bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0001648
HIT000046339
(
AK126466
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,085,237 - 227,175,246 (90,010)
query : 1 - 5,524 (5,524/5,524)
20 exons
identity = 0.998
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
InterPro :
IPR004147 : UbiB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 6.5, cyto_pero 5.5, extr 4, pero 3.5,
nucl 2, extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000348059 (
ENST00000366779
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,085,237 - 227,175,246 (90,010)
query : 1 - 5,523 (5,523/5,523)
20 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 6.5, cyto_pero 5.5, extr 4, pero 3.5,
nucl 2, extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000390003
(
BC129930
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,087,135 - 227,171,556 (84,422)
query : 20 - 2,271 (2,252/2,288)
16 exons
identity = 0.996
5'(1.000)3'
coverage = 0.984
EC number :
EC 2.7.11.-
InterPro :
IPR004147 : UbiB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 6.5, cyto_nucl 6, extr 5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000207832 (
NM_020247
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,938 - 227,175,246 (47,309)
query : 1 - 2,924 (2,924/2,932)
15 exons
identity = 1.000
5'(1.000)3'
coverage = 0.997
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 6.5, cyto_pero 5.5, extr 4, pero 3.5,
nucl 2, extr_plas 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000057507
(
BX648860
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,987 - 227,175,245 (47,259)
query : 2 - 2,745 (2,744/2,760)
15 exons
identity = 0.999
5'(1.000)3'
coverage = 0.999
EC number :
EC 2.7.11.-
InterPro :
IPR004147 : UbiB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.8333, nucl 12.5, cyto 12,
cyto_golg 7.83333, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000348058 (
ENST00000366778
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,987 - 227,175,245 (47,259)
query : 1 - 2,743 (2,743/2,743)
15 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.8333, nucl 12.5, cyto 12,
cyto_golg 7.83333, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000032262
(
BC005171
)
Representative transcript
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,989 - 227,175,244 (47,256)
query : 1 - 2,871 (2,871/2,913)
15 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
InterPro :
IPR004147 : UbiB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 6.5, cyto_pero 5.5, extr 4, pero 3.5,
nucl 2, extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK014605
Danio
sp. (Zebrafish) : BC076083
Rattus
sp. (Rat) : BC091388
Bos
sp. (Cow) : BC114164
Tetraodon
sp. (Tetraodon) : CR678242
Monodelphis
sp. (Opossum) : ENSMODT00000036706
Oryzias
sp. (Medaka) : ENSORLT00000021446
Pongo
sp. (Orangutan) : ENSPPYT00000000170
Takifugu
sp. (Fugu) : SINFRUT00000143815
Macaca
sp. (Macaque) : XM_001089241
Equus
sp. (Horse) : XM_001491544
Gallus
sp. (Chicken) : XM_415040
Pan
sp. (Chimpanzee) : XM_514248
Canis
sp. (Dog) : XM_537230
Danio
sp. (Zebrafish) : XM_693745
HIX0001648
HIT000348057 (
ENST00000366777
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,989 - 227,175,245 (47,257)
query : 1 - 2,872 (2,872/2,872)
15 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 6.5, cyto_pero 5.5, extr 4, pero 3.5,
nucl 2, extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000017651
(
AK092784
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,995 - 227,175,246 (47,252)
query : 4 - 2,647 (2,644/2,647)
15 exons
identity = 0.999
5'(1.000)3'
coverage = 0.999
EC number :
EC 2.7.11.-
InterPro :
IPR004147 : UbiB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14, cyto 9.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000348056 (
ENST00000366776
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,995 - 227,175,246 (47,252)
query : 1 - 2,642 (2,642/2,642)
15 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 8, mito_nucl 8, cyto_pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000046073
(
AK126200
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,995 - 227,175,244 (47,250)
query : 1 - 3,611 (3,611/3,611)
8 exons
identity = 0.998
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 10.5, cyto_nucl 8.5, pero 4, nucl 3.5,
mito_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000582514 (
ENST00000478406
)
(Uncharacterized aarF domain-containing protein kinase 4; EC=2.7.11.-;)
genome : 227,127,995 - 227,175,244 (47,250)
query : 1 - 3,612 (3,612/3,612)
8 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, cyto_nucl 9, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000081728
(
AK074693
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,995 - 227,175,239 (47,245)
query : 1 - 2,860 (2,860/2,860)
15 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
InterPro :
IPR004147 : UbiB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 7.5, cyto_pero 6, extr 4, pero 3.5,
nucl 2, lyso 2, extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000492359
(
AK297735
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,995 - 227,175,050 (47,056)
query : 1 - 2,007 (2,007/2,007)
12 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
InterPro :
IPR004147 : UbiB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 6.5, cyto_pero 6.33333,
cyto_nucl 6.16667, nucl 4.5, pero 4, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000556441 (
ENST00000458507
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,995 - 227,175,050 (47,056)
query : 1 - 2,007 (2,007/2,007)
12 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 6.5, cyto_pero 6.33333,
cyto_nucl 5.66667, pero 4, nucl 3.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000488195
(
AK293571
)
(Uncharacterized aarF domain-containing protein kinase 4; EC=2.7.11.-;)
genome : 227,127,995 - 227,174,678 (46,684)
query : 1 - 1,719 (1,719/1,719)
12 exons
identity = 0.995
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, cyto_nucl 18, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000015361
(
AK090494
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,999 - 227,175,245 (47,247)
query : 1 - 2,660 (2,660/2,660)
15 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
InterPro :
IPR004147 : UbiB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 15, nucl 4, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000348055 (
ENST00000366775
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,999 - 227,175,245 (47,247)
query : 1 - 2,660 (2,660/2,660)
15 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 15, nucl 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000495636
(
AK301012
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,127,999 - 227,174,738 (46,740)
query : 1 - 2,337 (2,337/2,337)
17 exons
identity = 0.996
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
InterPro :
IPR004147 : UbiB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12.3333, cyto_pero 8.66667,
nucl 7, extr 4, mito 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000061229
(
AB073905
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,128,015 - 227,175,244 (47,230)
query : 1 - 2,847 (2,847/2,870)
15 exons
identity = 0.998
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
InterPro :
IPR004147 : UbiB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 6.5, cyto_pero 5.5, extr 4, pero 3.5,
nucl 2, extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
HIX0001648
HIT000592661 (
ENST00000489044
)
(Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;)
genome : 227,128,080 - 227,165,224 (37,145)
query : 1 - 941 (941/941)
5 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, mito 10, cyto_nucl 7.5, extr 6, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001648)
AL391628.18
227121917-227127516 F -
NCBI
AL353689.26
227127517-227137916 F +
NCBI
L1M4b
L2
Charlie7
AluYf4
Charlie7
AluY
LTR73
L1MC5
MER4C
Charlie18a
AluSx1
MER20
L1ME1
GA-rich
(GA)n
MIR3
MIRb
AluJb
L2a
MLT1D
MIRb
MIRb