bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0000668
HIT000352353 (
ENST00000371073
)
genome : 64,936,428 - 65,158,741 (222,314)
query : 1 - 5,322 (5,322/5,322)
27 exons
identity = 1.000
5'()3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000668)
HIX0000668
HIT000113210 (
ENST00000290039
)
genome : 64,936,475 - 65,158,741 (222,267)
query : 1 - 5,275 (5,275/5,275)
27 exons
identity = 1.000
5'()3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000668)
HIX0000668
HIT000317505 (
NM_020925
)
genome : 64,936,476 - 65,158,741 (222,266)
query : 1 - 5,274 (5,274/5,274)
27 exons
identity = 1.000
5'()3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000668)
HIX0000668
HIT000249585
(
AK131297
)
genome : 64,971,595 - 65,025,358 (53,764)
query : 3 - 1,809 (1,807/1,809)
3 exons
identity = 0.998
5'()3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000668)
HIX0000668
HIT000054388
(
BX537603
)
genome : 64,971,598 - 65,158,736 (187,139)
query : 2 - 5,547 (5,546/5,565)
26 exons
identity = 0.998
5'()3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000668)
HIX0000668
HIT000599337 (
ENST00000495994
)
genome : 64,971,598 - 65,158,736 (187,139)
query : 1 - 5,547 (5,547/5,547)
26 exons
identity = 1.000
5'()3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000668)
AL355515.12
64992001-65008000 F +
NCBI
AT_rich
MIRb
AluSx
(T)n
(TG)n
L2c
L2a
L2a
MIRb
(TAG)n
AluSz6
MamRep4096
AluY
AluSx
MamRep4096
L2b
MIRb
AluSq2
MER5A
L1MB7
MIRb
MIR3
L2b
MIRb
MIRb
AT_rich
MIR3
L2c
L2a
L2c
L2a
L2c
(TG)n
L1ME4a
AluJo
MIR