bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0023859
HIT000543531 (
ENST00000445597
)
(Dynein heavy chain 14, axonemal isoform 2.)
genome : 225,083,964 - 225,586,971 (503,008)
query : 1 - 10,524 (10,524/10,524)
61 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023859)
HIX0023859
HIT000528026 (
ENST00000430092
)
(Dynein heavy chain 14, axonemal isoform 2.)
genome : 225,117,356 - 225,586,996 (469,641)
query : 1 - 13,788 (13,788/13,788)
84 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023859)
HIX0023859
HIT000562093 (
NM_001373
)
(Dynein heavy chain 14, axonemal isoform 2.)
genome : 225,117,356 - 225,586,996 (469,641)
query : 1 - 13,788 (13,788/13,788)
84 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023859)
HIX0023859
HIT000537309 (
ENST00000439375
)
(Dynein heavy chain 14, axonemal isoform 1.)
genome : 225,140,405 - 225,586,971 (446,567)
query : 1 - 13,548 (13,548/13,548)
83 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023859)
HIX0023859
HIT000125197 (
ENST00000327794
)
(Dynein heavy chain 14, axonemal isoform 1.)
genome : 225,428,496 - 225,585,749 (157,254)
query : 1 - 8,471 (8,471/8,488)
40 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12.5, nucl 6.5, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023859)
HIX0023859
HIT000307077
(
CR936804
)
Representative transcript
(Dynein heavy chain 14, axonemal isoform 1.)
genome : 225,428,496 - 225,585,747 (157,252)
query : 1 - 8,468 (8,468/8,487)
40 exons
identity = 0.995
5'(1.000;1.000;0.994;1.000;1.000;1.000;0.994;
0.986)3'
coverage = 1.000
InterPro :
IPR003593 : AAA+ ATPase domain
IPR024317 : Dynein heavy chain, P-loop containing D4 domain
IPR024743 : Dynein heavy chain, coiled coil stalk
IPR026983 : Dynein heavy chain
GO :
0000166 : Molecular Function : nucleotide binding
0003777 : Molecular Function : microtubule motor activity
0007018 : Biological Process : microtubule-based movement
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12.5, nucl 6.5, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023859)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : ENSBTAT00000011123
Oryzias
sp. (Medaka) : ENSORLT00000009068
Pan
sp. (Chimpanzee) : ENSPTRT00000003717
Macaca
sp. (Macaque) : XM_001092147
Equus
sp. (Horse) : XM_001915111
Danio
sp. (Zebrafish) : XM_001920090
Canis
sp. (Dog) : XM_537236
HIX0023859
HIT000525937 (
ENST00000428003
)
(Dynein heavy chain 14, axonemal isoform 1.)
genome : 225,577,442 - 225,586,994 (9,553)
query : 1 - 681 (681/681)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 10.5, cyto 8.5, extr 4, mito 4,
pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023859)
HIX0001633
HIT000319082 (
NM_194442
)
(Lamin-B receptor; Integral nuclear envelope inner membrane protein; LMN2R;)
genome : 225,589,204 - 225,616,557 (27,354)
query : 1 - 3,813 (3,813/3,827)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001633)
HIX0001633
HIT000199211 (
NM_002296
)
(Lamin-B receptor; Integral nuclear envelope inner membrane protein; LMN2R;)
genome : 225,589,204 - 225,615,815 (26,612)
query : 1 - 3,823 (3,823/3,837)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001633)
HIX0001633
HIT000038730
(
BC020079
)
Representative transcript
(Lamin-B receptor; Integral nuclear envelope inner membrane protein; LMN2R;)
genome : 225,589,204 - 225,615,737 (26,534)
query : 1 - 3,745 (3,745/3,759)
14 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001171 : Ergosterol biosynthesis ERG4/ERG24
IPR002999 : Tudor domain
IPR018083 : Sterol reductase, conserved site
IPR019023 : Lamin-B receptor of TUDOR domain
GO :
0016020 : Cellular Component : membrane
0016628 : Molecular Function : oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001633)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB002466
Mus
sp. (Mouse) : AK151798
Danio
sp. (Zebrafish) : BC075756
Bos
sp. (Cow) : BC150011
Pongo
sp. (Orangutan) : CR860142
Monodelphis
sp. (Opossum) : ENSMODT00000036765
Oryzias
sp. (Medaka) : ENSORLT00000013411
Tetraodon
sp. (Tetraodon) : GSTENT00020397001
Takifugu
sp. (Fugu) : SINFRUT00000138827
Macaca
sp. (Macaque) : XM_001094360
Pan
sp. (Chimpanzee) : XM_001137563
Equus
sp. (Horse) : XM_001488715
Canis
sp. (Dog) : XM_547512
Gallus
sp. (Chicken) : Y00822
HIX0001633
HIT000110845 (
ENST00000272163
)
(Lamin-B receptor; Integral nuclear envelope inner membrane protein; LMN2R;)
genome : 225,589,204 - 225,615,737 (26,534)
query : 1 - 3,745 (3,745/3,745)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001633)
HIX0001633
HIT000130809 (
ENST00000338179
)
(Lamin-B receptor; Integral nuclear envelope inner membrane protein; LMN2R;)
genome : 225,589,205 - 225,616,519 (27,315)
query : 1 - 3,774 (3,774/3,774)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001633)
HIX0001633
HIT000192651
(
L25931
)
(Lamin-B receptor; Integral nuclear envelope inner membrane protein; LMN2R;)
genome : 225,589,213 - 225,615,716 (26,504)
query : 1 - 3,714 (3,714/3,714)
14 exons
identity = 0.999
3'(0.999;0.984;1.000;1.000;1.000;1.000;0.995;
1.000;1.000;1.000;1.000;1.000;1.000;0.984)5'
coverage = 1.000
InterPro :
IPR001171 : Ergosterol biosynthesis ERG4/ERG24
IPR002999 : Tudor domain
IPR018083 : Sterol reductase, conserved site
IPR019023 : Lamin-B receptor of TUDOR domain
GO :
0016020 : Cellular Component : membrane
0016628 : Molecular Function : oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001633)
HIX0001633
HIT000330614
(
AK222834
)
(Lamin-B receptor; Integral nuclear envelope inner membrane protein; LMN2R;)
genome : 225,590,477 - 225,615,702 (25,226)
query : 1 - 2,438 (2,438/2,438)
14 exons
identity = 0.998
3'(0.997;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;1.000;0.995;1.000;0.995;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001171 : Ergosterol biosynthesis ERG4/ERG24
IPR002999 : Tudor domain
IPR018083 : Sterol reductase, conserved site
IPR019023 : Lamin-B receptor of TUDOR domain
GO :
0016020 : Cellular Component : membrane
0016628 : Molecular Function : oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001633)
HIX0001633
HIT000329449
(
AB209514
)
(Lamin-B receptor; Integral nuclear envelope inner membrane protein; LMN2R;)
genome : 225,590,651 - 225,615,722 (25,072)
query : 1 - 2,284 (2,284/2,284)
14 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.995;1.000;0.995;0.994;1.000)5'
coverage = 1.000
InterPro :
IPR001171 : Ergosterol biosynthesis ERG4/ERG24
IPR002999 : Tudor domain
IPR018083 : Sterol reductase, conserved site
IPR019023 : Lamin-B receptor of TUDOR domain
GO :
0016020 : Cellular Component : membrane
0016628 : Molecular Function : oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001633)
HIX0001633
HIT000538956 (
ENST00000441022
)
(Lamin-B receptor; Integral nuclear envelope inner membrane protein; LMN2R;)
genome : 225,590,792 - 225,592,267 (1,476)
query : 1 - 536 (536/536)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 18, cyto_nucl 14, nucl 6, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001633)
HIX0001633
HIT000431124
(
AK312258
)
(Lamin-B receptor; Integral nuclear envelope inner membrane protein; LMN2R;)
genome : 225,591,005 - 225,615,756 (24,752)
query : 1 - 1,963 (1,963/1,963)
14 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.982;1.000;0.995;1.000;0.995;0.994;1.000)5'
coverage = 1.000
InterPro :
IPR001171 : Ergosterol biosynthesis ERG4/ERG24
IPR002999 : Tudor domain
IPR018083 : Sterol reductase, conserved site
IPR019023 : Lamin-B receptor of TUDOR domain
GO :
0016020 : Cellular Component : membrane
0016628 : Molecular Function : oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001633)
HIX0001633
HIT000521956 (
ENST00000424022
)
(Lamin-B receptor; Integral nuclear envelope inner membrane protein; LMN2R;)
genome : 225,594,264 - 225,599,119 (4,856)
query : 1 - 478 (478/478)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, pero 7, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001633)
HIX0001633
HIT000044989
(
AK125116
)
(Lamin-B receptor; Integral nuclear envelope inner membrane protein; LMN2R;)
genome : 225,599,525 - 225,602,712 (3,188)
query : 1 - 3,187 (3,187/3,187)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001633)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000000191
Pan
sp. (Chimpanzee) : ENSPTRT00000058154
Macaca
sp. (Macaque) : XM_001094727
HIX0001633
HIT000498213
(
AK303589
)
(Lamin-B receptor; Integral nuclear envelope inner membrane protein; LMN2R;)
genome : 225,600,232 - 225,615,755 (15,524)
query : 1 - 1,088 (1,088/1,088)
8 exons
identity = 0.994
3'(1.000;1.000;1.000;0.995;1.000;0.977;0.994;
1.000)5'
coverage = 1.000
InterPro :
IPR001171 : Ergosterol biosynthesis ERG4/ERG24
IPR002999 : Tudor domain
IPR019023 : Lamin-B receptor of TUDOR domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001633)
HIX0028542
HIT000068273
(
AF090941
)
Representative transcript
(Conserved hypothetical protein.)
genome : 225,600,404 - 225,602,041 (1,638)
query : 1 - 1,638 (1,638/1,663)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 18.5, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028542)
HIX0028542
HIT000348125 (
ENST00000366845
)
(Conserved hypothetical protein.)
genome : 225,600,404 - 225,602,040 (1,637)
query : 1 - 1,637 (1,637/1,637)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 18.5, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028542)
HIX0001633
HIT000590774 (
ENST00000487054
)
(Lamin-B receptor; Integral nuclear envelope inner membrane protein; LMN2R;)
genome : 225,605,252 - 225,607,064 (1,813)
query : 1 - 731 (731/731)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, golg 3, cyto 2.5, lyso 2, cyto_mito 2,
E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001633)
HIX0001633
HIT000523014 (
ENST00000425080
)
(Lamin-B receptor; Integral nuclear envelope inner membrane protein; LMN2R;)
genome : 225,606,965 - 225,616,627 (9,663)
query : 1 - 874 (874/874)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 5, mito 2, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001633)
HIX0001633
HIT000592272 (
ENST00000488632
)
(Lamin-B receptor; Integral nuclear envelope inner membrane protein; LMN2R;)
genome : 225,607,427 - 225,610,129 (2,703)
query : 1 - 425 (425/425)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001633)
HIX0001633
HIT000519317 (
ENST00000421383
)
(Conserved hypothetical protein.)
genome : 225,611,623 - 225,615,599 (3,977)
query : 1 - 736 (736/736)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001633)
HIX0159874
HIT000526576 (
ENST00000428642
)
(Hypothetical short protein.)
genome : 225,634,945 - 225,653,045 (18,101)
query : 1 - 397 (397/397)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159874)
HIX0159874
HIT000530992 (
ENST00000433058
)
(Hypothetical short protein.)
genome : 225,635,693 - 225,652,985 (17,293)
query : 1 - 656 (656/656)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159874)
HIX0001634
HIT000094792
(
BC037319
)
(Conserved hypothetical protein.)
genome : 225,674,538 - 225,677,775 (3,238)
query : 5 - 3,242 (3,238/3,315)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001634)
HIX0001634
HIT000207040 (
NM_018212
)
(Protein enabled homolog isoform b.)
genome : 225,674,534 - 225,840,845 (166,312)
query : 1 - 13,109 (13,109/13,109)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 14.5, cyto 10.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001634)
HIX0001634
HIT000316533 (
NM_001008493
)
(Protein enabled homolog;)
genome : 225,674,534 - 225,840,845 (166,312)
query : 1 - 13,172 (13,172/13,172)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 14.5, cyto 10.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001634)
HIX0001634
HIT000592170 (
ENST00000488523
)
(Protein enabled homolog isoform b.)
genome : 225,677,502 - 225,700,398 (22,897)
query : 1 - 584 (584/584)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14, nucl 7.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001634)
HIX0001634
HIT000348124 (
ENST00000366844
)
(Protein enabled homolog;)
genome : 225,680,538 - 225,840,844 (160,307)
query : 1 - 7,167 (7,167/7,167)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 14.5, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001634)
HIX0001634
HIT000008382
(
AK025108
)
(Hypothetical short protein.)
genome : 225,682,518 - 225,684,351 (1,834)
query : 1 - 1,836 (1,836/1,852)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, pero 3, plas 2, E.R. 2, mito_pero 2,
cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001634)
HIX0001634
HIT000024961
(
AL133059
)
(Protein enabled homolog isoform b.)
genome : 225,683,180 - 225,702,339 (19,160)
query : 1 - 2,834 (2,834/2,873)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
InterPro :
IPR014885 : VASP tetramerisation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito_nucl 12.8333, mito 12, nucl 11.5,
cyto_nucl 8.66667, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001634)
HIX0001634
HIT000335274
(
BC095481
)
(Protein enabled homolog;)
genome : 225,683,179 - 225,840,844 (157,666)
query : 1 - 4,526 (4,526/4,541)
15 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;0.985;1.000;1.000;
1.000;1.000;1.000;0.997;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000156 : Ran binding domain
IPR000697 : WH1/EVH1 domain
IPR014885 : VASP tetramerisation
GO :
0046907 : Biological Process : intracellular transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14.5, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001634)
HIX0001634
HIT000243648
(
AF519769
)
Representative transcript
(Protein enabled homolog;)
genome : 225,683,180 - 225,840,661 (157,482)
query : 1 - 4,340 (4,340/4,340)
15 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000156 : Ran binding domain
IPR000697 : WH1/EVH1 domain
IPR014885 : VASP tetramerisation
GO :
0046907 : Biological Process : intracellular transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 14.5, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001634)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AB057641
Macaca
sp. (Macaque) : AB173371
Mus
sp. (Mouse) : BC062927
Rattus
sp. (Rat) : BC083927
Danio
sp. (Zebrafish) : BC090907
Equus
sp. (Horse) : ENSECAT00000024209
Oryzias
sp. (Medaka) : ENSORLT00000019562
Pongo
sp. (Orangutan) : ENSPPYT00000000189
Monodelphis
sp. (Opossum) : XM_001376503
Canis
sp. (Dog) : XM_547511
Bos
sp. (Cow) : XM_590728
Pan
sp. (Chimpanzee) : XR_019972
HIX0001634
HIT000021101
(
AK096246
)
(Protein enabled homolog isoform a.)
genome : 225,683,180 - 225,742,705 (59,526)
query : 1 - 3,759 (3,759/3,759)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR014885 : VASP tetramerisation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 17.5, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001634)
HIX0001634
HIT000046767
(
AK126894
)
(Protein enabled homolog; NPC-derived proline-rich protein 1; NDPP-1;)
genome : 225,683,180 - 225,705,257 (22,078)
query : 1 - 3,220 (3,220/3,220)
9 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.972)5'
coverage = 1.000
InterPro :
IPR014885 : VASP tetramerisation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 14, cyto 4.5, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001634)
HIX0001634
HIT000004109
(
AK001635
)
(Protein enabled homolog isoform a.)
genome : 225,683,180 - 225,702,448 (19,269)
query : 1 - 2,943 (2,943/2,943)
8 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, extr 6, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001634)
HIX0001634
HIT000047434
(
AK127561
)
(Protein enabled homolog isoform a.)
genome : 225,683,182 - 225,703,099 (19,918)
query : 1 - 3,655 (3,655/3,655)
9 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR014885 : VASP tetramerisation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 14.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001634)
HIX0001634
HIT000312345 (
ENST00000358675
)
(Protein enabled homolog isoform a.)
genome : 225,683,182 - 225,703,099 (19,918)
query : 1 - 3,655 (3,655/3,655)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 14.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001634)
HIX0001634
HIT000261801
(
BC065238
)
(Protein enabled homolog isoform a.)
genome : 225,684,789 - 225,754,992 (70,204)
query : 1 - 2,272 (2,272/2,286)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000697 : WH1/EVH1 domain
IPR014885 : VASP tetramerisation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto_mito 12.1667, mito_pero 11.8333,
nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001634)
HIX0001634
HIT000348123 (
ENST00000366843
)
(Protein enabled homolog isoform b.)
genome : 225,684,787 - 225,840,747 (155,961)
query : 1 - 2,758 (2,758/2,758)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 14.5, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001634)
HIX0001634
HIT000112504 (
ENST00000284563
)
(Protein enabled homolog isoform b.)
genome : 225,685,101 - 225,840,418 (155,318)
query : 1 - 2,856 (2,856/2,856)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 17.5, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001634)
HIX0001634
HIT000601345 (
ENST00000498108
)
(Protein enabled homolog isoform b.)
genome : 225,685,125 - 225,688,958 (3,834)
query : 1 - 713 (713/713)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, nucl 2, cyto 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001634)
HIX0001634
HIT000252046
(
AY345143
)
(Protein enabled homolog isoform b.)
genome : 225,685,245 - 225,840,747 (155,503)
query : 1 - 2,302 (2,302/2,302)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.992)5'
coverage = 1.000
InterPro :
IPR000156 : Ran binding domain
IPR000697 : WH1/EVH1 domain
IPR014885 : VASP tetramerisation
GO :
0046907 : Biological Process : intracellular transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 14.5, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001634)
HIX0001634
HIT000587820 (
ENST00000483952
)
(Protein enabled homolog isoform a.)
genome : 225,685,336 - 225,696,285 (10,950)
query : 1 - 578 (578/578)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 10.5, nucl 9.5, extr 7, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001634)
HIX0001634
HIT000422976
(
AK290179
)
(Protein enabled homolog isoform a.)
genome : 225,685,463 - 225,840,789 (155,327)
query : 1 - 2,124 (2,124/2,124)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.997;0.988;1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR000156 : Ran binding domain
IPR000697 : WH1/EVH1 domain
IPR014885 : VASP tetramerisation
GO :
0046907 : Biological Process : intracellular transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 14.5, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001634)
HIX0001634
HIT000645501
(
EU255274
)
(Protein enabled homolog;)
genome : 225,685,467 - 225,755,118 (69,652)
query : 8 - 1,616 (1,609/1,616)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.996
InterPro :
IPR000156 : Ran binding domain
IPR000697 : WH1/EVH1 domain
IPR014885 : VASP tetramerisation
GO :
0046907 : Biological Process : intracellular transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13.5, cyto 10.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001634)
HIX0001634
HIT000034926
(
BC010414
)
(Protein enabled homolog isoform b.)
genome : 225,706,747 - 225,742,787 (36,041)
query : 21 - 787 (767/804)
3 exons
identity = 0.976
3'(0.965;0.988;1.000)5'
coverage = 0.975
InterPro :
IPR000697 : WH1/EVH1 domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, mito_pero 9, nucl 8.5, cyto_nucl 8,
cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001634)
HIX0001634
HIT000601148 (
ENST00000497899
)
(Protein enabled homolog isoform b.)
genome : 225,706,746 - 225,742,785 (36,040)
query : 1 - 785 (785/785)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito_nucl 10.6667, nucl 10.5, mito 10.5,
cyto_nucl 8.5, mito_pero 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001634)
HIX0001634
HIT000475372 (
ENST00000391874
)
(Protein enabled homolog isoform b.)
genome : 225,706,900 - 225,767,959 (61,060)
query : 1 - 888 (888/888)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001634)
HIX0203610
HIT000454001_05
(
DQ587470
)
Representative transcript
(Non-protein coding transcript.)
genome : 225,858,639 - 225,858,668 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203610)
HIX0023684
HIT000043929
(
AK124056
)
Representative transcript
(Conserved hypothetical protein.)
genome : 225,888,306 - 225,939,945 (51,640)
query : 1 - 1,530 (1,530/1,530)
3 exons
identity = 0.998
5'(0.994;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023684)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : XM_001093778
HIX0023684
HIT000546198 (
ENST00000448264
)
(Conserved hypothetical protein.)
genome : 225,888,306 - 225,939,945 (51,640)
query : 1 - 1,530 (1,530/1,530)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023684)
HIX0160702
HIT000526082 (
ENST00000428148
)
(Conserved hypothetical protein.)
genome : 225,898,670 - 225,923,976 (25,307)
query : 1 - 534 (534/534)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, extr 10, cyto_nucl 5.16667,
cyto_pero 4.66667, nucl 4, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160702)
HIX0160212
HIT000509309 (
ENST00000411374
)
(Non-protein coding transcript.)
genome : 225,928,977 - 225,929,084 (108)
query : 1 - 108 (108/108)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160212)
AC092811.2
225557689-225719318 F -
NCBI
AL356216.13
225719319-225788875 F +
NCBI
AL591380.21
225788876-225857077 F +
NCBI
AC099066.3
225857078-225957688 F +
NCBI