : 75,171,200 - 75,198,723 (27,524)
query : 2 - 1,868 (1,867/1,868)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
0.992;1.000)5'
coverage = 0.999
EC number :
EC 1.6.5.5
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002364 : Quinone oxidoreductase/zeta-crystallin, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28.5, cyto_nucl 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023567)
HIX0023567
HIT000352151 (
ENST00000370871
)
(Alcohol dehydrogenase superfamily, zinc-type protein.)
genome : 75,171,656 - 75,198,706 (27,051)
query : 1 - 1,292 (1,292/1,292)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, cyto_nucl 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023567)
HIX0023567
HIT000329649
(
AB209714
)
(Quinone oxidoreductase; EC=1.6.5.5; NADPH:quinone reductase; Zeta-crystallin;)
genome : 75,171,759 - 75,198,724 (26,966)
query : 1 - 1,348 (1,348/1,348)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
0.992;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.6.5.5
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002364 : Quinone oxidoreductase/zeta-crystallin, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28.5, cyto_nucl 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023567)
HIX0023567
HIT000433679
(
AK314813
)
(Quinone oxidoreductase; EC=1.6.5.5; NADPH:quinone reductase; Zeta-crystallin;)
genome : 75,171,980 - 75,198,732 (26,753)
query : 1 - 994 (994/994)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.6.5.5
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002364 : Quinone oxidoreductase/zeta-crystallin, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, cyto_nucl 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023567)
HIX0023567
HIT000352150 (
ENST00000370870
)
(Alcohol dehydrogenase superfamily, zinc-type protein.)
genome : 75,172,789 - 75,198,745 (25,957)
query : 1 - 888 (888/888)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023567)
HIX0023567
HIT000539054 (
ENST00000441120
)
(Alcohol dehydrogenase superfamily, zinc-type protein.)
genome : 75,175,793 - 75,198,495 (22,703)
query : 1 - 677 (677/677)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 16, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023567)
HIX0000701
HIT000562069 (
NM_001162916
)
(tRNA wybutosine-synthesizing protein 3 homolog; EC=2.1.1.-; tRNA-yW-synthesizing protein 3;)
genome : 75,198,836 - 75,232,359 (33,524)
query : 1 - 3,336 (3,336/3,353)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 6, nucl 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000701)
HIX0000701
HIT000555814 (
ENST00000457880
)
(tRNA wybutosine-synthesizing protein 3 homolog; EC=2.1.1.-; tRNA-yW-synthesizing protein 3;)
genome : 75,198,836 - 75,232,358 (33,523)
query : 1 - 3,335 (3,335/3,335)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 6, nucl 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000701)
HIX0000701
HIT000317805 (
NM_138467
)
(tRNA wybutosine-synthesizing protein 3 homolog; EC=2.1.1.-; tRNA-yW-synthesizing protein 3;)
genome : 75,198,840 - 75,232,359 (33,520)
query : 1 - 3,431 (3,431/3,448)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 9.5, cyto 8.5, nucl 7.5,
extr_plas 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000701)
HIX0000701
HIT000352147 (
ENST00000370867
)
(tRNA wybutosine-synthesizing protein 3 homolog; EC=2.1.1.-; tRNA-yW-synthesizing protein 3;)
genome : 75,198,840 - 75,232,358 (33,519)
query : 1 - 3,430 (3,430/3,430)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 9.5, cyto 8.5, nucl 7.5,
extr_plas 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000701)
HIX0000701
HIT000023067
(
AK098237
)
Representative transcript
(tRNA wybutosine-synthesizing protein 3 homolog; EC=2.1.1.-; tRNA-yW-synthesizing protein 3;)
genome : 75,198,840 - 75,231,308 (32,469)
query : 1 - 2,380 (2,380/2,380)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
InterPro :
IPR003827 : tRNA wybutosine-synthesizing protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 9.5, cyto 8.5, nucl 7.5,
extr_plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000701)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK030344
Danio
sp. (Zebrafish) : BC075981
Bos
sp. (Cow) : BT020826
Pongo
sp. (Orangutan) : CR860775
Canis
sp. (Dog) : ENSCAFT00000032489
Monodelphis
sp. (Opossum) : ENSMODT00000024244
Oryzias
sp. (Medaka) : ENSORLT00000005611
Rattus
sp. (Rat) : ENSRNOT00000032874
Tetraodon
sp. (Tetraodon) : GSTENT00005081001
Takifugu
sp. (Fugu) : SINFRUT00000160151
Macaca
sp. (Macaque) : XM_001100269
Pan
sp. (Chimpanzee) : XM_001167649
Equus
sp. (Horse) : XM_001498949
Gallus
sp. (Chicken) : XM_422546
HIX0000701
HIT000264584
(
BC071765
)
(tRNA wybutosine-synthesizing protein 3 homolog; EC=2.1.1.-; tRNA-yW-synthesizing protein 3;)
genome : 75,198,840 - 75,230,912 (32,073)
query : 1 - 1,984 (1,984/2,011)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.993;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
InterPro :
IPR003827 : tRNA wybutosine-synthesizing protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 9.5, cyto 8.5, nucl 7.5,
extr_plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000701)
HIX0000701
HIT000488888
(
AK294264
)
(TRNA wybutosine-synthesizing protein 3 homolog isoform 1.)
genome : 75,198,858 - 75,230,141 (31,284)
query : 1 - 943 (943/943)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
InterPro :
IPR003827 : tRNA wybutosine-synthesizing protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 9, nucl 8.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000701)
HIX0000701
HIT000519673 (
ENST00000421739
)
(TRNA wybutosine-synthesizing protein 3 homolog isoform 1.)
genome : 75,198,858 - 75,230,141 (31,284)
query : 1 - 943 (943/943)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 9, nucl 8.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000701)
HIX0000701
HIT000563694 (
NR_027962
)
(TRNA wybutosine-synthesizing protein 3 homolog isoform 1.)
genome : 75,198,862 - 75,232,359 (33,498)
query : 1 - 3,522 (3,522/3,539)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 10.5, cyto_nucl 8, nucl 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000701)
HIX0000701
HIT000494473
(
AK299849
)
(TRNA wybutosine-synthesizing protein 3 homolog isoform 2.)
genome : 75,198,885 - 75,230,041 (31,157)
query : 1 - 969 (969/969)
5 exons
identity = 0.999
5'(1.000;1.000;0.986;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
InterPro :
IPR003827 : tRNA wybutosine-synthesizing protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 6, nucl 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000701)
HIX0000701
HIT000087298
(
BC009514
)
(TRNA wybutosine-synthesizing protein 3 homolog isoform 1.)
genome : 75,198,906 - 75,229,717 (30,812)
query : 1 - 723 (723/761)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
InterPro :
IPR003827 : tRNA wybutosine-synthesizing protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, nucl 10.5, cyto 10.5, extr 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000701)
HIX0000701
HIT000430138
(
AK311272
)
(TRNA wybutosine-synthesizing protein 3 homolog isoform 1.)
genome : 75,198,916 - 75,230,244 (31,329)
query : 1 - 1,353 (1,353/1,353)
6 exons
identity = 0.998
5'(0.993;1.000;1.000;0.986;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
InterPro :
IPR003827 : tRNA wybutosine-synthesizing protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15, nucl 6.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000701)
HIX0000701
HIT000583192 (
ENST00000479111
)
(TRNA wybutosine-synthesizing protein 3 homolog isoform 1.)
genome : 75,198,931 - 75,230,084 (31,154)
query : 1 - 1,130 (1,130/1,130)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 11.5, mito 6, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000701)
HIX0000701
HIT000587857 (
ENST00000483990
)
(TRNA wybutosine-synthesizing protein 3 homolog isoform 1.)
genome : 75,201,873 - 75,218,078 (16,206)
query : 1 - 708 (708/708)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, extr 11, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000701)
HIX0000701
HIT000589206 (
ENST00000485401
)
(TRNA wybutosine-synthesizing protein 3 homolog isoform 2.)
genome : 75,214,325 - 75,229,673 (15,349)
query : 1 - 513 (513/513)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 14.5, nucl 7, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000701)
HIX0000701
HIT000547630 (
ENST00000449696
)
(Conserved hypothetical protein.)
genome : 75,215,807 - 75,218,059 (2,253)
query : 1 - 633 (633/633)
3 exons
identity = 0.989
5'(1.000;0.983;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000701)
HIX0000701
HIT000590219 (
ENST00000486467
)
(TRNA wybutosine-synthesizing protein 3 homolog isoform 2.)
genome : 75,216,818 - 75,229,685 (12,868)
query : 1 - 551 (551/551)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, nucl 7, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000701)
HIX0000701
HIT000056238
(
BX647591
)
(TRNA wybutosine-synthesizing protein 3 homolog isoform 2.)
genome : 75,218,014 - 75,232,358 (14,345)
query : 1 - 2,877 (2,877/2,903)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 0.999
EC number :
EC 2.1.1.-
InterPro :
IPR003827 : tRNA wybutosine-synthesizing protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 7.5, cyto_nucl 7, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000701)
HIX0000701
HIT000092607
(
BC032341
)
(TRNA wybutosine-synthesizing protein 3 homolog isoform 2.)
genome : 75,229,577 - 75,232,359 (2,783)
query : 1 - 650 (650/680)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 6, nucl 3, cyto_pero 3, cyto_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000701)
HIX0000701
HIT000572248 (
ENST00000467646
)
(TRNA wybutosine-synthesizing protein 3 homolog isoform 2.)
genome : 75,229,577 - 75,232,362 (2,786)
query : 1 - 653 (653/653)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 6, nucl 3, cyto_pero 3, cyto_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000701)
HIX0160999
HIT000536553 (
ENST00000438619
)
(Non-protein coding transcript.)
genome : 75,428,998 - 75,430,802 (1,805)
query : 1 - 339 (339/339)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160999)
HIX0029260
HIT000094530
(
BC036630
)
Representative transcript
(Hypothetical short protein.)
genome : 75,588,203 - 75,589,612 (1,410)
query : 1 - 1,412 (1,412/1,427)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 13, extr 4, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029260)
HIX0029260
HIT000678797 (
ENST00000565735
)
(Hypothetical short protein.)
genome : 75,588,203 - 75,589,612 (1,410)
query : 1 - 1,410 (1,410/1,410)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 13, extr 4, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029260)
HIX0029220
HIT000092370
(
BC031326
)
Representative transcript
(Hypothetical short protein.)
genome : 75,593,515 - 75,598,743 (5,229)
query : 3 - 672 (670/687)
2 exons
identity = 0.999
3'(0.998;1.000)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029220)
HIX0029220
HIT000544172 (
ENST00000446238
)
(Hypothetical short protein.)
genome : 75,593,515 - 75,598,743 (5,229)
query : 1 - 670 (670/670)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029220)
HIX0028747
HIT000096123
(
BC040321
)
Representative transcript
(LIM/homeobox protein Lhx8 isoform 2.)
genome : 75,594,119 - 75,627,217 (33,099)
query : 1 - 2,372 (2,372/2,411)
10 exons
identity = 0.999
5'(0.994;0.998;1.000;1.000;1.000;1.000;1.000;
1.000;0.995;1.000)3'
coverage = 1.000
InterPro :
IPR001781 : Zinc finger, LIM-type
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028747)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK160121
Oryzias
sp. (Medaka) : AY534646
Danio
sp. (Zebrafish) : AY664404
Rattus
sp. (Rat) : BC090011
Gallus
sp. (Chicken) : DQ082893
Equus
sp. (Horse) : ENSECAT00000005728
Monodelphis
sp. (Opossum) : ENSMODT00000024246
Oryzias
sp. (Medaka) : ENSORLT00000016493
Pongo
sp. (Orangutan) : ENSPPYT00000001479
Tetraodon
sp. (Tetraodon) : GSTENT00020218001
Takifugu
sp. (Fugu) : SINFRUT00000144779
Takifugu
sp. (Fugu) : SINFRUT00000160654
Macaca
sp. (Macaque) : XM_001097664
Pan
sp. (Chimpanzee) : XM_524738
Canis
sp. (Dog) : XM_547330
Bos
sp. (Cow) : XM_589896
HIX0028747
HIT000315556 (
NM_001001933
)
(LIM/homeobox protein Lhx8 isoform 1.)
genome : 75,594,119 - 75,627,217 (33,099)
query : 1 - 2,372 (2,372/2,393)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028747)
HIX0028747
HIT000113909 (
ENST00000294638
)
(LIM/homeobox protein Lhx8 isoform 1.)
genome : 75,594,119 - 75,627,218 (33,100)
query : 1 - 2,373 (2,373/2,373)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028747)
HIX0203378
HIT000012245
(
AK055631
)
Representative transcript
(Hypothetical short protein.)
genome : 75,595,659 - 75,598,261 (2,603)
query : 2 - 2,204 (2,203/2,204)
2 exons
identity = 0.999
3'(0.999;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 10, cyto_nucl 9.5, cyto 7, extr_plas 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203378)
HIX0203378
HIT000525826 (
ENST00000427892
)
(Hypothetical short protein.)
genome : 75,595,659 - 75,598,261 (2,603)
query : 1 - 2,203 (2,203/2,203)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 10, cyto_nucl 9.5, cyto 7, extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203378)
HIX0028747
HIT000094400
(
BC036423
)
(LIM/homeobox protein Lhx6 isoform 5.)
genome : 75,600,567 - 75,627,217 (26,651)
query : 7 - 1,767 (1,761/1,781)
9 exons
identity = 0.994
5'(1.000;1.000;0.969;0.992;0.995;1.000;1.000;
1.000;0.994)3'
coverage = 0.997
InterPro :
IPR001781 : Zinc finger, LIM-type
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028747)
HIX0028747
HIT000723509 (
NM_001256114
)
(LIM/homeobox protein Lhx8 isoform 2.)
genome : 75,600,567 - 75,627,217 (26,651)
query : 1 - 1,763 (1,763/1,784)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028747)
HIX0028747
HIT000310284 (
ENST00000356261
)
(LIM/homeobox protein Lhx8 isoform 2.)
genome : 75,600,567 - 75,627,218 (26,652)
query : 1 - 1,764 (1,764/1,764)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028747)
HIX0028747
HIT000672678 (
ENST00000559413
)
(LIM/homeobox protein Lhx6; LIM homeobox protein 6; LIM/homeobox protein Lhx6.1;)
genome : 75,602,576 - 75,606,791 (4,216)
query : 1 - 314 (314/314)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028747)
HIX0028747
HIT000019522
(
AK094667
)
(LIM/homeobox protein Lhx8 isoform 2.)
genome : 75,624,217 - 75,627,216 (3,000)
query : 1 - 3,000 (3,000/3,000)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 6.5, cyto_nucl 6, cyto 4.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028747)
HIX0000703
HIT000352139 (
ENST00000370859
)
(Choline transporter-like protein 5 isoform B.)
genome : 75,667,816 - 76,076,801 (408,986)
query : 1 - 3,896 (3,896/3,896)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000703)
HIX0000703
HIT000559634 (
NM_001130058
)
(Choline transporter-like protein 5 isoform B.)
genome : 75,667,816 - 76,076,799 (408,984)
query : 1 - 3,894 (3,894/3,894)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000703)
HIX0000703
HIT000047936
(
AK128063
)
(Choline transporter-like family protein.)
genome : 75,667,816 - 76,076,763 (408,948)
query : 1 - 3,947 (3,947/3,947)
25 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;0.990;1.000;
0.996;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;0.976;1.000;0.973;1.000)5'
coverage = 1.000
InterPro :
IPR007603 : Choline transporter-like
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000703)
HIX0000703
HIT000093483
(
BC034580
)
Representative transcript
(Choline transporter-like protein 2; Inner ear supporting cell antigen; IESCA; Solute carrier family 44 member 2;)
genome : 75,669,197 - 76,076,778 (407,582)
query : 3 - 2,652 (2,650/2,669)
26 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.988;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR007603 : Choline transporter-like
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000703)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB070066
Mus
sp. (Mouse) : BC086641
Tetraodon
sp. (Tetraodon) : CR697723
Bos
sp. (Cow) : ENSBTAT00000033467
Canis
sp. (Dog) : ENSCAFT00000032485
Equus
sp. (Horse) : ENSECAT00000024059
Monodelphis
sp. (Opossum) : ENSMODT00000039799
Oryzias
sp. (Medaka) : ENSORLT00000005022
Pongo
sp. (Orangutan) : ENSPPYT00000001478
Takifugu
sp. (Fugu) : SINFRUT00000172709
Pan
sp. (Chimpanzee) : XM_001167781
Gallus
sp. (Chicken) : XM_426673
Danio
sp. (Zebrafish) : XM_681327
HIX0000703
HIT000099389
(
BC051740
)
(Choline transporter-like protein 2; Inner ear supporting cell antigen; IESCA; Solute carrier family 44 member 2;)
genome : 75,669,197 - 76,076,778 (407,582)
query : 3 - 2,652 (2,650/2,669)
26 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.988;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR007603 : Choline transporter-like
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000703)
HIX0000703
HIT000491548
(
AK296924
)
(Choline transporter-like protein 5 isoform B.)
genome : 75,669,298 - 76,143,610 (474,313)
query : 1 - 2,451 (2,451/2,451)
23 exons
identity = 0.998
3'(0.991;1.000;1.000;1.000;1.000;0.990;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.988;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007603 : Choline transporter-like
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000703)
HIX0000703
HIT000018037
(
AK093170
)
(Choline transporter-like protein 5 isoform B.)
genome : 75,669,298 - 76,076,801 (407,504)
query : 1 - 2,414 (2,414/2,414)
24 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.990;1.000;
0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.988;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007603 : Choline transporter-like
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000703)
HIX0000703
HIT000352135 (
ENST00000370855
)
(Choline transporter-like protein 5; Solute carrier family 44 member 5;)
genome : 75,670,160 - 76,076,769 (406,610)
query : 1 - 4,406 (4,406/4,406)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000703)
HIX0000703
HIT000016267
(
AK091400
)
(Choline transporter-like protein 5 isoform A.)
genome : 75,670,160 - 75,693,479 (23,320)
query : 1 - 3,376 (3,376/3,376)
12 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;0.990;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007603 : Choline transporter-like
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000703)
HIX0000703
HIT000494197
(
AK299573
)
(Choline transporter-like protein 5 isoform A.)
genome : 75,671,817 - 76,081,694 (409,878)
query : 1 - 2,740 (2,740/2,740)
22 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000;1.000;0.990;0.989;
1.000;1.000;1.000;1.000;0.992;0.991;0.988;
0.992;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007603 : Choline transporter-like
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000703)
HIX0000703
HIT000491565
(
AK296941
)
(Choline transporter-like protein 5 isoform A.)
genome : 75,671,953 - 76,143,516 (471,564)
query : 1 - 2,503 (2,503/2,503)
22 exons
identity = 0.997
3'(0.996;0.988;1.000;1.000;1.000;0.990;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.988;1.000)5'
coverage = 1.000
InterPro :
IPR007603 : Choline transporter-like
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000703)
HIX0000703
HIT000634656 (
ENST00000535611
)
(Choline transporter-like protein 5 isoform A.)
genome : 75,671,953 - 75,862,321 (190,369)
query : 1 - 2,416 (2,416/2,416)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000703)
HIX0000703
HIT000213950 (
NM_152697
)
(Choline transporter-like protein 5; Solute carrier family 44 member 5;)
genome : 75,672,075 - 76,076,799 (404,725)
query : 1 - 2,521 (2,521/2,521)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000703)
HIX0000703
HIT000040638
(
BC028743
)
(Choline transporter-like protein 5; Solute carrier family 44 member 5;)
genome : 75,672,282 - 76,076,769 (404,488)
query : 4 - 2,287 (2,284/2,302)
24 exons
identity = 0.999
3'(1.000;1.000;0.989;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.991;0.988;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR007603 : Choline transporter-like
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000703)
HIX0000703
HIT000574044 (
ENST00000469525
)
(Conserved hypothetical protein.)
genome : 75,708,605 - 76,076,781 (368,177)
query : 1 - 721 (721/721)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000703)
HIX0214412
HIT000485877 (
NM_001112808
)
(Ankyrin repeat-containing domain containing protein.)
genome : 74,663,896 - 75,010,116 (346,221)
query : 1 - 3,328 (3,328/3,328)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 10.5, mito 10, nucl 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214412)
HIX0214412
HIT000656528 (
NM_001199327
)
(Ankyrin repeat-containing domain containing protein.)
genome : 74,663,896 - 74,930,609 (266,714)
query : 1 - 2,782 (2,782/2,799)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 9, nucl 7, E.R._mito 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214412)
HIX0214412
HIT000055449
(
BX640903
)
(Fucose-1-phosphate guanylyltransferase isoform 2.)
genome : 74,663,949 - 74,841,531 (177,583)
query : 39 - 7,574 (7,536/7,607)
19 exons
identity = 0.997
5'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.986;1.000;1.000;0.987;1.000;
1.000;1.000;1.000;1.000;0.997)3'
coverage = 0.995
EC number :
EC 2.7.7.30
KEGG pathway :
00051 : Fructose and mannose metabolism (61)
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0004672 : Molecular Function : protein kinase activity
0005515 : Molecular Function : protein binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 16.5, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214412)
HIX0214412
HIT000333954
(
BC032865
)
(Fucose-1-phosphate guanylyltransferase isoform 2.)
genome : 74,663,928 - 74,930,606 (266,679)
query : 6 - 2,752 (2,747/2,767)
24 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000;0.991;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;1.000)3'
coverage = 0.998
EC number :
EC 2.7.7.30
KEGG pathway :
00051 : Fructose and mannose metabolism (61)
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0004672 : Molecular Function : protein kinase activity
0005515 : Molecular Function : protein binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16.5, nucl 7, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214412)
HIX0214412
HIT000352179 (
ENST00000370899
)
(Ankyrin repeat-containing domain containing protein.)
genome : 74,663,926 - 74,930,609 (266,684)
query : 1 - 2,752 (2,752/2,752)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15.5, nucl 7, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214412)
HIX0214412
HIT000352175 (
ENST00000370895
)
(Ankyrin repeat-containing domain containing protein.)
genome : 74,663,928 - 74,841,532 (177,605)
query : 1 - 7,566 (7,566/7,566)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 16, nucl 7.5, extr 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214412)
HIX0214412
HIT000633682 (
ENST00000534632
)
(Conserved hypothetical protein.)
genome : 74,663,933 - 74,833,648 (169,716)
query : 1 - 517 (517/517)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12, nucl 6.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214412)
HIX0214412
HIT000632093 (
ENST00000533006
)
(Conserved hypothetical protein.)
genome : 74,663,937 - 74,715,202 (51,266)
query : 1 - 566 (566/566)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 12, extr 6, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214412)
HIX0214412
HIT000328876
(
AB208941
)
Representative transcript
(FPGT-TNNI3K fusion protein isoform a.)
genome : 74,663,947 - 75,010,108 (346,162)
query : 1 - 3,269 (3,269/3,269)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0004672 : Molecular Function : protein kinase activity
0005515 : Molecular Function : protein binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15.5, nucl 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214412)
HIX0214412
HIT000352171 (
ENST00000370891
)
(Ankyrin repeat-containing domain containing protein.)
genome : 74,663,947 - 75,010,108 (346,162)
query : 1 - 3,269 (3,269/3,269)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15.5, nucl 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214412)
HIX0214412
HIT000352173 (
ENST00000370893
)
(Conserved hypothetical protein.)
genome : 74,663,948 - 74,706,367 (42,420)
query : 1 - 1,195 (1,195/1,195)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.5, extr 6, mito 4, nucl 3,
extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214412)
HIX0214412
HIT000670583 (
ENST00000557284
)
(Ankyrin repeat-containing domain containing protein.)
genome : 74,663,963 - 75,009,666 (345,704)
query : 1 - 2,811 (2,811/2,811)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15.5, nucl 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214412)
AL591463.7
74200001-74298853 F +
NCBI
AL359200.13
74298854-74362792 F +
NCBI
AC090530.3
74362793-74464967 F +
NCBI
AL359205.15
74464968-74634401 F +
NCBI
AC098692.3
74634402-74702320 F +
NCBI
AC119672.1
74702321-74730516 F +
NCBI
AC093158.2
74730517-74859511 F +
NCBI
AC105271.2
74859512-74971869 F +
NCBI
BX470253.2
74971870-75045361 F +
NCBI
AC096950.2
75045362-75161225 F +
NCBI
AC135803.2
75161226-75184150 F +
NCBI
AC091611.5
75184151-75382636 F +
NCBI
AC133865.2
75382637-75456884 F +
NCBI
AC099786.2
75456885-75638327 F +
NCBI
AC118550.2
75638328-75680330 F +
NCBI
AC107627.3
75680331-75766343 F +
NCBI
AC118990.2
75766344-75800000 F +
NCBI