bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0160367
HIT000514404 (
ENST00000416470
)
(Non-protein coding transcript.)
genome : 19,918,296 - 19,923,326 (5,031)
query : 1 - 207 (207/207)
2 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160367)
HIX0199902
HIT000366065 (
NM_001032363
)
(Mitochondrial inner membrane organizing system protein 1;)
genome : 19,923,471 - 19,956,315 (32,845)
query : 1 - 3,726 (3,726/3,726)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 11.5, extr 7, cyto_nucl 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199902)
HIX0199902
HIT000656944 (
NM_001204082
)
(Mitochondrial inner membrane organizing system protein 1;)
genome : 19,923,471 - 19,956,315 (32,845)
query : 1 - 3,678 (3,678/3,678)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 9.5, extr_plas 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199902)
HIX0199902
HIT000656945 (
NM_001204083
)
(Mitochondrial inner membrane organizing system protein 1 isoform c.)
genome : 19,923,471 - 19,956,315 (32,845)
query : 1 - 3,967 (3,967/3,967)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, extr 9, cyto 7, nucl 5, E.R._mito 5,
mito_pero 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199902)
HIX0199902
HIT000658939 (
NR_033757
)
(Mitochondrial inner membrane organizing system protein 1 isoform a.)
genome : 19,923,471 - 19,956,315 (32,845)
query : 1 - 3,911 (3,911/3,911)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 6, mito 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199902)
HIX0199902
HIT000658940 (
NR_033758
)
(Mitochondrial inner membrane organizing system protein 1 isoform a.)
genome : 19,923,471 - 19,956,315 (32,845)
query : 1 - 3,805 (3,805/3,805)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 7.5, cyto_nucl 7, nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199902)
HIX0199902
HIT000590621 (
ENST00000486890
)
(Mitochondrial inner membrane organizing system protein 1 isoform a.)
genome : 19,923,477 - 19,950,284 (26,808)
query : 1 - 677 (677/677)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 4.5, cyto_nucl 4.5, nucl 3.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199902)
HIX0199902
HIT000123257 (
ENST00000322753
)
(Mitochondrial inner membrane organizing system protein 1;)
genome : 19,923,484 - 19,956,314 (32,831)
query : 1 - 3,712 (3,712/3,712)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 11.5, extr 7, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199902)
HIX0199902
HIT000264343
(
BC070388
)
(Mitochondrial inner membrane organizing system protein 1;)
genome : 19,923,484 - 19,953,128 (29,645)
query : 1 - 526 (526/555)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR007512 : Protein of unknown function DUF543
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 11.5, extr 7, cyto_nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199902)
HIX0199902
HIT000601306 (
ENST00000498067
)
(Mitochondrial inner membrane organizing system protein 1 isoform b.)
genome : 19,923,485 - 19,924,689 (1,205)
query : 1 - 481 (481/481)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 6.5, mito 5, cyto_nucl 5, nucl 2.5,
E.R._mito 2.5, mito_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199902)
HIX0199902
HIT000567471 (
ENST00000462646
)
(Mitochondrial inner membrane organizing system protein 1 isoform b.)
genome : 19,923,489 - 19,950,045 (26,557)
query : 1 - 335 (335/335)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8, cyto 8, cyto_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199902)
HIX0199902
HIT000019173
(
AK094318
)
Representative transcript
(Mitochondrial inner membrane organizing system protein 1;)
genome : 19,923,494 - 19,955,174 (31,681)
query : 1 - 2,283 (2,283/2,283)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999;1.000)3'
coverage = 1.000
InterPro :
IPR007512 : Protein of unknown function DUF543
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 11.5, extr 7, cyto_nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199902)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK030343
Danio
sp. (Zebrafish) : BC122354
Gallus
sp. (Chicken) : BX929644
Tetraodon
sp. (Tetraodon) : CR706694
Equus
sp. (Horse) : ENSECAT00000007321
Monodelphis
sp. (Opossum) : ENSMODT00000033865
Oryzias
sp. (Medaka) : ENSORLT00000000177
Pongo
sp. (Orangutan) : ENSPPYT00000002133
Rattus
sp. (Rat) : XM_001071412
Macaca
sp. (Macaque) : XM_001107229
Pan
sp. (Chimpanzee) : XM_001159311
Canis
sp. (Dog) : XM_861754
Bos
sp. (Cow) : XM_865520
HIX0199902
HIT000087408
(
BC009927
)
(Mitochondrial inner membrane organizing system protein 1 isoform a.)
genome : 19,923,495 - 19,953,113 (29,619)
query : 1 - 579 (579/609)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007512 : Protein of unknown function DUF543
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 7.5, cyto_nucl 7, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199902)
HIX0199902
HIT000571651 (
ENST00000467029
)
(Mitochondrial inner membrane organizing system protein 1 isoform a.)
genome : 19,923,495 - 19,953,117 (29,623)
query : 1 - 583 (583/583)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 7.5, cyto_nucl 7, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199902)
HIX0199902
HIT000585434 (
ENST00000481464
)
(Mitochondrial inner membrane organizing system protein 1 isoform a.)
genome : 19,923,533 - 19,953,123 (29,591)
query : 1 - 657 (657/657)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 6, mito 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199902)
HIX0199902
HIT000601855 (
ENST00000498642
)
(Mitochondrial inner membrane organizing system protein 1 isoform c.)
genome : 19,923,535 - 19,953,081 (29,547)
query : 1 - 669 (669/669)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, extr 9, cyto 7, nucl 5, E.R._mito 5,
mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199902)
HIX0199902
HIT000583693 (
ENST00000479642
)
(Conserved hypothetical protein.)
genome : 19,923,546 - 19,927,798 (4,253)
query : 1 - 576 (576/576)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 11, cyto_nucl 5, nucl 4.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199902)
HIX0199902
HIT000589169 (
ENST00000485362
)
(Mitochondrial inner membrane organizing system protein 1 isoform a.)
genome : 19,923,564 - 19,953,100 (29,537)
query : 1 - 438 (438/438)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, mito 11, cyto_nucl 8, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199902)
HIX0200046
HIT000264921
(
BC072682
)
Representative transcript
(40S ribosomal protein S14;)
genome : 19,934,302 - 19,935,137 (836)
query : 2 - 837 (836/909)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.999
InterPro :
IPR001971 : Ribosomal protein S11
IPR018102 : Ribosomal S11, conserved site
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 10.5, extr 7, mito 3, nucl 2.5,
mito_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200046)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC059561
Monodelphis
sp. (Opossum) : ENSMODT00000012078
Takifugu
sp. (Fugu) : SINFRUT00000136361
Pan
sp. (Chimpanzee) : XM_001159510
Bos
sp. (Cow) : XM_584177
Macaca
sp. (Macaque) : XR_011310
Mus
sp. (Mouse) : XR_031236
HIX0200046
HIT000727755 (
NR_077246
)
(40S ribosomal protein S14;)
genome : 19,934,301 - 19,935,137 (837)
query : 1 - 837 (837/853)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 10.5, extr 7, mito 3, nucl 2.5,
mito_pero 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200046)
HIX0200046
HIT000101181_03
(
D28352
)
(Non-protein coding transcript.)
genome : 19,934,574 - 19,934,613 (40)
query : 4 - 43 (40/43)
1 exon
identity = 0.975
5'(0.975)3'
coverage = 0.930
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200046)
HIX0200046
HIT000555197 (
ENST00000457263
)
(40S ribosomal protein S14;)
genome : 19,934,608 - 19,935,062 (455)
query : 1 - 455 (455/455)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200046)
HIX0199902
HIT000021095
(
AK096240
)
(Conserved hypothetical protein.)
genome : 19,954,285 - 19,956,315 (2,031)
query : 1 - 1,963 (1,963/1,963)
2 exons
identity = 0.990
5'(0.980;0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199902)
HIX0000205
HIT000526909 (
ENST00000428975
)
(C1orf151-NBL1 read-through protein isoform b precursor.)
genome : 19,967,048 - 19,983,427 (16,380)
query : 1 - 546 (546/546)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000205)
HIX0000205
HIT000318775 (
NM_182744
)
(Neuroblastoma suppressor of tumorigenicity 1; DAN domain family member 1; Protein N03; Zinc finger protein DAN; Precursor;)
genome : 19,969,723 - 19,984,949 (15,227)
query : 1 - 2,061 (2,061/2,079)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 11, plas 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000205)
HIX0000205
HIT000725489 (
NM_001278164
)
(Neuroblastoma suppressor of tumorigenicity 1; DAN domain family member 1; Protein N03; Zinc finger protein DAN; Precursor;)
genome : 19,969,723 - 19,984,949 (15,227)
query : 1 - 2,042 (2,042/2,060)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000205)
HIX0000205
HIT000495496
(
AK300872
)
Representative transcript
(Neuroblastoma suppressor of tumorigenicity 1; DAN domain family member 1; Protein N03; Zinc finger protein DAN; Precursor;)
genome : 19,969,723 - 19,983,863 (14,141)
query : 1 - 975 (975/975)
4 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004133 : DAN
IPR006207 : Cystine knot, C-terminal
IPR016728 : Neuroblastoma suppressor of tumourigenicity 1
IPR029034 : Cystine-knot cytokine
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 11, plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000205)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AB044337
Mus
sp. (Mouse) : AK158008
Tetraodon
sp. (Tetraodon) : CR688001
Equus
sp. (Horse) : ENSECAT00000007321
Oryzias
sp. (Medaka) : ENSORLT00000000176
Pongo
sp. (Orangutan) : ENSPPYT00000002132
Rattus
sp. (Rat) : S72637
Takifugu
sp. (Fugu) : SINFRUT00000136878
Macaca
sp. (Macaque) : XM_001093104
Canis
sp. (Dog) : XM_544529
Bos
sp. (Cow) : XM_615319
HIX0000205
HIT000113168 (
ENST00000289749
)
(Neuroblastoma suppressor of tumorigenicity 1; DAN domain family member 1; Protein N03; Zinc finger protein DAN; Precursor;)
genome : 19,969,726 - 19,983,622 (13,897)
query : 1 - 731 (731/731)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 11, plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000205)
HIX0000205
HIT000725490 (
NM_001278165
)
(Neuroblastoma suppressor of tumorigenicity 1; DAN domain family member 1; Protein N03; Zinc finger protein DAN; Precursor;)
genome : 19,969,903 - 19,984,949 (15,047)
query : 1 - 2,109 (2,109/2,127)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000205)
HIX0000205
HIT000549692 (
ENST00000451758
)
(C1orf151-NBL1 read-through protein isoform b precursor.)
genome : 19,969,903 - 19,983,462 (13,560)
query : 1 - 622 (622/622)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000205)
HIX0000205
HIT000656946 (
NM_001204084
)
(Neuroblastoma suppressor of tumorigenicity 1; DAN domain family member 1; Protein N03; Zinc finger protein DAN; Precursor;)
genome : 19,970,208 - 19,984,949 (14,742)
query : 1 - 2,133 (2,133/2,151)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000205)
HIX0000205
HIT000537598 (
ENST00000439664
)
(C1orf151-NBL1 read-through protein isoform b precursor.)
genome : 19,970,208 - 19,983,404 (13,197)
query : 1 - 588 (588/588)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000205)
HIX0000205
HIT000424898
(
AK292101
)
(Neuroblastoma suppressor of tumorigenicity 1; DAN domain family member 1; Protein N03; Zinc finger protein DAN; Precursor;)
genome : 19,970,249 - 19,983,909 (13,661)
query : 1 - 1,053 (1,053/1,053)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR004133 : DAN
IPR006207 : Cystine knot, C-terminal
IPR016728 : Neuroblastoma suppressor of tumourigenicity 1
IPR029034 : Cystine-knot cytokine
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000205)
HIX0000205
HIT000356416 (
ENST00000375136
)
(Neuroblastoma suppressor of tumorigenicity 1; DAN domain family member 1; Protein N03; Zinc finger protein DAN; Precursor;)
genome : 19,970,657 - 19,984,945 (14,289)
query : 1 - 2,172 (2,172/2,172)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000205)
HIX0000205
HIT000202075 (
NM_005380
)
(Neuroblastoma suppressor of tumorigenicity 1; DAN domain family member 1; Protein N03; Zinc finger protein DAN; Precursor;)
genome : 19,970,667 - 19,984,949 (14,283)
query : 1 - 2,166 (2,166/2,184)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000205)
HIX0000205
HIT000662759 (
ENST00000548815
)
(Neuroblastoma suppressor of tumorigenicity 1; DAN domain family member 1; Protein N03; Zinc finger protein DAN; Precursor;)
genome : 19,970,808 - 19,984,945 (14,138)
query : 1 - 2,021 (2,021/2,021)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000205)
HIX0000205
HIT000035613
(
BC012037
)
(Neuroblastoma suppressor of tumorigenicity 1; DAN domain family member 1; Protein N03; Zinc finger protein DAN; Precursor;)
genome : 19,970,871 - 19,984,945 (14,075)
query : 1 - 1,961 (1,961/2,003)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.997)3'
coverage = 0.999
InterPro :
IPR004133 : DAN
IPR006207 : Cystine knot, C-terminal
IPR016728 : Neuroblastoma suppressor of tumourigenicity 1
IPR029034 : Cystine-knot cytokine
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000205)
HIX0000205
HIT000101168
(
D28124
)
(Neuroblastoma suppressor of tumorigenicity 1; DAN domain family member 1; Protein N03; Zinc finger protein DAN; Precursor;)
genome : 19,970,901 - 19,984,939 (14,039)
query : 1 - 1,923 (1,923/1,929)
4 exons
identity = 0.997
5'(0.975;1.000;1.000;0.997)3'
coverage = 0.997
InterPro :
IPR004133 : DAN
IPR006207 : Cystine knot, C-terminal
IPR016728 : Neuroblastoma suppressor of tumourigenicity 1
IPR029034 : Cystine-knot cytokine
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000205)
HIX0000205
HIT000656947 (
NM_001204085
)
(Neuroblastoma suppressor of tumorigenicity 1; DAN domain family member 1; Protein N03; Zinc finger protein DAN; Precursor;)
genome : 19,971,866 - 19,984,949 (13,084)
query : 1 - 2,051 (2,051/2,069)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000205)
HIX0000205
HIT000432131
(
AK313265
)
(Neuroblastoma suppressor of tumorigenicity 1; DAN domain family member 1; Protein N03; Zinc finger protein DAN; Precursor;)
genome : 19,971,866 - 19,983,622 (11,757)
query : 1 - 724 (724/724)
4 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004133 : DAN
IPR006207 : Cystine knot, C-terminal
IPR016728 : Neuroblastoma suppressor of tumourigenicity 1
IPR029034 : Cystine-knot cytokine
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000205)
HIX0000205
HIT000523334 (
ENST00000425400
)
(C1orf151-NBL1 read-through protein isoform b precursor.)
genome : 19,971,866 - 19,983,426 (11,561)
query : 1 - 528 (528/528)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000205)
HIX0000205
HIT000656948 (
NM_001204086
)
(Neuroblastoma suppressor of tumorigenicity 1; DAN domain family member 1; Protein N03; Zinc finger protein DAN; Precursor;)
genome : 19,972,260 - 19,984,949 (12,690)
query : 1 - 2,160 (2,160/2,178)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26.5, extr_plas 14.5, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000205)
HIX0000205
HIT000428123
(
AK309257
)
(Neuroblastoma suppressor of tumorigenicity 1; DAN domain family member 1; Protein N03; Zinc finger protein DAN; Precursor;)
genome : 19,972,260 - 19,984,037 (11,778)
query : 1 - 1,249 (1,249/1,249)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR004133 : DAN
IPR006207 : Cystine knot, C-terminal
IPR016728 : Neuroblastoma suppressor of tumourigenicity 1
IPR029034 : Cystine-knot cytokine
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26.5, extr_plas 14.5, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000205)
HIX0000205
HIT000537212 (
ENST00000439278
)
(C1orf151-NBL1 read-through protein isoform b precursor.)
genome : 19,972,260 - 19,981,929 (9,670)
query : 1 - 570 (570/570)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23.5, extr_plas 14, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000205)
HIX0000205
HIT000725491 (
NM_001278166
)
(Neuroblastoma suppressor of tumorigenicity 1; DAN domain family member 1; Protein N03; Zinc finger protein DAN; Precursor;)
genome : 19,974,104 - 19,984,949 (10,846)
query : 1 - 1,953 (1,953/1,971)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000205)
HIX0000205
HIT000525828 (
ENST00000427894
)
(C1orf151-NBL1 read-through protein isoform b precursor.)
genome : 19,974,104 - 19,983,569 (9,466)
query : 1 - 573 (573/573)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000205)
HIX0000205
HIT000083847
(
AY049783
)
(Neuroblastoma suppressor of tumorigenicity 1; DAN domain family member 1; Protein N03; Zinc finger protein DAN; Precursor;)
genome : 19,981,507 - 19,983,647 (2,141)
query : 1 - 588 (588/588)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004133 : DAN
IPR006207 : Cystine knot, C-terminal
IPR016728 : Neuroblastoma suppressor of tumourigenicity 1
IPR029034 : Cystine-knot cytokine
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000205)
HIX0000205
HIT000266488
(
BT019423
)
(Neuroblastoma suppressor of tumorigenicity 1; DAN domain family member 1; Protein N03; Zinc finger protein DAN; Precursor;)
genome : 19,981,527 - 19,983,620 (2,094)
query : 1 - 541 (541/543)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.996
InterPro :
IPR004133 : DAN
IPR006207 : Cystine knot, C-terminal
IPR016728 : Neuroblastoma suppressor of tumourigenicity 1
IPR029034 : Cystine-knot cytokine
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000205)
HIX0200015
HIT000113169 (
ENST00000289753
)
(5-hydroxytryptamine receptor 6; 5-HT-6; 5-HT6; Serotonin receptor 6;)
genome : 19,991,780 - 20,006,055 (14,276)
query : 1 - 1,984 (1,984/1,984)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200015)
HIX0200015
HIT000193751
(
L41147
)
Representative transcript
(5-hydroxytryptamine receptor 6; 5-HT-6; 5-HT6; Serotonin receptor 6;)
genome : 19,991,780 - 20,006,055 (14,276)
query : 1 - 1,984 (1,984/1,984)
3 exons
identity = 0.999
5'(0.999;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002232 : 5-Hydroxytryptamine 6 receptor
GO :
0004993 : Molecular Function : serotonin receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200015)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF134158
Pan
sp. (Chimpanzee) : AY665263
Danio
sp. (Zebrafish) : ENSDART00000077067
Equus
sp. (Horse) : ENSECAT00000005139
Gallus
sp. (Chicken) : ENSGALT00000006468
Oryzias
sp. (Medaka) : ENSORLT00000000923
Pongo
sp. (Orangutan) : ENSPPYT00000002130
Tetraodon
sp. (Tetraodon) : GSTENT00020559001
Rattus
sp. (Rat) : L19656
Takifugu
sp. (Fugu) : SINFRUT00000139170
Monodelphis
sp. (Opossum) : XM_001378332
Canis
sp. (Dog) : XM_544528
Bos
sp. (Cow) : XM_589622
HIX0200015
HIT000197881 (
NM_000871
)
(5-hydroxytryptamine receptor 6; 5-HT-6; 5-HT6; Serotonin receptor 6;)
genome : 19,991,780 - 20,006,055 (14,276)
query : 1 - 1,984 (1,984/1,984)
3 exons
identity = 0.999
5'(0.999;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200015)
HIX0200015
HIT000265502
(
BC074995
)
(5-hydroxytryptamine receptor 6; 5-HT-6; 5-HT6; Serotonin receptor 6;)
genome : 19,992,213 - 20,005,905 (13,693)
query : 1 - 1,401 (1,401/1,401)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002232 : 5-Hydroxytryptamine 6 receptor
GO :
0004993 : Molecular Function : serotonin receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200015)
HIX0200015
HIT000265503
(
BC074996
)
(5-hydroxytryptamine receptor 6; 5-HT-6; 5-HT6; Serotonin receptor 6;)
genome : 19,992,213 - 20,005,905 (13,693)
query : 1 - 1,401 (1,401/1,401)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002232 : 5-Hydroxytryptamine 6 receptor
GO :
0004993 : Molecular Function : serotonin receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200015)
HIX0200015
HIT000254593
(
AY429105
)
(5-hydroxytryptamine receptor 6; 5-HT-6; 5-HT6; Serotonin receptor 6;)
genome : 19,992,247 - 20,005,861 (13,615)
query : 1 - 1,323 (1,323/1,323)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002232 : 5-Hydroxytryptamine 6 receptor
GO :
0004993 : Molecular Function : serotonin receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200015)
HIX0200015
pHIT000097310 ( pHIT000097310 )
(5-hydroxytryptamine receptor 6; 5-HT-6; 5-HT6; Serotonin receptor 6;)
genome : 19,992,496 - 20,005,861 (13,366)
query : 1 - 1,074 (1,074/1,074)
3 exons
InterPro :
IPR002232 : 5-Hydroxytryptamine 6 receptor
GO :
0004993 : Molecular Function : serotonin receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200015)
CAGE tag :
T01R01308A6D
HIX0200015
HIT000327445
(
Z49119
)
(5-hydroxytryptamine receptor 6; 5-HT-6; 5-HT6; Serotonin receptor 6;)
genome : 19,992,888 - 20,005,184 (12,297)
query : 1 - 198 (198/198)
2 exons
identity = 0.995
5'(1.000;0.992)3'
coverage = 1.000
InterPro :
IPR002232 : 5-Hydroxytryptamine 6 receptor
GO :
0004993 : Molecular Function : serotonin receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16.5, mito 14, extr_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200015)
HIX0200015
HIT000329064
(
AB209129
)
(5-hydroxytryptamine receptor 6; 5-HT-6; 5-HT6; Serotonin receptor 6;)
genome : 19,999,417 - 20,005,829 (6,413)
query : 1 - 6,410 (6,410/6,410)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
InterPro :
IPR002232 : 5-Hydroxytryptamine 6 receptor
GO :
0004993 : Molecular Function : serotonin receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 3, cyto 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200015)
HIX0200015
HIT000061874
(
AF007141
)
(Conserved hypothetical protein.)
genome : 20,005,863 - 20,007,459 (1,597)
query : 1 - 1,597 (1,597/1,636)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto_nucl 10, nucl 8.5, cyto 8.5, mito 5,
extr_plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200015)
HIX0000206
HIT000027302
(
AL832390
)
(Transmembrane and coiled-coil domain-containing protein 4.)
genome : 20,008,734 - 20,027,380 (18,647)
query : 16 - 1,457 (1,442/1,590)
3 exons
identity = 0.999
3'(0.998;1.000;1.000)5'
coverage = 0.990
InterPro :
IPR007941 : Protein of unknown function DUF726
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 5, nucl 4, cyto_mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000206)
HIX0000206
HIT000318458 (
NM_181719
)
(Transmembrane and coiled-coil domain-containing protein 4;)
genome : 20,008,706 - 20,126,410 (117,705)
query : 1 - 2,974 (2,974/2,989)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 10, cyto 6, plas 5, pero 3.5, mito_pero 3.5,
mito 2.5, extr_plas 2.5, cysk_plas 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000206)
HIX0000206
HIT000053935
(
BC053600
)
(Transmembrane and coiled-coil domain-containing protein 4;)
genome : 20,008,729 - 20,113,611 (104,883)
query : 1 - 2,810 (2,810/2,843)
14 exons
identity = 0.999
3'(0.999;0.983;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007941 : Protein of unknown function DUF726
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 10, cyto 6, plas 5, pero 3.5, mito_pero 3.5,
mito 2.5, extr_plas 2.5, cysk_plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000206)
HIX0000206
HIT000113881 (
ENST00000294543
)
(Transmembrane and coiled-coil domain-containing protein 4;)
genome : 20,008,706 - 20,126,410 (117,705)
query : 1 - 2,974 (2,974/2,974)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 10, cyto 6, plas 5, pero 3.5, mito_pero 3.5,
mito 2.5, extr_plas 2.5, cysk_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000206)
HIX0000206
HIT000055531
(
BX640987
)
Representative transcript
(Transmembrane and coiled-coil domain-containing protein 4;)
genome : 20,008,734 - 20,126,410 (117,677)
query : 2 - 2,947 (2,946/2,965)
16 exons
identity = 0.999
3'(0.998;0.983;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007941 : Protein of unknown function DUF726
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 10, cyto 6, plas 5, pero 3.5, mito_pero 3.5,
mito 2.5, extr_plas 2.5, cysk_plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000206)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK029092
Equus
sp. (Horse) : ENSECAT00000022327
Oryzias
sp. (Medaka) : ENSORLT00000000928
Pongo
sp. (Orangutan) : ENSPPYT00000002129
Rattus
sp. (Rat) : ENSRNOT00000023431
Tetraodon
sp. (Tetraodon) : GSTENT00020557001
Takifugu
sp. (Fugu) : SINFRUT00000139172
Macaca
sp. (Macaque) : XM_001094119
Pan
sp. (Chimpanzee) : XM_001159885
Monodelphis
sp. (Opossum) : XM_001377806
Gallus
sp. (Chicken) : XM_417632
Canis
sp. (Dog) : XM_544527
Danio
sp. (Zebrafish) : XM_691648
Bos
sp. (Cow) : XR_028315
HIX0000206
HIT000356407 (
ENST00000375127
)
(Transmembrane and coiled-coil domain-containing protein 4.)
genome : 20,008,733 - 20,125,837 (117,105)
query : 1 - 2,403 (2,403/2,403)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 9.5, cyto_nucl 9, cyto 7.5, plas 5, pero 3.5,
mito_pero 3.5, mito 2.5, extr_plas 2.5, cysk_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000206)
HIX0000206
HIT000047416
(
AK127543
)
(Transmembrane and coiled-coil domain-containing protein 4.)
genome : 20,008,735 - 20,064,912 (56,178)
query : 1 - 1,722 (1,722/1,722)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.995)5'
coverage = 1.000
InterPro :
IPR007941 : Protein of unknown function DUF726
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, cyto 11, nucl 9.5, cyto_pero 9.5,
extr 6, pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000206)
HIX0000206
HIT000593405 (
ENST00000489814
)
(Transmembrane and coiled-coil domain-containing protein 4.)
genome : 20,008,735 - 20,064,912 (56,178)
query : 1 - 1,722 (1,722/1,722)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.8333, cyto 11.5, cyto_pero 8.33333,
nucl 8, extr 7, pero 3.5, extr_plas 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000206)
HIX0000206
HIT000356402 (
ENST00000375122
)
(Transmembrane and coiled-coil domain-containing protein 4;)
genome : 20,008,754 - 20,126,410 (117,657)
query : 1 - 2,806 (2,806/2,806)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11.5, nucl 8.5, mito 4, plas 3,
mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000206)
HIX0000207
HIT000010457
(
AK027183
)
Representative transcript
(Conserved hypothetical protein.)
genome : 20,010,584 - 20,016,628 (6,045)
query : 1 - 3,082 (3,082/3,104)
3 exons
identity = 0.996
3'(0.999;0.996;0.990)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 5.5, cyto_nucl 5.16667,
cyto_pero 4.33333, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000207)
HIX0000206
HIT000597742 (
ENST00000494342
)
(Transmembrane and coiled-coil domain-containing protein 4.)
genome : 20,020,985 - 20,027,703 (6,719)
query : 1 - 503 (503/503)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, cyto_nucl 10, extr 8, nucl 8, mito 4,
extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000206)
HIX0000206
HIT000250097
(
AL049846
)
(Transmembrane and coiled-coil domain-containing protein 4.)
genome : 20,063,865 - 20,107,259 (43,395)
query : 1 - 1,272 (1,272/1,272)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007941 : Protein of unknown function DUF726
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, cyto_nucl 8.5, nucl 7.5, plas 5, mito 4.5,
mito_pero 4, pero 2.5, extr_plas 2.5, cysk_plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000206)
HIX0000206
HIT000250098
(
AL049847
)
(Transmembrane and coiled-coil domain-containing protein 4.)
genome : 20,063,865 - 20,107,257 (43,393)
query : 1 - 1,150 (1,150/1,150)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007941 : Protein of unknown function DUF726
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 7.5, cyto_nucl 7.5, cyto 6.5, plas 5,
mito_pero 4, mito 3.5, pero 3.5, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000206)
HIX0000206
HIT000592750 (
ENST00000489135
)
(Transmembrane and coiled-coil domain-containing protein 4.)
genome : 20,063,865 - 20,107,257 (43,393)
query : 1 - 1,150 (1,150/1,150)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 7.5, cyto_nucl 7.5, cyto 6.5, plas 5,
mito_pero 4, mito 3.5, pero 3.5, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000206)
HIX0000206
HIT000428176
(
AK309310
)
(Transmembrane and coiled-coil domain-containing protein 4.)
genome : 20,071,197 - 20,125,745 (54,549)
query : 1 - 1,663 (1,663/1,663)
11 exons
identity = 0.998
3'(1.000;0.995;0.993;1.000)5'
coverage = 1.000
InterPro :
IPR007941 : Protein of unknown function DUF726
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, cyto_nucl 8, nucl 6.5, plas 5, mito 4.5,
mito_pero 4.5, pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000206)
HIX0000206
HIT000428766
(
AK309900
)
(Transmembrane and coiled-coil domain-containing protein 4.)
genome : 20,071,537 - 20,113,567 (42,031)
query : 1 - 1,422 (1,422/1,422)
8 exons
identity = 0.996
3'(0.998;0.986;1.000)5'
coverage = 1.000
InterPro :
IPR007941 : Protein of unknown function DUF726
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, cyto_nucl 8, nucl 6.5, mito 5.5, plas 5,
mito_pero 4.5, pero 2.5, extr_plas 2.5, cysk_plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000206)
HIX0000206
HIT000599843 (
ENST00000496528
)
(Transmembrane and coiled-coil domain-containing protein 4.)
genome : 20,073,656 - 20,126,438 (52,783)
query : 1 - 804 (804/804)
7 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 15, mito 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000206)
HIX0000206
HIT000567019 (
ENST00000462171
)
(Transmembrane and coiled-coil domain-containing protein 4.)
genome : 20,076,574 - 20,097,920 (21,347)
query : 1 - 573 (573/573)
4 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12, extr 7, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000206)
HIX0203912
HIT000656950 (
NM_001204088
)
(Neuroblastoma suppressor of tumorigenicity 1; DAN domain family member 1; Protein N03; Zinc finger protein DAN; Precursor;)
genome : 19,923,471 - 19,984,949 (61,479)
query : 1 - 2,210 (2,210/2,210)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203912)
HIX0203912
HIT000656951 (
NM_001204089
)
(Neuroblastoma suppressor of tumorigenicity 1; DAN domain family member 1; Protein N03; Zinc finger protein DAN; Precursor;)
genome : 19,923,471 - 19,984,949 (61,479)
query : 1 - 2,025 (2,025/2,025)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203912)
HIX0203912
HIT000422253
(
AK289456
)
Representative transcript
(Neuroblastoma suppressor of tumorigenicity 1; DAN domain family member 1; Protein N03; Zinc finger protein DAN; Precursor;)
genome : 19,923,473 - 19,984,549 (61,077)
query : 1 - 1,626 (1,626/1,626)
4 exons
identity = 0.996
5'(1.000;1.000;1.000;0.995)3'
coverage = 1.000
InterPro :
IPR004133 : DAN
IPR006207 : Cystine knot, C-terminal
IPR016728 : Neuroblastoma suppressor of tumourigenicity 1
IPR029034 : Cystine-knot cytokine
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203912)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AB044337
Mus
sp. (Mouse) : AK158008
Tetraodon
sp. (Tetraodon) : CR688001
Equus
sp. (Horse) : ENSECAT00000007321
Oryzias
sp. (Medaka) : ENSORLT00000000176
Pongo
sp. (Orangutan) : ENSPPYT00000002132
Rattus
sp. (Rat) : S72637
Takifugu
sp. (Fugu) : SINFRUT00000136878
Macaca
sp. (Macaque) : XM_001093104
Pan
sp. (Chimpanzee) : XM_001163494
Canis
sp. (Dog) : XM_544529
Bos
sp. (Cow) : XM_615319
HIX0203912
HIT000714395 (
ENST00000602662
)
(Neuroblastoma suppressor of tumorigenicity 1; DAN domain family member 1; Protein N03; Zinc finger protein DAN; Precursor;)
genome : 19,923,473 - 19,984,549 (61,077)
query : 1 - 1,623 (1,623/1,623)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203912)
HIX0203912
HIT000714026 (
ENST00000602293
)
(Mitochondrial inner membrane organizing system protein 1 isoform a.)
genome : 19,923,561 - 19,983,419 (59,859)
query : 1 - 820 (820/820)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203912)
HIX0203912
HIT000714117 (
ENST00000602384
)
(C1orf151-NBL1 read-through protein isoform b precursor.)
genome : 19,923,561 - 19,983,407 (59,847)
query : 1 - 999 (999/999)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203912)
HIX0203912
HIT000714183 (
ENST00000602450
)
(C1orf151-NBL1 read-through protein isoform a.)
genome : 19,923,562 - 19,983,420 (59,859)
query : 1 - 590 (590/590)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203912)
HIX0149308
pHIT000097305 ( pHIT000097305 )
Representative transcript
(Conserved hypothetical protein.)
genome : 19,934,608 - 20,005,861 (71,254)
query : 1 - 2,082 (2,082/2,082)
9 exons
InterPro :
IPR001971 : Ribosomal protein S11
IPR002232 : 5-Hydroxytryptamine 6 receptor
IPR004133 : DAN
IPR006207 : Cystine knot, C-terminal
GO :
0003735 : Molecular Function : structural constituent of ribosome
0004993 : Molecular Function : serotonin receptor activity
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0149308)
CAGE tag :
T01F012E1025
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF134158
Pan
sp. (Chimpanzee) : AY665263
Danio
sp. (Zebrafish) : ENSDART00000077067
Equus
sp. (Horse) : ENSECAT00000005139
Pongo
sp. (Orangutan) : ENSPPYT00000002130
Canis
sp. (Dog) : XM_544528
Bos
sp. (Cow) : XM_589622
HIX0149308
pHIT000097305 ( pHIT000097305 )
Representative transcript
(Conserved hypothetical protein.)
genome : 19,934,608 - 20,005,861 (71,254)
query : 1 - 2,082 (2,082/2,082)
9 exons
InterPro :
IPR001971 : Ribosomal protein S11
IPR002232 : 5-Hydroxytryptamine 6 receptor
IPR004133 : DAN
IPR006207 : Cystine knot, C-terminal
GO :
0003735 : Molecular Function : structural constituent of ribosome
0004993 : Molecular Function : serotonin receptor activity
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0149308)
CAGE tag :
T01F012E1025
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF134158
Pan
sp. (Chimpanzee) : AY665263
Danio
sp. (Zebrafish) : ENSDART00000077067
Equus
sp. (Horse) : ENSECAT00000005139
Pongo
sp. (Orangutan) : ENSPPYT00000002130
Canis
sp. (Dog) : XM_544528
Bos
sp. (Cow) : XM_589622
HIX0200015
pHIT000097310 ( pHIT000097310 )
(5-hydroxytryptamine receptor 6; 5-HT-6; 5-HT6; Serotonin receptor 6;)
genome : 19,992,496 - 20,005,861 (13,366)
query : 1 - 1,074 (1,074/1,074)
3 exons
InterPro :
IPR002232 : 5-Hydroxytryptamine 6 receptor
GO :
0004993 : Molecular Function : serotonin receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200015)
CAGE tag :
T01R01308A6D
AL031727.43
19920001-20061938 F +
NCBI
AL031730.1
20061939-20080000 F -
NCBI