bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0002785
HIT000254792
(
AY457063
)
(1-phosphatidylinositol 3-phosphate 5-kinase; Phosphatidylinositol 3-phosphate 5-kinase; EC=2.7.1.150; FYVE finger-containing phosphoinositide kinase; PIKfyve; Phosphatidylinositol 3-phosphate 5-kinase type III; PIPkin-III; Type III PIP kinase;)
genome : 209,130,991 - 209,220,092 (89,102)
query : 5 - 6,522 (6,518/6,522)
42 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 2.7.1.150
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000306 : FYVE zinc finger
IPR000591 : DEP domain
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR002498 : Phosphatidylinositol-4-phosphate 5-kinase, core
IPR011011 : Zinc finger, FYVE/PHD-type
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR016034 : Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup
IPR017455 : Zinc finger, FYVE-related
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027483 : Phosphatidylinositol-4-phosphate 5-kinase, C-terminal
IPR027484 : Phosphatidylinositol-4-phosphate 5-kinase, N-terminal domain
GO :
0005524 : Molecular Function : ATP binding
0016307 : Molecular Function : phosphatidylinositol phosphate kinase activity
0035556 : Biological Process : intracellular signal transduction
0044267 : Biological Process : cellular protein metabolic process
0046488 : Biological Process : phosphatidylinositol metabolic process
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002785)
HIX0002785
HIT000109288 (
ENST00000264380
)
(1-phosphatidylinositol 3-phosphate 5-kinase; Phosphatidylinositol 3-phosphate 5-kinase; EC=2.7.1.150; FYVE finger-containing phosphoinositide kinase; PIKfyve; Phosphatidylinositol 3-phosphate 5-kinase type III; PIPkin-III; Type III PIP kinase;)
genome : 209,130,991 - 209,223,475 (92,485)
query : 1 - 9,901 (9,901/9,901)
42 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.1.150
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002785)
HIX0002785
HIT000317183 (
NM_015040
)
(1-phosphatidylinositol 3-phosphate 5-kinase; Phosphatidylinositol 3-phosphate 5-kinase; EC=2.7.1.150; FYVE finger-containing phosphoinositide kinase; PIKfyve; Phosphatidylinositol 3-phosphate 5-kinase type III; PIPkin-III; Type III PIP kinase;)
genome : 209,130,991 - 209,223,475 (92,485)
query : 1 - 9,901 (9,901/9,901)
42 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 2.7.1.150
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002785)
HIX0002785
HIT000047642
(
AK127769
)
(1-phosphatidylinositol 3-phosphate 5-kinase; Phosphatidylinositol 3-phosphate 5-kinase; EC=2.7.1.150; FYVE finger-containing phosphoinositide kinase; PIKfyve; Phosphatidylinositol 3-phosphate 5-kinase type III; PIPkin-III; Type III PIP kinase;)
genome : 209,131,087 - 209,200,580 (69,494)
query : 1 - 4,215 (4,215/4,215)
25 exons
identity = 0.998
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.1.150
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000306 : FYVE zinc finger
IPR000591 : DEP domain
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR011011 : Zinc finger, FYVE/PHD-type
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR017455 : Zinc finger, FYVE-related
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
GO :
0005524 : Molecular Function : ATP binding
0035556 : Biological Process : intracellular signal transduction
0044267 : Biological Process : cellular protein metabolic process
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16.5, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002785)
HIX0002785
HIT000550498 (
ENST00000452564
)
(1-phosphatidylinositol 3-phosphate 5-kinase; Phosphatidylinositol 3-phosphate 5-kinase; EC=2.7.1.150; FYVE finger-containing phosphoinositide kinase; PIKfyve; Phosphatidylinositol 3-phosphate 5-kinase type III; PIPkin-III; Type III PIP kinase;)
genome : 209,131,087 - 209,200,580 (69,494)
query : 1 - 4,214 (4,214/4,214)
25 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.1.150
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16.5, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002785)
HIX0002785
HIT000016349
(
AK091482
)
(1-phosphatidylinositol 3-phosphate 5-kinase; Phosphatidylinositol 3-phosphate 5-kinase; EC=2.7.1.150; FYVE finger-containing phosphoinositide kinase; PIKfyve; Phosphatidylinositol 3-phosphate 5-kinase type III; PIPkin-III; Type III PIP kinase;)
genome : 209,190,642 - 209,220,891 (30,250)
query : 1 - 4,053 (4,053/4,053)
23 exons
identity = 0.996
5'(1.000;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.994;0.983;0.994;1.000;
1.000;0.996;1.000;0.995)3'
coverage = 1.000
EC number :
EC 2.7.1.150
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR002498 : Phosphatidylinositol-4-phosphate 5-kinase, core
IPR016034 : Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup
IPR027483 : Phosphatidylinositol-4-phosphate 5-kinase, C-terminal
IPR027484 : Phosphatidylinositol-4-phosphate 5-kinase, N-terminal domain
GO :
0005524 : Molecular Function : ATP binding
0016307 : Molecular Function : phosphatidylinositol phosphate kinase activity
0044267 : Biological Process : cellular protein metabolic process
0046488 : Biological Process : phosphatidylinositol metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 9.5, extr 8, mito 3.5,
E.R._mito 3, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002785)
HIX0002785
HIT000578999 (
ENST00000474721
)
(1-phosphatidylinositol 3-phosphate 5-kinase; Phosphatidylinositol 3-phosphate 5-kinase; EC=2.7.1.150; FYVE finger-containing phosphoinositide kinase; PIKfyve; Phosphatidylinositol 3-phosphate 5-kinase type III; PIPkin-III; Type III PIP kinase;)
genome : 209,199,096 - 209,201,589 (2,494)
query : 1 - 538 (538/538)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.1.150
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, mito 13, cyto_nucl 8.5, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002785)
HIX0002785
HIT000000698
(
AB023198
)
(1-phosphatidylinositol 3-phosphate 5-kinase; Phosphatidylinositol 3-phosphate 5-kinase; EC=2.7.1.150; FYVE finger-containing phosphoinositide kinase; PIKfyve; Phosphatidylinositol 3-phosphate 5-kinase type III; PIPkin-III; Type III PIP kinase;)
genome : 209,201,601 - 209,223,469 (21,869)
query : 1 - 5,182 (5,182/5,182)
15 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;0.983;0.994;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
EC number :
EC 2.7.1.150
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.5, nucl 11.5, golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002785)
HIX0002785
HIT000094034
(
BC035705
)
(1-phosphatidylinositol 3-phosphate 5-kinase; Phosphatidylinositol 3-phosphate 5-kinase; EC=2.7.1.150; FYVE finger-containing phosphoinositide kinase; PIKfyve; Phosphatidylinositol 3-phosphate 5-kinase type III; PIPkin-III; Type III PIP kinase;)
genome : 209,216,078 - 209,221,389 (5,312)
query : 12 - 2,056 (2,045/2,070)
5 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;0.995)3'
coverage = 0.995
EC number :
EC 2.7.1.150
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR002498 : Phosphatidylinositol-4-phosphate 5-kinase, core
IPR027483 : Phosphatidylinositol-4-phosphate 5-kinase, C-terminal
IPR027484 : Phosphatidylinositol-4-phosphate 5-kinase, N-terminal domain
GO :
0005524 : Molecular Function : ATP binding
0016307 : Molecular Function : phosphatidylinositol phosphate kinase activity
0044267 : Biological Process : cellular protein metabolic process
0046488 : Biological Process : phosphatidylinositol metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, nucl 5.5, mito 4, pero 4,
mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002785)
HIX0002785
HIT000024911
(
AL122124
)
(Hypothetical short protein.)
genome : 209,222,155 - 209,223,462 (1,308)
query : 1 - 1,311 (1,311/1,326)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 0.989
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002785)
HIX0200350
HIT000511416 (
ENST00000413482
)
(Parathyroid hormone 2 receptor; PTH2 receptor; Precursor;)
genome : 209,224,438 - 209,358,754 (134,317)
query : 1 - 2,473 (2,473/2,473)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200350)
HIX0200350
HIT000727706 (
NR_073601
)
(Parathyroid hormone 2 receptor; PTH2 receptor; Precursor;)
genome : 209,224,569 - 209,359,231 (134,663)
query : 1 - 2,818 (2,818/2,838)
13 exons
identity = 1.000
5'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200350)
HIX0200350
HIT000488805
(
AK294181
)
(Parathyroid hormone 2 receptor; PTH2 receptor; Precursor;)
genome : 209,224,569 - 209,358,754 (134,186)
query : 1 - 2,341 (2,341/2,341)
13 exons
identity = 0.998
5'(0.992;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000832 : GPCR, family 2, secretin-like
IPR001879 : GPCR, family 2, extracellular hormone receptor domain
IPR017981 : GPCR, family 2-like
IPR017983 : GPCR, family 2, secretin-like, conserved site
GO :
0004888 : Molecular Function : transmembrane signaling receptor activity
0004930 : Molecular Function : G-protein coupled receptor activity
0007166 : Biological Process : cell surface receptor signaling pathway
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200350)
HIX0200431
HIT000532840 (
ENST00000434906
)
(Conserved hypothetical protein.)
genome : 209,225,356 - 209,226,094 (739)
query : 1 - 739 (739/739)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 10, cyto_nucl 4.66667, nucl 4,
cyto_pero 3.16667, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200431)
HIX0200350
HIT000201766 (
NM_005048
)
(Parathyroid hormone 2 receptor; PTH2 receptor; Precursor;)
genome : 209,271,555 - 209,359,231 (87,677)
query : 1 - 2,714 (2,714/2,734)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200350)
HIX0200350
HIT000094625
(
BC036811
)
Representative transcript
(Parathyroid hormone 2 receptor; PTH2 receptor; Precursor;)
genome : 209,271,556 - 209,359,231 (87,676)
query : 1 - 2,713 (2,713/2,810)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000832 : GPCR, family 2, secretin-like
IPR001879 : GPCR, family 2, extracellular hormone receptor domain
IPR017981 : GPCR, family 2-like
IPR017983 : GPCR, family 2, secretin-like, conserved site
GO :
0004888 : Molecular Function : transmembrane signaling receptor activity
0004930 : Molecular Function : G-protein coupled receptor activity
0007166 : Biological Process : cell surface receptor signaling pathway
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200350)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : AF132085
Mus
sp. (Mouse) : AK045576
Bos
sp. (Cow) : ENSBTAT00000015912
Canis
sp. (Dog) : ENSCAFT00000021727
Oryzias
sp. (Medaka) : ENSORLT00000022690
Pongo
sp. (Orangutan) : ENSPPYT00000015265
Tetraodon
sp. (Tetraodon) : GSTENT00014484001
Takifugu
sp. (Fugu) : SINFRUT00000128588
Rattus
sp. (Rat) : U55836
Macaca
sp. (Macaque) : XM_001108598
Monodelphis
sp. (Opossum) : XM_001369519
Equus
sp. (Horse) : XM_001499116
Gallus
sp. (Chicken) : XM_418507
Pan
sp. (Chimpanzee) : XM_526012
Danio
sp. (Zebrafish) : XM_688200
HIX0200350
HIT000110945 (
ENST00000272847
)
(Parathyroid hormone 2 receptor; PTH2 receptor; Precursor;)
genome : 209,271,556 - 209,359,231 (87,676)
query : 1 - 2,713 (2,713/2,713)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200350)
HIX0200350
HIT000218757
(
U25128
)
(Parathyroid hormone 2 receptor; PTH2 receptor; Precursor;)
genome : 209,271,627 - 209,359,230 (87,604)
query : 1 - 2,641 (2,641/2,641)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000832 : GPCR, family 2, secretin-like
IPR001879 : GPCR, family 2, extracellular hormone receptor domain
IPR017981 : GPCR, family 2-like
IPR017983 : GPCR, family 2, secretin-like, conserved site
GO :
0004888 : Molecular Function : transmembrane signaling receptor activity
0004930 : Molecular Function : G-protein coupled receptor activity
0007166 : Biological Process : cell surface receptor signaling pathway
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200350)
HIX0200350
HIT000254967
(
AY497546
)
(Parathyroid hormone 2 receptor; PTH2 receptor; Precursor;)
genome : 209,271,769 - 209,358,384 (86,616)
query : 1 - 1,653 (1,653/1,653)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR000832 : GPCR, family 2, secretin-like
IPR001879 : GPCR, family 2, extracellular hormone receptor domain
IPR017981 : GPCR, family 2-like
IPR017983 : GPCR, family 2, secretin-like, conserved site
GO :
0004888 : Molecular Function : transmembrane signaling receptor activity
0004930 : Molecular Function : G-protein coupled receptor activity
0007166 : Biological Process : cell surface receptor signaling pathway
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200350)
HIX0200350
HIT000398708
(
U47124
)
(Parathyroid hormone 2 receptor; PTH2 receptor; Precursor;)
genome : 209,292,864 - 209,293,607 (744)
query : 1 - 744 (744/744)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, extr 13, cyto_nucl 8.5, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200350)
HIX0161649
HIT000540652 (
ENST00000442718
)
(Histone H3/CENP-A family protein.)
genome : 209,330,963 - 209,331,351 (389)
query : 1 - 389 (389/389)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 9, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161649)
HIX0162485
HIT000522562 (
ENST00000424628
)
(Conserved hypothetical protein.)
genome : 209,334,575 - 209,405,138 (70,564)
query : 1 - 520 (520/520)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162485)
HIX0200350
HIT000428693
(
AK309827
)
(Parathyroid hormone 2 receptor; PTH2 receptor; Precursor;)
genome : 209,353,811 - 209,704,824 (351,014)
query : 1 - 810 (810/811)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.983)3'
coverage = 0.999
InterPro :
IPR017983 : GPCR, family 2, secretin-like, conserved site
GO :
0004930 : Molecular Function : G-protein coupled receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 6, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200350)
HIX0200350
HIT000517013 (
ENST00000419079
)
(Parathyroid hormone 2 receptor; PTH2 receptor; Precursor;)
genome : 209,353,811 - 209,704,824 (351,014)
query : 1 - 811 (811/811)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 6, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200350)
HIX0162836
HIT000536739 (
ENST00000438805
)
(Conserved hypothetical protein.)
genome : 209,381,633 - 209,381,955 (323)
query : 1 - 323 (323/323)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, cyto_nucl 2, nucl 1.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162836)
HIX0204091
HIT000465211_05
(
DQ598680
)
Representative transcript
(Non-protein coding transcript.)
genome : 209,428,262 - 209,428,291 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204091)
HIX0204063
HIT000454001_11
(
DQ587470
)
Representative transcript
(Non-protein coding transcript.)
genome : 209,566,313 - 209,566,342 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204063)
HIX0200350
HIT000591174 (
ENST00000487472
)
(Conserved hypothetical protein.)
genome : 209,703,087 - 209,719,227 (16,141)
query : 1 - 558 (558/558)
5 exons
identity = 0.986
5'(1.000;0.951;0.978;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 5.5, cyto_nucl 4.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200350)
HIX0163154
HIT000549899 (
ENST00000451965
)
(Heat shock protein 70 family protein.)
genome : 209,937,321 - 209,938,872 (1,552)
query : 1 - 1,552 (1,552/1,552)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, E.R. 5, cyto 4, pero 4, cyto_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163154)
HIX0162346
HIT000516393 (
ENST00000418459
)
(Conserved hypothetical protein.)
genome : 210,009,965 - 210,012,411 (2,447)
query : 1 - 633 (633/633)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, extr 9, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162346)
HIX0161733
HIT000514026 (
ENST00000416092
)
(Conserved hypothetical protein.)
genome : 210,043,528 - 210,046,742 (3,215)
query : 1 - 327 (327/327)
2 exons
identity = 0.994
5'(1.000;0.987)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12, extr 11, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161733)
HIX0161733
HIT000524735 (
ENST00000426801
)
(Armadillo-like helical domain containing protein.)
genome : 210,043,690 - 210,045,847 (2,158)
query : 1 - 2,158 (2,158/2,158)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 14, nucl 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161733)
HIX0029807
HIT000366450 (
NM_001039538
)
(Microtubule-associated protein 2 isoform 5.)
genome : 210,288,771 - 210,598,834 (310,064)
query : 1 - 5,844 (5,844/5,844)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15, nucl 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000095413
(
BC038857
)
Representative transcript
(Microtubule-associated protein 2 isoform 5.)
genome : 210,288,782 - 210,595,240 (306,459)
query : 1 - 2,239 (2,239/2,286)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.997;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001084 : Microtubule associated protein, tubulin-binding repeat
IPR027324 : Microtubule associated protein MAP2/MAP4/Tau
GO :
0008017 : Molecular Function : microtubule binding
0015631 : Molecular Function : tubulin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15, nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168248
Mus
sp. (Mouse) : AK166380
Bos
sp. (Cow) : BC122731
Gallus
sp. (Chicken) : CR390890
Danio
sp. (Zebrafish) : ENSDART00000077358
Equus
sp. (Horse) : ENSECAT00000025852
Oryzias
sp. (Medaka) : ENSORLT00000019987
Pongo
sp. (Orangutan) : ENSPPYT00000015266
Tetraodon
sp. (Tetraodon) : GSTENT00015858001
Tetraodon
sp. (Tetraodon) : GSTENT00030465001
Takifugu
sp. (Fugu) : SINFRUT00000132114
Rattus
sp. (Rat) : X54100
Pan
sp. (Chimpanzee) : XM_001144404
Monodelphis
sp. (Opossum) : XM_001364832
Canis
sp. (Dog) : XM_845165
HIX0029807
HIT000102702 (
ENST00000199940
)
(Microtubule-associated protein 2 isoform 5.)
genome : 210,288,782 - 210,595,242 (306,461)
query : 1 - 2,241 (2,241/2,241)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000262281
(
BC066648
)
(Microtubule-associated protein 2; MAP-2;)
genome : 210,288,833 - 210,560,074 (271,242)
query : 1 - 3,569 (3,569/3,583)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR013588 : MAP2/Tau projection
IPR027324 : Microtubule associated protein MAP2/MAP4/Tau
GO :
0008017 : Molecular Function : microtubule binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000475685 (
ENST00000392193
)
(Microtubule-associated protein 2; MAP-2;)
genome : 210,444,039 - 210,543,352 (99,314)
query : 1 - 614 (614/614)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15.5, nucl 8.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000313747 (
ENST00000360351
)
(Microtubule-associated protein 2; MAP-2;)
genome : 210,444,145 - 210,598,842 (154,698)
query : 1 - 9,711 (9,711/9,711)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000386566
(
BC110423
)
(Microtubule-associated protein 2 isoform 2.)
genome : 210,444,155 - 210,595,247 (151,093)
query : 1 - 2,038 (2,038/2,115)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001084 : Microtubule associated protein, tubulin-binding repeat
IPR027324 : Microtubule associated protein MAP2/MAP4/Tau
GO :
0008017 : Molecular Function : microtubule binding
0015631 : Molecular Function : tubulin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 16, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000314819 (
ENST00000361559
)
(Microtubule-associated protein 2 isoform 2.)
genome : 210,444,155 - 210,595,247 (151,093)
query : 1 - 2,038 (2,038/2,038)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 16, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000543875 (
ENST00000445941
)
(Microtubule-associated protein 2; MAP-2;)
genome : 210,444,333 - 210,558,349 (114,017)
query : 1 - 2,019 (2,019/2,019)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000199271 (
NM_002374
)
(Microtubule-associated protein 2; MAP-2;)
genome : 210,444,403 - 210,598,834 (154,432)
query : 1 - 9,445 (9,445/9,445)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000210231 (
NM_031845
)
(Microtubule-associated protein 2 isoform 2.)
genome : 210,444,403 - 210,598,834 (154,432)
query : 1 - 5,377 (5,377/5,377)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 16, nucl 12
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000210233 (
NM_031847
)
(Microtubule-associated protein 2 isoform 4.)
genome : 210,444,403 - 210,598,834 (154,432)
query : 1 - 5,470 (5,470/5,470)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 15, nucl 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000217424
(
U01828
)
(Microtubule-associated protein 2; MAP-2;)
genome : 210,444,403 - 210,595,362 (150,960)
query : 1 - 5,968 (5,968/5,968)
15 exons
identity = 0.997
5'(0.974;1.000;1.000;0.990;0.991;1.000;0.999;
1.000;1.000;1.000;1.000;0.997;0.963;0.982;
0.996)3'
coverage = 1.000
InterPro :
IPR001084 : Microtubule associated protein, tubulin-binding repeat
IPR013588 : MAP2/Tau projection
IPR027324 : Microtubule associated protein MAP2/MAP4/Tau
GO :
0008017 : Molecular Function : microtubule binding
0015631 : Molecular Function : tubulin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000426469
(
AK307603
)
(Microtubule-associated protein 2; MAP-2;)
genome : 210,444,425 - 210,561,360 (116,936)
query : 1 - 3,370 (3,370/3,370)
9 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.999;
0.934;1.000)3'
coverage = 1.000
InterPro :
IPR013588 : MAP2/Tau projection
IPR027324 : Microtubule associated protein MAP2/MAP4/Tau
GO :
0008017 : Molecular Function : microtubule binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000475686 (
ENST00000392194
)
(Microtubule-associated protein 2 isoform 2.)
genome : 210,444,765 - 210,598,842 (154,078)
query : 1 - 5,303 (5,303/5,303)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 16, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000329265
(
AB209330
)
(Microtubule-associated protein 2 isoform 2.)
genome : 210,444,765 - 210,596,086 (151,322)
query : 1 - 2,547 (2,547/2,547)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001084 : Microtubule associated protein, tubulin-binding repeat
IPR027324 : Microtubule associated protein MAP2/MAP4/Tau
GO :
0008017 : Molecular Function : microtubule binding
0015631 : Molecular Function : tubulin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 16, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000091355
(
BC027583
)
(Microtubule-associated protein 2 isoform 5.)
genome : 210,476,049 - 210,595,240 (119,192)
query : 6 - 1,855 (1,850/1,870)
12 exons
identity = 0.998
5'(1.000;1.000;0.990;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.991;1.000)3'
coverage = 0.997
InterPro :
IPR001084 : Microtubule associated protein, tubulin-binding repeat
IPR027324 : Microtubule associated protein MAP2/MAP4/Tau
GO :
0008017 : Molecular Function : microtubule binding
0015631 : Molecular Function : tubulin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14.5, nucl 12, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000501705
(
BC143245
)
(Microtubule-associated protein 2 isoform 2.)
genome : 210,489,801 - 210,595,187 (105,387)
query : 1 - 1,564 (1,564/1,564)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001084 : Microtubule associated protein, tubulin-binding repeat
IPR027324 : Microtubule associated protein MAP2/MAP4/Tau
GO :
0008017 : Molecular Function : microtubule binding
0015631 : Molecular Function : tubulin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 16, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000387413
(
BC117123
)
(Microtubule-associated protein 2 isoform 2.)
genome : 210,489,806 - 210,595,187 (105,382)
query : 1 - 1,559 (1,559/1,559)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001084 : Microtubule associated protein, tubulin-binding repeat
IPR027324 : Microtubule associated protein MAP2/MAP4/Tau
GO :
0008017 : Molecular Function : microtubule binding
0015631 : Molecular Function : tubulin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 16, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000424243
(
AK291446
)
(Microtubule-associated protein 2 isoform 2.)
genome : 210,517,864 - 210,595,293 (77,430)
query : 7 - 1,625 (1,619/1,625)
9 exons
identity = 0.999
5'(1.000;0.991;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.996
InterPro :
IPR001084 : Microtubule associated protein, tubulin-binding repeat
IPR027324 : Microtubule associated protein MAP2/MAP4/Tau
GO :
0008017 : Molecular Function : microtubule binding
0015631 : Molecular Function : tubulin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 16, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000222124
(
U89329
)
(Microtubule-associated protein 2 isoform 2.)
genome : 210,517,895 - 210,595,233 (77,339)
query : 1 - 1,530 (1,530/1,539)
9 exons
identity = 0.993
5'(0.981;1.000;1.000;1.000;1.000;0.991;0.988;
1.000;0.997)3'
coverage = 0.994
InterPro :
IPR001084 : Microtubule associated protein, tubulin-binding repeat
IPR027324 : Microtubule associated protein MAP2/MAP4/Tau
GO :
0008017 : Molecular Function : microtubule binding
0015631 : Molecular Function : tubulin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 16, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000222125
(
U89330
)
(Microtubule-associated protein 2; MAP-2;)
genome : 210,517,895 - 210,595,233 (77,339)
query : 1 - 5,586 (5,586/5,595)
12 exons
identity = 0.998
5'(0.981;1.000;1.000;0.999;1.000;1.000;1.000;
1.000;0.991;0.988;1.000;0.997)3'
coverage = 0.998
InterPro :
IPR001084 : Microtubule associated protein, tubulin-binding repeat
IPR013588 : MAP2/Tau projection
IPR027324 : Microtubule associated protein MAP2/MAP4/Tau
GO :
0008017 : Molecular Function : microtubule binding
0015631 : Molecular Function : tubulin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000545119 (
ENST00000447185
)
(Microtubule-associated protein 2; MAP-2;)
genome : 210,517,895 - 210,595,121 (77,227)
query : 1 - 5,472 (5,472/5,472)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000550651 (
ENST00000452717
)
(Microtubule-associated protein 2 isoform 5.)
genome : 210,518,117 - 210,570,414 (52,298)
query : 1 - 624 (624/624)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12, nucl 6.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000576034 (
ENST00000471619
)
(Microtubule-associated protein 2; MAP-2;)
genome : 210,526,189 - 210,574,988 (48,800)
query : 1 - 967 (967/967)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 10, extr 4, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000586776 (
ENST00000482864
)
(Microtubule-associated protein 2; MAP-2;)
genome : 210,526,239 - 210,561,472 (35,234)
query : 1 - 563 (563/563)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13, nucl 10.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000566149 (
ENST00000461253
)
(Microtubule-associated protein 2; MAP-2;)
genome : 210,549,357 - 210,557,886 (8,530)
query : 1 - 555 (555/555)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 14.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000043222
(
AK123349
)
(Conserved hypothetical protein.)
genome : 210,554,505 - 210,557,061 (2,557)
query : 1 - 2,557 (2,557/2,557)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 13, cyto_nucl 11.5, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000585616 (
ENST00000481649
)
(Microtubule-associated protein 2; MAP-2;)
genome : 210,555,327 - 210,557,516 (2,190)
query : 1 - 414 (414/414)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11.5, extr 10, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000195008
(
M25668
)
(Microtubule-associated protein 2 isoform 2.)
genome : 210,558,374 - 210,570,404 (12,031)
query : 1 - 3,206 (3,206/3,206)
5 exons
identity = 0.999
5'(0.999;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013588 : MAP2/Tau projection
IPR027324 : Microtubule associated protein MAP2/MAP4/Tau
GO :
0008017 : Molecular Function : microtubule binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 16.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000028479
(
AL833567
)
(Microtubule-associated protein 2; MAP-2;)
genome : 210,559,525 - 210,598,835 (39,311)
query : 1 - 4,725 (4,725/4,743)
6 exons
identity = 0.997
5'(0.998;0.994;1.000;1.000;0.999;0.982)3'
coverage = 1.000
InterPro :
IPR001084 : Microtubule associated protein, tubulin-binding repeat
IPR013588 : MAP2/Tau projection
IPR027324 : Microtubule associated protein MAP2/MAP4/Tau
GO :
0008017 : Molecular Function : microtubule binding
0015631 : Molecular Function : tubulin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15.5, nucl 10, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000579833 (
ENST00000475600
)
(Microtubule-associated protein 2; MAP-2;)
genome : 210,561,038 - 210,590,516 (29,479)
query : 1 - 972 (972/989)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.983
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000568777 (
ENST00000464007
)
(Microtubule-associated protein 2; MAP-2;)
genome : 210,570,106 - 210,574,885 (4,780)
query : 1 - 594 (594/594)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, cyto 11, extr 10, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000582348 (
ENST00000478233
)
(Microtubule-associated protein 2 isoform 4.)
genome : 210,570,304 - 210,575,303 (5,000)
query : 1 - 814 (814/814)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, cyto 9, mito 6, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000216686
(
S76756
)
(Microtubule-associated protein 2; MAP-2;)
genome : 210,570,399 - 210,595,235 (24,837)
query : 1 - 1,012 (1,012/1,012)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001084 : Microtubule associated protein, tubulin-binding repeat
IPR027324 : Microtubule associated protein MAP2/MAP4/Tau
GO :
0008017 : Molecular Function : microtubule binding
0015631 : Molecular Function : tubulin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, nucl 3, cyto 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000577872 (
ENST00000473543
)
(Microtubule-associated protein 2; MAP-2;)
genome : 210,574,678 - 210,575,536 (859)
query : 1 - 450 (450/450)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, nucl 7.5, cyto_nucl 6, cyto 3.5, extr 2,
pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000067613
(
AF088065
)
(Hypothetical short protein.)
genome : 210,595,507 - 210,596,052 (546)
query : 1 - 546 (546/555)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000012288
(
AK055674
)
(Hypothetical short protein.)
genome : 210,596,067 - 210,598,599 (2,533)
query : 1 - 2,529 (2,529/2,529)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 5, cyto_nucl 5, extr 3, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0029807
HIT000012762
(
AK056148
)
(Hypothetical short protein.)
genome : 210,596,705 - 210,598,834 (2,130)
query : 1 - 2,124 (2,124/2,124)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 5, cyto_nucl 5, extr 3, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029807)
HIX0021745
HIT000318671 (
NM_182587
)
(Protein unc-80 homolog;)
genome : 210,636,717 - 210,864,024 (227,308)
query : 1 - 13,490 (13,490/13,490)
63 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021745)
HIX0021745
HIT000537392 (
ENST00000439458
)
(Protein unc-80 homolog;)
genome : 210,636,717 - 210,864,024 (227,308)
query : 1 - 13,562 (13,562/13,562)
64 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021745)
HIX0021745
HIT000562117 (
NM_032504
)
(Protein unc-80 homolog;)
genome : 210,636,717 - 210,864,024 (227,308)
query : 1 - 13,562 (13,562/13,562)
64 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021745)
HIX0021745
HIT000015682
(
AK090815
)
(Protein unc-80 homolog isoform 2.)
genome : 210,636,717 - 210,661,271 (24,555)
query : 1 - 2,771 (2,771/2,771)
8 exons
identity = 0.998
5'(1.000;1.000;0.994;0.997;1.000;1.000;0.993;
0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.8333, cyto 11.5, nucl 10,
cyto_pero 7.66667, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021745)
HIX0021745
HIT000582797 (
ENST00000478701
)
(Protein unc-80 homolog isoform 2.)
genome : 210,636,717 - 210,661,271 (24,555)
query : 1 - 2,771 (2,771/2,771)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_nucl 10.6667, cyto_pero 8.66667, nucl 8,
mito 7, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021745)
HIX0021745
HIT000500688
(
BC136690
)
(Protein unc-80 homolog isoform 2.)
genome : 210,636,746 - 210,660,391 (23,646)
query : 1 - 1,862 (1,862/1,862)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_nucl 10.6667, cyto_pero 8.66667, nucl 8,
mito 7, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021745)
HIX0021745
HIT000500691
(
BC136693
)
(Protein unc-80 homolog isoform 2.)
genome : 210,636,746 - 210,660,391 (23,646)
query : 1 - 1,862 (1,862/1,862)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_nucl 10.6667, cyto_pero 8.66667, nucl 8,
mito 7, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021745)
HIX0021745
HIT000110944 (
ENST00000272845
)
(Protein unc-80 homolog;)
genome : 210,636,763 - 210,861,282 (224,520)
query : 1 - 10,702 (10,702/10,702)
63 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021745)
HIX0200377
HIT000526521 (
ENST00000428587
)
(Conserved hypothetical protein.)
genome : 210,673,528 - 210,674,304 (777)
query : 1 - 777 (777/777)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200377)
HIX0200377
pHIT000005434 ( pHIT000005434 )
Representative transcript
(Conserved hypothetical protein.)
genome : 210,673,528 - 210,674,304 (777)
query : 1 - 777 (777/777)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200377)
CAGE tag :
H05BA04L1412
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC152602
Gallus
sp. (Chicken) : ENSGALT00000035982
Pongo
sp. (Orangutan) : ENSPPYT00000015268
Pan
sp. (Chimpanzee) : ENSPTRT00000023869
Macaca
sp. (Macaque) : XM_001102091
HIX0021745
HIT000001558
(
AB058746
)
Representative transcript
(Protein unc-80 homolog isoform 2.)
genome : 210,693,953 - 210,835,038 (141,086)
query : 1 - 8,010 (8,010/8,010)
37 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 5, plas 4.5, pero 3.5, extr_plas 3.5,
mito_pero 3, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021745)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK173273
Oryzias
sp. (Medaka) : ENSORLT00000003098
Pongo
sp. (Orangutan) : ENSPPYT00000015269
Tetraodon
sp. (Tetraodon) : GSTENT00015863001
Rattus
sp. (Rat) : XM_001053529
Macaca
sp. (Macaque) : XM_001102174
Monodelphis
sp. (Opossum) : XM_001364761
Equus
sp. (Horse) : XM_001914664
Danio
sp. (Zebrafish) : XM_001921097
Canis
sp. (Dog) : XM_545626
Bos
sp. (Cow) : XM_616749
Pan
sp. (Chimpanzee) : XR_023166
HIX0021745
HIT000592640 (
ENST00000489023
)
(Protein unc-80 homolog isoform 2.)
genome : 210,693,953 - 210,835,038 (141,086)
query : 1 - 8,010 (8,010/8,010)
37 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 5, plas 4.5, pero 3.5, extr_plas 3.5,
mito_pero 3, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021745)
HIX0021745
HIT000055275
(
BX640726
)
(Protein unc-80 homolog isoform 2.)
genome : 210,695,709 - 210,699,395 (3,687)
query : 1 - 3,686 (3,686/3,737)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 12, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021745)
HIX0021745
HIT000581454 (
ENST00000477301
)
(Protein unc-80 homolog isoform 2.)
genome : 210,709,829 - 210,737,598 (27,770)
query : 1 - 550 (550/550)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11, plas 7.5, cyto_pero 7.5, extr_plas 5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021745)
HIX0200377
pHIT000005434 ( pHIT000005434 )
Representative transcript
(Conserved hypothetical protein.)
genome : 210,673,528 - 210,674,304 (777)
query : 1 - 777 (777/777)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200377)
CAGE tag :
H04BA55F1605,H04BA58H0707,H04BA75K0603
H04BA93C1603,H05BA04L1412
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC152602
Gallus
sp. (Chicken) : ENSGALT00000035982
Pongo
sp. (Orangutan) : ENSPPYT00000015268
Pan
sp. (Chimpanzee) : ENSPTRT00000023869
Macaca
sp. (Macaque) : XM_001102091
AC012362.7
209200001-209324898 F +
NCBI
AC019185.8
209324899-209495050 F +
NCBI
AC079147.5
209495051-209575674 F +
NCBI
AC067944.5
209575675-209681773 F +
NCBI
AC109824.4
209681774-209773751 F +
NCBI
AC069205.6
209773752-209903993 F +
NCBI
AC013409.8
209903994-210099271 F +
NCBI
AC016743.10
210099272-210243426 F +
NCBI
AC019106.3
210243427-210441966 F +
NCBI
AC108072.3
210441967-210474753 F +
NCBI
AC079833.4
210474754-210547817 F +
NCBI
AC006385.3
210547818-210721125 F +
NCBI
AC006464.3
210721126-210800000 F +
NCBI