bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0001014
HIT000350391 (
ENST00000369111
)
(Carbonic anhydrase 14; EC=4.2.1.1; Carbonate dehydratase XIV; Carbonic anhydrase XIV; CA-XIV; Precursor;)
genome : 150,230,169 - 150,237,478 (7,310)
query : 1 - 1,788 (1,788/1,788)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001014)
HIX0001014
HIT000693908 (
ENST00000582010
)
(Carbonic anhydrase 14; EC=4.2.1.1; Carbonate dehydratase XIV; Carbonic anhydrase XIV; CA-XIV; Precursor;)
genome : 150,230,169 - 150,237,478 (7,310)
query : 1 - 1,788 (1,788/1,788)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001014)
HIX0001014
HIT000081800
(
AK074765
)
(Carbonic anhydrase 14; EC=4.2.1.1; Carbonate dehydratase XIV; Carbonic anhydrase XIV; CA-XIV; Precursor;)
genome : 150,230,169 - 150,237,461 (7,293)
query : 1 - 1,771 (1,771/1,771)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;1.000;1.000;0.994;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018431 : Carbonic anhydrase, CA14
IPR023561 : Carbonic anhydrase, alpha-class
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001014)
HIX0001014
HIT000434335
(
AK315469
)
(Carbonic anhydrase 14; EC=4.2.1.1; Carbonate dehydratase XIV; Carbonic anhydrase XIV; CA-XIV; Precursor;)
genome : 150,230,209 - 150,237,059 (6,851)
query : 4 - 1,332 (1,329/1,332)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.998
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018431 : Carbonic anhydrase, CA14
IPR023561 : Carbonic anhydrase, alpha-class
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001014)
HIX0001014
HIT000058836
(
AB025904
)
Representative transcript
(Carbonic anhydrase 14; EC=4.2.1.1; Carbonate dehydratase XIV; Carbonic anhydrase XIV; CA-XIV; Precursor;)
genome : 150,230,218 - 150,237,477 (7,260)
query : 4 - 1,741 (1,738/1,757)
11 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.998
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018431 : Carbonic anhydrase, CA14
IPR023561 : Carbonic anhydrase, alpha-class
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001014)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK157764
Bos
sp. (Cow) : BC103148
Danio
sp. (Zebrafish) : BC107639
Rattus
sp. (Rat) : EF187253
Equus
sp. (Horse) : ENSECAT00000003315
Oryzias
sp. (Medaka) : ENSORLT00000012895
Pongo
sp. (Orangutan) : ENSPPYT00000001094
Tetraodon
sp. (Tetraodon) : GSTENT00015358001
Macaca
sp. (Macaque) : XM_001099083
Monodelphis
sp. (Opossum) : XM_001370481
Pan
sp. (Chimpanzee) : XM_524862
Canis
sp. (Dog) : XM_540298
HIX0001014
HIT000203921 (
NM_012113
)
(Carbonic anhydrase 14; EC=4.2.1.1; Carbonate dehydratase XIV; Carbonic anhydrase XIV; CA-XIV; Precursor;)
genome : 150,230,218 - 150,237,477 (7,260)
query : 4 - 1,741 (1,738/1,757)
11 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.998
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001014)
HIX0001014
HIT000427830
(
AK308964
)
(Conserved hypothetical protein.)
genome : 150,230,246 - 150,233,730 (3,485)
query : 1 - 1,519 (1,519/1,519)
2 exons
identity = 0.998
5'(1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 3, plas 2, pero 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001014)
HIX0001014
HIT000252733
(
AY358689
)
(Carbonic anhydrase 14; EC=4.2.1.1; Carbonate dehydratase XIV; Carbonic anhydrase XIV; CA-XIV; Precursor;)
genome : 150,230,254 - 150,237,476 (7,223)
query : 1 - 1,701 (1,701/1,701)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.996)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018431 : Carbonic anhydrase, CA14
IPR023561 : Carbonic anhydrase, alpha-class
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001014)
HIX0001014
HIT000489965
(
AK295341
)
(Carbonic anhydrase 14; EC=4.2.1.1; Carbonate dehydratase XIV; Carbonic anhydrase XIV; CA-XIV; Precursor;)
genome : 150,230,270 - 150,236,230 (5,961)
query : 1 - 1,382 (1,382/1,382)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018431 : Carbonic anhydrase, CA14
IPR023561 : Carbonic anhydrase, alpha-class
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, mito 8, lyso 4, E.R._mito 4, cyto_mito 4,
mito_pero 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001014)
HIX0001014
HIT000042128
(
BC034412
)
(Carbonic anhydrase 14; EC=4.2.1.1; Carbonate dehydratase XIV; Carbonic anhydrase XIV; CA-XIV; Precursor;)
genome : 150,230,284 - 150,237,477 (7,194)
query : 1 - 1,672 (1,672/1,767)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018431 : Carbonic anhydrase, CA14
IPR023561 : Carbonic anhydrase, alpha-class
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001014)
HIX0001014
HIT000423406
(
AK290609
)
(Carbonic anhydrase 14; EC=4.2.1.1; Carbonate dehydratase XIV; Carbonic anhydrase XIV; CA-XIV; Precursor;)
genome : 150,230,299 - 150,237,322 (7,024)
query : 1 - 1,502 (1,502/1,502)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018431 : Carbonic anhydrase, CA14
IPR023561 : Carbonic anhydrase, alpha-class
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001014)
HIX0001014
HIT000587860 (
ENST00000483993
)
(Carbonic anhydrase 14; EC=4.2.1.1; Carbonate dehydratase XIV; Carbonic anhydrase XIV; CA-XIV; Precursor;)
genome : 150,230,489 - 150,235,823 (5,335)
query : 1 - 985 (985/985)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 17, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001014)
HIX0001014
HIT000690073 (
ENST00000578127
)
(Carbonic anhydrase 14; EC=4.2.1.1; Carbonate dehydratase XIV; Carbonic anhydrase XIV; CA-XIV; Precursor;)
genome : 150,230,489 - 150,235,823 (5,335)
query : 1 - 985 (985/985)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 17, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001014)
HIX0001014
HIT000266796
(
BT020054
)
(Carbonic anhydrase 14; EC=4.2.1.1; Carbonate dehydratase XIV; Carbonic anhydrase XIV; CA-XIV; Precursor;)
genome : 150,230,524 - 150,237,058 (6,535)
query : 1 - 1,013 (1,013/1,014)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018431 : Carbonic anhydrase, CA14
IPR023561 : Carbonic anhydrase, alpha-class
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001014)
HIX0001015
HIT000252995
(
AY358951
)
(Gamma-secretase subunit APH-1A isoform 2.)
genome : 150,237,805 - 150,241,413 (3,609)
query : 1 - 2,064 (2,064/2,136)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;0.986;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009294 : Gamma-secretase subunit Aph-1
GO :
0016021 : Cellular Component : integral component of membrane
0016485 : Biological Process : protein processing
0043085 : Biological Process : positive regulation of catalytic activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000038838
(
BC020590
)
Representative transcript
(Gamma-secretase subunit APH-1A; APH-1a; Aph-1alpha; Presenilin-stabilization factor;)
genome : 150,237,805 - 150,241,399 (3,595)
query : 1 - 1,712 (1,712/1,780)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009294 : Gamma-secretase subunit Aph-1
GO :
0016021 : Cellular Component : integral component of membrane
0016485 : Biological Process : protein processing
0043085 : Biological Process : positive regulation of catalytic activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB173665
Danio
sp. (Zebrafish) : AF512428
Mus
sp. (Mouse) : BC024111
Rattus
sp. (Rat) : BC087081
Danio
sp. (Zebrafish) : BC097248
Bos
sp. (Cow) : BC103090
Monodelphis
sp. (Opossum) : ENSMODT00000023834
Pongo
sp. (Orangutan) : ENSPPYT00000001093
Tetraodon
sp. (Tetraodon) : GSTENT00034780001
Takifugu
sp. (Fugu) : SINFRUT00000141473
Equus
sp. (Horse) : XM_001489164
Gallus
sp. (Chicken) : XM_428797
Pan
sp. (Chimpanzee) : XM_513772
Canis
sp. (Dog) : XM_854934
HIX0001015
HIT000033930
(
BC008732
)
(Gamma-secretase subunit APH-1A isoform 2.)
genome : 150,237,805 - 150,241,366 (3,562)
query : 1 - 2,017 (2,017/2,058)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009294 : Gamma-secretase subunit Aph-1
GO :
0016021 : Cellular Component : integral component of membrane
0016485 : Biological Process : protein processing
0043085 : Biological Process : positive regulation of catalytic activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000205797 (
NM_016022
)
(Gamma-secretase subunit APH-1A isoform 2.)
genome : 150,237,799 - 150,241,609 (3,811)
query : 1 - 2,266 (2,266/2,290)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000397841 (
NM_001077628
)
(Gamma-secretase subunit APH-1A; APH-1a; Aph-1alpha; Presenilin-stabilization factor;)
genome : 150,237,799 - 150,241,609 (3,811)
query : 1 - 1,928 (1,928/1,952)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000723025 (
NM_001243771
)
(Gamma-secretase subunit APH-1A isoform 3.)
genome : 150,237,799 - 150,241,609 (3,811)
query : 1 - 2,095 (2,095/2,119)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, lyso 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000723026 (
NM_001243772
)
(Gamma-secretase subunit APH-1A isoform 4.)
genome : 150,237,799 - 150,241,609 (3,811)
query : 1 - 1,718 (1,718/1,742)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000726251 (
NR_045033
)
(Gamma-secretase subunit APH-1A isoform 3.)
genome : 150,237,799 - 150,241,609 (3,811)
query : 1 - 2,130 (2,130/2,154)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000726252 (
NR_045034
)
(Gamma-secretase subunit Aph-1b; Anterior-pharynx-defective protein 1b;)
genome : 150,237,799 - 150,241,609 (3,811)
query : 1 - 2,021 (2,021/2,045)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000726253 (
NR_045035
)
(Gamma-secretase subunit APH-1A isoform 4.)
genome : 150,237,799 - 150,241,609 (3,811)
query : 1 - 2,192 (2,192/2,216)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000037190
(
BC015568
)
(Gamma-secretase subunit APH-1A; APH-1a; Aph-1alpha; Presenilin-stabilization factor;)
genome : 150,237,805 - 150,241,368 (3,564)
query : 1 - 1,681 (1,681/1,699)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009294 : Gamma-secretase subunit Aph-1
GO :
0016021 : Cellular Component : integral component of membrane
0016485 : Biological Process : protein processing
0043085 : Biological Process : positive regulation of catalytic activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000034408
(
BC009501
)
(Gamma-secretase subunit APH-1A isoform 2.)
genome : 150,237,805 - 150,241,400 (3,596)
query : 1 - 2,051 (2,051/2,068)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009294 : Gamma-secretase subunit Aph-1
GO :
0016021 : Cellular Component : integral component of membrane
0016485 : Biological Process : protein processing
0043085 : Biological Process : positive regulation of catalytic activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000030238
(
BC001230
)
(Gamma-secretase subunit APH-1A; APH-1a; Aph-1alpha; Presenilin-stabilization factor;)
genome : 150,237,805 - 150,241,367 (3,563)
query : 13 - 1,692 (1,680/1,706)
7 exons
identity = 0.999
3'(1.000;0.992;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.993
InterPro :
IPR009294 : Gamma-secretase subunit Aph-1
GO :
0016021 : Cellular Component : integral component of membrane
0016485 : Biological Process : protein processing
0043085 : Biological Process : positive regulation of catalytic activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000038083
(
BC017699
)
(Gamma-secretase subunit APH-1A isoform 2.)
genome : 150,237,805 - 150,241,345 (3,541)
query : 1 - 1,996 (1,996/2,010)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009294 : Gamma-secretase subunit Aph-1
GO :
0016021 : Cellular Component : integral component of membrane
0016485 : Biological Process : protein processing
0043085 : Biological Process : positive regulation of catalytic activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000081018
(
AF508787
)
(Gamma-secretase subunit APH-1A isoform 2.)
genome : 150,237,805 - 150,241,267 (3,463)
query : 1 - 1,918 (1,918/1,927)
6 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009294 : Gamma-secretase subunit Aph-1
GO :
0016021 : Cellular Component : integral component of membrane
0016485 : Biological Process : protein processing
0043085 : Biological Process : positive regulation of catalytic activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000071648
(
AF151835
)
(Gamma-secretase subunit APH-1A isoform 2.)
genome : 150,237,804 - 150,241,311 (3,508)
query : 1 - 1,963 (1,963/1,967)
6 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR009294 : Gamma-secretase subunit Aph-1
GO :
0016021 : Cellular Component : integral component of membrane
0016485 : Biological Process : protein processing
0043085 : Biological Process : positive regulation of catalytic activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000350389 (
ENST00000369109
)
(Gamma-secretase subunit APH-1A; APH-1a; Aph-1alpha; Presenilin-stabilization factor;)
genome : 150,237,804 - 150,241,399 (3,596)
query : 1 - 1,713 (1,713/1,713)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000693723 (
ENST00000581822
)
(Gamma-secretase subunit APH-1A; APH-1a; Aph-1alpha; Presenilin-stabilization factor;)
genome : 150,237,804 - 150,241,399 (3,596)
query : 1 - 1,713 (1,713/1,713)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000313660 (
ENST00000360244
)
(Gamma-secretase subunit APH-1A isoform 2.)
genome : 150,237,806 - 150,241,703 (3,898)
query : 1 - 2,353 (2,353/2,353)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000696608 (
ENST00000584744
)
(Gamma-secretase subunit APH-1A isoform 2.)
genome : 150,237,806 - 150,241,703 (3,898)
query : 1 - 2,353 (2,353/2,353)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000082487
(
AK075452
)
(Gamma-secretase subunit APH-1A isoform 2.)
genome : 150,237,806 - 150,241,416 (3,611)
query : 2 - 2,067 (2,066/2,067)
6 exons
identity = 0.997
3'(0.998;1.000;0.992;1.000;1.000;0.994)5'
coverage = 1.000
InterPro :
IPR009294 : Gamma-secretase subunit Aph-1
GO :
0016021 : Cellular Component : integral component of membrane
0016485 : Biological Process : protein processing
0043085 : Biological Process : positive regulation of catalytic activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000426224
(
AK307358
)
(Gamma-secretase subunit Aph-1b; Anterior-pharynx-defective protein 1b;)
genome : 150,237,806 - 150,241,416 (3,611)
query : 1 - 1,821 (1,821/1,821)
4 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009294 : Gamma-secretase subunit Aph-1
GO :
0016021 : Cellular Component : integral component of membrane
0016485 : Biological Process : protein processing
0043085 : Biological Process : positive regulation of catalytic activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000493456
(
AK298832
)
(Gamma-secretase subunit APH-1A isoform 4.)
genome : 150,237,806 - 150,241,416 (3,611)
query : 1 - 1,518 (1,518/1,518)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009294 : Gamma-secretase subunit Aph-1
GO :
0016021 : Cellular Component : integral component of membrane
0016485 : Biological Process : protein processing
0043085 : Biological Process : positive regulation of catalytic activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000082330
(
AK075295
)
(Gamma-secretase subunit APH-1A isoform 2.)
genome : 150,237,806 - 150,241,328 (3,523)
query : 1 - 1,978 (1,978/1,978)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009294 : Gamma-secretase subunit Aph-1
GO :
0016021 : Cellular Component : integral component of membrane
0016485 : Biological Process : protein processing
0043085 : Biological Process : positive regulation of catalytic activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000045558
(
AK125685
)
(Gamma-secretase subunit Aph-1 family protein.)
genome : 150,237,806 - 150,239,812 (2,007)
query : 1 - 2,005 (2,005/2,005)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
InterPro :
IPR009294 : Gamma-secretase subunit Aph-1
GO :
0016021 : Cellular Component : integral component of membrane
0016485 : Biological Process : protein processing
0043085 : Biological Process : positive regulation of catalytic activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, E.R. 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000263161
(
BC068606
)
(Gamma-secretase subunit APH-1A isoform 3.)
genome : 150,237,876 - 150,254,712 (16,837)
query : 1 - 2,832 (2,832/2,893)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009294 : Gamma-secretase subunit Aph-1
GO :
0016021 : Cellular Component : integral component of membrane
0016485 : Biological Process : protein processing
0043085 : Biological Process : positive regulation of catalytic activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 2, golg 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000512210 (
ENST00000414276
)
(Gamma-secretase subunit APH-1A isoform 4.)
genome : 150,237,823 - 150,241,416 (3,594)
query : 1 - 1,501 (1,501/1,501)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000694101 (
ENST00000582205
)
(Gamma-secretase subunit APH-1A isoform 4.)
genome : 150,237,823 - 150,241,416 (3,594)
query : 1 - 1,501 (1,501/1,501)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000011151
(
AK027879
)
(Gamma-secretase subunit APH-1A isoform 2.)
genome : 150,237,869 - 150,241,379 (3,511)
query : 1 - 1,966 (1,966/1,966)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009294 : Gamma-secretase subunit Aph-1
GO :
0016021 : Cellular Component : integral component of membrane
0016485 : Biological Process : protein processing
0043085 : Biological Process : positive regulation of catalytic activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000492304
(
AK297680
)
(Gamma-secretase subunit APH-1A isoform 3.)
genome : 150,238,228 - 150,241,375 (3,148)
query : 1 - 1,467 (1,467/1,467)
6 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;0.996)5'
coverage = 1.000
InterPro :
IPR009294 : Gamma-secretase subunit Aph-1
GO :
0016021 : Cellular Component : integral component of membrane
0016485 : Biological Process : protein processing
0043085 : Biological Process : positive regulation of catalytic activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000495264
(
AK300640
)
(Gamma-secretase subunit APH-1A isoform 3.)
genome : 150,238,258 - 150,241,414 (3,157)
query : 1 - 1,441 (1,441/1,441)
5 exons
identity = 0.999
3'(1.000;0.992;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009294 : Gamma-secretase subunit Aph-1
GO :
0016021 : Cellular Component : integral component of membrane
0016485 : Biological Process : protein processing
0043085 : Biological Process : positive regulation of catalytic activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000493500
(
AK298876
)
(Gamma-secretase subunit APH-1A isoform 4.)
genome : 150,238,357 - 150,241,376 (3,020)
query : 13 - 1,413 (1,401/1,413)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009294 : Gamma-secretase subunit Aph-1
GO :
0016021 : Cellular Component : integral component of membrane
0016485 : Biological Process : protein processing
0043085 : Biological Process : positive regulation of catalytic activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000084463
(
AY113699
)
(Gamma-secretase subunit APH-1A; APH-1a; Aph-1alpha; Presenilin-stabilization factor;)
genome : 150,238,446 - 150,241,267 (2,822)
query : 1 - 939 (939/939)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009294 : Gamma-secretase subunit Aph-1
GO :
0016021 : Cellular Component : integral component of membrane
0016485 : Biological Process : protein processing
0043085 : Biological Process : positive regulation of catalytic activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000084462
(
AY113698
)
(Gamma-secretase subunit APH-1A isoform 2.)
genome : 150,238,450 - 150,241,267 (2,818)
query : 1 - 1,273 (1,273/1,273)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009294 : Gamma-secretase subunit Aph-1
GO :
0016021 : Cellular Component : integral component of membrane
0016485 : Biological Process : protein processing
0043085 : Biological Process : positive regulation of catalytic activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000566210 (
ENST00000461320
)
(Gamma-secretase subunit APH-1A; APH-1a; Aph-1alpha; Presenilin-stabilization factor;)
genome : 150,238,749 - 150,241,415 (2,667)
query : 1 - 1,038 (1,038/1,038)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 9.5, plas 7, nucl 4.5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000691415 (
ENST00000579487
)
(Gamma-secretase subunit APH-1A; APH-1a; Aph-1alpha; Presenilin-stabilization factor;)
genome : 150,238,749 - 150,241,415 (2,667)
query : 1 - 1,038 (1,038/1,038)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 9.5, plas 7, nucl 4.5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000433356
(
AK314490
)
(Gamma-secretase subunit APH-1A isoform 2.)
genome : 150,238,909 - 150,241,379 (2,471)
query : 1 - 926 (926/926)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.996)5'
coverage = 1.000
InterPro :
IPR009294 : Gamma-secretase subunit Aph-1
GO :
0016021 : Cellular Component : integral component of membrane
0016485 : Biological Process : protein processing
0043085 : Biological Process : positive regulation of catalytic activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000590069 (
ENST00000486308
)
(Gamma-secretase subunit APH-1A; APH-1a; Aph-1alpha; Presenilin-stabilization factor;)
genome : 150,239,356 - 150,240,166 (811)
query : 1 - 574 (574/574)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, lyso 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000693554 (
ENST00000581651
)
(Gamma-secretase subunit APH-1A; APH-1a; Aph-1alpha; Presenilin-stabilization factor;)
genome : 150,239,356 - 150,240,166 (811)
query : 1 - 574 (574/574)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, lyso 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000104672 (
ENST00000236017
)
(Gamma-secretase subunit APH-1A; APH-1a; Aph-1alpha; Presenilin-stabilization factor;)
genome : 150,239,475 - 150,241,423 (1,949)
query : 1 - 651 (651/663)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.982
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, lyso 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000696246 (
ENST00000584376
)
(Gamma-secretase subunit APH-1A; APH-1a; Aph-1alpha; Presenilin-stabilization factor;)
genome : 150,239,475 - 150,241,423 (1,949)
query : 1 - 651 (651/663)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.982
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, lyso 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000590460 (
ENST00000486720
)
(Gamma-secretase subunit APH-1A; APH-1a; Aph-1alpha; Presenilin-stabilization factor;)
genome : 150,239,497 - 150,240,096 (600)
query : 1 - 447 (447/447)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, extr 7, E.R. 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000690677 (
ENST00000578739
)
(Gamma-secretase subunit APH-1A; APH-1a; Aph-1alpha; Presenilin-stabilization factor;)
genome : 150,239,497 - 150,240,096 (600)
query : 1 - 447 (447/447)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, extr 7, E.R. 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000580727 (
ENST00000476538
)
(Gamma-secretase subunit APH-1A isoform 3.)
genome : 150,239,770 - 150,240,966 (1,197)
query : 1 - 793 (793/793)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 15, E.R. 8, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000696372 (
ENST00000584504
)
(Gamma-secretase subunit APH-1A isoform 3.)
genome : 150,239,770 - 150,240,966 (1,197)
query : 1 - 793 (793/793)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 15, E.R. 8, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001016
HIT000350382 (
ENST00000369102
)
(Uncharacterized protein C1orf54; Precursor;)
genome : 150,240,600 - 150,253,327 (12,728)
query : 1 - 1,251 (1,251/1,251)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001016)
HIX0001016
HIT000690473 (
ENST00000578531
)
(Uncharacterized protein C1orf54; Precursor;)
genome : 150,240,600 - 150,253,327 (12,728)
query : 1 - 1,251 (1,251/1,251)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001016)
HIX0001015
HIT000596547 (
ENST00000493092
)
(Hypothetical short protein.)
genome : 150,241,301 - 150,241,980 (680)
query : 1 - 585 (585/585)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15, cyto 9.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001015
HIT000695283 (
ENST00000583402
)
(Hypothetical short protein.)
genome : 150,241,301 - 150,241,980 (680)
query : 1 - 585 (585/585)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15, cyto 9.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001015)
HIX0001016
HIT000350379 (
ENST00000369099
)
(Uncharacterized protein C1orf54; Precursor;)
genome : 150,245,102 - 150,253,327 (8,226)
query : 1 - 600 (600/600)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001016)
HIX0001016
HIT000691960 (
ENST00000580040
)
(Uncharacterized protein C1orf54; Precursor;)
genome : 150,245,102 - 150,253,327 (8,226)
query : 1 - 600 (600/600)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001016)
HIX0001016
HIT000209287 (
NM_024579
)
(Uncharacterized protein C1orf54; Precursor;)
genome : 150,245,183 - 150,253,335 (8,153)
query : 1 - 527 (527/543)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, E.R. 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001016)
HIX0001016
HIT000350378 (
ENST00000369098
)
(Uncharacterized protein C1orf54; Precursor;)
genome : 150,245,183 - 150,253,325 (8,143)
query : 1 - 418 (418/418)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 4, E.R. 4, E.R._mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001016)
HIX0001016
HIT000691662 (
ENST00000579738
)
(Uncharacterized protein C1orf54; Precursor;)
genome : 150,245,183 - 150,253,325 (8,143)
query : 1 - 418 (418/418)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 4, E.R. 4, E.R._mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001016)
HIX0001016
HIT000038117
(
BC017761
)
Representative transcript
(Uncharacterized protein C1orf54; Precursor;)
genome : 150,245,198 - 150,253,319 (8,122)
query : 1 - 496 (496/527)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.990;1.000)3'
coverage = 0.996
InterPro :
IPR027957 : Protein of unknown function DUF4634
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001016)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC028528
Bos
sp. (Cow) : BC118464
Equus
sp. (Horse) : ENSECAT00000013394
Macaca
sp. (Macaque) : ENSMMUT00000030106
Monodelphis
sp. (Opossum) : ENSMODT00000023837
Pongo
sp. (Orangutan) : ENSPPYT00000001092
Rattus
sp. (Rat) : XM_001061240
Pan
sp. (Chimpanzee) : XM_001165600
Canis
sp. (Dog) : XM_855180
HIX0001016
HIT000010148
(
AK026874
)
(Uncharacterized protein C1orf54; Precursor;)
genome : 150,245,198 - 150,253,327 (8,130)
query : 1 - 504 (504/519)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.990;1.000)3'
coverage = 0.994
InterPro :
IPR027957 : Protein of unknown function DUF4634
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, E.R. 6, mito 3, E.R._golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001016)
HIX0001017
HIT000040398
(
BC027999
)
Representative transcript
(Conserved hypothetical protein.)
genome : 150,254,953 - 150,259,503 (4,551)
query : 1 - 1,431 (1,431/1,478)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001017)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK164001
Rattus
sp. (Rat) : BC085879
Bos
sp. (Cow) : ENSBTAT00000028639
Equus
sp. (Horse) : ENSECAT00000010683
Oryzias
sp. (Medaka) : ENSORLT00000012901
Pongo
sp. (Orangutan) : ENSPPYT00000001091
Takifugu
sp. (Fugu) : SINFRUT00000139892
Macaca
sp. (Macaque) : XM_001100448
Monodelphis
sp. (Opossum) : XM_001370612
Pan
sp. (Chimpanzee) : XM_513773
Canis
sp. (Dog) : XM_540300
HIX0001017
HIT000350374 (
ENST00000369094
)
(Conserved hypothetical protein.)
genome : 150,254,953 - 150,259,505 (4,553)
query : 1 - 1,179 (1,179/1,179)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001017)
HIX0001017
HIT000350375 (
ENST00000369095
)
(Conserved hypothetical protein.)
genome : 150,254,953 - 150,259,505 (4,553)
query : 1 - 1,433 (1,433/1,433)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001017)
HIX0001017
HIT000689146 (
ENST00000577190
)
(Conserved hypothetical protein.)
genome : 150,254,953 - 150,259,505 (4,553)
query : 1 - 1,433 (1,433/1,433)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001017)
HIX0001017
HIT000690655 (
ENST00000578717
)
(Conserved hypothetical protein.)
genome : 150,254,953 - 150,259,505 (4,553)
query : 1 - 1,179 (1,179/1,179)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001017)
HIX0001017
HIT000544941 (
ENST00000447007
)
(Conserved hypothetical protein.)
genome : 150,254,953 - 150,259,149 (4,197)
query : 1 - 771 (771/771)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 10, mito 8, cyto 5.5,
mito_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001017)
HIX0001017
HIT000696989 (
ENST00000585131
)
(Conserved hypothetical protein.)
genome : 150,254,953 - 150,259,149 (4,197)
query : 1 - 771 (771/771)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 10, mito 8, cyto 5.5,
mito_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001017)
HIX0001017
HIT000089270
(
BC017397
)
(Conserved hypothetical protein.)
genome : 150,254,974 - 150,259,501 (4,528)
query : 4 - 1,157 (1,154/1,182)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 14.5, cyto 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001017)
HIX0001017
HIT000515332 (
ENST00000417398
)
(Conserved hypothetical protein.)
genome : 150,255,182 - 150,259,188 (4,007)
query : 1 - 838 (838/838)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, mito 9, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001017)
HIX0001017
HIT000689274 (
ENST00000577320
)
(Conserved hypothetical protein.)
genome : 150,255,182 - 150,259,188 (4,007)
query : 1 - 838 (838/838)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, mito 9, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001017)
HIX0001017
HIT000053096
(
BC047238
)
(Conserved hypothetical protein.)
genome : 150,255,229 - 150,259,501 (4,273)
query : 1 - 1,742 (1,742/1,758)
5 exons
identity = 0.998
5'(0.998;1.000;1.000;1.000;0.998)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001017)
HIX0001017
HIT000212930 (
NM_144697
)
(Conserved hypothetical protein.)
genome : 150,255,229 - 150,259,501 (4,273)
query : 1 - 1,742 (1,742/1,758)
5 exons
identity = 0.998
5'(0.998;1.000;1.000;1.000;0.998)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15.5, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001017)
HIX0001017
HIT000113268 (
ENST00000290363
)
(Conserved hypothetical protein.)
genome : 150,255,229 - 150,259,505 (4,277)
query : 1 - 1,746 (1,746/1,746)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001017)
HIX0001017
HIT000696157 (
ENST00000584286
)
(Conserved hypothetical protein.)
genome : 150,255,229 - 150,259,505 (4,277)
query : 1 - 1,746 (1,746/1,746)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001017)
HIX0001017
HIT000434263
(
AK315397
)
(Conserved hypothetical protein.)
genome : 150,255,259 - 150,259,366 (4,108)
query : 1 - 1,578 (1,578/1,578)
5 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001017)
HIX0001017
HIT000023585
(
AK098755
)
(Conserved hypothetical protein.)
genome : 150,255,259 - 150,257,945 (2,687)
query : 1 - 1,806 (1,806/1,806)
3 exons
identity = 0.996
5'(0.999;1.000;0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 13.5, extr 6, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001017)
HIX0001017
HIT000573786 (
ENST00000469255
)
(Conserved hypothetical protein.)
genome : 150,255,259 - 150,257,945 (2,687)
query : 1 - 1,803 (1,803/1,803)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 13.5, extr 6, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001017)
HIX0001017
HIT000693125 (
ENST00000581218
)
(Conserved hypothetical protein.)
genome : 150,255,259 - 150,257,945 (2,687)
query : 1 - 1,803 (1,803/1,803)
3 exons
identity = 0.999
5'(1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 13.5, extr 6, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001017)
HIX0001017
HIT000013574
(
AK056960
)
(Conserved hypothetical protein.)
genome : 150,255,662 - 150,259,502 (3,841)
query : 1 - 1,310 (1,310/1,310)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;0.991;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001017)
HIX0001017
HIT000600497 (
ENST00000497211
)
(Conserved hypothetical protein.)
genome : 150,255,944 - 150,259,045 (3,102)
query : 1 - 495 (495/495)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 10, cyto_nucl 9.5, nucl 5, extr 3,
pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001017)
HIX0001017
HIT000690347 (
ENST00000578404
)
(Conserved hypothetical protein.)
genome : 150,255,944 - 150,259,045 (3,102)
query : 1 - 495 (495/495)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 10, cyto_nucl 9.5, nucl 5, extr 3,
pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001017)
AL138795.21
150226255-150266254 F +
NCBI