bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0001643
HIT000084773
(
AY150218
)
(Golgi resident protein GCP60; Acyl-CoA-binding domain-containing protein 3; Golgi complex-associated protein 1; GOCAP1; Golgi phosphoprotein 1; GOLPH1; PBR- and PKA-associated protein 7; Peripheral benzodiazepine receptor-associated protein PAP7;)
genome : 226,332,383 - 226,374,402 (42,020)
query : 1 - 3,539 (3,539/3,572)
8 exons
identity = 0.993
3'(0.992;0.990;0.995;0.994;0.987;0.993;1.000;
0.997)5'
coverage = 0.999
InterPro :
IPR000582 : Acyl-CoA-binding protein, ACBP
IPR009038 : GOLD
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR022408 : Acyl-CoA-binding protein, ACBP, conserved site
GO :
0000062 : Molecular Function : fatty-acyl-CoA binding
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001643)
HIX0001643
HIT000093469
(
BC034563
)
(Golgi resident protein GCP60; Acyl-CoA-binding domain-containing protein 3; Golgi complex-associated protein 1; GOCAP1; Golgi phosphoprotein 1; GOLPH1; PBR- and PKA-associated protein 7; Peripheral benzodiazepine receptor-associated protein PAP7;)
genome : 226,332,381 - 226,352,554 (20,174)
query : 1 - 3,014 (3,014/3,037)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009038 : GOLD
GO :
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 18, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001643)
HIX0001643
HIT000059351
(
AB043587
)
Representative transcript
(Golgi resident protein GCP60; Acyl-CoA-binding domain-containing protein 3; Golgi complex-associated protein 1; GOCAP1; Golgi phosphoprotein 1; GOLPH1; PBR- and PKA-associated protein 7; Peripheral benzodiazepine receptor-associated protein PAP7;)
genome : 226,332,381 - 226,374,431 (42,051)
query : 1 - 3,581 (3,581/3,598)
8 exons
identity = 0.994
3'(0.991;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)5'
coverage = 1.000
InterPro :
IPR000582 : Acyl-CoA-binding protein, ACBP
IPR009038 : GOLD
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR022408 : Acyl-CoA-binding protein, ACBP, conserved site
GO :
0000062 : Molecular Function : fatty-acyl-CoA binding
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001643)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720620
Mus
sp. (Mouse) : AK030371
Rattus
sp. (Rat) : AY336075
Danio
sp. (Zebrafish) : BC054676
Danio
sp. (Zebrafish) : BC134170
Oryzias
sp. (Medaka) : ENSORLT00000017278
Tetraodon
sp. (Tetraodon) : GSTENT00030383001
Takifugu
sp. (Fugu) : SINFRUT00000144740
Macaca
sp. (Macaque) : XM_001091471
Pan
sp. (Chimpanzee) : XM_001140558
Monodelphis
sp. (Opossum) : XM_001368230
Equus
sp. (Horse) : XM_001491159
Canis
sp. (Dog) : XM_849612
HIX0001643
HIT000208821 (
NM_022735
)
(Golgi resident protein GCP60; Acyl-CoA-binding domain-containing protein 3; Golgi complex-associated protein 1; GOCAP1; Golgi phosphoprotein 1; GOLPH1; PBR- and PKA-associated protein 7; Peripheral benzodiazepine receptor-associated protein PAP7;)
genome : 226,332,381 - 226,374,423 (42,043)
query : 1 - 3,564 (3,564/3,581)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001643)
HIX0001643
HIT000098026_03
(
BC045533
)
(Golgi resident protein GCP60; Acyl-CoA-binding domain-containing protein 3; Golgi complex-associated protein 1; GOCAP1; Golgi phosphoprotein 1; GOLPH1; PBR- and PKA-associated protein 7; Peripheral benzodiazepine receptor-associated protein PAP7;)
genome : 226,332,382 - 226,374,409 (42,028)
query : 1 - 3,544 (3,544/3,560)
8 exons
identity = 0.997
3'(0.997;1.000;0.995;1.000;1.000;1.000;1.000;
0.994)5'
coverage = 0.999
InterPro :
IPR000582 : Acyl-CoA-binding protein, ACBP
IPR009038 : GOLD
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR022408 : Acyl-CoA-binding protein, ACBP, conserved site
GO :
0000062 : Molecular Function : fatty-acyl-CoA binding
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001643)
HIX0001643
HIT000348092 (
ENST00000366812
)
(Golgi resident protein GCP60; Acyl-CoA-binding domain-containing protein 3; Golgi complex-associated protein 1; GOCAP1; Golgi phosphoprotein 1; GOLPH1; PBR- and PKA-associated protein 7; Peripheral benzodiazepine receptor-associated protein PAP7;)
genome : 226,332,380 - 226,374,431 (42,052)
query : 1 - 3,573 (3,573/3,573)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001643)
HIX0001643
HIT000260094
(
BC060792
)
(Golgi resident protein GCP60; Acyl-CoA-binding domain-containing protein 3; Golgi complex-associated protein 1; GOCAP1; Golgi phosphoprotein 1; GOLPH1; PBR- and PKA-associated protein 7; Peripheral benzodiazepine receptor-associated protein PAP7;)
genome : 226,332,638 - 226,374,419 (41,782)
query : 1 - 3,300 (3,300/3,358)
8 exons
identity = 0.997
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000582 : Acyl-CoA-binding protein, ACBP
IPR009038 : GOLD
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR022408 : Acyl-CoA-binding protein, ACBP, conserved site
GO :
0000062 : Molecular Function : fatty-acyl-CoA binding
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001643)
HIX0001643
HIT000062547
(
AF020762
)
(Conserved hypothetical protein.)
genome : 226,332,646 - 226,333,946 (1,301)
query : 18 - 1,319 (1,302/1,319)
1 exon
identity = 0.985
3'(0.985)5'
coverage = 0.987
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26.5, extr_plas 15, extr 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001643)
HIX0001643
HIT000008794
(
AK025520
)
(Golgi resident protein GCP60; Acyl-CoA-binding domain-containing protein 3; Golgi complex-associated protein 1; GOCAP1; Golgi phosphoprotein 1; GOLPH1; PBR- and PKA-associated protein 7; Peripheral benzodiazepine receptor-associated protein PAP7;)
genome : 226,333,824 - 226,374,424 (40,601)
query : 1 - 2,122 (2,122/2,140)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.993;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000582 : Acyl-CoA-binding protein, ACBP
IPR009038 : GOLD
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR022408 : Acyl-CoA-binding protein, ACBP, conserved site
GO :
0000062 : Molecular Function : fatty-acyl-CoA binding
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001643)
HIX0001643
HIT000013732
(
AK057118
)
(Golgi resident protein GCP60; Acyl-CoA-binding domain-containing protein 3; Golgi complex-associated protein 1; GOCAP1; Golgi phosphoprotein 1; GOLPH1; PBR- and PKA-associated protein 7; Peripheral benzodiazepine receptor-associated protein PAP7;)
genome : 226,333,825 - 226,336,059 (2,235)
query : 1 - 2,235 (2,235/2,235)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
InterPro :
IPR009038 : GOLD
GO :
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 10, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001643)
HIX0001643
HIT000095824
(
BC039575
)
(Golgi resident protein GCP60; Acyl-CoA-binding domain-containing protein 3; Golgi complex-associated protein 1; GOCAP1; Golgi phosphoprotein 1; GOLPH1; PBR- and PKA-associated protein 7; Peripheral benzodiazepine receptor-associated protein PAP7;)
genome : 226,333,994 - 226,374,401 (40,408)
query : 1 - 1,930 (1,930/1,995)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.993;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000582 : Acyl-CoA-binding protein, ACBP
IPR009038 : GOLD
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR022408 : Acyl-CoA-binding protein, ACBP, conserved site
GO :
0000062 : Molecular Function : fatty-acyl-CoA binding
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001643)
HIX0001643
HIT000433334
(
AK314468
)
(Golgi resident protein GCP60; Acyl-CoA-binding domain-containing protein 3; Golgi complex-associated protein 1; GOCAP1; Golgi phosphoprotein 1; GOLPH1; PBR- and PKA-associated protein 7; Peripheral benzodiazepine receptor-associated protein PAP7;)
genome : 226,334,311 - 226,374,424 (40,114)
query : 1 - 1,635 (1,635/1,635)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000582 : Acyl-CoA-binding protein, ACBP
IPR009038 : GOLD
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR022408 : Acyl-CoA-binding protein, ACBP, conserved site
GO :
0000062 : Molecular Function : fatty-acyl-CoA binding
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001643)
HIX0159664
HIT000538474 (
ENST00000440540
)
(Conserved hypothetical protein.)
genome : 226,335,704 - 226,342,772 (7,069)
query : 1 - 535 (535/535)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 12, extr_plas 10.5, extr 7, mito 6, nucl 2,
E.R. 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159664)
HIX0001643
HIT000569646 (
ENST00000464927
)
(Golgi resident protein GCP60; Acyl-CoA-binding domain-containing protein 3; Golgi complex-associated protein 1; GOCAP1; Golgi phosphoprotein 1; GOLPH1; PBR- and PKA-associated protein 7; Peripheral benzodiazepine receptor-associated protein PAP7;)
genome : 226,342,343 - 226,349,333 (6,991)
query : 1 - 294 (294/294)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 13.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001643)
HIX0029234
HIT000093057
(
BC033346
)
Representative transcript
(60S ribosomal protein L34;)
genome : 226,374,533 - 226,385,086 (10,554)
query : 1 - 633 (633/649)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029234)
HIX0160754
HIT000527801 (
ENST00000429867
)
(Conserved hypothetical protein.)
genome : 226,376,571 - 226,376,922 (352)
query : 1 - 352 (352/352)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13, nucl 9, cyto_nucl 7, plas 5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160754)
HIX0023586
pHIT000072612 ( pHIT000072612 )
(Protein lin-9 homolog; HuLin-9; hLin-9; Beta subunit-associated regulator of apoptosis; TUDOR gene similar protein; Type I interferon receptor beta chain-associated protein; pRB-associated protein;)
genome : 226,408,083 - 226,497,576 (89,494)
query : 1 - 1,971 (1,971/1,971)
16 exons
InterPro :
IPR010561 : Protein LIN-9/Protein ALWAYS EARLY
GO :
0006351 : Biological Process : transcription, DNA-templated
0007049 : Biological Process : cell cycle
0017053 : Cellular Component : transcriptional repressor complex
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023586)
CAGE tag :
H21BA99B0601
HIX0028575
HIT000340103
(
BC111974
)
Representative transcript
(Homeobox protein MIXL1; Homeodomain protein MIX; hMix; MIX1 homeobox-like protein 1; Mix.1 homeobox-like protein;)
genome : 226,411,319 - 226,413,566 (2,248)
query : 1 - 816 (816/816)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028575)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF154573
Bos
sp. (Cow) : ENSBTAT00000047295
Oryzias
sp. (Medaka) : ENSORLT00000021759
Pongo
sp. (Orangutan) : ENSPPYT00000000178
Tetraodon
sp. (Tetraodon) : GSTENT00013398001
Rattus
sp. (Rat) : XM_001061956
Macaca
sp. (Macaque) : XM_001091234
Pan
sp. (Chimpanzee) : XM_001140733
Monodelphis
sp. (Opossum) : XM_001376893
Equus
sp. (Horse) : XM_001491266
HIX0028575
HIT000386894
(
BC113441
)
(Homeobox protein MIXL1; Homeodomain protein MIX; hMix; MIX1 homeobox-like protein 1; Mix.1 homeobox-like protein;)
genome : 226,411,319 - 226,413,565 (2,247)
query : 1 - 815 (815/815)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028575)
HIX0028575
HIT000502226
(
BC143784
)
(Homeobox protein MIXL1; Homeodomain protein MIX; hMix; MIX1 homeobox-like protein 1; Mix.1 homeobox-like protein;)
genome : 226,411,319 - 226,413,565 (2,247)
query : 1 - 839 (839/839)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 17, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028575)
HIX0028575
HIT000641079 (
ENST00000542034
)
(Homeobox protein MIXL1; Homeodomain protein MIX; hMix; MIX1 homeobox-like protein 1; Mix.1 homeobox-like protein;)
genome : 226,411,319 - 226,413,565 (2,247)
query : 1 - 839 (839/839)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 17, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028575)
HIX0028575
HIT000348090 (
ENST00000366810
)
(Homeobox protein MIXL1; Homeodomain protein MIX; hMix; MIX1 homeobox-like protein 1; Mix.1 homeobox-like protein;)
genome : 226,411,383 - 226,414,785 (3,403)
query : 1 - 1,971 (1,971/1,971)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028575)
HIX0028575
HIT000074030
(
AF211891
)
(Homeobox protein MIXL1; Homeodomain protein MIX; hMix; MIX1 homeobox-like protein 1; Mix.1 homeobox-like protein;)
genome : 226,411,383 - 226,413,513 (2,131)
query : 1 - 699 (699/699)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028575)
HIX0028575
HIT000210301 (
NM_031944
)
(Homeobox protein MIXL1; Homeodomain protein MIX; hMix; MIX1 homeobox-like protein 1; Mix.1 homeobox-like protein;)
genome : 226,411,383 - 226,413,513 (2,131)
query : 1 - 699 (699/699)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028575)
HIX0028575
HIT000671029 (
ENST00000557734
)
(Homeobox protein MIXL1; Homeodomain protein MIX; hMix; MIX1 homeobox-like protein 1; Mix.1 homeobox-like protein;)
genome : 226,413,204 - 226,414,090 (887)
query : 1 - 784 (784/784)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028575)
HIX0023586
HIT000097693
(
BC043444
)
(Protein lin-9 homolog; HuLin-9; hLin-9; Beta subunit-associated regulator of apoptosis; TUDOR gene similar protein; Type I interferon receptor beta chain-associated protein; pRB-associated protein;)
genome : 226,418,858 - 226,496,843 (77,986)
query : 1 - 2,976 (2,976/3,044)
15 exons
identity = 0.999
3'(0.998;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR010561 : Protein LIN-9/Protein ALWAYS EARLY
GO :
0006351 : Biological Process : transcription, DNA-templated
0007049 : Biological Process : cell cycle
0017053 : Cellular Component : transcriptional repressor complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023586)
HIX0023586
HIT000054653
(
BX537869
)
(Protein lin-9 homolog; HuLin-9; hLin-9; Beta subunit-associated regulator of apoptosis; TUDOR gene similar protein; Type I interferon receptor beta chain-associated protein; pRB-associated protein;)
genome : 226,418,864 - 226,496,864 (78,001)
query : 1 - 2,991 (2,991/3,020)
15 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR010561 : Protein LIN-9/Protein ALWAYS EARLY
GO :
0006351 : Biological Process : transcription, DNA-templated
0007049 : Biological Process : cell cycle
0017053 : Cellular Component : transcriptional repressor complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023586)
HIX0023586
HIT000045563
(
AK125690
)
(Conserved hypothetical protein.)
genome : 226,418,864 - 226,465,526 (46,663)
query : 1 - 2,336 (2,336/2,358)
9 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, extr 13, cyto 10, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023586)
HIX0023586
HIT000261864
(
BC065302
)
Representative transcript
(Protein lin-9 homolog; HuLin-9; hLin-9; Beta subunit-associated regulator of apoptosis; TUDOR gene similar protein; Type I interferon receptor beta chain-associated protein; pRB-associated protein;)
genome : 226,418,858 - 226,497,434 (78,577)
query : 2 - 3,051 (3,050/3,066)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR010561 : Protein LIN-9/Protein ALWAYS EARLY
GO :
0006351 : Biological Process : transcription, DNA-templated
0007049 : Biological Process : cell cycle
0017053 : Cellular Component : transcriptional repressor complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, mito 8, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023586)
HIX0023586
HIT000098082
(
BC045625
)
(Protein lin-9 homolog; HuLin-9; hLin-9; Beta subunit-associated regulator of apoptosis; TUDOR gene similar protein; Type I interferon receptor beta chain-associated protein; pRB-associated protein;)
genome : 226,418,864 - 226,497,198 (78,335)
query : 1 - 3,325 (3,325/3,340)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR010561 : Protein LIN-9/Protein ALWAYS EARLY
GO :
0006351 : Biological Process : transcription, DNA-templated
0007049 : Biological Process : cell cycle
0017053 : Cellular Component : transcriptional repressor complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, mito 7, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023586)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168419
Gallus
sp. (Chicken) : AJ719426
Mus
sp. (Mouse) : AK089989
Danio
sp. (Zebrafish) : BC124703
Oryzias
sp. (Medaka) : ENSORLT00000017238
Pongo
sp. (Orangutan) : ENSPPYT00000000177
Tetraodon
sp. (Tetraodon) : GSTENT00030381001
Takifugu
sp. (Fugu) : SINFRUT00000144725
Rattus
sp. (Rat) : XM_001067807
Danio
sp. (Zebrafish) : XM_001332951
Monodelphis
sp. (Opossum) : XM_001376905
Equus
sp. (Horse) : XM_001491325
Pan
sp. (Chimpanzee) : XM_525073
Canis
sp. (Dog) : XM_849606
Bos
sp. (Cow) : XR_028331
HIX0023586
HIT000724682 (
NM_001270410
)
(Protein lin-9 homolog; HuLin-9; hLin-9; Beta subunit-associated regulator of apoptosis; TUDOR gene similar protein; Type I interferon receptor beta chain-associated protein; pRB-associated protein;)
genome : 226,418,850 - 226,497,449 (78,600)
query : 1 - 3,073 (3,073/3,073)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, mito 8, cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023586)
HIX0023586
HIT000214781 (
NM_173083
)
(Protein lin-9 homolog; HuLin-9; hLin-9; Beta subunit-associated regulator of apoptosis; TUDOR gene similar protein; Type I interferon receptor beta chain-associated protein; pRB-associated protein;)
genome : 226,418,850 - 226,497,204 (78,355)
query : 1 - 3,345 (3,345/3,345)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, mito 7, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023586)
HIX0023586
HIT000724681 (
NM_001270409
)
(Protein lin-9 homolog isoform 2.)
genome : 226,418,850 - 226,497,204 (78,355)
query : 1 - 3,240 (3,240/3,240)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 12.5, mito 7, cyto 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023586)
HIX0023586
HIT000242845
(
AF190323
)
(Protein LIN-9/Protein ALWAYS EARLY family protein.)
genome : 226,418,850 - 226,496,873 (78,024)
query : 1 - 2,909 (2,909/2,909)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR010561 : Protein LIN-9/Protein ALWAYS EARLY
GO :
0006351 : Biological Process : transcription, DNA-templated
0007049 : Biological Process : cell cycle
0017053 : Cellular Component : transcriptional repressor complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 11, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023586)
HIX0023586
HIT000565635 (
ENST00000460719
)
(Protein lin-9 homolog isoform 2.)
genome : 226,418,850 - 226,496,873 (78,024)
query : 1 - 2,909 (2,909/2,909)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 11, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023586)
HIX0023586
HIT000348088 (
ENST00000366808
)
(Protein lin-9 homolog; HuLin-9; hLin-9; Beta subunit-associated regulator of apoptosis; TUDOR gene similar protein; Type I interferon receptor beta chain-associated protein; pRB-associated protein;)
genome : 226,418,858 - 226,497,570 (78,713)
query : 1 - 3,186 (3,186/3,186)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, mito 8, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023586)
HIX0023586
HIT000125422 (
ENST00000328205
)
(Protein lin-9 homolog; HuLin-9; hLin-9; Beta subunit-associated regulator of apoptosis; TUDOR gene similar protein; Type I interferon receptor beta chain-associated protein; pRB-associated protein;)
genome : 226,418,858 - 226,497,434 (78,577)
query : 1 - 3,567 (3,567/3,567)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12, cyto 8.5, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023586)
HIX0023586
HIT000242846
(
AF190324
)
(Protein lin-9 homolog; HuLin-9; hLin-9; Beta subunit-associated regulator of apoptosis; TUDOR gene similar protein; Type I interferon receptor beta chain-associated protein; pRB-associated protein;)
genome : 226,418,859 - 226,496,873 (78,015)
query : 1 - 3,005 (3,005/3,005)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR010561 : Protein LIN-9/Protein ALWAYS EARLY
GO :
0006351 : Biological Process : transcription, DNA-templated
0007049 : Biological Process : cell cycle
0017053 : Cellular Component : transcriptional repressor complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023586)
HIX0023586
HIT000348081 (
ENST00000366801
)
(Protein lin-9 homolog isoform 2.)
genome : 226,418,865 - 226,497,198 (78,334)
query : 1 - 3,219 (3,219/3,219)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 12.5, mito 7, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023586)
HIX0023586
HIT000046050
(
AK126177
)
(Conserved hypothetical protein.)
genome : 226,419,581 - 226,496,865 (77,285)
query : 1 - 2,170 (2,170/2,170)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, extr 13, cyto 10, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023586)
HIX0023586
HIT000257788
(
AY786184
)
(Protein lin-9 homolog; HuLin-9; hLin-9; Beta subunit-associated regulator of apoptosis; TUDOR gene similar protein; Type I interferon receptor beta chain-associated protein; pRB-associated protein;)
genome : 226,419,897 - 226,496,840 (76,944)
query : 1 - 1,934 (1,934/1,934)
15 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR010561 : Protein LIN-9/Protein ALWAYS EARLY
GO :
0006351 : Biological Process : transcription, DNA-templated
0007049 : Biological Process : cell cycle
0017053 : Cellular Component : transcriptional repressor complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023586)
HIX0023586
pHIT000003503 ( pHIT000003503 )
(Protein lin-9 homolog; HuLin-9; hLin-9; Beta subunit-associated regulator of apoptosis; TUDOR gene similar protein; Type I interferon receptor beta chain-associated protein; pRB-associated protein;)
genome : 226,420,202 - 226,497,576 (77,375)
query : 1 - 1,848 (1,848/1,848)
15 exons
InterPro :
IPR010561 : Protein LIN-9/Protein ALWAYS EARLY
GO :
0006351 : Biological Process : transcription, DNA-templated
0007049 : Biological Process : cell cycle
0017053 : Cellular Component : transcriptional repressor complex
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023586)
CAGE tag :
H22BA64C0613
HIX0023586
HIT000427689
(
AK308823
)
(Protein lin-9 homolog isoform 1.)
genome : 226,420,414 - 226,496,955 (76,542)
query : 1 - 1,916 (1,916/1,916)
13 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR010561 : Protein LIN-9/Protein ALWAYS EARLY
GO :
0006351 : Biological Process : transcription, DNA-templated
0007049 : Biological Process : cell cycle
0017053 : Cellular Component : transcriptional repressor complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 12.5, mito 7, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023586)
HIX0023586
HIT000585651 (
ENST00000481685
)
(Protein lin-9 homolog isoform 1.)
genome : 226,420,414 - 226,496,955 (76,542)
query : 1 - 1,916 (1,916/1,916)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 12.5, mito 7, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023586)
HIX0023586
HIT000084895
(
AY166859
)
(Protein lin-9 homolog isoform 1.)
genome : 226,421,111 - 226,497,434 (76,324)
query : 1 - 1,950 (1,950/2,138)
13 exons
identity = 0.960
3'(0.661;0.800;0.880;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.998)5'
coverage = 0.912
InterPro :
IPR010561 : Protein LIN-9/Protein ALWAYS EARLY
GO :
0006351 : Biological Process : transcription, DNA-templated
0007049 : Biological Process : cell cycle
0017053 : Cellular Component : transcriptional repressor complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 11.5, mito 8, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023586)
HIX0023586
HIT000313039 (
ENST00000359525
)
(Protein lin-9 homolog isoform 3.)
genome : 226,475,394 - 226,496,772 (21,379)
query : 1 - 686 (686/686)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, mito 8, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023586)
HIX0200180
HIT000539198 (
ENST00000441264
)
(Conserved hypothetical protein.)
genome : 226,505,716 - 226,506,394 (679)
query : 1 - 679 (679/679)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 7, extr_plas 7, nucl 5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200180)
HIX0213836
HIT000045523
(
AK125650
)
(Poly [ADP-ribose] polymerase 1; PARP-1; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 1; ARTD1; NAD(+) ADP-ribosyltransferase 1; ADPRT 1; Poly[ADP-ribose] synthase 1;)
genome : 226,548,996 - 226,558,816 (9,821)
query : 1 - 3,165 (3,165/3,165)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.999;1.000;
0.997)5'
coverage = 1.000
EC number :
EC 2.4.2.30
InterPro :
IPR004102 : Poly(ADP-ribose) polymerase, regulatory domain
GO :
0003950 : Molecular Function : NAD+ ADP-ribosyltransferase activity
0006471 : Biological Process : protein ADP-ribosylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, nucl 7.5, cyto_nucl 6.5, cyto 4.5, extr 2,
pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213836)
HIX0213836
HIT000594462 (
ENST00000490921
)
(Poly(ADP-ribose) polymerase, regulatory domain containing protein.)
genome : 226,548,996 - 226,558,816 (9,821)
query : 1 - 3,165 (3,165/3,165)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 3.5, cyto_nucl 3.5, pero 3, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213836)
HIX0213836
HIT000568739 (
ENST00000463968
)
(Poly(ADP-ribose) polymerase, catalytic domain containing protein.)
genome : 226,549,020 - 226,552,073 (3,054)
query : 1 - 830 (830/830)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213836)
HIX0213836
HIT000595329 (
ENST00000491816
)
(Poly(ADP-ribose) polymerase, catalytic domain containing protein.)
genome : 226,549,111 - 226,549,953 (843)
query : 1 - 416 (416/416)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 3, cyto 2.5, cyto_nucl 2.5, lyso 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213836)
HIX0213836
HIT000194511
(
M17081
)
Representative transcript
(Poly [ADP-ribose] polymerase 1; PARP-1; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 1; ARTD1; NAD(+) ADP-ribosyltransferase 1; ADPRT 1; Poly[ADP-ribose] synthase 1;)
genome : 226,549,115 - 226,567,845 (18,731)
query : 1 - 1,771 (1,771/1,771)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.995;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
InterPro :
IPR004102 : Poly(ADP-ribose) polymerase, regulatory domain
IPR008893 : WGR domain
IPR012317 : Poly(ADP-ribose) polymerase, catalytic domain
GO :
0003950 : Molecular Function : NAD+ ADP-ribosyltransferase activity
0006471 : Biological Process : protein ADP-ribosylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15, nucl 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213836)
HIX0213836
HIT000573164 (
ENST00000468608
)
(Poly(ADP-ribose) polymerase, catalytic domain containing protein.)
genome : 226,549,409 - 226,550,861 (1,453)
query : 1 - 438 (438/438)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, nucl 8, cyto_pero 8, cyto_plas 8,
cyto_golg 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213836)
HIX0213836
HIT000601995 (
ENST00000498787
)
(Poly(ADP-ribose) polymerase, regulatory domain containing protein.)
genome : 226,552,789 - 226,558,344 (5,556)
query : 1 - 628 (628/628)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 6, nucl 5.5, cyto 5.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213836)
HIX0213855
HIT000088322
(
BC014206
)
Representative transcript
(Zinc finger, PARP-type domain containing protein.)
genome : 226,576,401 - 226,595,780 (19,380)
query : 1 - 823 (823/902)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001510 : Zinc finger, PARP-type
GO :
0003677 : Molecular Function : DNA binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213855)
HIX0213855
HIT000089646
(
BC018620
)
(Zinc finger, PARP-type domain containing protein.)
genome : 226,576,401 - 226,595,761 (19,361)
query : 1 - 804 (804/827)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001510 : Zinc finger, PARP-type
GO :
0003677 : Molecular Function : DNA binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213855)
HIX0213855
HIT000050749
(
BC021045
)
(Zinc finger, PARP-type domain containing protein.)
genome : 226,576,401 - 226,595,635 (19,235)
query : 1 - 678 (678/695)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001510 : Zinc finger, PARP-type
GO :
0003677 : Molecular Function : DNA binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213855)
HIX0213855
HIT000087127
(
BC008660
)
(Zinc finger, PARP-type domain containing protein.)
genome : 226,576,401 - 226,595,776 (19,376)
query : 1 - 819 (819/833)
5 exons
identity = 0.998
3'(1.000;1.000;1.000;0.994;0.996)5'
coverage = 1.000
InterPro :
IPR001510 : Zinc finger, PARP-type
GO :
0003677 : Molecular Function : DNA binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213855)
HIX0213855
HIT000079103
(
AF401218
)
(Zinc finger, PARP-type domain containing protein.)
genome : 226,576,396 - 226,578,197 (1,802)
query : 1 - 148 (148/148)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001510 : Zinc finger, PARP-type
GO :
0003677 : Molecular Function : DNA binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213855)
HIX0213855
HIT000574177 (
ENST00000469663
)
(Zinc finger, PARP-type domain containing protein.)
genome : 226,576,399 - 226,580,493 (4,095)
query : 1 - 542 (542/542)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15.5, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213855)
HIX0213855
HIT000348072 (
ENST00000366792
)
(Zinc finger, PARP-type domain containing protein.)
genome : 226,579,959 - 226,595,776 (15,818)
query : 1 - 553 (553/553)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213855)
HIX0213855
HIT000348071 (
ENST00000366791
)
(Zinc finger, PARP-type domain containing protein.)
genome : 226,580,641 - 226,595,780 (15,140)
query : 1 - 477 (477/477)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213855)
HIX0213855
HIT000348070 (
ENST00000366790
)
(Zinc finger, PARP-type domain containing protein.)
genome : 226,589,684 - 226,595,683 (6,000)
query : 1 - 570 (570/570)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213855)
HIX0160216
HIT000509520 (
ENST00000411586
)
(Ribosomal protein S3Ae family protein.)
genome : 226,626,265 - 226,627,045 (781)
query : 1 - 781 (781/781)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 9, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160216)
HIX0203421
HIT000565218 (
ENST00000460287
)
(Protein of unknown function DUF3469 family protein.)
genome : 226,680,889 - 226,681,190 (302)
query : 1 - 302 (302/302)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 10, cyto 10, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203421)
HIX0203421
HIT000635192 (
ENST00000536147
)
(Protein of unknown function DUF3469 family protein.)
genome : 226,680,889 - 226,681,137 (249)
query : 1 - 249 (249/249)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 11, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203421)
HIX0021905
HIT000012470
(
AK055856
)
Representative transcript
(Conserved hypothetical protein.)
genome : 226,723,319 - 226,730,469 (7,151)
query : 1 - 3,333 (3,333/3,333)
3 exons
identity = 0.998
3'(0.998;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 11, cyto_nucl 10.5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021905)
HIX0001644
HIT000315711 (
NM_001003665
)
(Uncharacterized membrane protein C1orf95;)
genome : 226,736,501 - 226,796,915 (60,415)
query : 1 - 7,705 (7,705/7,713)
3 exons
identity = 0.999
5'(1.000;0.984;0.999)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001644)
HIX0001644
HIT000348068 (
ENST00000366788
)
(Uncharacterized membrane protein C1orf95;)
genome : 226,736,501 - 226,796,915 (60,415)
query : 1 - 7,705 (7,705/7,705)
3 exons
identity = 0.999
5'(1.000;0.984;0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001644)
HIX0001644
HIT000348069 (
ENST00000366789
)
(Uncharacterized membrane protein C1orf95;)
genome : 226,736,501 - 226,796,915 (60,415)
query : 1 - 7,705 (7,705/7,705)
3 exons
identity = 0.999
5'(1.000;0.978;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001644)
HIX0001644
HIT000025795
(
AL137507
)
Representative transcript
(Uncharacterized membrane protein C1orf95;)
genome : 226,736,501 - 226,793,303 (56,803)
query : 1 - 4,093 (4,093/4,094)
3 exons
identity = 0.995
5'(1.000;0.984;0.995)3'
coverage = 1.000
InterPro :
IPR026673 : SPEC3/C1orf95
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001644)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : BC134608
Oryzias
sp. (Medaka) : ENSORLT00000021422
Pongo
sp. (Orangutan) : ENSPPYT00000000174
Tetraodon
sp. (Tetraodon) : GSTENT00020683001
Danio
sp. (Zebrafish) : NM_001030171
Rattus
sp. (Rat) : XM_001061318
Macaca
sp. (Macaque) : XM_001090058
Pan
sp. (Chimpanzee) : XM_001141113
Gallus
sp. (Chicken) : XM_001232617
Monodelphis
sp. (Opossum) : XM_001376966
Equus
sp. (Horse) : XM_001491484
Canis
sp. (Dog) : XM_849602
HIX0001644
HIT000390052
(
BC130005
)
(Uncharacterized membrane protein C1orf95;)
genome : 226,736,533 - 226,789,808 (53,276)
query : 1 - 566 (566/566)
3 exons
identity = 0.986
5'(1.000;0.984;0.953)3'
coverage = 1.000
InterPro :
IPR026673 : SPEC3/C1orf95
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001644)
HIX0001644
HIT000572103 (
ENST00000467495
)
(Non-protein coding transcript.)
genome : 226,788,290 - 226,789,895 (1,606)
query : 1 - 275 (275/275)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001644)
HIX0001644
HIT000063243
(
AF035308
)
(Hypothetical protein.)
genome : 226,793,666 - 226,796,180 (2,515)
query : 1 - 2,518 (2,518/2,542)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 7.5, cyto_pero 6.16667, cyto_nucl 6,
mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001644)
HIX0001645
HIT000245485
(
AJ242780
)
Representative transcript
(Inositol-trisphosphate 3-kinase B; EC=2.7.1.127; Inositol 1,4,5-trisphosphate 3-kinase B; IP3 3-kinase B; IP3K B; InsP 3-kinase B;)
genome : 226,819,393 - 226,925,210 (105,818)
query : 7 - 5,876 (5,870/5,883)
7 exons
identity = 0.997
3'(0.999;1.000;1.000;1.000;1.000;1.000;0.991)5'
coverage = 0.998
EC number :
EC 2.7.1.127
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR005522 : Inositol polyphosphate kinase
GO :
0008440 : Molecular Function : inositol-1,4,5-trisphosphate 3-kinase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 11, extr 6, cyto 4, mito 3,
extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001645)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AJ242781
Mus
sp. (Mouse) : AK039369
Bos
sp. (Cow) : ENSBTAT00000025755
Pongo
sp. (Orangutan) : ENSPPYT00000000173
Macaca
sp. (Macaque) : XM_001089940
Pan
sp. (Chimpanzee) : XM_001141527
Monodelphis
sp. (Opossum) : XM_001376990
Gallus
sp. (Chicken) : XM_415039
Canis
sp. (Dog) : XM_547504
Danio
sp. (Zebrafish) : XM_686383
HIX0001645
HIT000322075
(
X57206
)
(Inositol-trisphosphate 3-kinase B; EC=2.7.1.127; Inositol 1,4,5-trisphosphate 3-kinase B; IP3 3-kinase B; IP3K B; InsP 3-kinase B;)
genome : 226,819,393 - 226,923,831 (104,439)
query : 8 - 4,498 (4,491/4,505)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;0.997)5'
coverage = 0.997
EC number :
EC 2.7.1.127
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR005522 : Inositol polyphosphate kinase
GO :
0008440 : Molecular Function : inositol-1,4,5-trisphosphate 3-kinase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001645)
HIX0001645
HIT000199137 (
NM_002221
)
(Inositol-trisphosphate 3-kinase B; EC=2.7.1.127; Inositol 1,4,5-trisphosphate 3-kinase B; IP3 3-kinase B; IP3K B; InsP 3-kinase B;)
genome : 226,819,391 - 226,926,876 (107,486)
query : 1 - 6,162 (6,162/6,162)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.127
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 11, extr 6, cyto 4, mito 3,
extr_plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001645)
HIX0001645
HIT000527138 (
ENST00000429204
)
(Inositol-trisphosphate 3-kinase B; EC=2.7.1.127; Inositol 1,4,5-trisphosphate 3-kinase B; IP3 3-kinase B; IP3K B; InsP 3-kinase B;)
genome : 226,819,391 - 226,926,864 (107,474)
query : 1 - 6,150 (6,150/6,150)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.127
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 11, extr 6, cyto 4, mito 3,
extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001645)
HIX0001645
HIT000110836 (
ENST00000272117
)
(Inositol-trisphosphate 3-kinase B; EC=2.7.1.127; Inositol 1,4,5-trisphosphate 3-kinase B; IP3 3-kinase B; IP3K B; InsP 3-kinase B;)
genome : 226,819,391 - 226,925,159 (105,769)
query : 1 - 5,822 (5,822/5,822)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.127
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 11, extr 6, cyto 4, mito 3,
extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001645)
HIX0001645
HIT000326064
(
Y18024
)
(Inositol-trisphosphate 3-kinase B; EC=2.7.1.127; Inositol 1,4,5-trisphosphate 3-kinase B; IP3 3-kinase B; IP3K B; InsP 3-kinase B;)
genome : 226,822,213 - 226,925,159 (102,947)
query : 1 - 3,000 (3,000/3,007)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;0.995;1.000;1.000;0.998)5'
coverage = 0.998
EC number :
EC 2.7.1.127
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR005522 : Inositol polyphosphate kinase
GO :
0008440 : Molecular Function : inositol-1,4,5-trisphosphate 3-kinase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 11, extr 6, cyto 4, mito 3,
extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001645)
HIX0001645
HIT000422497
(
AK289700
)
(Inositol-trisphosphate 3-kinase B; EC=2.7.1.127; Inositol 1,4,5-trisphosphate 3-kinase B; IP3 3-kinase B; IP3K B; InsP 3-kinase B;)
genome : 226,822,224 - 226,923,945 (101,722)
query : 1 - 1,775 (1,775/1,775)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.999)5'
coverage = 1.000
EC number :
EC 2.7.1.127
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR005522 : Inositol polyphosphate kinase
GO :
0008440 : Molecular Function : inositol-1,4,5-trisphosphate 3-kinase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001645)
HIX0001645
HIT000331864
(
AY513281
)
(Inositol-trisphosphate 3-kinase B; EC=2.7.1.127; Inositol 1,4,5-trisphosphate 3-kinase B; IP3 3-kinase B; IP3K B; InsP 3-kinase B;)
genome : 226,822,267 - 226,923,740 (101,474)
query : 1 - 1,527 (1,527/1,527)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.996)5'
coverage = 1.000
EC number :
EC 2.7.1.127
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR005522 : Inositol polyphosphate kinase
GO :
0008440 : Molecular Function : inositol-1,4,5-trisphosphate 3-kinase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001645)
HIX0001645
HIT000432667
(
AK313801
)
(Inositol-trisphosphate 3-kinase B; EC=2.7.1.127; Inositol 1,4,5-trisphosphate 3-kinase B; IP3 3-kinase B; IP3K B; InsP 3-kinase B;)
genome : 226,822,372 - 226,923,962 (101,591)
query : 1 - 1,646 (1,646/1,646)
7 exons
identity = 0.998
3'(1.000;1.000;1.000;0.995;1.000;1.000;0.996)5'
coverage = 1.000
EC number :
EC 2.7.1.127
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR005522 : Inositol polyphosphate kinase
GO :
0008440 : Molecular Function : inositol-1,4,5-trisphosphate 3-kinase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 17, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001645)
HIX0001645
HIT000008578
(
AK025304
)
(Inositol-trisphosphate 3-kinase B; EC=2.7.1.127; Inositol 1,4,5-trisphosphate 3-kinase B; IP3 3-kinase B; IP3K B; InsP 3-kinase B;)
genome : 226,826,773 - 226,829,156 (2,384)
query : 1 - 2,383 (2,383/2,404)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
EC number :
EC 2.7.1.127
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR005522 : Inositol polyphosphate kinase
GO :
0008440 : Molecular Function : inositol-1,4,5-trisphosphate 3-kinase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 9, cyto_nucl 7.66667, mito_pero 7.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001645)
HIX0159775
HIT000541356 (
ENST00000443422
)
(Hypothetical short protein.)
genome : 226,844,341 - 226,847,371 (3,031)
query : 1 - 719 (719/719)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159775)
HIX0159775
HIT000510852 (
ENST00000412918
)
(Hypothetical short protein.)
genome : 226,844,381 - 226,862,768 (18,388)
query : 1 - 746 (746/746)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159775)
HIX0161427
HIT000551459 (
ENST00000453525
)
(Conserved hypothetical protein.)
genome : 226,856,598 - 226,864,046 (7,449)
query : 1 - 538 (538/538)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 8, cyto 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161427)
HIX0023679
HIT000043663
(
AK123790
)
Representative transcript
(Conserved hypothetical protein.)
genome : 226,885,385 - 226,888,166 (2,782)
query : 1 - 2,782 (2,782/2,782)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, nucl 9.5, cyto_nucl 7.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023679)
HIX0001645
HIT000036957
(
BC015009
)
(Inositol-trisphosphate 3-kinase B; EC=2.7.1.127; Inositol 1,4,5-trisphosphate 3-kinase B; IP3 3-kinase B; IP3K B; InsP 3-kinase B;)
genome : 226,894,896 - 226,926,876 (31,981)
query : 1 - 2,993 (2,993/3,010)
3 exons
identity = 0.999
3'(1.000;0.999;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.127
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR005522 : Inositol polyphosphate kinase
GO :
0008440 : Molecular Function : inositol-1,4,5-trisphosphate 3-kinase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, extr 10, cyto_nucl 7.5, lyso 5,
extr_plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001645)
HIX0001645
HIT000348064 (
ENST00000366784
)
(Inositol-trisphosphate 3-kinase B; EC=2.7.1.127; Inositol 1,4,5-trisphosphate 3-kinase B; IP3 3-kinase B; IP3K B; InsP 3-kinase B;)
genome : 226,894,891 - 226,927,024 (32,134)
query : 1 - 3,146 (3,146/3,146)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.127
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, extr 10, cyto_nucl 7.5, lyso 5,
extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001645)
HIX0029405
HIT000266137
(
BC086865
)
Representative transcript
(Conserved hypothetical protein.)
genome : 226,909,528 - 226,912,081 (2,554)
query : 13 - 2,566 (2,554/2,610)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029405)
HIX0001646
HIT000020756
(
AK095901
)
Representative transcript
(Hypothetical short protein.)
genome : 226,920,314 - 226,922,612 (2,299)
query : 1 - 2,299 (2,299/2,299)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 8, cyto 5, cyto_pero 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001646)
HIX0161178
HIT000542181 (
ENST00000444247
)
(Ribosomal protein S27e family protein.)
genome : 226,969,202 - 226,969,445 (244)
query : 1 - 244 (244/244)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 9.5, cyto_nucl 9, cyto 7.5,
extr_plas 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161178)
HIX0001647
HIT000623460 (
ENST00000524196
)
(Hypothetical short protein.)
genome : 227,057,885 - 227,069,671 (11,787)
query : 1 - 734 (734/734)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 10, extr 6, mito 6, cyto 3.5,
mito_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001647)
HIX0001647
HIT000348063 (
ENST00000366783
)
(Presenilin-2; PS-2; EC=3.4.23.-; AD3LP; AD5; E5-1; STM-2; Contains: Presenilin-2 NTF subunit; Contains: Presenilin-2 CTF subunit;)
genome : 227,058,264 - 227,083,799 (25,536)
query : 1 - 2,302 (2,302/2,302)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.23.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29, E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001647)
HIX0001647
HIT000197491 (
NM_000447
)
(Presenilin-2; PS-2; EC=3.4.23.-; AD3LP; AD5; E5-1; STM-2; Contains: Presenilin-2 NTF subunit; Contains: Presenilin-2 CTF subunit;)
genome : 227,058,273 - 227,083,804 (25,532)
query : 1 - 2,298 (2,298/2,302)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
EC number :
EC 3.4.23.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29, E.R._golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001647)
HIX0001647
HIT000204216 (
NM_012486
)
(Presenilin-2; PS-2; EC=3.4.23.-; AD3LP; AD5; E5-1; STM-2; Contains: Presenilin-2 NTF subunit; Contains: Presenilin-2 CTF subunit;)
genome : 227,058,273 - 227,083,804 (25,532)
query : 1 - 2,295 (2,295/2,299)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
EC number :
EC 3.4.23.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29, E.R._golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001647)
HIX0001647
HIT000132818 (
ENST00000340188
)
(Presenilin-2; PS-2; EC=3.4.23.-; AD3LP; AD5; E5-1; STM-2; Contains: Presenilin-2 NTF subunit; Contains: Presenilin-2 CTF subunit;)
genome : 227,058,273 - 227,083,806 (25,534)
query : 1 - 2,201 (2,201/2,201)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.23.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001647)
HIX0001647
HIT000598849 (
ENST00000495488
)
(Presenilin-2; PS-2; EC=3.4.23.-; AD3LP; AD5; E5-1; STM-2; Contains: Presenilin-2 NTF subunit; Contains: Presenilin-2 CTF subunit;)
genome : 227,058,317 - 227,073,269 (14,953)
query : 1 - 627 (627/627)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.23.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, nucl 3, E.R. 2, cyto_nucl 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001647)
HIX0001647
HIT000495767
(
AK301143
)
(Presenilin-2; PS-2; EC=3.4.23.-; AD3LP; AD5; E5-1; STM-2; Contains: Presenilin-2 NTF subunit; Contains: Presenilin-2 CTF subunit;)
genome : 227,058,321 - 227,083,298 (24,978)
query : 2 - 1,541 (1,540/1,541)
12 exons
identity = 0.997
5'(1.000;1.000;1.000;0.981;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 3.4.23.-
InterPro :
IPR001108 : Peptidase A22A, presenilin
IPR001493 : Peptidase A22A, presenilin 2
IPR006639 : Presenilin/signal peptide peptidase
GO :
0004190 : Molecular Function : aspartic-type endopeptidase activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0035556 : Biological Process : intracellular signal transduction
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001647)
HIX0001647
HIT000520174 (
ENST00000422240
)
(Presenilin-2; PS-2; EC=3.4.23.-; AD3LP; AD5; E5-1; STM-2; Contains: Presenilin-2 NTF subunit; Contains: Presenilin-2 CTF subunit;)
genome : 227,058,321 - 227,083,504 (25,184)
query : 1 - 1,947 (1,947/1,947)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.23.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29, E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001647)
HIX0001647
HIT000425096
(
AK292299
)
Representative transcript
(Presenilin-2; PS-2; EC=3.4.23.-; AD3LP; AD5; E5-1; STM-2; Contains: Presenilin-2 NTF subunit; Contains: Presenilin-2 CTF subunit;)
genome : 227,058,321 - 227,083,417 (25,097)
query : 1 - 1,860 (1,860/1,860)
13 exons
identity = 0.998
5'(1.000;1.000;1.000;0.988;0.995;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.23.-
InterPro :
IPR001108 : Peptidase A22A, presenilin
IPR001493 : Peptidase A22A, presenilin 2
IPR006639 : Presenilin/signal peptide peptidase
GO :
0004190 : Molecular Function : aspartic-type endopeptidase activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0035556 : Biological Process : intracellular signal transduction
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001647)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : AF178539
Mus
sp. (Mouse) : AK148111
Gallus
sp. (Chicken) : AY486554
Bos
sp. (Cow) : BC112811
Tetraodon
sp. (Tetraodon) : CR647350
Pongo
sp. (Orangutan) : CR858231
Monodelphis
sp. (Opossum) : ENSMODT00000007728
Takifugu
sp. (Fugu) : SINFRUT00000172776
Rattus
sp. (Rat) : X99267
Macaca
sp. (Macaque) : XM_001087264
Pan
sp. (Chimpanzee) : XM_001142009
Equus
sp. (Horse) : XM_001489714
HIX0001647
HIT000620748 (
ENST00000521431
)
(Hypothetical short protein.)
genome : 227,058,564 - 227,063,253 (4,690)
query : 1 - 730 (730/730)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001647)
HIX0001647
HIT000193896
(
L43964
)
(Presenilin-2; PS-2; EC=3.4.23.-; AD3LP; AD5; E5-1; STM-2; Contains: Presenilin-2 NTF subunit; Contains: Presenilin-2 CTF subunit;)
genome : 227,058,960 - 227,083,799 (24,840)
query : 16 - 2,233 (2,218/2,236)
12 exons
identity = 0.999
5'(0.993;1.000;0.994;1.000;0.993;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.992
EC number :
EC 3.4.23.-
InterPro :
IPR001108 : Peptidase A22A, presenilin
IPR001493 : Peptidase A22A, presenilin 2
IPR006639 : Presenilin/signal peptide peptidase
GO :
0004190 : Molecular Function : aspartic-type endopeptidase activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0035556 : Biological Process : intracellular signal transduction
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001647)
HIX0001647
HIT000193897
(
L44577
)
(Presenilin-2; PS-2; EC=3.4.23.-; AD3LP; AD5; E5-1; STM-2; Contains: Presenilin-2 NTF subunit; Contains: Presenilin-2 CTF subunit;)
genome : 227,058,962 - 227,083,797 (24,836)
query : 15 - 2,229 (2,215/2,229)
12 exons
identity = 0.991
5'(1.000;0.995;0.988;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.975)3'
coverage = 0.994
EC number :
EC 3.4.23.-
InterPro :
IPR001108 : Peptidase A22A, presenilin
IPR001493 : Peptidase A22A, presenilin 2
IPR006639 : Presenilin/signal peptide peptidase
GO :
0004190 : Molecular Function : aspartic-type endopeptidase activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0035556 : Biological Process : intracellular signal transduction
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001647)
HIX0001647
HIT000565691 (
ENST00000460775
)
(Presenilin-2; PS-2; EC=3.4.23.-; AD3LP; AD5; E5-1; STM-2; Contains: Presenilin-2 NTF subunit; Contains: Presenilin-2 CTF subunit;)
genome : 227,058,965 - 227,079,045 (20,081)
query : 1 - 782 (782/782)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.23.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, E.R. 4, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001647)
HIX0001647
HIT000032787
(
BC006365
)
(Presenilin-2; PS-2; EC=3.4.23.-; AD3LP; AD5; E5-1; STM-2; Contains: Presenilin-2 NTF subunit; Contains: Presenilin-2 CTF subunit;)
genome : 227,058,969 - 227,083,798 (24,830)
query : 1 - 2,486 (2,486/2,508)
13 exons
identity = 0.990
5'(1.000;1.000;0.921;0.988;0.995;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.4.23.-
InterPro :
IPR001108 : Peptidase A22A, presenilin
IPR001493 : Peptidase A22A, presenilin 2
IPR006639 : Presenilin/signal peptide peptidase
GO :
0004190 : Molecular Function : aspartic-type endopeptidase activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0035556 : Biological Process : intracellular signal transduction
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001647)
HIX0001647
HIT000348062 (
ENST00000366782
)
(Presenilin-2; PS-2; EC=3.4.23.-; AD3LP; AD5; E5-1; STM-2; Contains: Presenilin-2 NTF subunit; Contains: Presenilin-2 CTF subunit;)
genome : 227,058,969 - 227,083,799 (24,831)
query : 1 - 2,465 (2,465/2,465)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.23.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001647)
HIX0001647
HIT000219377
(
U34349
)
(Presenilin-2; PS-2; EC=3.4.23.-; AD3LP; AD5; E5-1; STM-2; Contains: Presenilin-2 NTF subunit; Contains: Presenilin-2 CTF subunit;)
genome : 227,063,198 - 227,083,798 (20,601)
query : 18 - 1,685 (1,668/1,705)
12 exons
identity = 0.995
5'(0.981;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;0.990;1.000;0.963;0.993)3'
coverage = 0.990
EC number :
EC 3.4.23.-
InterPro :
IPR001108 : Peptidase A22A, presenilin
IPR001493 : Peptidase A22A, presenilin 2
IPR006639 : Presenilin/signal peptide peptidase
GO :
0004190 : Molecular Function : aspartic-type endopeptidase activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0035556 : Biological Process : intracellular signal transduction
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001647)
HIX0001647
HIT000079309
(
AF416718
)
(Presenilin-2; PS-2; EC=3.4.23.-; AD3LP; AD5; E5-1; STM-2; Contains: Presenilin-2 NTF subunit; Contains: Presenilin-2 CTF subunit;)
genome : 227,063,204 - 227,081,807 (18,604)
query : 1 - 1,240 (1,240/1,240)
10 exons
identity = 0.998
5'(1.000;0.994;1.000;0.993;1.000;1.000;0.990;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.23.-
InterPro :
IPR001108 : Peptidase A22A, presenilin
IPR001493 : Peptidase A22A, presenilin 2
IPR006639 : Presenilin/signal peptide peptidase
GO :
0004190 : Molecular Function : aspartic-type endopeptidase activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0035556 : Biological Process : intracellular signal transduction
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 3.5, E.R._golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001647)
HIX0001647
HIT000475370 (
ENST00000391872
)
(Presenilin-2; PS-2; EC=3.4.23.-; AD3LP; AD5; E5-1; STM-2; Contains: Presenilin-2 NTF subunit; Contains: Presenilin-2 CTF subunit;)
genome : 227,068,347 - 227,083,806 (15,460)
query : 1 - 1,972 (1,972/1,972)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.23.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001647)
HIX0001647
HIT000600262 (
ENST00000496965
)
(Presenilin-2; PS-2; EC=3.4.23.-; AD3LP; AD5; E5-1; STM-2; Contains: Presenilin-2 NTF subunit; Contains: Presenilin-2 CTF subunit;)
genome : 227,069,589 - 227,083,799 (14,211)
query : 1 - 1,614 (1,614/1,614)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.23.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 3.5, E.R._golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001647)
HIX0001647
HIT000099904
(
BT006984
)
(Presenilin-2; PS-2; EC=3.4.23.-; AD3LP; AD5; E5-1; STM-2; Contains: Presenilin-2 NTF subunit; Contains: Presenilin-2 CTF subunit;)
genome : 227,069,609 - 227,083,278 (13,670)
query : 1 - 1,345 (1,345/1,347)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.995;1.000;0.988;
1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 3.4.23.-
InterPro :
IPR001108 : Peptidase A22A, presenilin
IPR001493 : Peptidase A22A, presenilin 2
IPR006639 : Presenilin/signal peptide peptidase
GO :
0004190 : Molecular Function : aspartic-type endopeptidase activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0035556 : Biological Process : intracellular signal transduction
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001647)
HIX0001647
HIT000576530 (
ENST00000472139
)
(Presenilin-2; PS-2; EC=3.4.23.-; AD3LP; AD5; E5-1; STM-2; Contains: Presenilin-2 NTF subunit; Contains: Presenilin-2 CTF subunit;)
genome : 227,072,324 - 227,083,392 (11,069)
query : 1 - 1,163 (1,163/1,163)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.23.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001647)
HIX0001647
HIT000591153 (
ENST00000487450
)
(Presenilin-2 isoform 2.)
genome : 227,078,267 - 227,079,521 (1,255)
query : 1 - 566 (566/566)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 4.5, cyto_nucl 4.33333, cyto 3,
cyto_pero 2.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001647)
HIX0001647
HIT000576140 (
ENST00000471728
)
(Presenilin-2; PS-2; EC=3.4.23.-; AD3LP; AD5; E5-1; STM-2; Contains: Presenilin-2 NTF subunit; Contains: Presenilin-2 CTF subunit;)
genome : 227,078,520 - 227,083,245 (4,726)
query : 1 - 570 (570/570)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.23.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 8, plas 7, cyto_nucl 7, nucl 6.5, cyto 4.5,
E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001647)
HIX0001648
HIT000043853
(
AK123980
)
(Conserved hypothetical protein.)
genome : 227,084,589 - 227,091,365 (6,777)
query : 1 - 2,831 (2,831/2,831)
2 exons
identity = 0.998
5'(0.998;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 24, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000046339
(
AK126466
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,085,237 - 227,175,246 (90,010)
query : 1 - 5,524 (5,524/5,524)
20 exons
identity = 0.998
5'(0.999;1.000;1.000;0.988;1.000;1.000;0.995;
0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991;1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 2.7.11.-
InterPro :
IPR004147 : UbiB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 6.5, cyto_pero 5.5, extr 4, pero 3.5,
nucl 2, extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000348059 (
ENST00000366779
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,085,237 - 227,175,246 (90,010)
query : 1 - 5,523 (5,523/5,523)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 6.5, cyto_pero 5.5, extr 4, pero 3.5,
nucl 2, extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000589473 (
ENST00000485677
)
(Non-protein coding transcript.)
genome : 227,087,106 - 227,091,500 (4,395)
query : 1 - 449 (449/449)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000390003
(
BC129930
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,087,135 - 227,171,556 (84,422)
query : 20 - 2,271 (2,252/2,288)
16 exons
identity = 0.996
5'(0.992;1.000;1.000;0.959;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.989)3'
coverage = 0.984
EC number :
EC 2.7.11.-
InterPro :
IPR004147 : UbiB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 6.5, cyto_nucl 6, extr 5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000207832 (
NM_020247
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,938 - 227,175,246 (47,309)
query : 1 - 2,924 (2,924/2,932)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.997
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 6.5, cyto_pero 5.5, extr 4, pero 3.5,
nucl 2, extr_plas 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000057507
(
BX648860
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,987 - 227,175,245 (47,259)
query : 2 - 2,745 (2,744/2,760)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.991;1.000;1.000;
0.997)3'
coverage = 0.999
EC number :
EC 2.7.11.-
InterPro :
IPR004147 : UbiB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.8333, nucl 12.5, cyto 12,
cyto_golg 7.83333, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000348058 (
ENST00000366778
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,987 - 227,175,245 (47,259)
query : 1 - 2,743 (2,743/2,743)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.8333, nucl 12.5, cyto 12,
cyto_golg 7.83333, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000032262
(
BC005171
)
Representative transcript
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,989 - 227,175,244 (47,256)
query : 1 - 2,871 (2,871/2,913)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.989;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
EC number :
EC 2.7.11.-
InterPro :
IPR004147 : UbiB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 6.5, cyto_pero 5.5, extr 4, pero 3.5,
nucl 2, extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK014605
Danio
sp. (Zebrafish) : BC076083
Rattus
sp. (Rat) : BC091388
Bos
sp. (Cow) : BC114164
Tetraodon
sp. (Tetraodon) : CR678242
Monodelphis
sp. (Opossum) : ENSMODT00000036706
Oryzias
sp. (Medaka) : ENSORLT00000021446
Pongo
sp. (Orangutan) : ENSPPYT00000000170
Takifugu
sp. (Fugu) : SINFRUT00000143815
Macaca
sp. (Macaque) : XM_001089241
Equus
sp. (Horse) : XM_001491544
Gallus
sp. (Chicken) : XM_415040
Pan
sp. (Chimpanzee) : XM_514248
Canis
sp. (Dog) : XM_537230
Danio
sp. (Zebrafish) : XM_693745
HIX0001648
HIT000348057 (
ENST00000366777
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,989 - 227,175,245 (47,257)
query : 1 - 2,872 (2,872/2,872)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 6.5, cyto_pero 5.5, extr 4, pero 3.5,
nucl 2, extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000017651
(
AK092784
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,995 - 227,175,246 (47,252)
query : 4 - 2,647 (2,644/2,647)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 0.999
EC number :
EC 2.7.11.-
InterPro :
IPR004147 : UbiB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14, cyto 9.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000348056 (
ENST00000366776
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,995 - 227,175,246 (47,252)
query : 1 - 2,642 (2,642/2,642)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 8, mito_nucl 8, cyto_pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000046073
(
AK126200
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,995 - 227,175,244 (47,250)
query : 1 - 3,611 (3,611/3,611)
8 exons
identity = 0.998
5'(1.000;1.000;0.999;0.997;0.991;1.000;0.989;
0.998)3'
coverage = 1.000
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 10.5, cyto_nucl 8.5, pero 4, nucl 3.5,
mito_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000582514 (
ENST00000478406
)
(Uncharacterized aarF domain-containing protein kinase 4; EC=2.7.11.-;)
genome : 227,127,995 - 227,175,244 (47,250)
query : 1 - 3,612 (3,612/3,612)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, cyto_nucl 9, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000081728
(
AK074693
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,995 - 227,175,239 (47,245)
query : 1 - 2,860 (2,860/2,860)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.984;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 1.000
EC number :
EC 2.7.11.-
InterPro :
IPR004147 : UbiB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 7.5, cyto_pero 6, extr 4, pero 3.5,
nucl 2, lyso 2, extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000492359
(
AK297735
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,995 - 227,175,050 (47,056)
query : 1 - 2,007 (2,007/2,007)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.991;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.7.11.-
InterPro :
IPR004147 : UbiB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 6.5, cyto_pero 6.33333,
cyto_nucl 6.16667, nucl 4.5, pero 4, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000556441 (
ENST00000458507
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,995 - 227,175,050 (47,056)
query : 1 - 2,007 (2,007/2,007)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 6.5, cyto_pero 6.33333,
cyto_nucl 5.66667, pero 4, nucl 3.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000488195
(
AK293571
)
(Uncharacterized aarF domain-containing protein kinase 4; EC=2.7.11.-;)
genome : 227,127,995 - 227,174,678 (46,684)
query : 1 - 1,719 (1,719/1,719)
12 exons
identity = 0.995
5'(1.000;0.995;1.000;0.980;1.000;1.000;1.000;
1.000;1.000;0.985;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, cyto_nucl 18, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000015361
(
AK090494
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,999 - 227,175,245 (47,247)
query : 1 - 2,660 (2,660/2,660)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
InterPro :
IPR004147 : UbiB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 15, nucl 4, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000348055 (
ENST00000366775
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,999 - 227,175,245 (47,247)
query : 1 - 2,660 (2,660/2,660)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 15, nucl 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000495636
(
AK301012
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,999 - 227,174,738 (46,740)
query : 1 - 2,337 (2,337/2,337)
17 exons
identity = 0.996
5'(1.000;1.000;0.993;1.000;0.981;1.000;1.000;
1.000;1.000;1.000;0.988;1.000;1.000;0.991;
1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 2.7.11.-
InterPro :
IPR004147 : UbiB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12.3333, cyto_pero 8.66667,
nucl 7, extr 4, mito 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000061229
(
AB073905
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,128,015 - 227,175,244 (47,230)
query : 1 - 2,847 (2,847/2,870)
15 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.991;1.000;1.000;
0.996)3'
coverage = 1.000
EC number :
EC 2.7.11.-
InterPro :
IPR004147 : UbiB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 6.5, cyto_pero 5.5, extr 4, pero 3.5,
nucl 2, extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000592661 (
ENST00000489044
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,128,080 - 227,165,224 (37,145)
query : 1 - 941 (941/941)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, mito 10, cyto_nucl 7.5, extr 6, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0161008
HIT000536829 (
ENST00000438895
)
(NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 family protein.)
genome : 227,145,770 - 227,145,968 (199)
query : 1 - 199 (199/199)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, mito 6, lyso 3, cyto_mito 3, mito_pero 3,
mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161008)
HIX0001648
HIT000495161
(
AK300537
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,153,382 - 227,174,469 (21,088)
query : 1 - 1,236 (1,236/1,236)
11 exons
identity = 0.996
5'(1.000;0.987;1.000;1.000;1.000;0.989;1.000;
1.000;1.000;0.989;0.994)3'
coverage = 1.000
EC number :
EC 2.7.11.-
InterPro :
IPR004147 : UbiB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12.5, cysk 7, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000531677 (
ENST00000433743
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,153,382 - 227,174,469 (21,088)
query : 1 - 1,236 (1,236/1,236)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12.5, cysk 7, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000580680 (
ENST00000476488
)
(Non-protein coding transcript.)
genome : 227,162,556 - 227,165,188 (2,633)
query : 1 - 264 (264/264)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000246426
(
AJ278126
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,165,105 - 227,175,245 (10,141)
query : 1 - 2,142 (2,142/2,143)
11 exons
identity = 0.999
5'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.7.11.-
InterPro :
IPR004147 : UbiB domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, pero 9, lyso 7, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000589266 (
ENST00000485462
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,165,105 - 227,175,245 (10,141)
query : 1 - 2,141 (2,141/2,141)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 12, extr 11, E.R. 6, mito_pero 6, cyto_pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000074248
(
AF218003
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,170,708 - 227,175,245 (4,538)
query : 1 - 1,937 (1,937/1,969)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 0.999
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, cyto_nucl 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000583895 (
ENST00000479852
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,170,708 - 227,175,245 (4,538)
query : 1 - 1,938 (1,938/1,938)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, cyto_nucl 9, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000025799
(
AL137511
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,171,250 - 227,175,161 (3,912)
query : 19 - 1,608 (1,590/1,608)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 0.989
EC number :
EC 2.7.11.-
InterPro :
IPR004147 : UbiB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11, cysk 7, nucl 5.5, extr 2,
mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000569427 (
ENST00000464693
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,171,253 - 227,175,236 (3,984)
query : 1 - 419 (419/419)
4 exons
identity = 0.986
5'(1.000;1.000;0.976;0.975)3'
coverage = 1.000
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 8.5, cyto_nucl 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000594326 (
ENST00000490782
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,171,253 - 227,175,211 (3,959)
query : 1 - 487 (487/487)
4 exons
identity = 0.982
5'(1.000;1.000;1.000;0.963)3'
coverage = 1.000
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0213687
HIT000056866
(
BX648219
)
(Serine/threonine-protein kinase MRCK alpha; EC=2.7.11.1; CDC42-binding protein kinase alpha; DMPK-like alpha; Myotonic dystrophy kinase-related CDC42-binding kinase alpha; MRCK alpha; Myotonic dystrophy protein kinase-like alpha;)
genome : 227,177,561 - 227,223,311 (45,751)
query : 16 - 6,475 (6,460/6,494)
13 exons
identity = 0.996
3'(0.994;1.000;1.000;1.000;1.000;1.000;0.990;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR001180 : Citron-like
IPR001849 : Pleckstrin homology domain
IPR002219 : Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
IPR026611 : Serine/threonine-protein kinase MRCK alpha
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005083 : Molecular Function : small GTPase regulator activity
0031532 : Biological Process : actin cytoskeleton reorganization
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 15.5, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213687)
HIX0213687
HIT000259104
(
BC050335
)
(Serine/threonine-protein kinase MRCK alpha family protein.)
genome : 227,177,566 - 227,235,656 (58,091)
query : 1 - 6,586 (6,586/6,607)
15 exons
identity = 0.997
3'(0.995;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000095 : CRIB domain
IPR001180 : Citron-like
IPR001849 : Pleckstrin homology domain
IPR002219 : Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
IPR026611 : Serine/threonine-protein kinase MRCK alpha
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005083 : Molecular Function : small GTPase regulator activity
0031532 : Biological Process : actin cytoskeleton reorganization
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 15.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213687)
HIX0213687
HIT000000168
(
AB007920
)
(Conserved hypothetical protein.)
genome : 227,177,567 - 227,268,680 (91,114)
query : 1 - 7,335 (7,335/7,335)
21 exons
identity = 0.997
3'(0.995;0.987;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213687)
HIX0213687
HIT000546874 (
ENST00000448940
)
(Serine/threonine-protein kinase MRCK alpha family protein.)
genome : 227,177,567 - 227,268,680 (91,114)
query : 1 - 7,355 (7,355/7,355)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213687)
HIX0213687
HIT000389450
(
BC127831
)
(Hypothetical short protein.)
genome : 227,179,823 - 227,180,278 (456)
query : 2 - 456 (455/456)
1 exon
identity = 0.987
3'(0.987)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213687)
HIX0160852
HIT000531771 (
ENST00000433837
)
(Hypothetical short protein.)
genome : 227,179,841 - 227,180,907 (1,067)
query : 1 - 440 (440/440)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.6667, cyto 14, nucl 9, cyto_pero 9,
extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160852)
HIX0213687
HIT000306877
(
CR933723
)
Representative transcript
(Serine/threonine-protein kinase MRCK alpha isoform A.)
genome : 227,181,334 - 227,288,821 (107,488)
query : 1 - 3,780 (3,780/3,897)
23 exons
identity = 0.998
3'(0.999;0.994;1.000;0.992;1.000;1.000;1.000;
0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR001180 : Citron-like
IPR001849 : Pleckstrin homology domain
IPR002219 : Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
IPR014930 : Myotonic dystrophy protein kinase, coiled coil
IPR026611 : Serine/threonine-protein kinase MRCK alpha
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005083 : Molecular Function : small GTPase regulator activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0031532 : Biological Process : actin cytoskeleton reorganization
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213687)
HIX0213687
HIT000057340
(
BX648693
)
(Serine/threonine-protein kinase MRCK alpha isoform A.)
genome : 227,181,334 - 227,288,821 (107,488)
query : 1 - 3,780 (3,780/3,840)
23 exons
identity = 0.998
3'(0.999;0.994;1.000;0.992;1.000;1.000;1.000;
0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR001180 : Citron-like
IPR001849 : Pleckstrin homology domain
IPR002219 : Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
IPR014930 : Myotonic dystrophy protein kinase, coiled coil
IPR026611 : Serine/threonine-protein kinase MRCK alpha
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005083 : Molecular Function : small GTPase regulator activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0031532 : Biological Process : actin cytoskeleton reorganization
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213687)
HIX0213687
HIT000539988 (
ENST00000442054
)
(Serine/threonine-protein kinase MRCK alpha family protein.)
genome : 227,181,328 - 227,288,821 (107,494)
query : 1 - 3,786 (3,786/3,786)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213687)
HIX0213687
HIT000010274
(
AK027000
)
(Serine/threonine-protein kinase MRCK alpha family protein.)
genome : 227,191,771 - 227,222,418 (30,648)
query : 1 - 2,484 (2,484/2,503)
10 exons
identity = 0.998
3'(0.999;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;0.984)5'
coverage = 1.000
InterPro :
IPR000095 : CRIB domain
IPR001180 : Citron-like
IPR026611 : Serine/threonine-protein kinase MRCK alpha
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005083 : Molecular Function : small GTPase regulator activity
0031532 : Biological Process : actin cytoskeleton reorganization
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, mito_pero 9, cyto_nucl 8.5, cyto 8, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213687)
HIX0213687
HIT000527374 (
ENST00000429440
)
(Serine/threonine-protein kinase MRCK alpha family protein.)
genome : 227,191,771 - 227,222,418 (30,648)
query : 1 - 2,486 (2,486/2,501)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15, cyto 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213687)
HIX0213687
HIT000023221
(
AK098391
)
(Serine/threonine-protein kinase MRCK alpha isoform A.)
genome : 227,210,959 - 227,262,076 (51,118)
query : 4 - 2,201 (2,198/2,259)
16 exons
identity = 0.995
3'(0.967;1.000;0.997;0.984;1.000;1.000;1.000;
1.000;1.000;1.000;0.990;1.000;1.000;1.000;
1.000;0.966)5'
coverage = 0.973
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR001180 : Citron-like
IPR001849 : Pleckstrin homology domain
IPR002219 : Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
IPR014930 : Myotonic dystrophy protein kinase, coiled coil
IPR020454 : Diacylglycerol/phorbol-ester binding
IPR026611 : Serine/threonine-protein kinase MRCK alpha
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005083 : Molecular Function : small GTPase regulator activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0031532 : Biological Process : actin cytoskeleton reorganization
0035556 : Biological Process : intracellular signal transduction
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213687)
HIX0213687
HIT000539659 (
ENST00000441725
)
(Serine/threonine-protein kinase MRCK alpha family protein.)
genome : 227,210,964 - 227,262,065 (51,102)
query : 1 - 2,183 (2,183/2,183)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213687)
HIX0018758
HIT000038691
(
BC019830
)
(Conserved hypothetical protein.)
genome : 227,236,741 - 227,238,112 (1,372)
query : 1 - 1,377 (1,377/1,395)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 8.5, cyto 7, extr_plas 7, E.R._mito 5.83333,
cyto_plas 5.83333, plas 4.5, E.R. 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018758)
HIX0018758
HIT000070016
(
AF116681
)
Representative transcript
(Hypothetical protein.)
genome : 227,237,319 - 227,238,751 (1,433)
query : 2 - 1,437 (1,436/1,437)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018758)
HIX0023809
HIT000049508
(
AK130237
)
Representative transcript
(Conserved hypothetical protein.)
genome : 227,247,750 - 227,248,951 (1,202)
query : 1 - 1,200 (1,200/1,200)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.5, mito 10, nucl 5.5,
mito_pero 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023809)
HIX0213687
HIT000591791 (
ENST00000488131
)
(Myotonic dystrophy protein kinase, coiled coil domain containing protein.)
genome : 227,256,168 - 227,268,718 (12,551)
query : 1 - 1,859 (1,859/1,859)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213687)
HIX0214183
HIT000571185 (
ENST00000466538
)
(tRNA endonuclease-like domain containing protein.)
genome : 227,299,685 - 227,300,500 (816)
query : 1 - 568 (568/568)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 15, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214183)
HIX0213875
HIT000075028
(
AF250871
)
(Serine/threonine-protein kinase MRCK alpha family protein.)
genome : 227,300,508 - 227,327,332 (26,825)
query : 1 - 420 (420/420)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026611 : Serine/threonine-protein kinase MRCK alpha
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0031532 : Biological Process : actin cytoskeleton reorganization
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 10, nucl 6, E.R._mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213875)
HIX0029367
HIT000098651
(
BC047547
)
Representative transcript
(Conserved hypothetical protein.)
genome : 227,309,518 - 227,312,107 (2,590)
query : 1 - 2,590 (2,590/2,605)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 12, cyto 6, mito_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029367)
HIX0213875
HIT000220581
(
U59305
)
Representative transcript
(Serine/threonine-protein kinase MRCK alpha family protein.)
genome : 227,316,829 - 227,506,175 (189,347)
query : 1 - 2,783 (2,783/2,785)
11 exons
identity = 0.994
3'(0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.988)5'
coverage = 0.999
InterPro :
IPR000961 : AGC-kinase, C-terminal
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR017892 : Protein kinase, C-terminal
IPR026611 : Serine/threonine-protein kinase MRCK alpha
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0031532 : Biological Process : actin cytoskeleton reorganization
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_plas 11.5, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213875)
HIX0213875
HIT000095447
(
BC038993
)
(Serine/threonine-protein kinase MRCK alpha family protein.)
genome : 227,316,856 - 227,504,990 (188,135)
query : 12 - 1,586 (1,575/1,600)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.990;1.000;1.000;1.000)5'
coverage = 0.993
InterPro :
IPR000961 : AGC-kinase, C-terminal
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR017892 : Protein kinase, C-terminal
IPR026611 : Serine/threonine-protein kinase MRCK alpha
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0031532 : Biological Process : actin cytoskeleton reorganization
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_plas 12, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213875)
HIX0160573
HIT000522385 (
ENST00000424451
)
(Conserved hypothetical protein.)
genome : 227,366,034 - 227,371,145 (5,112)
query : 1 - 814 (814/814)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 7.5, nucl 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160573)
HIX0213875
HIT000582672 (
ENST00000478573
)
(Serine/threonine/dual specificity protein kinase, catalytic domain containing protein.)
genome : 227,381,352 - 227,504,748 (123,397)
query : 1 - 599 (599/599)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 10.5, mito 9, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213875)
HIX0213875
HIT000567382 (
ENST00000462553
)
(Conserved hypothetical protein.)
genome : 227,400,837 - 227,441,856 (41,020)
query : 1 - 334 (334/334)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, mito_pero 6.16667, mito 6, E.R._mito 4.66667,
extr 4, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213875)
HIX0160910
HIT000533627 (
ENST00000435693
)
(Conserved hypothetical protein.)
genome : 227,421,970 - 227,423,056 (1,087)
query : 1 - 821 (821/821)
2 exons
identity = 0.989
5'(1.000;0.971)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, nucl 7.5, cyto_nucl 7.5, extr 6, mito_pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160910)
HIX0160447
HIT000517948 (
ENST00000420014
)
(Conserved hypothetical protein.)
genome : 227,452,477 - 227,452,908 (432)
query : 1 - 432 (432/432)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, cyto 12, cysk 9, nucl 6, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160447)
HIX0029289
HIT000095625
(
BC039356
)
Representative transcript
(40S ribosomal protein S18; Ke-3; Ke3;)
genome : 227,581,292 - 227,618,722 (37,431)
query : 1 - 1,957 (1,957/1,972)
4 exons
identity = 0.996
5'(0.991;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR001892 : Ribosomal protein S13
IPR010979 : Ribosomal protein S13-like, H2TH
GO :
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 9, cyto_nucl 9, extr 6, nucl 5,
mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029289)
HIX0029289
HIT000543751 (
ENST00000445817
)
(40S ribosomal protein S18; Ke-3; Ke3;)
genome : 227,581,292 - 227,618,722 (37,431)
query : 1 - 1,957 (1,957/1,971)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 9, cyto_nucl 9, extr 6, nucl 5,
mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029289)
HIX0029289
HIT000534311 (
ENST00000436377
)
(Hypothetical short protein.)
genome : 227,597,466 - 227,613,758 (16,293)
query : 1 - 422 (422/422)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029289)
HIX0178378
HIT000550001 (
ENST00000452067
)
(Conserved hypothetical protein.)
genome : 227,598,318 - 227,599,020 (703)
query : 1 - 703 (703/703)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178378)
HIX0029289
HIT000545121 (
ENST00000447187
)
(40S ribosomal protein S18; Ke-3; Ke3;)
genome : 227,618,227 - 227,618,677 (451)
query : 1 - 451 (451/451)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 9, cyto_nucl 9, extr 6, nucl 5,
mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029289)
HIX0028772
HIT000260627
(
BC062736
)
Representative transcript
(Transcription factor BTF3; RNA polymerase B transcription factor 3;)
genome : 227,621,431 - 227,622,627 (1,197)
query : 4 - 1,200 (1,197/1,229)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.998
InterPro :
IPR002715 : Nascent polypeptide-associated complex NAC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12.6667, cyto_plas 10.5, mito 5,
nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028772)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : ENSBTAT00000023693
Monodelphis
sp. (Opossum) : ENSMODT00000006181
Pongo
sp. (Orangutan) : ENSPPYT00000000168
Macaca
sp. (Macaque) : XM_001087891
Pan
sp. (Chimpanzee) : XR_020432
HIX0028772
HIT000516718 (
ENST00000418784
)
(Transcription factor BTF3; RNA polymerase B transcription factor 3;)
genome : 227,621,765 - 227,622,047 (283)
query : 1 - 283 (283/283)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 8, cyto_nucl 7.5, nucl 5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028772)
HIX0160474
HIT000518830 (
ENST00000420896
)
(Conserved hypothetical protein.)
genome : 227,669,954 - 227,670,155 (202)
query : 1 - 202 (202/202)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 5.5, cyto_nucl 5.5, cyto 4.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160474)
HIX0178208
HIT000528144 (
ENST00000430210
)
(Epsilon tubulin family protein.)
genome : 227,680,730 - 227,682,843 (2,114)
query : 1 - 1,279 (1,279/1,279)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 7, cyto_mito 6.66667, cyto 6,
mito 5.5, cyto_pero 4.83333, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178208)
HIX0178246
HIT000520468 (
ENST00000422534
)
(Epsilon tubulin family protein.)
genome : 227,693,883 - 227,695,993 (2,111)
query : 1 - 1,276 (1,276/1,276)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 7, cyto_mito 6.66667, cyto 6,
mito 5.5, cyto_pero 4.83333, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178246)
HIX0160535
HIT000520771 (
ENST00000422837
)
(Hypothetical short protein.)
genome : 227,698,297 - 227,708,178 (9,882)
query : 1 - 619 (619/619)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 14.5, cyto 9, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160535)
HIX0023858
HIT000727773 (
NR_102302
)
(Zinc finger protein 678.)
genome : 227,751,220 - 227,865,144 (113,925)
query : 1 - 953 (953/953)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 3, cyto_nucl 2, golg 2, nucl 1.5,
cyto 1.5, E.R._mito 1.5, mito_pero 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023858)
HIX0023858
HIT000318148 (
NM_178549
)
(Zinc finger protein 678.)
genome : 227,751,220 - 227,850,164 (98,945)
query : 1 - 8,554 (8,554/8,565)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023858)
HIX0023858
HIT000658689 (
NR_033184
)
(Zinc finger protein 99;)
genome : 227,751,220 - 227,850,164 (98,945)
query : 1 - 8,582 (8,582/8,593)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023858)
HIX0023858
HIT000009749
(
AK026475
)
(Conserved hypothetical protein.)
genome : 227,751,236 - 227,847,582 (96,347)
query : 1 - 3,038 (3,038/3,055)
3 exons
identity = 0.996
5'(1.000;1.000;0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, extr 11, cyto_nucl 10.5, nucl 5.5,
extr_plas 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023858)
HIX0023858
HIT000601967 (
ENST00000498759
)
(Zinc finger protein 678.)
genome : 227,751,236 - 227,847,582 (96,347)
query : 1 - 3,040 (3,040/3,052)
3 exons
identity = 0.998
5'(1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 24.5, cyto_mito 14.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023858)
HIX0023858
HIT000426114
(
AK307248
)
Representative transcript
(Zinc finger protein 678.)
genome : 227,751,244 - 227,865,144 (113,901)
query : 1 - 929 (929/929)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 3, cyto_nucl 2, golg 2, nucl 1.5,
cyto 1.5, E.R._mito 1.5, mito_pero 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023858)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000000166
HIX0023858
HIT000052702
(
BC042500
)
(Zinc finger protein 99;)
genome : 227,751,244 - 227,844,131 (92,888)
query : 1 - 2,525 (2,525/2,583)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023858)
HIX0023858
HIT000136406 (
ENST00000343776
)
(Zinc finger protein 99;)
genome : 227,751,244 - 227,844,131 (92,888)
query : 1 - 2,525 (2,525/2,525)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023858)
HIX0023858
HIT000480399 (
ENST00000397097
)
(Zinc finger protein 678.)
genome : 227,751,244 - 227,843,529 (92,286)
query : 1 - 1,895 (1,895/1,895)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023858)
HIX0023858
HIT000569970 (
ENST00000465266
)
(Zinc finger protein 678.)
genome : 227,751,252 - 227,838,796 (87,545)
query : 1 - 530 (530/533)
4 exons
identity = 0.989
5'(1.000;1.000;1.000;0.957)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, mito_pero 10, cyto 7, extr 3, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023858)
HIX0023858
HIT000430179
(
AK311313
)
(Zinc finger protein 678.)
genome : 227,751,261 - 227,910,352 (159,092)
query : 1 - 912 (912/912)
5 exons
identity = 0.999
5'(1.000;1.000;0.989;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 13.5, extr 4, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023858)
HIX0023858
HIT000538273 (
ENST00000440339
)
(Zinc finger protein 91.)
genome : 227,751,281 - 227,842,469 (91,189)
query : 1 - 798 (798/798)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023858)
HIX0160304
HIT000512264 (
ENST00000414330
)
(Conserved hypothetical protein.)
genome : 227,786,125 - 227,786,795 (671)
query : 1 - 671 (671/671)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160304)
HIX0214301
HIT000692460 (
ENST00000580546
)
(Non-protein coding transcript.)
genome : 227,832,981 - 227,833,067 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214301)
HIX0023858
HIT000600392 (
ENST00000497098
)
(Zinc finger protein 679.)
genome : 227,834,245 - 227,835,239 (995)
query : 1 - 219 (219/219)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13, mito 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023858)
HIX0023858
HIT000437240_02
(
DQ570709
)
(Non-protein coding transcript.)
genome : 227,842,820 - 227,842,849 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023858)
HIX0023858
HIT000328525
(
AB074269
)
(Conserved hypothetical protein.)
genome : 227,846,570 - 227,848,944 (2,375)
query : 1 - 2,374 (2,374/2,378)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023858)
HIX0023858
HIT000033120
(
BC007286
)
(Conserved hypothetical protein.)
genome : 227,848,939 - 227,850,162 (1,224)
query : 1 - 1,224 (1,224/1,257)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 10.5, mito_nucl 9.5, mito 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023858)
HIX0203535
HIT000441955_04
(
DQ575424
)
Representative transcript
(Non-protein coding transcript.)
genome : 227,870,912 - 227,870,940 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203535)
HIX0028603
HIT000510572 (
ENST00000412638
)
(Zinc finger protein 461.)
genome : 227,884,593 - 227,894,400 (9,808)
query : 1 - 1,077 (1,077/1,077)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028603)
HIX0028603
HIT000078763
(
AF387613
)
Representative transcript
(Zinc finger protein 3 isoform 2.)
genome : 227,884,733 - 227,885,408 (676)
query : 1 - 258 (258/258)
2 exons
identity = 0.988
3'(1.000;0.980)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto_nucl 3, nucl 2.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028603)
HIX0028603
HIT000659718 (
NR_036753
)
(Zinc finger protein 3 isoform 2.)
genome : 227,884,733 - 227,885,408 (676)
query : 1 - 258 (258/258)
2 exons
identity = 0.992
3'(1.000;0.984)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 4, cyto_nucl 4, nucl 2, golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028603)
HIX0028603
HIT000639780 (
ENST00000540735
)
(Zinc finger protein 567;)
genome : 227,885,250 - 227,885,408 (159)
query : 1 - 159 (159/159)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 4.5, cyto 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028603)
HIX0028603
HIT000483841 (
ENST00000400949
)
(Zinc finger protein 39; Zfp-39; CtFIN33;)
genome : 227,893,751 - 227,894,412 (662)
query : 1 - 219 (219/219)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, cyto 10, cysk 10, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028603)
HIX0213745
HIT000562662 (
NR_024485
)
(Conserved hypothetical protein.)
genome : 227,916,240 - 227,922,054 (5,815)
query : 1 - 2,376 (2,376/2,400)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 10, cyto_nucl 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213745)
HIX0213745
HIT000562663 (
NR_024486
)
(Conserved hypothetical protein.)
genome : 227,916,240 - 227,922,054 (5,815)
query : 1 - 2,213 (2,213/2,237)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 10, cyto_nucl 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213745)
HIX0213745
HIT000011880
(
AK055266
)
Representative transcript
(JmjC domain-containing protein 4 isoform 2.)
genome : 227,916,240 - 227,922,053 (5,814)
query : 1 - 2,375 (2,375/2,375)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 10, cyto_nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213745)
HIX0213745
HIT000584885 (
ENST00000480897
)
(Conserved hypothetical protein.)
genome : 227,916,240 - 227,922,053 (5,814)
query : 1 - 2,375 (2,375/2,375)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 10, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213745)
HIX0213745
HIT000018603
(
AK093736
)
(JmjC domain-containing protein 4 isoform 2.)
genome : 227,916,250 - 227,922,053 (5,804)
query : 4 - 2,205 (2,202/2,205)
2 exons
identity = 0.998
5'(0.996;0.998)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 7.5, cyto_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213745)
HIX0213745
HIT000584290 (
ENST00000480265
)
(Conserved hypothetical protein.)
genome : 227,916,250 - 227,922,053 (5,804)
query : 1 - 2,202 (2,202/2,202)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 10, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213745)
HIX0001653
HIT000010182
(
AK026908
)
(JmjC domain-containing protein 4 isoform 1.)
genome : 227,918,139 - 227,922,054 (3,916)
query : 26 - 3,737 (3,712/3,757)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001653)
HIX0001653
HIT000589596 (
ENST00000485807
)
(JmjC domain-containing protein 4 isoform 1.)
genome : 227,918,139 - 227,922,054 (3,916)
query : 25 - 3,736 (3,712/3,749)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001653)
HIX0001653
HIT000208960 (
NM_023007
)
(JmjC domain-containing protein 4 isoform 1.)
genome : 227,918,890 - 227,923,112 (4,223)
query : 1 - 2,595 (2,595/2,612)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, mito_pero 10.3333, cyto_mito 9.83333, extr 5,
pero 4.5, cyto 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001653)
HIX0001653
HIT000561965 (
NM_001161465
)
(JmjC domain-containing protein 4 isoform 2.)
genome : 227,918,890 - 227,923,112 (4,223)
query : 1 - 2,547 (2,547/2,564)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, mito_pero 10.5, pero 4.5, extr 4, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001653)
HIX0001653
HIT000348038 (
ENST00000366758
)
(JmjC domain-containing protein 4 isoform 1.)
genome : 227,918,890 - 227,923,112 (4,223)
query : 1 - 2,595 (2,595/2,595)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, mito_pero 10.3333, cyto_mito 9.83333, extr 5,
pero 4.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001653)
HIX0001653
HIT000035547
(
BC011928
)
(Conserved hypothetical protein.)
genome : 227,918,925 - 227,922,984 (4,060)
query : 1 - 2,432 (2,432/2,450)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, extr 8, mito 7, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001653)
HIX0001653
HIT000005853
(
AK022579
)
Representative transcript
(JmjC domain-containing protein 4 isoform 1.)
genome : 227,918,935 - 227,923,112 (4,178)
query : 1 - 2,550 (2,550/2,550)
6 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR003347 : JmjC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, mito_pero 10.3333, cyto_mito 9.83333, extr 5,
pero 4.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001653)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ721029
Mus
sp. (Mouse) : AK032477
Danio
sp. (Zebrafish) : BC124503
Bos
sp. (Cow) : BC153835
Tetraodon
sp. (Tetraodon) : CR687520
Equus
sp. (Horse) : ENSECAT00000022789
Macaca
sp. (Macaque) : ENSMMUT00000002630
Oryzias
sp. (Medaka) : ENSORLT00000022028
Pongo
sp. (Orangutan) : ENSPPYT00000000165
Takifugu
sp. (Fugu) : SINFRUT00000144303
Rattus
sp. (Rat) : XM_001077074
Pan
sp. (Chimpanzee) : XM_001143331
Monodelphis
sp. (Opossum) : XM_001376236
Canis
sp. (Dog) : XM_532414
HIX0001653
HIT000536830 (
ENST00000438896
)
(JmjC domain-containing protein 4 isoform 2.)
genome : 227,918,935 - 227,923,112 (4,178)
query : 1 - 2,502 (2,502/2,502)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, mito_pero 10.5, pero 4.5, extr 4, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001653)
HIX0001653
HIT000006304
(
AK023030
)
(JmjC domain-containing protein 4 isoform 1.)
genome : 227,918,935 - 227,923,090 (4,156)
query : 1 - 2,480 (2,480/2,480)
6 exons
identity = 0.997
3'(0.997;1.000;0.996;1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR003347 : JmjC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, mito_pero 11.8333, cyto_mito 10.8333,
pero 3.5, extr 3, nucl 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001653)
HIX0001653
HIT000339369
(
BC109272
)
(JmjC domain-containing protein 4 isoform 1.)
genome : 227,919,152 - 227,923,112 (3,961)
query : 1 - 2,333 (2,333/2,335)
6 exons
identity = 0.998
3'(0.998;0.993;1.000;1.000;1.000;0.995)5'
coverage = 0.999
InterPro :
IPR003347 : JmjC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, mito_pero 10.3333, cyto_mito 9.83333, extr 5,
pero 4.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001653)
HIX0213745
HIT000262416
(
BC067081
)
(Conserved hypothetical protein.)
genome : 227,919,293 - 227,922,054 (2,762)
query : 1 - 2,121 (2,121/2,146)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 10, cyto_nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213745)
HIX0001653
HIT000447261
(
DQ580730
)
(Non-protein coding transcript.)
genome : 227,919,773 - 227,919,801 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001653)
HIX0213745
HIT000242953
(
AF370397
)
(Conserved hypothetical protein.)
genome : 227,920,549 - 227,922,054 (1,506)
query : 2 - 1,503 (1,502/1,528)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213745)
HIX0001653
HIT000584596 (
ENST00000480590
)
(Conserved hypothetical protein.)
genome : 227,920,849 - 227,922,777 (1,929)
query : 1 - 891 (891/891)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, extr 8, mito 7, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001653)
HIX0001653
HIT000569956 (
ENST00000465251
)
(JmjC domain-containing protein 4 isoform 2.)
genome : 227,921,320 - 227,922,054 (735)
query : 19 - 528 (510/528)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11.5, cyto 10.5, extr 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001653)
HIX0213742
HIT000120646 (
ENST00000315781
)
(Target SNARE coiled-coil domain containing protein.)
genome : 227,922,697 - 227,963,582 (40,886)
query : 1 - 1,755 (1,755/1,755)
5 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213742)
HIX0213742
HIT000057217
(
BX648570
)
(Synaptosomal-associated protein 47.)
genome : 227,923,132 - 227,964,671 (41,540)
query : 2 - 1,868 (1,867/2,046)
4 exons
identity = 0.998
5'(1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto_nucl 3.5, cyto 3, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213742)
HIX0213742
HIT000516587 (
ENST00000418653
)
(Conserved hypothetical protein.)
genome : 227,923,132 - 227,964,671 (41,540)
query : 1 - 1,867 (1,867/1,867)
4 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto_nucl 3.5, cyto 3, nucl 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213742)
HIX0213742
HIT000011247
(
AK054633
)
Representative transcript
(Synaptosomal-associated protein 47.)
genome : 227,923,137 - 227,964,670 (41,534)
query : 1 - 2,403 (2,403/2,403)
5 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000727 : Target SNARE coiled-coil domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213742)
HIX0213742
HIT000524278 (
ENST00000426344
)
(Target SNARE coiled-coil domain containing protein.)
genome : 227,923,137 - 227,964,670 (41,534)
query : 1 - 2,403 (2,403/2,403)
5 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213742)
HIX0213742
HIT000574532 (
ENST00000470038
)
(Conserved hypothetical protein.)
genome : 227,923,874 - 227,935,816 (11,943)
query : 1 - 739 (739/739)
2 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12, cyto 7.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213742)
HIX0023551
HIT000198560 (
NM_001618
)
(Poly [ADP-ribose] polymerase 1; PARP-1; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 1; ARTD1; NAD(+) ADP-ribosyltransferase 1; ADPRT 1; Poly[ADP-ribose] synthase 1;)
genome : 226,548,392 - 226,595,801 (47,410)
query : 1 - 3,985 (3,985/4,001)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023551)
HIX0023551
HIT000384784
(
AK225654
)
Representative transcript
(Poly [ADP-ribose] polymerase 1; PARP-1; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 1; ARTD1; NAD(+) ADP-ribosyltransferase 1; ADPRT 1; Poly[ADP-ribose] synthase 1;)
genome : 226,548,392 - 226,595,766 (47,375)
query : 1 - 3,950 (3,950/3,966)
23 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.993;0.990;1.000;
1.000;1.000;0.992;1.000;1.000;1.000;0.996;
0.993;0.993;0.994;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
InterPro :
IPR001357 : BRCT domain
IPR001510 : Zinc finger, PARP-type
IPR004102 : Poly(ADP-ribose) polymerase, regulatory domain
IPR008893 : WGR domain
IPR012317 : Poly(ADP-ribose) polymerase, catalytic domain
IPR012982 : PADR1
GO :
0003677 : Molecular Function : DNA binding
0003950 : Molecular Function : NAD+ ADP-ribosyltransferase activity
0005634 : Cellular Component : nucleus
0006471 : Biological Process : protein ADP-ribosylation
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023551)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171818
Mus
sp. (Mouse) : AK169326
Rattus
sp. (Rat) : BC085765
Danio
sp. (Zebrafish) : BC100001
Bos
sp. (Cow) : D90073
Monodelphis
sp. (Opossum) : ENSMODT00000007685
Oryzias
sp. (Medaka) : ENSORLT00000017177
Pongo
sp. (Orangutan) : ENSPPYT00000000176
Tetraodon
sp. (Tetraodon) : GSTENT00030380001
Takifugu
sp. (Fugu) : SINFRUT00000181211
Gallus
sp. (Chicken) : X52690
Equus
sp. (Horse) : XM_001491457
Canis
sp. (Dog) : XM_858704
Pan
sp. (Chimpanzee) : XR_023240
HIX0023551
HIT000348074 (
ENST00000366794
)
(Poly [ADP-ribose] polymerase 1; PARP-1; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 1; ARTD1; NAD(+) ADP-ribosyltransferase 1; ADPRT 1; Poly[ADP-ribose] synthase 1;)
genome : 226,548,392 - 226,595,774 (47,383)
query : 1 - 3,958 (3,958/3,958)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023551)
HIX0023551
HIT000191159
(
J03473
)
(Poly [ADP-ribose] polymerase 1; PARP-1; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 1; ARTD1; NAD(+) ADP-ribosyltransferase 1; ADPRT 1; Poly[ADP-ribose] synthase 1;)
genome : 226,548,506 - 226,595,725 (47,220)
query : 1 - 3,795 (3,795/3,795)
23 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;0.993;1.000;1.000;0.990;1.000;1.000;
1.000;0.995)5'
coverage = 1.000
EC number :
EC 2.4.2.30
InterPro :
IPR001357 : BRCT domain
IPR001510 : Zinc finger, PARP-type
IPR004102 : Poly(ADP-ribose) polymerase, regulatory domain
IPR008893 : WGR domain
IPR012317 : Poly(ADP-ribose) polymerase, catalytic domain
IPR012982 : PADR1
GO :
0003677 : Molecular Function : DNA binding
0003950 : Molecular Function : NAD+ ADP-ribosyltransferase activity
0005634 : Cellular Component : nucleus
0006471 : Biological Process : protein ADP-ribosylation
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023551)
HIX0023551
HIT000051928
(
BC037545
)
(Poly [ADP-ribose] polymerase 1; PARP-1; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 1; ARTD1; NAD(+) ADP-ribosyltransferase 1; ADPRT 1; Poly[ADP-ribose] synthase 1;)
genome : 226,548,700 - 226,595,774 (47,075)
query : 1 - 3,650 (3,650/3,677)
23 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994;1.000;1.000;1.000;1.000;
0.994;0.996)5'
coverage = 1.000
EC number :
EC 2.4.2.30
InterPro :
IPR001357 : BRCT domain
IPR001510 : Zinc finger, PARP-type
IPR004102 : Poly(ADP-ribose) polymerase, regulatory domain
IPR008893 : WGR domain
IPR012317 : Poly(ADP-ribose) polymerase, catalytic domain
IPR012982 : PADR1
GO :
0003677 : Molecular Function : DNA binding
0003950 : Molecular Function : NAD+ ADP-ribosyltransferase activity
0005634 : Cellular Component : nucleus
0006471 : Biological Process : protein ADP-ribosylation
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023551)
HIX0023551
HIT000194617
(
M18112
)
(Poly [ADP-ribose] polymerase 1; PARP-1; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 1; ARTD1; NAD(+) ADP-ribosyltransferase 1; ADPRT 1; Poly[ADP-ribose] synthase 1;)
genome : 226,548,705 - 226,595,791 (47,087)
query : 1 - 3,640 (3,640/3,640)
23 exons
identity = 0.993
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;1.000;1.000;1.000;
0.994;0.922)5'
coverage = 1.000
EC number :
EC 2.4.2.30
InterPro :
IPR001357 : BRCT domain
IPR001510 : Zinc finger, PARP-type
IPR004102 : Poly(ADP-ribose) polymerase, regulatory domain
IPR008893 : WGR domain
IPR012317 : Poly(ADP-ribose) polymerase, catalytic domain
IPR012982 : PADR1
GO :
0003677 : Molecular Function : DNA binding
0003950 : Molecular Function : NAD+ ADP-ribosyltransferase activity
0005634 : Cellular Component : nucleus
0006471 : Biological Process : protein ADP-ribosylation
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023551)
HIX0023551
HIT000195479
(
M32721
)
(Poly [ADP-ribose] polymerase 1; PARP-1; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 1; ARTD1; NAD(+) ADP-ribosyltransferase 1; ADPRT 1; Poly[ADP-ribose] synthase 1;)
genome : 226,548,705 - 226,595,791 (47,087)
query : 1 - 3,660 (3,660/3,660)
23 exons
identity = 0.995
3'(0.994;0.983;0.984;0.992;1.000;0.990;1.000;
1.000;1.000;0.992;0.990;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;0.982)5'
coverage = 1.000
EC number :
EC 2.4.2.30
InterPro :
IPR001357 : BRCT domain
IPR001510 : Zinc finger, PARP-type
IPR004102 : Poly(ADP-ribose) polymerase, regulatory domain
IPR008893 : WGR domain
IPR012317 : Poly(ADP-ribose) polymerase, catalytic domain
IPR012982 : PADR1
GO :
0003677 : Molecular Function : DNA binding
0003950 : Molecular Function : NAD+ ADP-ribosyltransferase activity
0005634 : Cellular Component : nucleus
0006471 : Biological Process : protein ADP-ribosylation
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023551)
HIX0023551
HIT000497964
(
AK303340
)
(Poly [ADP-ribose] polymerase 1; PARP-1; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 1; ARTD1; NAD(+) ADP-ribosyltransferase 1; ADPRT 1; Poly[ADP-ribose] synthase 1;)
genome : 226,548,934 - 226,595,791 (46,858)
query : 1 - 3,370 (3,370/3,371)
23 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;0.990;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;0.994;1.000;1.000;1.000;0.977;
0.992;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
InterPro :
IPR001357 : BRCT domain
IPR001510 : Zinc finger, PARP-type
IPR004102 : Poly(ADP-ribose) polymerase, regulatory domain
IPR008893 : WGR domain
IPR012317 : Poly(ADP-ribose) polymerase, catalytic domain
IPR012982 : PADR1
GO :
0003677 : Molecular Function : DNA binding
0003950 : Molecular Function : NAD+ ADP-ribosyltransferase activity
0005634 : Cellular Component : nucleus
0006471 : Biological Process : protein ADP-ribosylation
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023551)
HIX0023551
HIT000431205
(
AK312339
)
(Poly [ADP-ribose] polymerase 1; PARP-1; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 1; ARTD1; NAD(+) ADP-ribosyltransferase 1; ADPRT 1; Poly[ADP-ribose] synthase 1;)
genome : 226,549,161 - 226,595,717 (46,557)
query : 1 - 3,132 (3,132/3,132)
23 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.995;1.000;1.000;1.000;
0.993;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
InterPro :
IPR001357 : BRCT domain
IPR001510 : Zinc finger, PARP-type
IPR004102 : Poly(ADP-ribose) polymerase, regulatory domain
IPR008893 : WGR domain
IPR012317 : Poly(ADP-ribose) polymerase, catalytic domain
IPR012982 : PADR1
GO :
0003677 : Molecular Function : DNA binding
0003950 : Molecular Function : NAD+ ADP-ribosyltransferase activity
0005634 : Cellular Component : nucleus
0006471 : Biological Process : protein ADP-ribosylation
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023551)
HIX0001650
HIT000205119 (
NM_014826
)
(Serine/threonine-protein kinase MRCK alpha; EC=2.7.11.1; CDC42-binding protein kinase alpha; DMPK-like alpha; Myotonic dystrophy kinase-related CDC42-binding kinase alpha; MRCK alpha; Myotonic dystrophy protein kinase-like alpha;)
genome : 227,177,566 - 227,505,826 (328,261)
query : 1 - 10,263 (10,263/10,284)
35 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 15
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001650)
HIX0001650
HIT000316967 (
NM_003607
)
(Serine/threonine-protein kinase MRCK alpha; EC=2.7.11.1; CDC42-binding protein kinase alpha; DMPK-like alpha; Myotonic dystrophy kinase-related CDC42-binding kinase alpha; MRCK alpha; Myotonic dystrophy protein kinase-like alpha;)
genome : 227,177,566 - 227,505,826 (328,261)
query : 1 - 10,506 (10,506/10,527)
36 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 15
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001650)
HIX0001650
HIT000348049 (
ENST00000366769
)
(Serine/threonine-protein kinase MRCK alpha; EC=2.7.11.1; CDC42-binding protein kinase alpha; DMPK-like alpha; Myotonic dystrophy kinase-related CDC42-binding kinase alpha; MRCK alpha; Myotonic dystrophy protein kinase-like alpha;)
genome : 227,177,566 - 227,506,175 (328,610)
query : 1 - 10,855 (10,855/10,855)
36 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001650)
HIX0001650
HIT000348047 (
ENST00000366767
)
(Serine/threonine-protein kinase MRCK alpha; EC=2.7.11.1; CDC42-binding protein kinase alpha; DMPK-like alpha; Myotonic dystrophy kinase-related CDC42-binding kinase alpha; MRCK alpha; Myotonic dystrophy protein kinase-like alpha;)
genome : 227,177,566 - 227,504,883 (327,318)
query : 1 - 9,320 (9,320/9,320)
35 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001650)
HIX0001650
HIT000128829 (
ENST00000334218
)
(Serine/threonine-protein kinase MRCK alpha isoform A.)
genome : 227,177,567 - 227,505,826 (328,260)
query : 1 - 10,691 (10,691/10,691)
37 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001650)
HIX0001650
HIT000348044 (
ENST00000366764
)
(Serine/threonine-protein kinase MRCK alpha isoform B.)
genome : 227,177,567 - 227,505,826 (328,260)
query : 1 - 10,421 (10,421/10,421)
35 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001650)
HIX0001650
HIT000348046 (
ENST00000366766
)
(Serine/threonine-protein kinase MRCK alpha; EC=2.7.11.1; CDC42-binding protein kinase alpha; DMPK-like alpha; Myotonic dystrophy kinase-related CDC42-binding kinase alpha; MRCK alpha; Myotonic dystrophy protein kinase-like alpha;)
genome : 227,177,567 - 227,505,826 (328,260)
query : 1 - 10,610 (10,610/10,610)
37 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001650)
HIX0001650
HIT000328903
(
AB208968
)
(Serine/threonine-protein kinase MRCK alpha; EC=2.7.11.1; CDC42-binding protein kinase alpha; DMPK-like alpha; Myotonic dystrophy kinase-related CDC42-binding kinase alpha; MRCK alpha; Myotonic dystrophy protein kinase-like alpha;)
genome : 227,180,425 - 227,505,541 (325,117)
query : 1 - 7,278 (7,278/7,278)
35 exons
identity = 1.000
3'(0.999;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR000961 : AGC-kinase, C-terminal
IPR001180 : Citron-like
IPR001849 : Pleckstrin homology domain
IPR002219 : Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR014930 : Myotonic dystrophy protein kinase, coiled coil
IPR017892 : Protein kinase, C-terminal
IPR026611 : Serine/threonine-protein kinase MRCK alpha
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005083 : Molecular Function : small GTPase regulator activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0031532 : Biological Process : actin cytoskeleton reorganization
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001650)
HIX0001650
HIT000500360
(
BC136333
)
Representative transcript
(Serine/threonine-protein kinase MRCK alpha; EC=2.7.11.1; CDC42-binding protein kinase alpha; DMPK-like alpha; Myotonic dystrophy kinase-related CDC42-binding kinase alpha; MRCK alpha; Myotonic dystrophy protein kinase-like alpha;)
genome : 227,181,938 - 227,504,910 (322,973)
query : 1 - 5,158 (5,158/5,158)
36 exons
identity = 1.000
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR000961 : AGC-kinase, C-terminal
IPR001180 : Citron-like
IPR001849 : Pleckstrin homology domain
IPR002219 : Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR014930 : Myotonic dystrophy protein kinase, coiled coil
IPR017892 : Protein kinase, C-terminal
IPR026611 : Serine/threonine-protein kinase MRCK alpha
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005083 : Molecular Function : small GTPase regulator activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0031532 : Biological Process : actin cytoskeleton reorganization
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001650)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB179174
Rattus
sp. (Rat) : AF021935
Mus
sp. (Mouse) : AK138649
Danio
sp. (Zebrafish) : BC155804
Gallus
sp. (Chicken) : CR523827
Bos
sp. (Cow) : ENSBTAT00000029173
Oryzias
sp. (Medaka) : ENSORLT00000020132
Pongo
sp. (Orangutan) : ENSPPYT00000000169
Tetraodon
sp. (Tetraodon) : GSTENT00018476001
Takifugu
sp. (Fugu) : SINFRUT00000181336
Monodelphis
sp. (Opossum) : XM_001368345
Equus
sp. (Horse) : XM_001490044
Danio
sp. (Zebrafish) : XM_691225
Canis
sp. (Dog) : XM_858531
Pan
sp. (Chimpanzee) : XR_020222
HIX0001650
HIT000634570 (
ENST00000535525
)
(Serine/threonine-protein kinase MRCK alpha; EC=2.7.11.1; CDC42-binding protein kinase alpha; DMPK-like alpha; Myotonic dystrophy kinase-related CDC42-binding kinase alpha; MRCK alpha; Myotonic dystrophy protein kinase-like alpha;)
genome : 227,181,938 - 227,504,910 (322,973)
query : 1 - 5,158 (5,158/5,158)
36 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001650)
HIX0001650
HIT000348045 (
ENST00000366765
)
(Serine/threonine-protein kinase MRCK alpha; EC=2.7.11.1; CDC42-binding protein kinase alpha; DMPK-like alpha; Myotonic dystrophy kinase-related CDC42-binding kinase alpha; MRCK alpha; Myotonic dystrophy protein kinase-like alpha;)
genome : 227,181,968 - 227,505,415 (323,448)
query : 1 - 5,732 (5,732/5,732)
37 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001650)
HIX0001650
HIT000084875
(
AY166586
)
(Serine/threonine-protein kinase MRCK alpha isoform A.)
genome : 227,181,969 - 227,504,883 (322,915)
query : 1 - 4,917 (4,917/4,917)
35 exons
identity = 0.998
3'(0.992;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;1.000;1.000;0.984;
1.000;1.000;1.000;1.000;1.000;1.000;0.994)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR000961 : AGC-kinase, C-terminal
IPR001180 : Citron-like
IPR001849 : Pleckstrin homology domain
IPR002219 : Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR014930 : Myotonic dystrophy protein kinase, coiled coil
IPR017892 : Protein kinase, C-terminal
IPR026611 : Serine/threonine-protein kinase MRCK alpha
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005083 : Molecular Function : small GTPase regulator activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0031532 : Biological Process : actin cytoskeleton reorganization
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001650)
HIX0001650
HIT000248403
(
AJ518975
)
(Serine/threonine-protein kinase MRCK alpha; EC=2.7.11.1; CDC42-binding protein kinase alpha; DMPK-like alpha; Myotonic dystrophy kinase-related CDC42-binding kinase alpha; MRCK alpha; Myotonic dystrophy protein kinase-like alpha;)
genome : 227,181,969 - 227,504,883 (322,915)
query : 1 - 5,160 (5,160/5,160)
36 exons
identity = 1.000
3'(0.992;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR000961 : AGC-kinase, C-terminal
IPR001180 : Citron-like
IPR001849 : Pleckstrin homology domain
IPR002219 : Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR014930 : Myotonic dystrophy protein kinase, coiled coil
IPR017892 : Protein kinase, C-terminal
IPR026611 : Serine/threonine-protein kinase MRCK alpha
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005083 : Molecular Function : small GTPase regulator activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0031532 : Biological Process : actin cytoskeleton reorganization
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001650)
HIX0001650
HIT000248404
(
AJ518976
)
(Serine/threonine-protein kinase MRCK alpha isoform B.)
genome : 227,181,969 - 227,504,883 (322,915)
query : 1 - 4,917 (4,917/4,917)
35 exons
identity = 1.000
3'(0.992;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR000961 : AGC-kinase, C-terminal
IPR001180 : Citron-like
IPR001849 : Pleckstrin homology domain
IPR002219 : Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR014930 : Myotonic dystrophy protein kinase, coiled coil
IPR017892 : Protein kinase, C-terminal
IPR026611 : Serine/threonine-protein kinase MRCK alpha
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005083 : Molecular Function : small GTPase regulator activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0031532 : Biological Process : actin cytoskeleton reorganization
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001650)
HIX0001650
HIT000087131
(
BC008677
)
(Serine/threonine-protein kinase MRCK alpha; EC=2.7.11.1; CDC42-binding protein kinase alpha; DMPK-like alpha; Myotonic dystrophy kinase-related CDC42-binding kinase alpha; MRCK alpha; Myotonic dystrophy protein kinase-like alpha;)
genome : 227,288,797 - 227,381,582 (92,786)
query : 1 - 1,642 (1,642/1,656)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000961 : AGC-kinase, C-terminal
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR017892 : Protein kinase, C-terminal
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 16, nucl 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001650)
HIX0023151
HIT000580148 (
ENST00000475930
)
(Conserved hypothetical protein.)
genome : 227,916,319 - 227,935,887 (19,569)
query : 1 - 792 (792/792)
3 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023151)
HIX0023151
HIT000041713
(
BC032775
)
(Synaptosomal-associated protein 47.)
genome : 227,916,359 - 227,968,927 (52,569)
query : 12 - 1,456 (1,445/1,533)
4 exons
identity = 0.999
5'(1.000)3'
coverage = 0.992
InterPro :
IPR000727 : Target SNARE coiled-coil domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 21, nucl 15.5, cyto 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023151)
HIX0023151
HIT000348040 (
ENST00000366760
)
(Target SNARE coiled-coil domain containing protein.)
genome : 227,916,358 - 227,968,927 (52,570)
query : 1 - 1,446 (1,446/1,446)
4 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 21, nucl 15.5, cyto 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023151)
HIX0023151
HIT000594963 (
ENST00000491439
)
(Conserved hypothetical protein.)
genome : 227,916,408 - 227,947,186 (30,779)
query : 1 - 734 (734/734)
3 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 16, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023151)
HIX0023151
HIT000084334
(
AY090635
)
Representative transcript
(Synaptosomal-associated protein 47; SNAP-47; Epididymis luminal protein 170; Synaptosomal-associated 47 kDa protein;)
genome : 227,922,697 - 227,968,927 (46,231)
query : 1 - 2,362 (2,362/2,401)
5 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000727 : Target SNARE coiled-coil domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023151)
HIX0023151
HIT000211610 (
NM_053052
)
(Target SNARE coiled-coil domain containing protein.)
genome : 227,922,697 - 227,968,932 (46,236)
query : 1 - 2,367 (2,367/2,388)
5 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023151)
HIX0023151
HIT000348039 (
ENST00000366759
)
(Target SNARE coiled-coil domain containing protein.)
genome : 227,922,697 - 227,968,927 (46,231)
query : 1 - 2,362 (2,362/2,362)
5 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023151)
HIX0023151
HIT000089702
(
BC018760
)
(Synaptosomal-associated protein 47; SNAP-47; Epididymis luminal protein 170; Synaptosomal-associated 47 kDa protein;)
genome : 227,922,858 - 227,968,927 (46,070)
query : 1 - 2,201 (2,201/2,220)
5 exons
identity = 0.999
5'(0.997)3'
coverage = 1.000
InterPro :
IPR000727 : Target SNARE coiled-coil domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023151)
HIX0023151
HIT000087601
(
BC011145
)
(Synaptosomal-associated protein 47.)
genome : 227,923,144 - 227,968,922 (45,779)
query : 1 - 1,910 (1,910/1,925)
5 exons
identity = 0.999
5'(1.000)3'
coverage = 0.999
InterPro :
IPR000727 : Target SNARE coiled-coil domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023151)
HIX0023151
HIT000086915
(
BC007786
)
(Synaptosomal-associated protein 47.)
genome : 227,923,154 - 227,968,927 (45,774)
query : 1 - 1,905 (1,905/1,944)
5 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000727 : Target SNARE coiled-coil domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023151)
HIX0023586
pHIT000072612 ( pHIT000072612 )
(Protein lin-9 homolog; HuLin-9; hLin-9; Beta subunit-associated regulator of apoptosis; TUDOR gene similar protein; Type I interferon receptor beta chain-associated protein; pRB-associated protein;)
genome : 226,408,083 - 226,497,576 (89,494)
query : 1 - 1,971 (1,971/1,971)
16 exons
InterPro :
IPR010561 : Protein LIN-9/Protein ALWAYS EARLY
GO :
0006351 : Biological Process : transcription, DNA-templated
0007049 : Biological Process : cell cycle
0017053 : Cellular Component : transcriptional repressor complex
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023586)
CAGE tag :
H05BE72O0603,H09BA46O0711,H21BA84F0111
H21BA96G0409,H21BA99B0601
HIX0023586
pHIT000003503 ( pHIT000003503 )
(Protein lin-9 homolog; HuLin-9; hLin-9; Beta subunit-associated regulator of apoptosis; TUDOR gene similar protein; Type I interferon receptor beta chain-associated protein; pRB-associated protein;)
genome : 226,420,202 - 226,497,576 (77,375)
query : 1 - 1,848 (1,848/1,848)
15 exons
InterPro :
IPR010561 : Protein LIN-9/Protein ALWAYS EARLY
GO :
0006351 : Biological Process : transcription, DNA-templated
0007049 : Biological Process : cell cycle
0017053 : Cellular Component : transcriptional repressor complex
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023586)
CAGE tag :
H21BA07F0103,H22BA05I2313,H22BA31H2112
H22BA47E2207,H22BA64C0613
AL592045.28
226329917-226414785 F +
NCBI
BX284931.11
226414786-226486682 F +
NCBI
AL359742.15
226486683-226572878 F +
NCBI
AL359704.9
226572879-226742379 F -
NCBI
AL357122.13
226742380-226796036 F +
NCBI
AL365444.11
226796037-226973190 F -
NCBI
AL359732.12
226973191-227066616 F +
NCBI
AL391628.18
227066617-227127516 F -
NCBI
AL353689.26
227127517-227321344 F +
NCBI
AL451047.7
227321345-227396398 F +
NCBI
AL627308.20
227396399-227518555 F +
NCBI
AL606462.5
227518556-227628956 F +
NCBI
AL451054.22
227628957-227774523 F +
NCBI
AL592310.6
227774524-227883663 F +
NCBI
AL136378.14
227883664-227929916 F +
NCBI