bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0160918
HIT000533907 (
ENST00000435973
)
(Hypothetical short protein.)
genome : 230,011,297 - 230,021,499 (10,203)
query : 1 - 385 (385/385)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, extr 11, cyto_nucl 10, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160918)
HIX0203467
eHIT000011591 ( ESTsASS_1_1597 )
Representative transcript
(Non-protein coding transcript.)
genome : 230,033,205 - 230,036,453 (3,249)
query : 1 - 441 (441/441)
4 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203467)
ESTs used for assembly :
DB446910
HIX0203467
eHIT000011591 ( ESTsASS_1_1597 )
Representative transcript
(Non-protein coding transcript.)
genome : 230,033,205 - 230,036,453 (3,249)
query : 1 - 441 (441/441)
4 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203467)
ESTs used for assembly :
DB446910
AL354826.6
229920001-230046195 F +
NCBI
BX323860.7
230046196-230080000 F +
NCBI