bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0162476
HIT000522196 (
ENST00000424262
)
(Ribosomal protein L7Ae/L30e/S12e/Gadd45 domain containing protein.)
genome : 9,221,524 - 9,221,856 (333)
query : 1 - 333 (333/333)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20, mito 11.5, E.R._mito 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162476)
HIX0203936
HIT000598940 (
ENST00000495580
)
(Hypothetical short protein.)
genome : 9,243,569 - 9,244,710 (1,142)
query : 1 - 418 (418/418)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 8, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203936)
HIX0203936
HIT000568102 (
ENST00000463302
)
(Hypothetical short protein.)
genome : 9,244,288 - 9,245,243 (956)
query : 1 - 547 (547/547)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 12, cyto 10, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203936)
HIX0024231
HIT000055122
(
BX538340
)
Representative transcript
(Conserved hypothetical protein.)
genome : 9,246,722 - 9,249,988 (3,267)
query : 1 - 3,267 (3,267/3,287)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 8, cyto 7, E.R._mito 5.83333, plas 5,
cyto_nucl 5, mito 4.5, mito_pero 3.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024231)
HIX0215078
HIT000678137 (
ENST00000565044
)
(Conserved hypothetical protein.)
genome : 9,246,722 - 9,249,994 (3,273)
query : 1 - 3,273 (3,273/3,273)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, nucl 6.5, cyto_nucl 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215078)
HIX0204190
HIT000595789 (
ENST00000492300
)
(Hypothetical short protein.)
genome : 9,255,326 - 9,257,013 (1,688)
query : 1 - 368 (368/368)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204190)
HIX0204140
HIT000578843 (
ENST00000474561
)
(Hypothetical short protein.)
genome : 9,283,295 - 9,286,235 (2,941)
query : 1 - 455 (455/455)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204140)
HIX0001806
HIT000200677 (
NM_003887
)
(Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2; Development and differentiation-enhancing factor 2; Paxillin-associated protein with ARF GAP activity 3; PAG3; Pyk2 C-terminus-associated protein; PAP;)
genome : 9,346,894 - 9,545,812 (198,919)
query : 1 - 5,717 (5,717/5,724)
28 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15.5, cyto 14.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001806)
HIX0001806
HIT000560077 (
NM_001135191
)
(Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform b.)
genome : 9,346,894 - 9,545,812 (198,919)
query : 1 - 5,582 (5,582/5,589)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001806)
HIX0001806
HIT000120448 (
ENST00000315273
)
(Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform b.)
genome : 9,346,894 - 9,545,812 (198,919)
query : 1 - 5,582 (5,582/5,582)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001806)
HIX0001806
HIT000112087 (
ENST00000281419
)
(Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2; Development and differentiation-enhancing factor 2; Paxillin-associated protein with ARF GAP activity 3; PAG3; Pyk2 C-terminus-associated protein; PAP;)
genome : 9,346,894 - 9,545,807 (198,914)
query : 1 - 5,712 (5,712/5,712)
28 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15.5, cyto 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001806)
HIX0001806
HIT000000117
(
AB007860
)
Representative transcript
(Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2; Development and differentiation-enhancing factor 2; Paxillin-associated protein with ARF GAP activity 3; PAG3; Pyk2 C-terminus-associated protein; PAP;)
genome : 9,346,894 - 9,545,806 (198,913)
query : 1 - 5,711 (5,711/5,711)
28 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.989;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15.5, cyto 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001806)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK147622
Danio
sp. (Zebrafish) : BC129209
Gallus
sp. (Chicken) : CR387820
Canis
sp. (Dog) : ENSCAFT00000005404
Equus
sp. (Horse) : ENSECAT00000026291
Oryzias
sp. (Medaka) : ENSORLT00000018983
Oryzias
sp. (Medaka) : ENSORLT00000022714
Pongo
sp. (Orangutan) : ENSPPYT00000014716
Pan
sp. (Chimpanzee) : ENSPTRT00000021685
Tetraodon
sp. (Tetraodon) : GSTENT00032178001
Takifugu
sp. (Fugu) : SINFRUT00000136346
Macaca
sp. (Macaque) : XM_001088227
Monodelphis
sp. (Opossum) : XM_001372002
Rattus
sp. (Rat) : XM_343039
Bos
sp. (Cow) : XM_870342
HIX0001806
HIT000260829
(
BC063308
)
(Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform b.)
genome : 9,346,941 - 9,545,807 (198,867)
query : 1 - 5,529 (5,529/5,544)
27 exons
identity = 0.999
5'(1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.989;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.996;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001164 : Arf GTPase activating protein
IPR001452 : SH3 domain
IPR001849 : Pleckstrin homology domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
IPR027267 : Arfaptin homology (AH) domain/BAR domain
GO :
0005515 : Molecular Function : protein binding
0008060 : Molecular Function : ARF GTPase activator activity
0008270 : Molecular Function : zinc ion binding
0032312 : Biological Process : regulation of ARF GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001806)
HIX0017871
HIT000008379
(
AK025105
)
Representative transcript
(Conserved hypothetical protein.)
genome : 9,361,941 - 9,396,292 (34,352)
query : 21 - 1,658 (1,638/1,674)
2 exons
identity = 0.992
3'(0.897;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 5, cyto 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017871)
HIX0001807
HIT000005694
(
AK022420
)
Representative transcript
(Conserved hypothetical protein.)
genome : 9,402,145 - 9,404,319 (2,175)
query : 1 - 2,133 (2,133/2,133)
2 exons
identity = 0.998
5'(1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 5, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001807)
HIX0204174
HIT000591231 (
ENST00000487533
)
(Translation initiation factor SUI1 domain containing protein.)
genome : 9,411,421 - 9,411,757 (337)
query : 1 - 337 (337/337)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 12, pero 3, nucl 2.5, extr 2,
cysk 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204174)
HIX0001806
HIT000576099 (
ENST00000471687
)
(Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2; Development and differentiation-enhancing factor 2; Paxillin-associated protein with ARF GAP activity 3; PAG3; Pyk2 C-terminus-associated protein; PAP;)
genome : 9,490,588 - 9,496,432 (5,845)
query : 1 - 611 (611/611)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, mito 10, extr 7, cyto_nucl 7, cyto_pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001806)
HIX0001806
HIT000043058
(
AK123185
)
(Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2; Development and differentiation-enhancing factor 2; Paxillin-associated protein with ARF GAP activity 3; PAG3; Pyk2 C-terminus-associated protein; PAP;)
genome : 9,495,064 - 9,497,305 (2,242)
query : 1 - 2,157 (2,157/2,157)
2 exons
identity = 0.999
5'(0.998;1.000)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 5.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001806)
HIX0001806
HIT000015988
(
AK091121
)
(Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform b.)
genome : 9,528,418 - 9,545,806 (17,389)
query : 12 - 3,123 (3,112/3,123)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 0.996
InterPro :
IPR001452 : SH3 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001806)
HIX0001806
HIT000594937 (
ENST00000491413
)
(Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform b.)
genome : 9,528,423 - 9,540,898 (12,476)
query : 1 - 497 (497/497)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 13, cyto 9, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001806)
HIX0001806
HIT000044773
(
AK124900
)
(Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2; Development and differentiation-enhancing factor 2; Paxillin-associated protein with ARF GAP activity 3; PAG3; Pyk2 C-terminus-associated protein; PAP;)
genome : 9,538,970 - 9,545,806 (6,837)
query : 1 - 3,870 (3,870/3,870)
4 exons
identity = 0.999
5'(0.998;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 5, pero 3, cyto 2, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001806)
HIX0001806
HIT000588432 (
ENST00000484590
)
(Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2; Development and differentiation-enhancing factor 2; Paxillin-associated protein with ARF GAP activity 3; PAG3; Pyk2 C-terminus-associated protein; PAP;)
genome : 9,538,970 - 9,545,806 (6,837)
query : 1 - 3,869 (3,869/3,869)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 5, pero 3, cyto 2, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001806)
HIX0001808
HIT000313992 (
ENST00000360635
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,543,604 - 9,563,358 (19,755)
query : 1 - 4,859 (4,859/4,859)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, mito 5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000062224
(
AF012023
)
Representative transcript
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,545,813 - 9,563,635 (17,823)
query : 1 - 1,417 (1,417/1,420)
8 exons
identity = 0.994
3'(0.995;0.991;1.000;1.000;1.000;1.000;1.000;
0.970)5'
coverage = 0.998
InterPro :
IPR006020 : PTB/PI domain
IPR019517 : Integrin binding protein, ICAP-1
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, mito 5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AJ001373
Bos
sp. (Cow) : BC103215
Danio
sp. (Zebrafish) : BC108035
Gallus
sp. (Chicken) : CR406232
Tetraodon
sp. (Tetraodon) : CR653309
Pongo
sp. (Orangutan) : CR860779
Macaca
sp. (Macaque) : ENSMMUT00000025334
Monodelphis
sp. (Opossum) : ENSMODT00000030458
Oryzias
sp. (Medaka) : ENSORLT00000019002
Pan
sp. (Chimpanzee) : ENSPTRT00000021692
Rattus
sp. (Rat) : XM_001070826
Equus
sp. (Horse) : XM_001503587
Canis
sp. (Dog) : XM_532868
HIX0001808
HIT000062225
(
AF012024
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,545,813 - 9,563,635 (17,823)
query : 1 - 1,267 (1,267/1,270)
7 exons
identity = 0.993
3'(0.995;0.991;1.000;1.000;1.000;1.000;0.970)5'
coverage = 0.998
InterPro :
IPR019517 : Integrin binding protein, ICAP-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, mito 8, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000309503 (
ENST00000355346
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,545,813 - 9,563,676 (17,864)
query : 1 - 1,963 (1,963/1,963)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, mito 5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000201497 (
NM_004763
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,545,813 - 9,563,643 (17,831)
query : 1 - 1,930 (1,930/1,930)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, mito 5, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000208670 (
NM_022334
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,545,813 - 9,563,643 (17,831)
query : 1 - 1,780 (1,780/1,780)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, mito 8, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000104813 (
ENST00000238091
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,545,813 - 9,563,635 (17,823)
query : 1 - 1,772 (1,772/1,772)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, mito 8, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000587667 (
ENST00000483795
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,545,823 - 9,563,585 (17,763)
query : 1 - 1,913 (1,913/1,913)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, mito 7, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000493641
(
AK299017
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,546,478 - 9,563,591 (17,114)
query : 1 - 1,019 (1,019/1,019)
5 exons
identity = 0.989
3'(0.980;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006020 : PTB/PI domain
IPR019517 : Integrin binding protein, ICAP-1
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 7, nucl 6, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000593986 (
ENST00000490426
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,546,478 - 9,563,591 (17,114)
query : 1 - 1,027 (1,027/1,027)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 7, nucl 6, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000422614
(
AK289817
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,546,492 - 9,563,611 (17,120)
query : 1 - 1,219 (1,219/1,219)
7 exons
identity = 0.995
3'(0.991;1.000;1.000;1.000;0.987;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006020 : PTB/PI domain
IPR019517 : Integrin binding protein, ICAP-1
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, mito 6, extr 3, cyto 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000055746
(
BX647099
)
(Integrin binding protein, ICAP-1 family protein.)
genome : 9,546,789 - 9,563,629 (16,841)
query : 1 - 862 (862/885)
6 exons
identity = 0.997
3'(0.996;1.000;1.000;1.000;0.981;1.000)5'
coverage = 1.000
InterPro :
IPR006020 : PTB/PI domain
IPR019517 : Integrin binding protein, ICAP-1
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 9, cyto_nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000600326 (
ENST00000497031
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,546,777 - 9,563,573 (16,797)
query : 1 - 560 (560/560)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 6, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000035735
(
BC012264
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,546,797 - 9,563,590 (16,794)
query : 1 - 893 (893/907)
7 exons
identity = 0.999
3'(1.000;0.993;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006020 : PTB/PI domain
IPR019517 : Integrin binding protein, ICAP-1
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, mito 5, extr 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000568989 (
ENST00000464228
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,546,789 - 9,563,629 (16,841)
query : 1 - 861 (861/861)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 12, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000018046
(
AK093179
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,546,790 - 9,563,379 (16,590)
query : 2 - 2,125 (2,124/2,125)
6 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR019517 : Integrin binding protein, ICAP-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, mito 5, extr 3, cyto 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000313200 (
ENST00000359712
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,546,790 - 9,563,379 (16,590)
query : 1 - 2,126 (2,126/2,126)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, mito 6, cyto 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000570220 (
ENST00000465527
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,546,790 - 9,552,846 (6,057)
query : 1 - 787 (787/787)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 5.5, mito_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000565636 (
ENST00000460720
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,546,790 - 9,548,428 (1,639)
query : 1 - 582 (582/582)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 11.5, extr 10, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000592100 (
ENST00000488451
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,546,796 - 9,563,609 (16,814)
query : 1 - 874 (874/874)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, mito 8, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000574977 (
ENST00000470507
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,546,943 - 9,548,533 (1,591)
query : 1 - 384 (384/384)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11.5, extr 7, nucl 3.5,
extr_plas 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000267856
(
CR457006
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,546,967 - 9,558,826 (11,860)
query : 1 - 599 (599/603)
6 exons
identity = 0.998
3'(1.000;1.000;0.989;1.000;1.000;1.000)5'
coverage = 0.993
InterPro :
IPR006020 : PTB/PI domain
IPR019517 : Integrin binding protein, ICAP-1
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, mito 5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000554847 (
ENST00000456913
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,547,159 - 9,563,559 (16,401)
query : 1 - 1,043 (1,043/1,043)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, mito 6, cyto 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000586714 (
ENST00000482798
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,547,672 - 9,562,695 (15,024)
query : 1 - 564 (564/564)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 11, nucl 7, mito 7, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000595577 (
ENST00000492079
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,547,701 - 9,560,423 (12,723)
query : 1 - 748 (748/748)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000567995 (
ENST00000463190
)
(Integrin beta-1-binding protein 1 isoform 2.)
genome : 9,548,131 - 9,563,651 (15,521)
query : 1 - 570 (570/570)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 10.5, nucl 9.5, extr 7, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000597959 (
ENST00000494563
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,548,281 - 9,563,305 (15,025)
query : 1 - 699 (699/699)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, mito 9, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000572210 (
ENST00000467606
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,552,398 - 9,563,216 (10,819)
query : 1 - 445 (445/445)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, mito 8, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000588572 (
ENST00000484735
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,552,426 - 9,563,469 (11,044)
query : 1 - 540 (540/540)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000564947 (
ENST00000460001
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,552,433 - 9,563,305 (10,873)
query : 1 - 663 (663/663)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001808
HIT000600399 (
ENST00000497105
)
(Integrin beta-1-binding protein 1; Integrin cytoplasmic domain-associated protein 1; ICAP-1;)
genome : 9,552,489 - 9,563,357 (10,869)
query : 1 - 659 (659/659)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, mito 6, extr 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001808)
HIX0001809
pHIT000072801 ( pHIT000072801 )
(Cleavage and polyadenylation specificity factor subunit 3; EC=3.1.27.-; Cleavage and polyadenylation specificity factor 73 kDa subunit; CPSF 73 kDa subunit; mRNA 3'-end-processing endonuclease CPSF-73;)
genome : 9,562,537 - 9,613,146 (50,610)
query : 1 - 2,181 (2,181/2,181)
18 exons
EC number :
EC 3.1.27.-
InterPro :
IPR001279 : Beta-lactamase-like
IPR011108 : RNA-metabolising metallo-beta-lactamase
IPR021718 : Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term
IPR022712 : Beta-Casp domain
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001809)
CAGE tag :
H34BA83L1704
HIX0001809
pHIT000099303 ( pHIT000099303 )
(Cleavage and polyadenylation specificity factor 73; EC=3.1.27.-;)
genome : 9,562,537 - 9,613,146 (50,610)
query : 1 - 1,938 (1,938/1,938)
16 exons
EC number :
EC 3.1.27.-
InterPro :
IPR001279 : Beta-lactamase-like
IPR011108 : RNA-metabolising metallo-beta-lactamase
IPR021718 : Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term
IPR022712 : Beta-Casp domain
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001809)
CAGE tag :
T02F0090A80F
HIX0001809
HIT000205953 (
NM_016207
)
(Cleavage and polyadenylation specificity factor subunit 3; EC=3.1.27.-; Cleavage and polyadenylation specificity factor 73 kDa subunit; CPSF 73 kDa subunit; mRNA 3'-end-processing endonuclease CPSF-73;)
genome : 9,563,666 - 9,613,239 (49,574)
query : 1 - 2,385 (2,385/2,401)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.27.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13, nucl 5.5, plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001809)
HIX0001809
HIT000104815 (
ENST00000238112
)
(Cleavage and polyadenylation specificity factor subunit 3; EC=3.1.27.-; Cleavage and polyadenylation specificity factor 73 kDa subunit; CPSF 73 kDa subunit; mRNA 3'-end-processing endonuclease CPSF-73;)
genome : 9,563,697 - 9,613,230 (49,534)
query : 1 - 2,345 (2,345/2,345)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.27.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13, nucl 5.5, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001809)
HIX0001809
HIT000092258
(
BC030988
)
(Cleavage and polyadenylation specificity factor subunit 3; EC=3.1.27.-; Cleavage and polyadenylation specificity factor 73 kDa subunit; CPSF 73 kDa subunit; mRNA 3'-end-processing endonuclease CPSF-73;)
genome : 9,563,780 - 9,599,743 (35,964)
query : 1 - 1,758 (1,758/1,787)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.27.-
InterPro :
IPR001279 : Beta-lactamase-like
IPR021718 : Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term
IPR022712 : Beta-Casp domain
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 12.5, nucl 3.5, E.R. 3, plas 2,
E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001809)
HIX0001809
HIT000579720 (
ENST00000475482
)
(Cleavage and polyadenylation specificity factor subunit 3; EC=3.1.27.-; Cleavage and polyadenylation specificity factor 73 kDa subunit; CPSF 73 kDa subunit; mRNA 3'-end-processing endonuclease CPSF-73;)
genome : 9,563,780 - 9,572,817 (9,038)
query : 1 - 871 (871/871)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.27.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13, nucl 4.5, mito 4, extr 2,
cysk 2, E.R._mito 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001809)
HIX0001809
HIT000493542
(
AK298918
)
(Beta-Casp domain containing protein.)
genome : 9,563,790 - 9,613,226 (49,437)
query : 1 - 1,965 (1,965/1,967)
16 exons
identity = 0.998
5'(1.000;1.000;1.000;0.992;0.993;1.000;0.994;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001279 : Beta-lactamase-like
IPR011108 : RNA-metabolising metallo-beta-lactamase
IPR021718 : Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term
IPR022712 : Beta-Casp domain
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 10.5, cyto_pero 7, E.R._mito 6.5,
nucl 4, plas 2, extr 2, extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001809)
HIX0001809
HIT000035353
(
BC011654
)
(Cleavage and polyadenylation specificity factor subunit 3; EC=3.1.27.-; Cleavage and polyadenylation specificity factor 73 kDa subunit; CPSF 73 kDa subunit; mRNA 3'-end-processing endonuclease CPSF-73;)
genome : 9,563,793 - 9,613,227 (49,435)
query : 1 - 2,246 (2,246/2,268)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.27.-
InterPro :
IPR001279 : Beta-lactamase-like
IPR011108 : RNA-metabolising metallo-beta-lactamase
IPR021718 : Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term
IPR022712 : Beta-Casp domain
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13, nucl 5.5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001809)
HIX0001809
HIT000038753
(
BC020211
)
Representative transcript
(Cleavage and polyadenylation specificity factor subunit 3; EC=3.1.27.-; Cleavage and polyadenylation specificity factor 73 kDa subunit; CPSF 73 kDa subunit; mRNA 3'-end-processing endonuclease CPSF-73;)
genome : 9,563,868 - 9,613,227 (49,360)
query : 1 - 2,171 (2,171/2,286)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.27.-
InterPro :
IPR001279 : Beta-lactamase-like
IPR011108 : RNA-metabolising metallo-beta-lactamase
IPR021718 : Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term
IPR022712 : Beta-Casp domain
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13, nucl 5.5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001809)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK158036
Danio
sp. (Zebrafish) : BC085402
Rattus
sp. (Rat) : BC099817
Pongo
sp. (Orangutan) : CR861432
Tetraodon
sp. (Tetraodon) : GSTENT00003449001
Takifugu
sp. (Fugu) : SINFRUT00000133946
Takifugu
sp. (Fugu) : SINFRUT00000134458
Bos
sp. (Cow) : X95906
Pan
sp. (Chimpanzee) : XM_001154317
Monodelphis
sp. (Opossum) : XM_001371960
Equus
sp. (Horse) : XM_001502466
Gallus
sp. (Chicken) : XM_419942
Canis
sp. (Dog) : XM_540075
Macaca
sp. (Macaque) : XR_010004
HIX0001809
HIT000331267
(
AK223487
)
(Cleavage and polyadenylation specificity factor subunit 3; EC=3.1.27.-; Cleavage and polyadenylation specificity factor 73 kDa subunit; CPSF 73 kDa subunit; mRNA 3'-end-processing endonuclease CPSF-73;)
genome : 9,563,868 - 9,613,220 (49,353)
query : 1 - 2,164 (2,164/2,164)
18 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.994;1.000;1.000;
0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.27.-
InterPro :
IPR001279 : Beta-lactamase-like
IPR011108 : RNA-metabolising metallo-beta-lactamase
IPR021718 : Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term
IPR022712 : Beta-Casp domain
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13, nucl 5.5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001809)
HIX0001809
HIT000072399
(
AF171877
)
(Cleavage and polyadenylation specificity factor subunit 3; EC=3.1.27.-; Cleavage and polyadenylation specificity factor 73 kDa subunit; CPSF 73 kDa subunit; mRNA 3'-end-processing endonuclease CPSF-73;)
genome : 9,563,888 - 9,613,150 (49,263)
query : 1 - 2,074 (2,074/2,074)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.27.-
InterPro :
IPR001279 : Beta-lactamase-like
IPR011108 : RNA-metabolising metallo-beta-lactamase
IPR021718 : Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term
IPR022712 : Beta-Casp domain
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13, nucl 5.5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001809)
HIX0001809
HIT000088280
(
BC014106
)
(Cleavage and polyadenylation specificity factor subunit 3; EC=3.1.27.-; Cleavage and polyadenylation specificity factor 73 kDa subunit; CPSF 73 kDa subunit; mRNA 3'-end-processing endonuclease CPSF-73;)
genome : 9,564,013 - 9,613,221 (49,209)
query : 1 - 3,157 (3,157/3,175)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.27.-
InterPro :
IPR001279 : Beta-lactamase-like
IPR011108 : RNA-metabolising metallo-beta-lactamase
IPR021718 : Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term
IPR022712 : Beta-Casp domain
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, E.R. 8, cyto_plas 8, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001809)
HIX0001809
HIT000565516 (
ENST00000460593
)
(Cleavage and polyadenylation specificity factor subunit 3; EC=3.1.27.-; Cleavage and polyadenylation specificity factor 73 kDa subunit; CPSF 73 kDa subunit; mRNA 3'-end-processing endonuclease CPSF-73;)
genome : 9,564,013 - 9,613,221 (49,209)
query : 1 - 3,157 (3,157/3,157)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.27.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, E.R. 8, cyto_plas 8, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001809)
HIX0001809
HIT000097682
(
BC043432
)
(Cleavage and polyadenylation specificity factor subunit 3; EC=3.1.27.-; Cleavage and polyadenylation specificity factor 73 kDa subunit; CPSF 73 kDa subunit; mRNA 3'-end-processing endonuclease CPSF-73;)
genome : 9,564,120 - 9,613,219 (49,100)
query : 1 - 3,048 (3,048/3,067)
18 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 3.1.27.-
InterPro :
IPR001279 : Beta-lactamase-like
IPR011108 : RNA-metabolising metallo-beta-lactamase
IPR021718 : Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term
IPR022712 : Beta-Casp domain
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, E.R. 8, cyto_plas 8, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001809)
HIX0001809
HIT000008714
(
AK025440
)
(Cleavage and polyadenylation specificity factor subunit 3; EC=3.1.27.-; Cleavage and polyadenylation specificity factor 73 kDa subunit; CPSF 73 kDa subunit; mRNA 3'-end-processing endonuclease CPSF-73;)
genome : 9,570,051 - 9,613,230 (43,180)
query : 10 - 2,035 (2,026/2,076)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.996
EC number :
EC 3.1.27.-
InterPro :
IPR001279 : Beta-lactamase-like
IPR011108 : RNA-metabolising metallo-beta-lactamase
IPR021718 : Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term
IPR022712 : Beta-Casp domain
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, E.R. 8, cyto_plas 8, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001809)
HIX0001809
HIT000062418
(
AF017269
)
(Cleavage and polyadenylation specificity factor subunit 3; EC=3.1.27.-; Cleavage and polyadenylation specificity factor 73 kDa subunit; CPSF 73 kDa subunit; mRNA 3'-end-processing endonuclease CPSF-73;)
genome : 9,572,656 - 9,593,142 (20,487)
query : 1 - 1,139 (1,139/1,139)
8 exons
identity = 0.997
5'(1.000;1.000;0.993;0.989;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.1.27.-
InterPro :
IPR001279 : Beta-lactamase-like
IPR011108 : RNA-metabolising metallo-beta-lactamase
IPR022712 : Beta-Casp domain
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 15, cyto 8.5, cyto_mito 6.5, mito 3.5, extr 1,
nucl 1, E.R. 1, lyso 1, golg 1, E.R._golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001809)
HIX0001809
HIT000593226 (
ENST00000489629
)
(Cleavage and polyadenylation specificity factor subunit 3; EC=3.1.27.-; Cleavage and polyadenylation specificity factor 73 kDa subunit; CPSF 73 kDa subunit; mRNA 3'-end-processing endonuclease CPSF-73;)
genome : 9,581,859 - 9,588,479 (6,621)
query : 1 - 547 (547/547)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.27.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 17, cyto_nucl 7.5, cyto 6.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001809)
HIX0001809
HIT000394761
(
EF036508
)
(Cleavage and polyadenylation specificity factor subunit 3; EC=3.1.27.-; Cleavage and polyadenylation specificity factor 73 kDa subunit; CPSF 73 kDa subunit; mRNA 3'-end-processing endonuclease CPSF-73;)
genome : 9,597,062 - 9,613,228 (16,167)
query : 1 - 534 (534/540)
5 exons
identity = 0.996
5'(1.000;1.000;1.000;0.990;0.995)3'
coverage = 0.989
EC number :
EC 3.1.27.-
InterPro :
IPR021718 : Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 17, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001809)
HIX0001809
HIT000593008 (
ENST00000489403
)
(Cleavage and polyadenylation specificity factor subunit 3; EC=3.1.27.-; Cleavage and polyadenylation specificity factor 73 kDa subunit; CPSF 73 kDa subunit; mRNA 3'-end-processing endonuclease CPSF-73;)
genome : 9,597,106 - 9,613,227 (16,122)
query : 1 - 688 (688/688)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.27.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 5, mito 5, mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001809)
HIX0001810
HIT000599915 (
ENST00000496603
)
(Isoamyl acetate-hydrolyzing esterase 1 homolog; EC=3.1.-.-;)
genome : 9,613,787 - 9,624,677 (10,891)
query : 1 - 670 (670/670)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001810)
HIX0001810
HIT000586826 (
ENST00000482918
)
(Isoamyl acetate-hydrolyzing esterase 1 homolog; EC=3.1.-.-;)
genome : 9,613,947 - 9,628,573 (14,627)
query : 1 - 863 (863/863)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 5.5, cyto_nucl 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001810)
HIX0001810
HIT000600744 (
ENST00000497473
)
(Isoamyl acetate-hydrolyzing esterase 1 homolog; EC=3.1.-.-;)
genome : 9,614,659 - 9,628,940 (14,282)
query : 1 - 1,266 (1,266/1,266)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 6, cyto 4.5, cyto_pero 4.5, mito 3.5,
E.R._mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001810)
HIX0001810
HIT000262833
(
BC067865
)
(Isoamyl acetate-hydrolyzing esterase 1 homolog; EC=3.1.-.-;)
genome : 9,614,668 - 9,628,586 (13,919)
query : 7 - 824 (818/852)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.992
EC number :
EC 3.1.-.-
InterPro :
IPR001087 : GDSL lipase/esterase
GO :
0006629 : Biological Process : lipid metabolic process
0016788 : Molecular Function : hydrolase activity, acting on ester bonds
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001810)
HIX0001810
HIT000575366 (
ENST00000470914
)
(Isoamyl acetate-hydrolyzing esterase 1 homolog; EC=3.1.-.-;)
genome : 9,614,666 - 9,629,855 (15,190)
query : 1 - 2,121 (2,121/2,137)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, extr 7, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001810)
HIX0001810
HIT000089873
(
BC019061
)
(Isoamyl acetate-hydrolyzing esterase 1 homolog; EC=3.1.-.-;)
genome : 9,614,666 - 9,628,591 (13,926)
query : 1 - 857 (857/874)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
InterPro :
IPR001087 : GDSL lipase/esterase
GO :
0006629 : Biological Process : lipid metabolic process
0016788 : Molecular Function : hydrolase activity, acting on ester bonds
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, extr 7, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001810)
HIX0001810
HIT000595716 (
ENST00000492223
)
(Isoamyl acetate-hydrolyzing esterase 1 homolog; EC=3.1.-.-;)
genome : 9,614,668 - 9,628,586 (13,919)
query : 1 - 818 (818/818)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 5.5, cyto_nucl 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001810)
HIX0001810
HIT000339848
(
BC111025
)
(Isoamyl acetate-hydrolyzing esterase 1 homolog; EC=3.1.-.-;)
genome : 9,614,670 - 9,628,591 (13,922)
query : 1 - 906 (906/951)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
InterPro :
IPR001087 : GDSL lipase/esterase
GO :
0006629 : Biological Process : lipid metabolic process
0016788 : Molecular Function : hydrolase activity, acting on ester bonds
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 6, cyto 4.5, cyto_pero 4.5, mito 3.5,
E.R._mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001810)
HIX0001810
HIT000366473 (
NM_001039613
)
(Isoamyl acetate-hydrolyzing esterase 1 homolog; EC=3.1.-.-;)
genome : 9,614,670 - 9,628,591 (13,922)
query : 1 - 906 (906/951)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 6, cyto 4.5, cyto_pero 4.5, mito 3.5,
E.R._mito 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001810)
HIX0001810
HIT000260009
(
BC059410
)
(Isoamyl acetate-hydrolyzing esterase 1 homolog; EC=3.1.-.-;)
genome : 9,614,683 - 9,629,855 (15,173)
query : 1 - 2,108 (2,108/2,124)
5 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;0.994)3'
coverage = 0.999
EC number :
EC 3.1.-.-
InterPro :
IPR001087 : GDSL lipase/esterase
GO :
0006629 : Biological Process : lipid metabolic process
0016788 : Molecular Function : hydrolase activity, acting on ester bonds
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, extr 12, mito_pero 7.5, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001810)
HIX0001810
HIT000424781
(
AK291984
)
Representative transcript
(Isoamyl acetate-hydrolyzing esterase 1 homolog; EC=3.1.-.-;)
genome : 9,614,691 - 9,628,940 (14,250)
query : 1 - 1,234 (1,234/1,234)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
InterPro :
IPR001087 : GDSL lipase/esterase
GO :
0006629 : Biological Process : lipid metabolic process
0016788 : Molecular Function : hydrolase activity, acting on ester bonds
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 6, cyto 4.5, cyto_pero 4.5, mito 3.5,
E.R._mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001810)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC060949
Danio
sp. (Zebrafish) : BC095279
Bos
sp. (Cow) : BC103252
Gallus
sp. (Chicken) : BX931783
Tetraodon
sp. (Tetraodon) : CR689130
Oryzias
sp. (Medaka) : ENSORLT00000019206
Pongo
sp. (Orangutan) : ENSPPYT00000014712
Takifugu
sp. (Fugu) : SINFRUT00000134454
Macaca
sp. (Macaque) : XM_001084501
Pan
sp. (Chimpanzee) : XM_001155422
Monodelphis
sp. (Opossum) : XM_001381138
Equus
sp. (Horse) : XM_001502451
Canis
sp. (Dog) : XM_846956
HIX0001810
HIT000095886
(
BC039709
)
(Isoamyl acetate-hydrolyzing esterase 1 homolog; EC=3.1.-.-;)
genome : 9,614,691 - 9,628,751 (14,061)
query : 1 - 1,045 (1,045/1,125)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 3.1.-.-
InterPro :
IPR001087 : GDSL lipase/esterase
GO :
0006629 : Biological Process : lipid metabolic process
0016788 : Molecular Function : hydrolase activity, acting on ester bonds
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 6, cyto 4.5, cyto_pero 4.5, mito 3.5,
E.R._mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001810)
HIX0001810
HIT000017849
(
AK092982
)
(Isoamyl acetate-hydrolyzing esterase 1 homolog; EC=3.1.-.-;)
genome : 9,614,693 - 9,626,958 (12,266)
query : 1 - 2,793 (2,793/2,793)
4 exons
identity = 0.996
5'(1.000;0.993;1.000;0.995)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001810)
HIX0001810
HIT000598428 (
ENST00000495050
)
(Isoamyl acetate-hydrolyzing esterase 1 homolog; EC=3.1.-.-;)
genome : 9,614,693 - 9,626,958 (12,266)
query : 1 - 2,793 (2,793/2,793)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001810)
HIX0001810
HIT000492272
(
AK297648
)
(Isoamyl acetate-hydrolyzing esterase 1 homolog; EC=3.1.-.-;)
genome : 9,614,704 - 9,636,672 (21,969)
query : 1 - 1,137 (1,137/1,137)
7 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;0.994;0.987)3'
coverage = 1.000
EC number :
EC 3.1.-.-
InterPro :
IPR001087 : GDSL lipase/esterase
GO :
0006629 : Biological Process : lipid metabolic process
0016788 : Molecular Function : hydrolase activity, acting on ester bonds
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 5.5, cyto_nucl 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001810)
HIX0001810
HIT000585341 (
ENST00000481367
)
(Isoamyl acetate-hydrolyzing esterase 1 homolog; EC=3.1.-.-;)
genome : 9,614,704 - 9,636,672 (21,969)
query : 1 - 1,137 (1,137/1,137)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 5.5, cyto_nucl 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001810)
HIX0001810
HIT000644647 (
ENST00000545602
)
(Isoamyl acetate-hydrolyzing esterase 1 homolog; EC=3.1.-.-;)
genome : 9,614,704 - 9,636,672 (21,969)
query : 1 - 1,137 (1,137/1,137)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 5.5, cyto_nucl 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001810)
HIX0001810
HIT000308138 (
ENST00000351760
)
(Isoamyl acetate-hydrolyzing esterase 1 homolog; EC=3.1.-.-;)
genome : 9,614,707 - 9,628,591 (13,885)
query : 1 - 837 (837/837)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 5.5, cyto_nucl 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001810)
HIX0001810
HIT000585654 (
ENST00000481688
)
(Isoamyl acetate-hydrolyzing esterase 1 homolog; EC=3.1.-.-;)
genome : 9,614,987 - 9,628,443 (13,457)
query : 1 - 1,011 (1,011/1,011)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 12, cyto 12, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001810)
HIX0001810
HIT000593070 (
ENST00000489468
)
(Isoamyl acetate-hydrolyzing esterase 1 homolog; EC=3.1.-.-;)
genome : 9,615,151 - 9,628,366 (13,216)
query : 1 - 792 (792/792)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 6, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001810)
HIX0001810
HIT000599151 (
ENST00000495797
)
(Isoamyl acetate-hydrolyzing esterase 1 homolog; EC=3.1.-.-;)
genome : 9,615,184 - 9,624,596 (9,413)
query : 1 - 478 (478/478)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 8, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001810)
HIX0001810
HIT000598855 (
ENST00000495494
)
(Isoamyl acetate-hydrolyzing esterase 1 homolog; EC=3.1.-.-;)
genome : 9,615,803 - 9,624,641 (8,839)
query : 1 - 758 (758/758)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 6, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001810)
HIX0001810
HIT000591536 (
ENST00000487850
)
(Isoamyl acetate-hydrolyzing esterase 1 homolog; EC=3.1.-.-;)
genome : 9,621,000 - 9,628,624 (7,625)
query : 1 - 663 (663/663)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 5.5, cyto_nucl 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001810)
HIX0001810
HIT000588656 (
ENST00000484826
)
(Isoamyl acetate-hydrolyzing esterase 1 homolog; EC=3.1.-.-;)
genome : 9,621,413 - 9,628,751 (7,339)
query : 1 - 759 (759/759)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 5.5, cyto_nucl 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001810)
HIX0214932
HIT000081548
(
AK074513
)
Representative transcript
(Conserved hypothetical protein.)
genome : 9,624,785 - 9,626,958 (2,174)
query : 1 - 2,174 (2,174/2,174)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214932)
HIX0001810
HIT000594171 (
ENST00000490621
)
(Isoamyl acetate-hydrolyzing esterase 1 homolog; EC=3.1.-.-;)
genome : 9,628,274 - 9,629,158 (885)
query : 1 - 300 (300/300)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11.5, cyto 10.5, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001810)
HIX0029904
HIT000118834 (
ENST00000310823
)
(Disintegrin and metalloproteinase domain-containing protein 17; ADAM 17; EC=3.4.24.86; Snake venom-like protease; TNF-alpha convertase; TNF-alpha-converting enzyme; AltName: CD_antigen=CD156b; Precursor;)
genome : 9,628,615 - 9,695,917 (67,303)
query : 1 - 4,349 (4,349/4,349)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.86
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, pero 6, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029904)
HIX0029904
HIT000200041 (
NM_003183
)
(Disintegrin and metalloproteinase domain-containing protein 17; ADAM 17; EC=3.4.24.86; Snake venom-like protease; TNF-alpha convertase; TNF-alpha-converting enzyme; AltName: CD_antigen=CD156b; Precursor;)
genome : 9,629,412 - 9,695,917 (66,506)
query : 1 - 3,552 (3,552/3,572)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.86
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, pero 6, E.R. 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029904)
HIX0029904
HIT000648047
(
GQ402545
)
Representative transcript
(Disintegrin and metalloproteinase domain-containing protein 17; ADAM 17; EC=3.4.24.86; Snake venom-like protease; TNF-alpha convertase; TNF-alpha-converting enzyme; AltName: CD_antigen=CD156b; Precursor;)
genome : 9,629,400 - 9,695,917 (66,518)
query : 1 - 3,564 (3,564/3,572)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
EC number :
EC 3.4.24.86
InterPro :
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR002870 : Peptidase M12B, propeptide
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, pero 6, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029904)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AJ012603
Gallus
sp. (Chicken) : AJ719841
Mus
sp. (Mouse) : AK144161
Danio
sp. (Zebrafish) : BC057410
Oryzias
sp. (Medaka) : ENSORLT00000019188
Oryzias
sp. (Medaka) : ENSORLT00000022680
Pongo
sp. (Orangutan) : ENSPPYT00000014711
Pan
sp. (Chimpanzee) : ENSPTRT00000021697
Tetraodon
sp. (Tetraodon) : GSTENT00003450001
Tetraodon
sp. (Tetraodon) : GSTENT00032183001
Takifugu
sp. (Fugu) : SINFRUT00000133945
Takifugu
sp. (Fugu) : SINFRUT00000134452
Monodelphis
sp. (Opossum) : XM_001381134
Bos
sp. (Cow) : XM_595713
Danio
sp. (Zebrafish) : XM_684055
Macaca
sp. (Macaque) : XR_010036
HIX0029904
HIT000222630
(
U92649
)
(Disintegrin and metalloproteinase domain-containing protein 17; ADAM 17; EC=3.4.24.86; Snake venom-like protease; TNF-alpha convertase; TNF-alpha-converting enzyme; AltName: CD_antigen=CD156b; Precursor;)
genome : 9,629,413 - 9,695,898 (66,486)
query : 1 - 3,523 (3,523/3,523)
19 exons
identity = 0.994
3'(0.985;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.86
InterPro :
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR002870 : Peptidase M12B, propeptide
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, pero 6, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029904)
HIX0029904
HIT000500772
(
BC136783
)
(Disintegrin and metalloproteinase domain-containing protein 17; ADAM 17; EC=3.4.24.86; Snake venom-like protease; TNF-alpha convertase; TNF-alpha-converting enzyme; AltName: CD_antigen=CD156b; Precursor;)
genome : 9,629,462 - 9,695,811 (66,350)
query : 1 - 3,389 (3,389/3,389)
19 exons
identity = 0.996
3'(0.990;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.86
InterPro :
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR002870 : Peptidase M12B, propeptide
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, pero 6, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029904)
HIX0029904
HIT000221077
(
U69611
)
(Disintegrin and metalloproteinase domain-containing protein 17; ADAM 17; EC=3.4.24.86; Snake venom-like protease; TNF-alpha convertase; TNF-alpha-converting enzyme; AltName: CD_antigen=CD156b; Precursor;)
genome : 9,629,881 - 9,695,848 (65,968)
query : 1 - 3,014 (3,014/3,014)
19 exons
identity = 0.998
3'(0.995;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.86
InterPro :
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR002870 : Peptidase M12B, propeptide
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, pero 6, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029904)
HIX0029904
HIT000221078
(
U69612
)
(Disintegrin and metalloproteinase domain-containing protein 17; ADAM 17; EC=3.4.24.86; Snake venom-like protease; TNF-alpha convertase; TNF-alpha-converting enzyme; AltName: CD_antigen=CD156b; Precursor;)
genome : 9,629,975 - 9,695,856 (65,882)
query : 1 - 2,877 (2,877/2,877)
18 exons
identity = 0.998
3'(0.996;0.989;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.86
InterPro :
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR002870 : Peptidase M12B, propeptide
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, pero 6.5, E.R. 5, mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029904)
HIX0029904
HIT000221983
(
U86755
)
(Disintegrin and metalloproteinase domain-containing protein 17; ADAM 17; EC=3.4.24.86; Snake venom-like protease; TNF-alpha convertase; TNF-alpha-converting enzyme; AltName: CD_antigen=CD156b; Precursor;)
genome : 9,630,007 - 9,695,897 (65,891)
query : 1 - 2,942 (2,942/2,942)
19 exons
identity = 0.994
3'(0.971;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.86
InterPro :
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR002870 : Peptidase M12B, propeptide
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, pero 6, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029904)
HIX0029904
pHIT000003771 ( pHIT000003771 )
(Disintegrin and metalloproteinase domain-containing protein 17; ADAM 17; EC=3.4.24.86; Snake venom-like protease; TNF-alpha convertase; TNF-alpha-converting enzyme; AltName: CD_antigen=CD156b; Precursor;)
genome : 9,630,306 - 9,713,076 (82,771)
query : 1 - 2,019 (2,019/2,019)
15 exons
EC number :
EC 3.4.24.86
InterPro :
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029904)
CAGE tag :
H08BA16H1710
HIX0029904
HIT000254395
(
AY422721
)
(Disintegrin and metalloproteinase domain-containing protein 17; ADAM 17; EC=3.4.24.86; Snake venom-like protease; TNF-alpha convertase; TNF-alpha-converting enzyme; AltName: CD_antigen=CD156b; Precursor;)
genome : 9,630,309 - 9,695,741 (65,433)
query : 1 - 509 (509/509)
3 exons
identity = 0.996
3'(0.997;0.985;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.86
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, mito_pero 14.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029904)
HIX0024025
HIT000043151
(
AK123278
)
Representative transcript
(Conserved hypothetical protein.)
genome : 9,637,863 - 9,640,669 (2,807)
query : 1 - 2,795 (2,795/2,795)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 12, nucl 10, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024025)
HIX0203954
HIT000576988 (
ENST00000472619
)
(Hypothetical short protein.)
genome : 9,645,574 - 9,652,541 (6,968)
query : 1 - 262 (262/262)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203954)
HIX0203954
HIT000584761 (
ENST00000480764
)
(Hypothetical short protein.)
genome : 9,645,574 - 9,652,541 (6,968)
query : 1 - 491 (491/491)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203954)
HIX0029904
HIT000435522
(
BC146658
)
(Disintegrin and metalloproteinase domain-containing protein 17; ADAM 17; EC=3.4.24.86; Snake venom-like protease; TNF-alpha convertase; TNF-alpha-converting enzyme; AltName: CD_antigen=CD156b; Precursor;)
genome : 9,661,726 - 9,695,921 (34,196)
query : 1 - 1,883 (1,883/1,932)
8 exons
identity = 0.996
3'(0.999;1.000;0.951;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.86
InterPro :
IPR002870 : Peptidase M12B, propeptide
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029904)
HIX0029904
HIT000600427 (
ENST00000497134
)
(Disintegrin and metalloproteinase domain-containing protein 17; ADAM 17; EC=3.4.24.86; Snake venom-like protease; TNF-alpha convertase; TNF-alpha-converting enzyme; AltName: CD_antigen=CD156b; Precursor;)
genome : 9,661,725 - 9,695,921 (34,197)
query : 1 - 1,873 (1,873/1,873)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.86
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, pero 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029904)
HIX0029904
HIT000422626
(
AK289829
)
(Disintegrin and metalloproteinase domain-containing protein 17; ADAM 17; EC=3.4.24.86; Snake venom-like protease; TNF-alpha convertase; TNF-alpha-converting enzyme; AltName: CD_antigen=CD156b; Precursor;)
genome : 9,666,275 - 9,695,884 (29,610)
query : 1 - 888 (888/888)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.86
InterPro :
IPR002870 : Peptidase M12B, propeptide
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0006508 : Biological Process : proteolysis
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029904)
HIX0029904
HIT000260578
(
BC062687
)
(Disintegrin and metalloproteinase domain-containing protein 17; ADAM 17; EC=3.4.24.86; Snake venom-like protease; TNF-alpha convertase; TNF-alpha-converting enzyme; AltName: CD_antigen=CD156b; Precursor;)
genome : 9,667,632 - 9,695,903 (28,272)
query : 1 - 1,071 (1,071/1,101)
5 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;0.996)5'
coverage = 1.000
EC number :
EC 3.4.24.86
InterPro :
IPR002870 : Peptidase M12B, propeptide
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0006508 : Biological Process : proteolysis
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029904)
HIX0029904
HIT000582178 (
ENST00000478059
)
(Disintegrin and metalloproteinase domain-containing protein 17; ADAM 17; EC=3.4.24.86; Snake venom-like protease; TNF-alpha convertase; TNF-alpha-converting enzyme; AltName: CD_antigen=CD156b; Precursor;)
genome : 9,667,630 - 9,695,903 (28,274)
query : 1 - 1,073 (1,073/1,073)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.86
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029904)
HIX0029798
HIT000259152
(
BC050601
)
(14-3-3 protein theta; 14-3-3 protein T-cell; 14-3-3 protein tau; Protein HS1;)
genome : 9,724,106 - 9,770,591 (46,486)
query : 1 - 2,057 (2,057/2,071)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000308 : 14-3-3 protein
IPR023409 : 14-3-3 protein, conserved site
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 3, pero 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029798)
HIX0029798
HIT000104812 (
ENST00000238081
)
(14-3-3 protein theta; 14-3-3 protein T-cell; 14-3-3 protein tau; Protein HS1;)
genome : 9,724,101 - 9,771,143 (47,043)
query : 1 - 2,208 (2,208/2,208)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 3, pero 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029798)
HIX0029798
HIT000363122 (
ENST00000381844
)
(14-3-3 protein theta; 14-3-3 protein T-cell; 14-3-3 protein tau; Protein HS1;)
genome : 9,724,101 - 9,770,745 (46,645)
query : 1 - 2,216 (2,216/2,216)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 3, pero 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029798)
HIX0029798
HIT000203394 (
NM_006826
)
(14-3-3 protein theta; 14-3-3 protein T-cell; 14-3-3 protein tau; Protein HS1;)
genome : 9,724,106 - 9,771,106 (47,001)
query : 1 - 2,166 (2,166/2,166)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 3, pero 2, mito_nucl 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029798)
HIX0029798
HIT000065723
(
AF070556
)
(14-3-3 protein theta; 14-3-3 protein T-cell; 14-3-3 protein tau; Protein HS1;)
genome : 9,724,396 - 9,770,367 (45,972)
query : 1 - 1,544 (1,544/1,564)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000308 : 14-3-3 protein
IPR023409 : 14-3-3 protein, conserved site
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, cyto_nucl 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029798)
HIX0029798
HIT000322081
(
X57347
)
(14-3-3 protein theta; 14-3-3 protein T-cell; 14-3-3 protein tau; Protein HS1;)
genome : 9,724,396 - 9,770,665 (46,270)
query : 17 - 1,856 (1,840/1,874)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 0.991
InterPro :
IPR000308 : 14-3-3 protein
IPR023409 : 14-3-3 protein, conserved site
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 3, pero 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029798)
HIX0029798
HIT000259592
(
BC056867
)
Representative transcript
(14-3-3 protein theta; 14-3-3 protein T-cell; 14-3-3 protein tau; Protein HS1;)
genome : 9,724,396 - 9,771,113 (46,718)
query : 1 - 1,889 (1,889/1,904)
6 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.984;0.977)5'
coverage = 1.000
InterPro :
IPR000308 : 14-3-3 protein
IPR023409 : 14-3-3 protein, conserved site
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 3, pero 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029798)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ719453
Danio
sp. (Zebrafish) : BC044412
Danio
sp. (Zebrafish) : BC048068
Mus
sp. (Mouse) : BC085299
Bos
sp. (Cow) : BC102840
Pongo
sp. (Orangutan) : CR857905
Rattus
sp. (Rat) : D17614
Oryzias
sp. (Medaka) : ENSORLT00000003694
Tetraodon
sp. (Tetraodon) : GSTENT00006809001
Takifugu
sp. (Fugu) : SINFRUT00000170933
Monodelphis
sp. (Opossum) : XM_001381126
Equus
sp. (Horse) : XM_001503580
Pan
sp. (Chimpanzee) : XM_525684
Canis
sp. (Dog) : XM_532871
Macaca
sp. (Macaque) : XR_010083
HIX0029798
HIT000322023
(
X56468
)
(14-3-3 protein theta; 14-3-3 protein T-cell; 14-3-3 protein tau; Protein HS1;)
genome : 9,724,419 - 9,771,106 (46,688)
query : 1 - 1,862 (1,862/1,862)
6 exons
identity = 0.995
3'(0.997;1.000;1.000;1.000;0.984;1.000)5'
coverage = 1.000
InterPro :
IPR000308 : 14-3-3 protein
IPR023409 : 14-3-3 protein, conserved site
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 3, pero 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029798)
HIX0029798
HIT000334510
(
BC093019
)
(14-3-3 protein theta; 14-3-3 protein T-cell; 14-3-3 protein tau; Protein HS1;)
genome : 9,724,744 - 9,771,126 (46,383)
query : 1 - 1,548 (1,548/1,564)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000308 : 14-3-3 protein
IPR023409 : 14-3-3 protein, conserved site
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 3, pero 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029798)
HIX0029798
HIT000428328
(
AK309462
)
(14-3-3 protein theta; 14-3-3 protein T-cell; 14-3-3 protein tau; Protein HS1;)
genome : 9,724,734 - 9,771,130 (46,397)
query : 1 - 1,445 (1,445/1,445)
6 exons
identity = 0.994
3'(1.000;1.000;1.000;1.000;1.000;0.896)5'
coverage = 1.000
InterPro :
IPR000308 : 14-3-3 protein
IPR023409 : 14-3-3 protein, conserved site
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 16, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029798)
HIX0029798
HIT000496832
(
AK302208
)
(14-3-3 protein theta; 14-3-3 protein T-cell; 14-3-3 protein tau; Protein HS1;)
genome : 9,724,824 - 9,771,126 (46,303)
query : 2 - 1,232 (1,231/1,232)
6 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;0.882)5'
coverage = 0.999
InterPro :
IPR000308 : 14-3-3 protein
IPR023409 : 14-3-3 protein, conserved site
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 10.5, mito 9, extr 3, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029798)
HIX0029798
HIT000492248
(
AK297624
)
(14-3-3 protein theta; 14-3-3 protein T-cell; 14-3-3 protein tau; Protein HS1;)
genome : 9,725,103 - 9,771,120 (46,018)
query : 3 - 1,080 (1,078/1,080)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR000308 : 14-3-3 protein
IPR023409 : 14-3-3 protein, conserved site
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 14.5, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029798)
HIX0029798
HIT000499771
(
AK316158
)
(14-3-3 protein theta; 14-3-3 protein T-cell; 14-3-3 protein tau; Protein HS1;)
genome : 9,725,208 - 9,771,101 (45,894)
query : 1 - 970 (970/970)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000308 : 14-3-3 protein
IPR023409 : 14-3-3 protein, conserved site
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029798)
HIX0029798
HIT000578993 (
ENST00000474715
)
(14-3-3 protein theta; 14-3-3 protein T-cell; 14-3-3 protein tau; Protein HS1;)
genome : 9,725,210 - 9,760,830 (35,621)
query : 1 - 709 (709/709)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 8.5, cyto_nucl 7, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029798)
HIX0029798
HIT000266777
(
BT020014
)
(14-3-3 protein theta; 14-3-3 protein T-cell; 14-3-3 protein tau; Protein HS1;)
genome : 9,725,416 - 9,770,581 (45,166)
query : 1 - 737 (737/738)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;0.992;1.000)5'
coverage = 0.999
InterPro :
IPR000308 : 14-3-3 protein
IPR023409 : 14-3-3 protein, conserved site
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 3, pero 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029798)
HIX0029798
HIT000544553 (
ENST00000446619
)
(14-3-3 protein theta; 14-3-3 protein T-cell; 14-3-3 protein tau; Protein HS1;)
genome : 9,728,427 - 9,771,075 (42,649)
query : 1 - 665 (665/665)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029798)
HIX0029798
HIT000565034 (
ENST00000460093
)
(14-3-3 protein theta; 14-3-3 protein T-cell; 14-3-3 protein tau; Protein HS1;)
genome : 9,768,832 - 9,770,397 (1,566)
query : 1 - 345 (345/345)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029798)
HIX0030326
HIT000095781
(
BC039518
)
Representative transcript
(Conserved hypothetical protein.)
genome : 9,778,901 - 9,789,566 (10,666)
query : 1 - 830 (830/862)
3 exons
identity = 0.999
5'(1.000;0.989;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 11.5, cyto 10.5, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030326)
HIX0030326
HIT000582573 (
ENST00000478468
)
(Conserved hypothetical protein.)
genome : 9,778,901 - 9,789,568 (10,668)
query : 1 - 832 (832/832)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 11.5, cyto 10.5, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030326)
HIX0204162
HIT000586929 (
ENST00000483023
)
(Hypothetical protein.)
genome : 9,814,152 - 9,848,542 (34,391)
query : 1 - 1,852 (1,852/1,852)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 8, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204162)
HIX0204202
HIT000600138 (
ENST00000496833
)
(Conserved hypothetical protein.)
genome : 9,886,833 - 9,886,998 (166)
query : 1 - 166 (166/166)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 9.5, mito 9, cyto 4.5,
E.R._mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204202)
HIX0001811
HIT000019431
(
AK094576
)
Representative transcript
(Conserved hypothetical protein.)
genome : 9,897,625 - 9,910,470 (12,846)
query : 1 - 1,946 (1,946/1,946)
2 exons
identity = 0.997
3'(0.997;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 7.5, cyto 7, cyto_pero 6, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001811)
HIX0001811
HIT000578947 (
ENST00000474667
)
(Hypothetical protein.)
genome : 9,897,625 - 9,910,470 (12,846)
query : 1 - 1,947 (1,947/1,947)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto 9.5, cyto_nucl 7.5, mito 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001811)
HIX0001812
HIT000108977 (
ENST00000263663
)
(Transcription initiation factor Rrn7 domain containing protein.)
genome : 9,983,483 - 10,074,545 (91,063)
query : 1 - 2,387 (2,387/2,387)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, E.R. 9, nucl 5, cyto_golg 5, pero 4.5,
E.R._golg 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001812)
HIX0001812
HIT000193427
(
L39061
)
(TATA box-binding protein-associated factor RNA polymerase I subunit B.)
genome : 9,983,572 - 10,059,985 (76,414)
query : 3 - 1,703 (1,701/1,703)
14 exons
identity = 0.993
5'(0.950;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.986;0.983;1.000;1.000;1.000;0.996)3'
coverage = 0.999
InterPro :
IPR021752 : Transcription initiation factor Rrn7
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R._mito 10, cyto 9.5, E.R. 9, mito 6.5,
cyto_pero 6.5, mito_pero 6.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001812)
HIX0001812
HIT000202352 (
NM_005680
)
(Transcription initiation factor Rrn7 domain containing protein.)
genome : 9,983,571 - 10,074,545 (90,975)
query : 1 - 2,299 (2,299/2,306)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.986;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.997
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, E.R. 9, nucl 5, cyto_golg 5, pero 4.5,
E.R._golg 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001812)
HIX0001812
HIT000038290
(
BC018137
)
Representative transcript
(TATA box-binding protein-associated factor RNA polymerase I subunit B; RNA polymerase I-specific TBP-associated factor 63 kDa; TAFI63; TATA box-binding protein-associated factor 1B; TBP-associated factor 1B; Transcription initiation factor SL1/TIF-IB subunit B;)
genome : 9,983,573 - 10,074,537 (90,965)
query : 1 - 2,290 (2,290/2,307)
15 exons
identity = 0.997
5'(0.983;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.986;0.989;1.000;1.000;1.000;0.996;
0.998)3'
coverage = 1.000
InterPro :
IPR021752 : Transcription initiation factor Rrn7
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, E.R. 9, nucl 5, cyto_golg 5, pero 4.5,
E.R._golg 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001812)
HIX0001812
HIT000428617
(
AK309751
)
(TATA box-binding protein-associated factor RNA polymerase I subunit B.)
genome : 9,983,589 - 10,053,714 (70,126)
query : 1 - 1,690 (1,690/1,690)
12 exons
identity = 0.995
5'(0.980;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.986;0.983;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR021752 : Transcription initiation factor Rrn7
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 20, mito 4.5, cyto_mito 3.5, E.R. 3, cyto 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001812)
HIX0001812
HIT000504004 (
ENST00000402170
)
(Transcription initiation factor Rrn7 domain containing protein.)
genome : 9,983,611 - 10,008,893 (25,283)
query : 1 - 715 (715/715)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 7, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001812)
HIX0001812
HIT000426936
(
AK308070
)
(TATA box-binding protein-associated factor RNA polymerase I subunit B.)
genome : 9,983,623 - 10,074,334 (90,712)
query : 1 - 2,037 (2,037/2,037)
15 exons
identity = 0.997
5'(0.985;1.000;0.989;1.000;1.000;1.000;1.000;
1.000;0.986;0.989;1.000;1.000;1.000;0.996;
1.000)3'
coverage = 1.000
InterPro :
IPR021752 : Transcription initiation factor Rrn7
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, E.R. 9, nucl 5, cyto_golg 5, pero 4.5,
E.R._golg 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001812)
HIX0001812
HIT000505006 (
ENST00000404869
)
(Transcription initiation factor Rrn7 domain containing protein.)
genome : 9,983,626 - 9,992,253 (8,628)
query : 1 - 505 (505/505)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001812)
HIX0001812
HIT000433964
(
AK315098
)
(TATA box-binding protein-associated factor RNA polymerase I subunit B.)
genome : 9,983,639 - 10,074,113 (90,475)
query : 1 - 1,800 (1,800/1,800)
15 exons
identity = 0.996
5'(0.980;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.986;0.989;1.000;1.000;0.986;0.996;
1.000)3'
coverage = 1.000
InterPro :
IPR021752 : Transcription initiation factor Rrn7
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, E.R. 9, nucl 5, cyto_golg 5, pero 4.5,
E.R._golg 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001812)
HIX0001812
HIT000600468 (
ENST00000497182
)
(Transcription initiation factor Rrn7 domain containing protein.)
genome : 9,983,648 - 9,985,949 (2,302)
query : 1 - 642 (642/642)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001812)
HIX0001812
HIT000479594 (
ENST00000396242
)
(Transcription initiation factor Rrn7 domain containing protein.)
genome : 9,983,652 - 10,074,282 (90,631)
query : 1 - 1,931 (1,931/1,931)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001812)
HIX0001812
HIT000490026
(
AK295402
)
(TATA box-binding protein-associated factor RNA polymerase I subunit B.)
genome : 9,983,652 - 10,074,282 (90,631)
query : 1 - 1,931 (1,931/1,931)
15 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.986;0.989;1.000;1.000;1.000;0.996;
1.000)3'
coverage = 1.000
InterPro :
IPR021752 : Transcription initiation factor Rrn7
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001812)
HIX0001812
HIT000009795
(
AK026521
)
(TATA box-binding protein-associated factor RNA polymerase I subunit B.)
genome : 9,983,654 - 10,074,071 (90,418)
query : 1 - 1,588 (1,588/1,614)
14 exons
identity = 0.998
5'(0.971;1.000;1.000;1.000;1.000;1.000;1.000;
0.986;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR021752 : Transcription initiation factor Rrn7
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 8, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001812)
HIX0001812
HIT000532792 (
ENST00000434858
)
(Transcription initiation factor Rrn7 domain containing protein.)
genome : 9,983,654 - 10,074,075 (90,422)
query : 1 - 1,592 (1,592/1,592)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 7, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001812)
HIX0001812
HIT000514115 (
ENST00000416181
)
(Transcription initiation factor Rrn7 domain containing protein.)
genome : 9,983,656 - 9,989,536 (5,881)
query : 1 - 297 (297/297)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001812)
HIX0001812
HIT000574393 (
ENST00000469895
)
(Transcription initiation factor Rrn7 domain containing protein.)
genome : 9,983,714 - 10,008,545 (24,832)
query : 1 - 681 (681/681)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 7, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001812)
HIX0001812
HIT000584226 (
ENST00000480197
)
(Transcription initiation factor Rrn7 domain containing protein.)
genome : 9,983,832 - 10,008,505 (24,674)
query : 1 - 554 (554/554)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001812)
HIX0001812
HIT000593992 (
ENST00000490432
)
(Transcription initiation factor Rrn7 domain containing protein.)
genome : 9,983,852 - 9,992,243 (8,392)
query : 1 - 620 (620/620)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 9.5, extr_plas 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001812)
HIX0001813
HIT000018997
(
AK094142
)
Representative transcript
(Conserved hypothetical protein.)
genome : 10,018,589 - 10,021,464 (2,876)
query : 1 - 2,877 (2,877/2,877)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, mito 3, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001813)
HIX0001812
HIT000596124 (
ENST00000492648
)
(Conserved hypothetical protein.)
genome : 10,022,833 - 10,053,591 (30,759)
query : 20 - 798 (779/798)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.976
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001812)
HIX0215127
HIT000714191 (
ENST00000602458
)
(Conserved hypothetical protein.)
genome : 10,076,489 - 10,079,719 (3,231)
query : 1 - 3,231 (3,231/3,231)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215127)
HIX0024052
HIT000044065
(
AK124192
)
Representative transcript
(Conserved hypothetical protein.)
genome : 10,077,066 - 10,079,320 (2,255)
query : 1 - 2,254 (2,254/2,254)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 13, cyto 10, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024052)
HIX0181970
pHIT000003774 ( pHIT000003774 )
Representative transcript
(Hypothetical protein.)
genome : 10,079,758 - 10,082,145 (2,388)
query : 1 - 330 (330/330)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0181970)
CAGE tag :
H22BB72C1202
HIX0214988
HIT000537427 (
ENST00000439493
)
(Conserved hypothetical protein.)
genome : 10,091,822 - 10,101,211 (9,390)
query : 1 - 564 (564/564)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14, cyto 10.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214988)
HIX0029957
HIT000098105
(
BC045665
)
Representative transcript
(Grainyhead-like protein 1 homolog; Mammalian grainyhead; NH32; Transcription factor CP2-like 2; Transcription factor LBP-32;)
genome : 10,092,866 - 10,096,058 (3,193)
query : 1 - 3,193 (3,193/3,208)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 13, cyto_nucl 8, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029957)
HIX0029957
HIT000099366
(
BC051708
)
(Grainyhead-like protein 1 homolog; Mammalian grainyhead; NH32; Transcription factor CP2-like 2; Transcription factor LBP-32;)
genome : 10,092,866 - 10,096,058 (3,193)
query : 1 - 3,193 (3,193/3,208)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 13, cyto_nucl 8, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029957)
HIX0215029
HIT000584733 (
ENST00000480736
)
(Conserved hypothetical protein.)
genome : 10,135,434 - 10,140,994 (5,561)
query : 1 - 572 (572/572)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 18.5, cyto_plas 13.1667, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215029)
HIX0029897
HIT000252785
(
AY358741
)
(Tumor necrosis factor ligand superfamily member 11; Osteoclast differentiation factor; ODF; Osteoprotegerin ligand; OPGL; Receptor activator of nuclear factor kappa-B ligand; RANKL; TNF-related activation-induced cytokine; TRANCE; AltName: CD_antigen=CD254; Contains: Tumor necrosis factor ligand superfamily member 11, membrane form; Contains: Tumor necrosis factor ligand superfamily member 11, soluble form;)
genome : 10,143,175 - 10,144,360 (1,186)
query : 1 - 1,186 (1,186/1,186)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR008983 : Tumour necrosis factor-like domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, plas 1, nucl 1, cyto 1, cyto_nucl 1, pero 1,
cyto_pero 1, cyto_plas 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029897)
HIX0029897
HIT000133074 (
ENST00000340444
)
(Tumor necrosis factor ligand superfamily member 11; Osteoclast differentiation factor; ODF; Osteoprotegerin ligand; OPGL; Receptor activator of nuclear factor kappa-B ligand; RANKL; TNF-related activation-induced cytokine; TRANCE; AltName: CD_antigen=CD254; Contains: Tumor necrosis factor ligand superfamily member 11, membrane form; Contains: Tumor necrosis factor ligand superfamily member 11, soluble form;)
genome : 10,143,286 - 10,146,158 (2,873)
query : 1 - 2,412 (2,412/2,412)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029897)
HIX0029897
HIT000252168
(
AY358123
)
Representative transcript
(Tumor necrosis factor ligand superfamily member 11; Osteoclast differentiation factor; ODF; Osteoprotegerin ligand; OPGL; Receptor activator of nuclear factor kappa-B ligand; RANKL; TNF-related activation-induced cytokine; TRANCE; AltName: CD_antigen=CD254; Contains: Tumor necrosis factor ligand superfamily member 11, membrane form; Contains: Tumor necrosis factor ligand superfamily member 11, soluble form;)
genome : 10,143,286 - 10,146,158 (2,873)
query : 1 - 2,412 (2,412/2,412)
2 exons
identity = 1.000
3'(1.000;0.999)5'
coverage = 1.000
InterPro :
IPR008983 : Tumour necrosis factor-like domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029897)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000043776
Pongo
sp. (Orangutan) : ENSPPYT00000014706
Pan
sp. (Chimpanzee) : ENSPTRT00000021703
HIX0030203
HIT000087399
(
BC009884
)
Representative transcript
(Hypothetical short protein.)
genome : 10,161,705 - 10,162,952 (1,248)
query : 1 - 1,249 (1,249/1,309)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 8.5, cyto_nucl 6.83333, mito 6,
cyto_pero 5.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030203)
HIX0030203
HIT000679866 (
ENST00000566840
)
(Hypothetical short protein.)
genome : 10,161,705 - 10,162,952 (1,248)
query : 1 - 1,248 (1,248/1,248)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 10, extr 6, cyto_mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030203)
HIX0215082
HIT000680546 (
ENST00000567540
)
(Conserved hypothetical protein.)
genome : 10,179,219 - 10,180,790 (1,572)
query : 1 - 1,572 (1,572/1,572)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10, cyto_mito 9, cyto 8.5, extr 8, mito 7.5,
nucl 7, cyto_pero 6.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215082)
HIX0214692
HIT000503762 (
ENST00000401510
)
(Conserved hypothetical protein.)
genome : 10,182,976 - 10,187,897 (4,922)
query : 1 - 614 (614/614)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, extr 10, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214692)
HIX0214692
HIT000434211
(
AK315345
)
(Conserved hypothetical protein.)
genome : 10,183,699 - 10,192,634 (8,936)
query : 1 - 1,681 (1,681/1,681)
4 exons
identity = 0.996
5'(0.984;0.996;0.998;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214692)
HIX0214692
HIT000263534
(
BC069383
)
(Conserved hypothetical protein.)
genome : 10,183,794 - 10,192,684 (8,891)
query : 1 - 1,639 (1,639/1,639)
4 exons
identity = 0.999
5'(1.000;1.000;0.999;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214692)
HIX0214692
HIT000265429
(
BC074922
)
(Conserved hypothetical protein.)
genome : 10,183,812 - 10,192,667 (8,856)
query : 1 - 1,604 (1,604/1,604)
4 exons
identity = 0.999
5'(1.000;1.000;0.999;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214692)
HIX0214692
HIT000062900
(
AF028008
)
Representative transcript
(Conserved hypothetical protein.)
genome : 10,183,829 - 10,192,869 (9,041)
query : 3 - 1,796 (1,794/1,796)
4 exons
identity = 0.996
5'(0.982;1.000;0.999;0.990)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214692)
HIX0214692
HIT000422045
(
AJ275989
)
(Conserved hypothetical protein.)
genome : 10,183,844 - 10,192,631 (8,788)
query : 1 - 1,533 (1,533/1,533)
4 exons
identity = 0.995
5'(1.000;1.000;0.992;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214692)
HIX0214692
HIT000546457 (
ENST00000448523
)
(Conserved hypothetical protein.)
genome : 10,183,956 - 10,188,006 (4,051)
query : 1 - 559 (559/559)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15, cyto 9.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214692)
HIX0214692
HIT000538254 (
ENST00000440320
)
(Conserved hypothetical protein.)
genome : 10,184,302 - 10,187,882 (3,581)
query : 1 - 653 (653/653)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, extr 10, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214692)
HIX0214907
HIT000004660
(
AK002186
)
Representative transcript
(Hypothetical protein.)
genome : 10,192,874 - 10,194,963 (2,090)
query : 1 - 2,090 (2,090/2,090)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12.5, extr 11, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214907)
HIX0029852
HIT000080977
(
AF504647
)
Representative transcript
(Conserved hypothetical protein.)
genome : 10,196,600 - 10,197,782 (1,183)
query : 7 - 1,190 (1,184/1,229)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.963
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 8, nucl 7.5, plas 7, mito 6, cyto 5.5,
E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029852)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000014704
Pan
sp. (Chimpanzee) : ENSPTRT00000021705
HIX0001815
HIT000363091 (
ENST00000381813
)
(Cystin-1; Cilia-associated protein;)
genome : 10,196,907 - 10,220,538 (23,632)
query : 1 - 2,738 (2,738/2,738)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, nucl 6, cyto 5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001815)
HIX0001815
HIT000366274 (
NM_001037160
)
(Cystin-1; Cilia-associated protein;)
genome : 10,196,926 - 10,220,538 (23,613)
query : 1 - 2,719 (2,719/2,719)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, nucl 6, cyto 5, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001815)
HIX0001815
HIT000016166
(
AK091299
)
(Cystin-1.)
genome : 10,196,972 - 10,220,176 (23,205)
query : 1 - 2,311 (2,311/2,311)
3 exons
identity = 0.997
3'(0.997;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001815)
HIX0001815
HIT000581457 (
ENST00000477304
)
(Hypothetical protein.)
genome : 10,198,741 - 10,221,071 (22,331)
query : 1 - 507 (507/507)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 17, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001815)
HIX0001815
HIT000243782
(
AF544983
)
Representative transcript
(Cystin-1; Cilia-associated protein;)
genome : 10,198,866 - 10,220,538 (21,673)
query : 1 - 779 (779/779)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, nucl 6, cyto 5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001815)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF390548
Rattus
sp. (Rat) : XM_001074594
Macaca
sp. (Macaque) : XM_001084741
Pan
sp. (Chimpanzee) : XM_001155543
Monodelphis
sp. (Opossum) : XM_001381077
Bos
sp. (Cow) : XM_882121
HIX0204101
HIT000523169 (
ENST00000425235
)
(Conserved hypothetical protein.)
genome : 10,223,908 - 10,226,228 (2,321)
query : 1 - 312 (312/312)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13, cyto 9.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204101)
HIX0118943
HIT000474783 (
ENST00000391256
)
(Non-protein coding transcript.)
genome : 10,230,332 - 10,230,446 (115)
query : 1 - 115 (115/115)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0118943)
HIX0214836
HIT000564916 (
ENST00000459969
)
(Ribonucleotide reductase small subunit family protein.)
genome : 10,262,839 - 10,264,244 (1,406)
query : 1 - 787 (787/787)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214836)
HIX0214836
HIT000566217 (
ENST00000461327
)
(Ribonucleotide reductase small subunit family protein.)
genome : 10,262,866 - 10,263,979 (1,114)
query : 1 - 580 (580/580)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 8, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214836)
HIX0214836
HIT000601569 (
ENST00000498343
)
(Ribonucleotide reductase small subunit family protein.)
genome : 10,262,866 - 10,263,839 (974)
query : 1 - 560 (560/560)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214836)
HIX0214836
HIT000594971 (
ENST00000491447
)
(Ribonucleotide reductase small subunit family protein.)
genome : 10,262,879 - 10,265,005 (2,127)
query : 1 - 644 (644/644)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 17, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214836)
HIX0214662
HIT000591288 (
ENST00000487591
)
(Ribonucleotide reductase small subunit family protein.)
genome : 10,266,639 - 10,267,347 (709)
query : 1 - 592 (592/592)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 18, mito 8, nucl 4, E.R._mito 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214662)
HIX0214662
HIT000567185 (
ENST00000462343
)
(Ribonucleotide reductase small subunit family protein.)
genome : 10,266,918 - 10,267,488 (571)
query : 1 - 454 (454/454)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cysk 17, cyto 9, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214662)
HIX0214662
HIT000589512_01 (
ENST00000485717
)
(Ribonucleotide reductase small subunit family protein.)
genome : 10,266,957 - 10,269,440 (2,484)
query : 1 - 573 (573/573)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 5.5, cyto_nucl 4.5, nucl 2.5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214662)
HIX0214662
HIT000050963
(
BC028932
)
Representative transcript
(Ribonucleotide reductase small subunit family protein.)
genome : 10,267,206 - 10,271,541 (4,336)
query : 6 - 2,548 (2,543/2,562)
4 exons
identity = 0.998
5'(0.979;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR000358 : Ribonucleotide reductase small subunit
IPR009078 : Ferritin-like superfamily
IPR012348 : Ribonucleotide reductase-related
GO :
0009186 : Biological Process : deoxyribonucleoside diphosphate metabolic process
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 9.5, mito 9, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214662)
HIX0022042
HIT000014438
(
AK057831
)
Representative transcript
(Conserved hypothetical protein.)
genome : 10,281,509 - 10,351,856 (70,348)
query : 1 - 1,902 (1,902/1,902)
4 exons
identity = 0.995
5'(1.000;1.000;1.000;0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 12.5, cyto 11.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022042)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : ENSPTRT00000021708
HIX0022042
HIT000363064 (
ENST00000381786
)
(Conserved hypothetical protein.)
genome : 10,281,509 - 10,351,851 (70,343)
query : 1 - 1,897 (1,897/1,897)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 12.5, cyto 11.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022042)
HIX0022042
HIT000334974
(
BC093999
)
(Conserved hypothetical protein.)
genome : 10,281,980 - 10,350,769 (68,790)
query : 2 - 557 (556/557)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 12.5, cyto 11.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022042)
HIX0022042
HIT000334976
(
BC094001
)
(Conserved hypothetical protein.)
genome : 10,281,980 - 10,350,769 (68,790)
query : 1 - 556 (556/556)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 12.5, cyto 11.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022042)
HIX0022042
HIT000318698 (
NM_182626
)
(Conserved hypothetical protein.)
genome : 10,281,981 - 10,350,942 (68,962)
query : 1 - 728 (728/728)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 12.5, cyto 11.5, extr 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022042)
HIX0118763
HIT000469942 (
ENST00000383920
)
(Non-protein coding transcript.)
genome : 10,295,199 - 10,295,333 (135)
query : 1 - 135 (135/135)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0118763)
HIX0204299
HIT000659485 (
NR_036222
)
(Non-protein coding transcript.)
genome : 10,332,740 - 10,332,797 (58)
query : 1 - 58 (58/58)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204299)
HIX0204299
HIT000692241 (
ENST00000580325
)
(Non-protein coding transcript.)
genome : 10,332,740 - 10,332,797 (58)
query : 1 - 58 (58/58)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204299)
HIX0118765
HIT000470184 (
ENST00000384171
)
(Non-protein coding transcript.)
genome : 10,436,173 - 10,436,306 (134)
query : 1 - 134 (134/134)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0118765)
HIX0001817
HIT000521608 (
ENST00000423674
)
(Non-protein coding transcript.)
genome : 10,443,015 - 10,559,973 (116,959)
query : 1 - 586 (586/586)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001817)
HIX0001817
HIT000199070 (
NM_002149
)
(Recoverin family protein.)
genome : 10,443,030 - 10,567,743 (124,714)
query : 1 - 1,762 (1,762/1,779)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16.5, nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001817)
HIX0001817
HIT000117771 (
ENST00000307845
)
(Recoverin family protein.)
genome : 10,443,033 - 10,567,735 (124,703)
query : 1 - 1,751 (1,751/1,751)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001817)
HIX0001817
HIT000038029
(
BC017482
)
(Hippocalcin-like protein 1; Calcium-binding protein BDR-1; HLP2; Visinin-like protein 3; VILIP-3;)
genome : 10,443,040 - 10,567,735 (124,696)
query : 1 - 1,744 (1,744/1,792)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
IPR028846 : Recoverin family
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16.5, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001817)
HIX0001817
HIT000034613
(
BC009846
)
(Hippocalcin-like protein 1; Calcium-binding protein BDR-1; HLP2; Visinin-like protein 3; VILIP-3;)
genome : 10,443,055 - 10,567,735 (124,681)
query : 1 - 1,729 (1,729/1,747)
5 exons
identity = 0.999
5'(1.000;0.988;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
IPR028846 : Recoverin family
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16.5, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001817)
HIX0001817
HIT000037796
(
BC017028
)
(Hippocalcin-like protein 1; Calcium-binding protein BDR-1; HLP2; Visinin-like protein 3; VILIP-3;)
genome : 10,443,063 - 10,567,728 (124,666)
query : 1 - 1,714 (1,714/1,730)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
IPR028846 : Recoverin family
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16.5, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001817)
HIX0001817
HIT000003071
(
AK000596
)
Representative transcript
(Hippocalcin-like protein 1; Calcium-binding protein BDR-1; HLP2; Visinin-like protein 3; VILIP-3;)
genome : 10,443,826 - 10,567,743 (123,918)
query : 7 - 1,910 (1,904/1,926)
6 exons
identity = 0.998
5'(0.996;1.000;0.994;1.000;1.000;0.999)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16.5, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001817)
HIX0001817
HIT000212262 (
NM_134421
)
(Recoverin family protein.)
genome : 10,443,826 - 10,567,743 (123,918)
query : 1 - 1,904 (1,904/1,921)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16.5, nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001817)
HIX0001817
HIT000363043 (
ENST00000381765
)
(Recoverin family protein.)
genome : 10,443,826 - 10,567,743 (123,918)
query : 1 - 1,904 (1,904/1,904)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001817)
HIX0001817
pHIT000099314 ( pHIT000099314 )
(Hypothetical protein.)
genome : 10,448,750 - 10,471,710 (22,961)
query : 1 - 453 (453/453)
5 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001817)
CAGE tag :
T02F009DB801
HIX0018646
HIT000018553
(
AK093686
)
Representative transcript
(Conserved hypothetical protein.)
genome : 10,452,969 - 10,455,253 (2,285)
query : 1 - 2,287 (2,287/2,287)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 12.5, nucl 11, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018646)
HIX0001817
HIT000306765
(
CR749837
)
(Hippocalcin-like protein 1; Calcium-binding protein BDR-1; HLP2; Visinin-like protein 3; VILIP-3;)
genome : 10,464,473 - 10,567,478 (103,006)
query : 1 - 4,781 (4,781/4,930)
8 exons
identity = 0.996
5'(1.000;1.000;0.988;0.994;1.000;0.995;0.996;
0.998)3'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14, nucl 9.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001817)
HIX0001817
HIT000517744 (
ENST00000419810
)
(Recoverin family protein.)
genome : 10,464,473 - 10,567,478 (103,006)
query : 1 - 4,781 (4,781/4,781)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001817)
HIX0001817
HIT000724242 (
NM_001258357
)
(Recoverin family protein.)
genome : 10,470,289 - 10,567,743 (97,455)
query : 1 - 1,536 (1,536/1,553)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16.5, nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001817)
HIX0001817
HIT000046605
(
AK126732
)
(Conserved hypothetical protein.)
genome : 10,492,314 - 10,495,576 (3,263)
query : 1 - 3,263 (3,263/3,263)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13, cyto 9, mito 6, E.R._mito 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001817)
HIX0114392
pHIT000003782 ( pHIT000003782 )
Representative transcript
(Hypothetical protein.)
genome : 10,494,525 - 10,497,628 (3,104)
query : 1 - 351 (351/351)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0114392)
CAGE tag :
H10BA71A0809
HIX0001817
HIT000724243 (
NM_001258358
)
(Recoverin family protein.)
genome : 10,508,804 - 10,567,743 (58,940)
query : 1 - 1,548 (1,548/1,565)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16.5, nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001817)
HIX0001817
HIT000724244 (
NM_001258359
)
(Recoverin family protein.)
genome : 10,508,890 - 10,567,743 (58,854)
query : 1 - 1,942 (1,942/1,959)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16.5, nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001817)
HIX0001817
HIT000425077
(
AK292280
)
(Hippocalcin-like protein 1; Calcium-binding protein BDR-1; HLP2; Visinin-like protein 3; VILIP-3;)
genome : 10,508,890 - 10,567,217 (58,328)
query : 1 - 1,416 (1,416/1,416)
5 exons
identity = 0.999
5'(1.000;1.000;0.998;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
IPR028846 : Recoverin family
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16.5, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001817)
HIX0001817
HIT000100575
(
D16227
)
(Hippocalcin-like protein 1; Calcium-binding protein BDR-1; HLP2; Visinin-like protein 3; VILIP-3;)
genome : 10,536,929 - 10,567,191 (30,263)
query : 10 - 968 (959/968)
4 exons
identity = 0.964
5'(0.881;0.988;1.000;0.954)3'
coverage = 0.991
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
IPR028846 : Recoverin family
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 14, extr 4, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001817)
HIX0001817
HIT000266397
(
BT009835
)
(Recoverin family protein.)
genome : 10,559,884 - 10,566,945 (7,062)
query : 1 - 580 (580/582)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.997
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
IPR028846 : Recoverin family
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16.5, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001817)
HIX0001817
HIT000268845
(
CR541975
)
(Recoverin family protein.)
genome : 10,559,884 - 10,566,947 (7,064)
query : 1 - 582 (582/582)
3 exons
identity = 0.991
5'(0.997;1.000;0.959)3'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
IPR028846 : Recoverin family
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16.5, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001817)
HIX0001817
HIT000065783
(
AF070616
)
(Recoverin family protein.)
genome : 10,560,131 - 10,567,743 (7,613)
query : 1 - 1,131 (1,131/1,148)
3 exons
identity = 0.998
5'(1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
IPR028846 : Recoverin family
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 7, extr 3, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001817)
HIX0001817
HIT000520067 (
ENST00000422133
)
(EF-hand domain pair containing protein.)
genome : 10,560,147 - 10,567,126 (6,980)
query : 1 - 587 (587/587)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15, nucl 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001817)
HIX0022286
HIT000009774
(
AK026500
)
Representative transcript
(Conserved hypothetical protein.)
genome : 10,560,357 - 10,562,892 (2,536)
query : 1 - 2,523 (2,523/2,534)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 7.5, cyto_nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022286)
HIX0001817
HIT000018830
(
AK093973
)
(Hypothetical protein.)
genome : 10,565,477 - 10,567,727 (2,251)
query : 1 - 2,247 (2,247/2,247)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_mito 7.66667, cyto_nucl 7.5, cyto 7,
mito 6.5, extr_plas 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001817)
HIX0001818
HIT000104524 (
ENST00000234111
)
(Ornithine decarboxylase family protein.)
genome : 10,580,094 - 10,588,630 (8,537)
query : 1 - 2,653 (2,653/2,653)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15.5, nucl 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001818)
HIX0001818
HIT000050599
(
BC014562
)
(Ornithine decarboxylase; ODC; EC=4.1.1.17;)
genome : 10,580,515 - 10,588,405 (7,891)
query : 1 - 2,010 (2,010/2,043)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.983;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.1.1.17
KEGG pathway :
00330 : Arginine and proline metabolism (98)
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000183 : Ornithine/DAP/Arg decarboxylase
IPR002433 : Ornithine decarboxylase
IPR009006 : Alanine racemase/group IV decarboxylase, C-terminal
IPR022643 : Orn/DAP/Arg decarboxylase 2, C-terminal
IPR022644 : Orn/DAP/Arg decarboxylase 2, N-terminal
IPR022653 : Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site
IPR022657 : Orn/DAP/Arg decarboxylase 2, conserved site
IPR029066 : PLP-binding barrel
GO :
0003824 : Molecular Function : catalytic activity
0006596 : Biological Process : polyamine biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15.5, nucl 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001818)
HIX0001818
HIT000039888
(
BC025296
)
(Ornithine decarboxylase; ODC; EC=4.1.1.17;)
genome : 10,580,515 - 10,588,420 (7,906)
query : 1 - 2,022 (2,022/2,039)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.991;1.000)5'
coverage = 1.000
EC number :
EC 4.1.1.17
KEGG pathway :
00330 : Arginine and proline metabolism (98)
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000183 : Ornithine/DAP/Arg decarboxylase
IPR002433 : Ornithine decarboxylase
IPR009006 : Alanine racemase/group IV decarboxylase, C-terminal
IPR022643 : Orn/DAP/Arg decarboxylase 2, C-terminal
IPR022644 : Orn/DAP/Arg decarboxylase 2, N-terminal
IPR022653 : Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site
IPR022657 : Orn/DAP/Arg decarboxylase 2, conserved site
IPR029066 : PLP-binding barrel
GO :
0003824 : Molecular Function : catalytic activity
0006596 : Biological Process : polyamine biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15.5, nucl 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001818)
HIX0001818
HIT000321971
(
X55362
)
Representative transcript
(Ornithine decarboxylase; ODC; EC=4.1.1.17;)
genome : 10,580,511 - 10,588,421 (7,911)
query : 1 - 2,027 (2,027/2,035)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.982;1.000)5'
coverage = 0.996
EC number :
EC 4.1.1.17
KEGG pathway :
00330 : Arginine and proline metabolism (98)
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000183 : Ornithine/DAP/Arg decarboxylase
IPR002433 : Ornithine decarboxylase
IPR009006 : Alanine racemase/group IV decarboxylase, C-terminal
IPR022643 : Orn/DAP/Arg decarboxylase 2, C-terminal
IPR022644 : Orn/DAP/Arg decarboxylase 2, N-terminal
IPR022653 : Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site
IPR022657 : Orn/DAP/Arg decarboxylase 2, conserved site
IPR029066 : PLP-binding barrel
GO :
0003824 : Molecular Function : catalytic activity
0006596 : Biological Process : polyamine biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15.5, nucl 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001818)
HIX0001818
HIT000199431 (
NM_002539
)
(Ornithine decarboxylase family protein.)
genome : 10,580,508 - 10,588,453 (7,946)
query : 1 - 2,062 (2,062/2,062)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.1.1.17
KEGG pathway :
00330 : Arginine and proline metabolism (98)
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15.5, nucl 14.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001818)
HIX0001818
HIT000194467
(
M16650
)
(Ornithine decarboxylase family protein.)
genome : 10,580,508 - 10,585,350 (4,843)
query : 1 - 1,815 (1,815/1,815)
11 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000183 : Ornithine/DAP/Arg decarboxylase
IPR002433 : Ornithine decarboxylase
IPR009006 : Alanine racemase/group IV decarboxylase, C-terminal
IPR022643 : Orn/DAP/Arg decarboxylase 2, C-terminal
IPR022644 : Orn/DAP/Arg decarboxylase 2, N-terminal
IPR022653 : Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site
IPR022657 : Orn/DAP/Arg decarboxylase 2, conserved site
IPR029066 : PLP-binding barrel
GO :
0003824 : Molecular Function : catalytic activity
0006596 : Biological Process : polyamine biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15.5, nucl 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001818)
HIX0001818
HIT000194723
(
M20372
)
(Ornithine decarboxylase family protein.)
genome : 10,580,509 - 10,584,337 (3,829)
query : 1 - 1,395 (1,395/1,395)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000183 : Ornithine/DAP/Arg decarboxylase
IPR002433 : Ornithine decarboxylase
IPR009006 : Alanine racemase/group IV decarboxylase, C-terminal
IPR022643 : Orn/DAP/Arg decarboxylase 2, C-terminal
IPR022644 : Orn/DAP/Arg decarboxylase 2, N-terminal
IPR022657 : Orn/DAP/Arg decarboxylase 2, conserved site
IPR029066 : PLP-binding barrel
GO :
0003824 : Molecular Function : catalytic activity
0006596 : Biological Process : polyamine biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 18.5, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001818)
HIX0001818
HIT000496580
(
AK301956
)
(Ornithine decarboxylase; ODC; EC=4.1.1.17;)
genome : 10,580,516 - 10,588,453 (7,938)
query : 1 - 1,926 (1,926/1,926)
12 exons
identity = 0.990
3'(0.977;0.966;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.1.1.17
KEGG pathway :
00330 : Arginine and proline metabolism (98)
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000183 : Ornithine/DAP/Arg decarboxylase
IPR002433 : Ornithine decarboxylase
IPR009006 : Alanine racemase/group IV decarboxylase, C-terminal
IPR022643 : Orn/DAP/Arg decarboxylase 2, C-terminal
IPR022644 : Orn/DAP/Arg decarboxylase 2, N-terminal
IPR022657 : Orn/DAP/Arg decarboxylase 2, conserved site
IPR029066 : PLP-binding barrel
GO :
0003824 : Molecular Function : catalytic activity
0006596 : Biological Process : polyamine biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 8, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001818)
HIX0001818
HIT000425149
(
AK292352
)
(Ornithine decarboxylase; ODC; EC=4.1.1.17;)
genome : 10,580,727 - 10,587,906 (7,180)
query : 1 - 1,943 (1,943/1,943)
12 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;1.000;1.000;0.997)5'
coverage = 1.000
EC number :
EC 4.1.1.17
KEGG pathway :
00330 : Arginine and proline metabolism (98)
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR000183 : Ornithine/DAP/Arg decarboxylase
IPR002433 : Ornithine decarboxylase
IPR009006 : Alanine racemase/group IV decarboxylase, C-terminal
IPR022643 : Orn/DAP/Arg decarboxylase 2, C-terminal
IPR022644 : Orn/DAP/Arg decarboxylase 2, N-terminal
IPR022653 : Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site
IPR022657 : Orn/DAP/Arg decarboxylase 2, conserved site
IPR029066 : PLP-binding barrel
GO :
0003824 : Molecular Function : catalytic activity
0006596 : Biological Process : polyamine biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15.5, nucl 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001818)
HIX0001818
HIT000505185 (
ENST00000405333
)
(Ornithine decarboxylase family protein.)
genome : 10,580,727 - 10,587,906 (7,180)
query : 1 - 1,943 (1,943/1,943)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15.5, nucl 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001818)
HIX0001818
pHIT000003785 ( pHIT000003785 )
(Conserved hypothetical protein.)
genome : 10,580,850 - 10,588,985 (8,136)
query : 1 - 1,548 (1,548/1,548)
12 exons
InterPro :
IPR000183 : Ornithine/DAP/Arg decarboxylase
IPR002433 : Ornithine decarboxylase
IPR009006 : Alanine racemase/group IV decarboxylase, C-terminal
IPR022643 : Orn/DAP/Arg decarboxylase 2, C-terminal
IPR022644 : Orn/DAP/Arg decarboxylase 2, N-terminal
IPR022653 : Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site
IPR022657 : Orn/DAP/Arg decarboxylase 2, conserved site
IPR029066 : PLP-binding barrel
GO :
0003824 : Molecular Function : catalytic activity
0006596 : Biological Process : polyamine biosynthetic process
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001818)
CAGE tag :
H10BA71A0809
HIX0001818
HIT000431632
(
AK312766
)
(Ornithine decarboxylase family protein.)
genome : 10,580,850 - 10,585,159 (4,310)
query : 1 - 1,387 (1,387/1,387)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000183 : Ornithine/DAP/Arg decarboxylase
IPR002433 : Ornithine decarboxylase
IPR009006 : Alanine racemase/group IV decarboxylase, C-terminal
IPR022643 : Orn/DAP/Arg decarboxylase 2, C-terminal
IPR022644 : Orn/DAP/Arg decarboxylase 2, N-terminal
IPR022653 : Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site
IPR022657 : Orn/DAP/Arg decarboxylase 2, conserved site
IPR029066 : PLP-binding barrel
GO :
0003824 : Molecular Function : catalytic activity
0006596 : Biological Process : polyamine biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15.5, nucl 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001818)
HIX0001818
HIT000342125
(
DQ185043
)
(Ornithine decarboxylase family protein.)
genome : 10,583,673 - 10,584,730 (1,058)
query : 1 - 464 (464/464)
4 exons
identity = 0.998
3'(1.000;0.993;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000183 : Ornithine/DAP/Arg decarboxylase
IPR002433 : Ornithine decarboxylase
IPR022644 : Orn/DAP/Arg decarboxylase 2, N-terminal
IPR022653 : Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site
IPR029066 : PLP-binding barrel
GO :
0003824 : Molecular Function : catalytic activity
0006596 : Biological Process : polyamine biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 12, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001818)
HIX0001818
HIT000544219 (
ENST00000446285
)
(Ornithine decarboxylase family protein.)
genome : 10,584,221 - 10,588,435 (4,215)
query : 1 - 665 (665/665)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 12, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001818)
HIX0001818
HIT000541152 (
ENST00000443218
)
(Ornithine decarboxylase family protein.)
genome : 10,584,670 - 10,587,914 (3,245)
query : 1 - 494 (494/494)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, extr 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001818)
HIX0001818
HIT000321822
(
X53271
)
(Conserved hypothetical protein.)
genome : 10,585,093 - 10,585,658 (566)
query : 1 - 570 (570/570)
1 exon
identity = 0.979
3'(0.979)5'
coverage = 1.000
EC number :
EC 4.1.1.17
KEGG pathway :
00330 : Arginine and proline metabolism (98)
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, plas 3, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001818)
HIX0001818
HIT000101194
(
D28365
)
(Non-protein coding transcript.)
genome : 10,585,153 - 10,588,274 (3,122)
query : 1 - 161 (161/161)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001818)
HIX0118762
HIT000469928 (
ENST00000383906
)
(Hypothetical short protein.)
genome : 10,586,840 - 10,586,975 (136)
query : 1 - 136 (136/136)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0118762)
HIX0118762
HIT000657796 (
NR_028374
)
(Hypothetical short protein.)
genome : 10,586,840 - 10,586,975 (136)
query : 1 - 136 (136/136)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0118762)
HIX0057135
HIT000666579 (
ENST00000553181
)
(Conserved hypothetical protein.)
genome : 10,588,820 - 10,591,453 (2,634)
query : 1 - 1,737 (1,737/1,737)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, extr 3, cyto_pero 2.5, nucl 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057135)
HIX0057135
HIT000339900
(
BC111372
)
Representative transcript
(Hypothetical short protein.)
genome : 10,589,788 - 10,590,868 (1,081)
query : 1 - 1,081 (1,081/1,106)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 12, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057135)
HIX0057135
HIT000661494 (
ENST00000547349
)
(Hypothetical protein.)
genome : 10,589,854 - 10,590,920 (1,067)
query : 1 - 732 (732/732)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, extr 3, cyto_pero 2.5, nucl 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057135)
HIX0162120
HIT000504910 (
ENST00000404616
)
(Conserved hypothetical protein.)
genome : 10,592,445 - 10,595,678 (3,234)
query : 1 - 494 (494/494)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, extr 8, cyto_pero 2.5, nucl 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162120)
HIX0017494
HIT000016672
(
AK091805
)
Representative transcript
(Conserved hypothetical protein.)
genome : 10,702,421 - 10,706,491 (4,071)
query : 1 - 2,929 (2,929/2,929)
2 exons
identity = 0.993
3'(0.993;0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017494)
HIX0001819
HIT000209575 (
NM_024894
)
(Nucleolar protein 10;)
genome : 10,710,893 - 10,830,113 (119,221)
query : 1 - 3,497 (3,497/3,515)
21 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 16.5, cyto 12.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001819)
HIX0001819
HIT000724356 (
NM_001261392
)
(Nucleolar protein 10 isoform 2.)
genome : 10,710,893 - 10,830,113 (119,221)
query : 1 - 3,419 (3,419/3,437)
20 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 16.5, cyto 13.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001819)
HIX0001819
HIT000724358 (
NM_001261394
)
(Nucleolar protein 10 isoform 3.)
genome : 10,710,893 - 10,830,113 (119,221)
query : 1 - 3,347 (3,347/3,365)
20 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15, cyto 14
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001819)
HIX0001819
HIT000727110 (
NR_048552
)
(Nucleolar protein 10 isoform 1.)
genome : 10,710,893 - 10,830,113 (119,221)
query : 1 - 3,451 (3,451/3,469)
20 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 11, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001819)
HIX0001819
HIT000307231 (
ENST00000345985
)
(Nucleolar protein 10 isoform 3.)
genome : 10,710,892 - 10,830,098 (119,207)
query : 1 - 3,333 (3,333/3,333)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001819)
HIX0001819
HIT000007411
(
AK024137
)
(Nucleolar protein 10 isoform 3.)
genome : 10,710,894 - 10,830,098 (119,205)
query : 1 - 3,333 (3,333/3,333)
20 exons
identity = 0.995
3'(0.990;1.000;0.996;0.994;1.000;1.000;1.000;
1.000;0.981;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR012580 : NUC153
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001819)
HIX0001819
HIT000032229
(
BC005125
)
Representative transcript
(Nucleolar protein 10;)
genome : 10,711,781 - 10,830,093 (118,313)
query : 1 - 2,589 (2,589/2,608)
21 exons
identity = 1.000
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR012580 : NUC153
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 16.5, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001819)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK148210
Danio
sp. (Zebrafish) : BC047174
Rattus
sp. (Rat) : BC081954
Bos
sp. (Cow) : BC120147
Gallus
sp. (Chicken) : BX934079
Tetraodon
sp. (Tetraodon) : CR708302
Equus
sp. (Horse) : ENSECAT00000016499
Macaca
sp. (Macaque) : ENSMMUT00000014927
Oryzias
sp. (Medaka) : ENSORLT00000022241
Pongo
sp. (Orangutan) : ENSPPYT00000014698
Takifugu
sp. (Fugu) : SINFRUT00000173409
Monodelphis
sp. (Opossum) : XM_001371846
Pan
sp. (Chimpanzee) : XM_525686
Canis
sp. (Dog) : XM_843587
HIX0001819
HIT000362963 (
ENST00000381685
)
(Nucleolar protein 10;)
genome : 10,711,781 - 10,830,093 (118,313)
query : 1 - 2,589 (2,589/2,589)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 16.5, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001819)
HIX0001819
HIT000494241
(
AK299617
)
(Nucleolar protein 10 isoform 1.)
genome : 10,711,928 - 10,830,101 (118,174)
query : 1 - 2,404 (2,404/2,404)
20 exons
identity = 0.998
3'(0.997;0.990;1.000;1.000;1.000;0.990;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR012580 : NUC153
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 11, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001819)
HIX0001819
HIT000641713 (
ENST00000542668
)
(Nucleolar protein 10 isoform 1.)
genome : 10,711,928 - 10,830,101 (118,174)
query : 1 - 2,404 (2,404/2,404)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 11, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001819)
HIX0001819
HIT000491793
(
AK297169
)
(Nucleolar protein 10 isoform 2.)
genome : 10,711,999 - 10,830,101 (118,103)
query : 1 - 2,301 (2,301/2,301)
20 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.981;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR012580 : NUC153
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 16.5, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001819)
HIX0001819
HIT000637429 (
ENST00000538384
)
(Nucleolar protein 10 isoform 2.)
genome : 10,711,999 - 10,830,101 (118,103)
query : 1 - 2,301 (2,301/2,301)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 16.5, cyto 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001819)
HIX0001819
HIT000423477
(
AK290680
)
(Nucleolar protein 10;)
genome : 10,712,071 - 10,830,077 (118,007)
query : 1 - 2,283 (2,283/2,283)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR012580 : NUC153
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 16.5, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001819)
HIX0162249
HIT000512472 (
ENST00000414538
)
(Conserved hypothetical protein.)
genome : 10,729,292 - 10,744,956 (15,665)
query : 1 - 565 (565/565)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162249)
HIX0001819
HIT000529253 (
ENST00000431319
)
(Nucleolar protein 10 isoform 2.)
genome : 10,762,149 - 10,811,816 (49,668)
query : 1 - 827 (827/827)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 14.5, nucl 10.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001819)
HIX0001819
HIT000007274
(
AK024000
)
(Nucleolar protein 10 isoform 2.)
genome : 10,774,260 - 10,830,091 (55,832)
query : 1 - 1,418 (1,418/1,418)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19, nucl 17.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001819)
HIX0029827
HIT000319192 (
NM_198182
)
(Grainyhead-like protein 1 homolog; Mammalian grainyhead; NH32; Transcription factor CP2-like 2; Transcription factor LBP-32;)
genome : 10,091,792 - 10,142,412 (50,621)
query : 1 - 3,605 (3,605/3,610)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 10, cysk 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029827)
HIX0029827
HIT000124019 (
ENST00000324883
)
(Grainyhead-like protein 1 homolog; Mammalian grainyhead; NH32; Transcription factor CP2-like 2; Transcription factor LBP-32;)
genome : 10,091,792 - 10,142,411 (50,620)
query : 1 - 3,527 (3,527/3,527)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10, cyto 8, extr 6, cyto_pero 5.5, E.R._mito 5,
mito 3, E.R. 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029827)
HIX0029827
HIT000491606
(
AK296982
)
(Grainyhead-like protein 1 homolog; Mammalian grainyhead; NH32; Transcription factor CP2-like 2; Transcription factor LBP-32;)
genome : 10,091,822 - 10,141,040 (49,219)
query : 1 - 2,311 (2,311/2,311)
16 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;0.997)3'
coverage = 1.000
InterPro :
IPR007604 : CP2 transcription factor
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 12, nucl 7, cysk 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029827)
HIX0029827
HIT000488479
(
AK293855
)
(Grainyhead-like protein 1 homolog; Mammalian grainyhead; NH32; Transcription factor CP2-like 2; Transcription factor LBP-32;)
genome : 10,091,822 - 10,140,859 (49,038)
query : 1 - 2,099 (2,099/2,099)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.989;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029827)
HIX0029827
HIT000569167 (
ENST00000464418
)
(Grainyhead-like protein 1 homolog; Mammalian grainyhead; NH32; Transcription factor CP2-like 2; Transcription factor LBP-32;)
genome : 10,091,822 - 10,140,859 (49,038)
query : 1 - 2,099 (2,099/2,099)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029827)
HIX0029827
HIT000431816
(
AK312950
)
Representative transcript
(Grainyhead-like protein 1 homolog; Mammalian grainyhead; NH32; Transcription factor CP2-like 2; Transcription factor LBP-32;)
genome : 10,091,822 - 10,140,835 (49,014)
query : 1 - 1,998 (1,998/1,998)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007604 : CP2 transcription factor
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 10, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029827)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF411212
Bos
sp. (Cow) : BC119971
Danio
sp. (Zebrafish) : BC125889
Pongo
sp. (Orangutan) : CR858944
Canis
sp. (Dog) : ENSCAFT00000005454
Equus
sp. (Horse) : ENSECAT00000017224
Oryzias
sp. (Medaka) : ENSORLT00000019085
Tetraodon
sp. (Tetraodon) : GSTENT00032186001
Takifugu
sp. (Fugu) : SINFRUT00000170192
Macaca
sp. (Macaque) : XM_001090260
Monodelphis
sp. (Opossum) : XM_001371946
Rattus
sp. (Rat) : XM_234006
Gallus
sp. (Chicken) : XM_426209
Pan
sp. (Chimpanzee) : XM_525685
HIX0029827
HIT000260820
(
BC063299
)
(Grainyhead-like protein 1 homolog; Mammalian grainyhead; NH32; Transcription factor CP2-like 2; Transcription factor LBP-32;)
genome : 10,091,822 - 10,106,530 (14,709)
query : 1 - 5,400 (5,400/5,417)
6 exons
identity = 0.998
5'(0.994;0.995;0.998;1.000;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14, cyto 10.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029827)
HIX0029827
HIT000336010
(
BC098456
)
(Grainyhead-like protein 1 homolog; Mammalian grainyhead; NH32; Transcription factor CP2-like 2; Transcription factor LBP-32;)
genome : 10,091,822 - 10,106,530 (14,709)
query : 1 - 5,401 (5,401/5,417)
6 exons
identity = 0.998
5'(0.994;0.995;0.998;1.000;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14, cyto 10.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029827)
HIX0029827
HIT000600681 (
ENST00000497403
)
(Grainyhead-like protein 1 homolog; Mammalian grainyhead; NH32; Transcription factor CP2-like 2; Transcription factor LBP-32;)
genome : 10,091,822 - 10,106,530 (14,709)
query : 1 - 5,400 (5,400/5,400)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14, cyto 10.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029827)
HIX0029827
HIT000124026 (
ENST00000324907
)
(Grainyhead-like protein 1 homolog; Mammalian grainyhead; NH32; Transcription factor CP2-like 2; Transcription factor LBP-32;)
genome : 10,091,827 - 10,142,405 (50,579)
query : 1 - 3,563 (3,563/3,563)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 10, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029827)
HIX0029827
HIT000073702
(
AF198489
)
(Grainyhead-like protein 1 homolog; Mammalian grainyhead; NH32; Transcription factor CP2-like 2; Transcription factor LBP-32;)
genome : 10,091,854 - 10,141,119 (49,266)
query : 1 - 2,250 (2,250/2,250)
16 exons
identity = 0.999
5'(0.992;0.995;1.000;0.997;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007604 : CP2 transcription factor
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 12.5, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029827)
HIX0029827
HIT000262677
(
BC067519
)
(Grainyhead-like protein 1 homolog; Mammalian grainyhead; NH32; Transcription factor CP2-like 2; Transcription factor LBP-32;)
genome : 10,091,911 - 10,140,960 (49,050)
query : 1 - 2,034 (2,034/2,034)
16 exons
identity = 0.999
5'(0.986;1.000;1.000;1.000;1.000;1.000;1.000;
0.989;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007604 : CP2 transcription factor
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 10, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029827)
HIX0029827
HIT000262678
(
BC067520
)
(Grainyhead-like protein 1 homolog; Mammalian grainyhead; NH32; Transcription factor CP2-like 2; Transcription factor LBP-32;)
genome : 10,091,911 - 10,140,960 (49,050)
query : 1 - 2,034 (2,034/2,034)
16 exons
identity = 0.998
5'(0.986;0.995;1.000;0.997;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996)3'
coverage = 1.000
InterPro :
IPR007604 : CP2 transcription factor
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 11, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029827)
HIX0029827
HIT000262679
(
BC067521
)
(Grainyhead-like protein 1 homolog; Mammalian grainyhead; NH32; Transcription factor CP2-like 2; Transcription factor LBP-32;)
genome : 10,091,911 - 10,140,960 (49,050)
query : 1 - 2,060 (2,060/2,060)
16 exons
identity = 0.997
5'(0.972;0.995;1.000;0.997;0.987;1.000;1.000;
1.000;0.994;0.987;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007604 : CP2 transcription factor
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14, cyto 10.5, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029827)
HIX0029827
HIT000576555 (
ENST00000472167
)
(Grainyhead-like protein 1 homolog; Mammalian grainyhead; NH32; Transcription factor CP2-like 2; Transcription factor LBP-32;)
genome : 10,091,911 - 10,140,960 (49,050)
query : 1 - 2,060 (2,060/2,060)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 14, cyto 9.5, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029827)
HIX0029827
HIT000505203 (
ENST00000405379
)
(Grainyhead-like protein 1 homolog; Mammalian grainyhead; NH32; Transcription factor CP2-like 2; Transcription factor LBP-32;)
genome : 10,095,041 - 10,142,411 (47,371)
query : 18 - 3,433 (3,416/3,433)
15 exons
identity = 1.000
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14, cyto 10.5, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029827)
HIX0029827
HIT000597916 (
ENST00000494520
)
(Grainyhead-like protein 1 homolog; Mammalian grainyhead; NH32; Transcription factor CP2-like 2; Transcription factor LBP-32;)
genome : 10,101,093 - 10,104,436 (3,344)
query : 1 - 780 (780/780)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 16, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029827)
HIX0029827
HIT000079230
(
AF411210
)
(Grainyhead-like protein 3 homolog isoform 4.)
genome : 10,101,294 - 10,141,333 (40,040)
query : 1 - 1,881 (1,881/1,881)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007604 : CP2 transcription factor
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10, cyto 8, extr 6, cyto_pero 5.5, E.R._mito 5,
mito 3, E.R. 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029827)
HIX0200263
HIT000260807
(
BC063286
)
Representative transcript
(Krueppel-like factor 11; Transforming growth factor-beta-inducible early growth response protein 2; TGFB-inducible early growth response protein 2; TIEG-2;)
genome : 10,183,682 - 10,194,963 (11,282)
query : 1 - 4,031 (4,031/4,054)
4 exons
identity = 0.999
5'(1.000;1.000;0.999;0.998)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200263)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720349
Mus
sp. (Mouse) : BC060642
Danio
sp. (Zebrafish) : BC125942
Rattus
sp. (Rat) : DQ232764
Canis
sp. (Dog) : ENSCAFT00000005464
Monodelphis
sp. (Opossum) : ENSMODT00000018786
Oryzias
sp. (Medaka) : ENSORLT00000019034
Pongo
sp. (Orangutan) : ENSPPYT00000014705
Takifugu
sp. (Fugu) : SINFRUT00000134446
Macaca
sp. (Macaque) : XM_001090608
Equus
sp. (Horse) : XM_001502362
Pan
sp. (Chimpanzee) : XM_515296
HIX0200263
HIT000200412 (
NM_003597
)
(Krueppel-like factor 11; Transforming growth factor-beta-inducible early growth response protein 2; TGFB-inducible early growth response protein 2; TIEG-2;)
genome : 10,183,682 - 10,194,963 (11,282)
query : 1 - 4,030 (4,030/4,051)
4 exons
identity = 1.000
5'(1.000;1.000;0.999;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200263)
HIX0200263
HIT000117166 (
ENST00000305883
)
(Krueppel-like factor 11; Transforming growth factor-beta-inducible early growth response protein 2; TGFB-inducible early growth response protein 2; TIEG-2;)
genome : 10,183,682 - 10,194,963 (11,282)
query : 1 - 4,030 (4,030/4,030)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200263)
HIX0200263
HIT000075837
(
AF272830
)
(Krueppel-like factor 11; Transforming growth factor-beta-inducible early growth response protein 2; TGFB-inducible early growth response protein 2; TIEG-2;)
genome : 10,183,709 - 10,192,948 (9,240)
query : 2 - 1,992 (1,991/2,021)
4 exons
identity = 0.995
5'(0.994;1.000;0.999;0.988)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200263)
HIX0200263
HIT000422613
(
AK289816
)
(Krueppel-like factor 11; Transforming growth factor-beta-inducible early growth response protein 2; TGFB-inducible early growth response protein 2; TIEG-2;)
genome : 10,183,753 - 10,193,084 (9,332)
query : 1 - 2,080 (2,080/2,080)
4 exons
identity = 0.999
5'(1.000;1.000;0.999;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200263)
HIX0200263
HIT000655230 (
NM_001177716
)
(Krueppel-like factor 11 isoform b.)
genome : 10,183,956 - 10,194,963 (11,008)
query : 1 - 3,885 (3,885/3,906)
4 exons
identity = 1.000
5'(1.000;1.000;0.999;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200263)
HIX0200263
HIT000639890 (
ENST00000540845
)
(Krueppel-like factor 11 isoform b.)
genome : 10,183,956 - 10,194,963 (11,008)
query : 1 - 3,885 (3,885/3,885)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200263)
HIX0200263
HIT000500052
(
AK316439
)
(Krueppel-like factor 11 isoform b.)
genome : 10,183,956 - 10,193,004 (9,049)
query : 1 - 1,925 (1,925/1,925)
4 exons
identity = 0.998
5'(0.983;0.996;0.999;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200263)
HIX0200263
HIT000655231 (
NM_001177718
)
(Krueppel-like factor 11 isoform b.)
genome : 10,184,372 - 10,194,963 (10,592)
query : 1 - 4,033 (4,033/4,054)
4 exons
identity = 1.000
5'(1.000;1.000;0.999;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200263)
HIX0200263
HIT000634380 (
ENST00000535335
)
(Krueppel-like factor 11 isoform b.)
genome : 10,184,372 - 10,194,963 (10,592)
query : 1 - 4,033 (4,033/4,033)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200263)
HIX0200263
HIT000497504
(
AK302880
)
(Krueppel-like factor 11 isoform b.)
genome : 10,184,407 - 10,193,129 (8,723)
query : 1 - 2,165 (2,165/2,165)
4 exons
identity = 0.998
5'(1.000;1.000;0.997;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200263)
HIX0204318
pHIT000099311 ( pHIT000099311 )
Representative transcript
(Conserved hypothetical protein.)
genome : 10,220,883 - 10,269,513 (48,631)
query : 1 - 1,467 (1,467/1,467)
12 exons
InterPro :
IPR000358 : Ribonucleotide reductase small subunit
IPR009078 : Ferritin-like superfamily
IPR012348 : Ribonucleotide reductase-related
GO :
0009186 : Biological Process : deoxyribonucleoside diphosphate metabolic process
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204318)
CAGE tag :
T02F009A2124
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK147111
Rattus
sp. (Rat) : BC099082
Bos
sp. (Cow) : BC105511
Danio
sp. (Zebrafish) : BC108037
Gallus
sp. (Chicken) : CR353642
Macaca
sp. (Macaque) : ENSMMUT00000002909
Oryzias
sp. (Medaka) : ENSORLT00000016487
Pongo
sp. (Orangutan) : ENSPPYT00000014702
Tetraodon
sp. (Tetraodon) : GSTENT00003458001
Tetraodon
sp. (Tetraodon) : GSTENT00012923001
Takifugu
sp. (Fugu) : SINFRUT00000140270
Monodelphis
sp. (Opossum) : XM_001381074
Equus
sp. (Horse) : XM_001502334
Canis
sp. (Dog) : XM_540076
Pan
sp. (Chimpanzee) : XR_024410
HIX0001816
HIT000313933 (
ENST00000360566
)
(Ribonucleoside-diphosphate reductase subunit M2; EC=1.17.4.1; Ribonucleotide reductase small chain; Ribonucleotide reductase small subunit;)
genome : 10,262,455 - 10,271,545 (9,091)
query : 1 - 3,673 (3,673/3,673)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.17.4.1
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto_nucl 7, nucl 6.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001816)
HIX0001816
HIT000654187 (
NM_001165931
)
(Ribonucleoside-diphosphate reductase subunit M2; EC=1.17.4.1; Ribonucleotide reductase small chain; Ribonucleotide reductase small subunit;)
genome : 10,262,695 - 10,271,546 (8,852)
query : 1 - 3,434 (3,434/3,452)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.17.4.1
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto_nucl 7, nucl 6.5, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001816)
HIX0001816
HIT000322329
(
X59618
)
Representative transcript
(Ribonucleoside-diphosphate reductase subunit M2; EC=1.17.4.1; Ribonucleotide reductase small chain; Ribonucleotide reductase small subunit;)
genome : 10,262,735 - 10,270,623 (7,889)
query : 4 - 2,476 (2,473/2,500)
10 exons
identity = 0.998
5'(1.000;1.000;1.000;0.991;1.000;1.000;1.000;
1.000;1.000;0.997)3'
coverage = 0.999
EC number :
EC 1.17.4.1
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
InterPro :
IPR000358 : Ribonucleotide reductase small subunit
IPR009078 : Ferritin-like superfamily
IPR012348 : Ribonucleotide reductase-related
GO :
0009186 : Biological Process : deoxyribonucleoside diphosphate metabolic process
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto_nucl 7, nucl 6.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001816)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK147111
Rattus
sp. (Rat) : BC099082
Bos
sp. (Cow) : BC105511
Danio
sp. (Zebrafish) : BC108037
Gallus
sp. (Chicken) : CR353642
Macaca
sp. (Macaque) : ENSMMUT00000002909
Oryzias
sp. (Medaka) : ENSORLT00000016487
Pongo
sp. (Orangutan) : ENSPPYT00000014702
Tetraodon
sp. (Tetraodon) : GSTENT00003458001
Tetraodon
sp. (Tetraodon) : GSTENT00012923001
Takifugu
sp. (Fugu) : SINFRUT00000140270
Monodelphis
sp. (Opossum) : XM_001381074
Equus
sp. (Horse) : XM_001502334
Canis
sp. (Dog) : XM_540076
Pan
sp. (Chimpanzee) : XR_024410
HIX0001816
HIT000320794
(
S40301
)
(Ribonucleoside-diphosphate reductase subunit M2; EC=1.17.4.1; Ribonucleotide reductase small chain; Ribonucleotide reductase small subunit;)
genome : 10,262,735 - 10,269,926 (7,192)
query : 4 - 1,778 (1,775/1,794)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;0.991;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 0.998
EC number :
EC 1.17.4.1
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
InterPro :
IPR000358 : Ribonucleotide reductase small subunit
IPR009078 : Ferritin-like superfamily
IPR012348 : Ribonucleotide reductase-related
GO :
0009186 : Biological Process : deoxyribonucleoside diphosphate metabolic process
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto_nucl 7, nucl 6.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001816)
HIX0001816
HIT000116773 (
ENST00000304567
)
(Ribonucleoside-diphosphate reductase subunit M2; EC=1.17.4.1; Ribonucleotide reductase small chain; Ribonucleotide reductase small subunit;)
genome : 10,262,857 - 10,271,545 (8,689)
query : 1 - 3,271 (3,271/3,271)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.17.4.1
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13.3333, cyto_pero 13.1667,
E.R._mito 3.5, mito 2.5, pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001816)
HIX0001816
HIT000198040 (
NM_001034
)
(Ribonucleoside-diphosphate reductase subunit M2; EC=1.17.4.1; Ribonucleotide reductase small chain; Ribonucleotide reductase small subunit;)
genome : 10,262,863 - 10,271,546 (8,684)
query : 1 - 3,266 (3,266/3,284)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.17.4.1
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13.3333, cyto_pero 13.1667,
E.R._mito 3.5, mito 2.5, pero 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001816)
HIX0001816
HIT000042883
(
AK123010
)
(Ribonucleoside-diphosphate reductase subunit M2 B; EC=1.17.4.1; TP53-inducible ribonucleotide reductase M2 B; p53-inducible ribonucleotide reductase small subunit 2-like protein; p53R2;)
genome : 10,262,866 - 10,271,545 (8,680)
query : 1 - 3,203 (3,203/3,203)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 1.17.4.1
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
InterPro :
IPR000358 : Ribonucleotide reductase small subunit
IPR009078 : Ferritin-like superfamily
IPR012348 : Ribonucleotide reductase-related
GO :
0009186 : Biological Process : deoxyribonucleoside diphosphate metabolic process
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto_mito 15.3333, mito_pero 14.8333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001816)
HIX0001816
HIT000017538
(
AK092671
)
(Ribonucleoside-diphosphate reductase subunit M2 B; EC=1.17.4.1; TP53-inducible ribonucleotide reductase M2 B; p53-inducible ribonucleotide reductase small subunit 2-like protein; p53R2;)
genome : 10,262,866 - 10,271,351 (8,486)
query : 1 - 3,039 (3,039/3,039)
10 exons
identity = 0.997
5'(0.987;0.851;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 1.17.4.1
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
InterPro :
IPR000358 : Ribonucleotide reductase small subunit
IPR009078 : Ferritin-like superfamily
IPR012348 : Ribonucleotide reductase-related
GO :
0009186 : Biological Process : deoxyribonucleoside diphosphate metabolic process
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26.5, cyto_mito 15.5, cyto_nucl 4.33333, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001816)
HIX0001816
HIT000432585
(
AK313719
)
(Ribonucleoside-diphosphate reductase subunit M2; EC=1.17.4.1; Ribonucleotide reductase small chain; Ribonucleotide reductase small subunit;)
genome : 10,262,866 - 10,269,513 (6,648)
query : 1 - 1,230 (1,230/1,230)
10 exons
identity = 0.998
5'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993)3'
coverage = 1.000
EC number :
EC 1.17.4.1
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
InterPro :
IPR000358 : Ribonucleotide reductase small subunit
IPR009078 : Ferritin-like superfamily
IPR012348 : Ribonucleotide reductase-related
GO :
0009186 : Biological Process : deoxyribonucleoside diphosphate metabolic process
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13.3333, cyto_pero 13.1667,
E.R._mito 3.5, mito 2.5, pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001816)
HIX0001816
HIT000040966
(
BC030154
)
(Ribonucleoside-diphosphate reductase subunit M2; EC=1.17.4.1; Ribonucleotide reductase small chain; Ribonucleotide reductase small subunit;)
genome : 10,262,877 - 10,269,926 (7,050)
query : 1 - 1,632 (1,632/1,653)
10 exons
identity = 0.999
5'(0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.17.4.1
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
InterPro :
IPR000358 : Ribonucleotide reductase small subunit
IPR009078 : Ferritin-like superfamily
IPR012348 : Ribonucleotide reductase-related
GO :
0009186 : Biological Process : deoxyribonucleoside diphosphate metabolic process
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13.3333, cyto_pero 13.1667,
E.R._mito 3.5, mito 2.5, pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001816)
HIX0001816
HIT000030721
(
BC001886
)
(Ribonucleoside-diphosphate reductase subunit M2; EC=1.17.4.1; Ribonucleotide reductase small chain; Ribonucleotide reductase small subunit;)
genome : 10,262,882 - 10,269,926 (7,045)
query : 1 - 1,627 (1,627/1,649)
10 exons
identity = 0.999
5'(0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.17.4.1
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
InterPro :
IPR000358 : Ribonucleotide reductase small subunit
IPR009078 : Ferritin-like superfamily
IPR012348 : Ribonucleotide reductase-related
GO :
0009186 : Biological Process : deoxyribonucleoside diphosphate metabolic process
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13.3333, cyto_pero 13.1667,
E.R._mito 3.5, mito 2.5, pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001816)
HIX0001816
HIT000578980 (
ENST00000474701
)
(Ribonucleoside-diphosphate reductase subunit M2; EC=1.17.4.1; Ribonucleotide reductase small chain; Ribonucleotide reductase small subunit;)
genome : 10,263,298 - 10,269,282 (5,985)
query : 1 - 1,060 (1,060/1,060)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.17.4.1
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15.6667, cyto_plas 10.6667, nucl 6,
mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001816)
HIX0001809
pHIT000072801 ( pHIT000072801 )
(Cleavage and polyadenylation specificity factor subunit 3; EC=3.1.27.-; Cleavage and polyadenylation specificity factor 73 kDa subunit; CPSF 73 kDa subunit; mRNA 3'-end-processing endonuclease CPSF-73;)
genome : 9,562,537 - 9,613,146 (50,610)
query : 1 - 2,181 (2,181/2,181)
18 exons
EC number :
EC 3.1.27.-
InterPro :
IPR001279 : Beta-lactamase-like
IPR011108 : RNA-metabolising metallo-beta-lactamase
IPR021718 : Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term
IPR022712 : Beta-Casp domain
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001809)
CAGE tag :
H04BA58A1204,H05BD27D0203,H10BA22G1803
H34BA62D0712,H34BA83L1704
HIX0001809
pHIT000099303 ( pHIT000099303 )
(Cleavage and polyadenylation specificity factor 73; EC=3.1.27.-;)
genome : 9,562,537 - 9,613,146 (50,610)
query : 1 - 1,938 (1,938/1,938)
16 exons
EC number :
EC 3.1.27.-
InterPro :
IPR001279 : Beta-lactamase-like
IPR011108 : RNA-metabolising metallo-beta-lactamase
IPR021718 : Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term
IPR022712 : Beta-Casp domain
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001809)
CAGE tag :
T02F0090A80F
HIX0029904
pHIT000003771 ( pHIT000003771 )
(Disintegrin and metalloproteinase domain-containing protein 17; ADAM 17; EC=3.4.24.86; Snake venom-like protease; TNF-alpha convertase; TNF-alpha-converting enzyme; AltName: CD_antigen=CD156b; Precursor;)
genome : 9,630,306 - 9,713,076 (82,771)
query : 1 - 2,019 (2,019/2,019)
15 exons
EC number :
EC 3.4.24.86
InterPro :
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029904)
CAGE tag :
H05BA93A0602,H05BB19D1603,H05BB49P0905
H06BA66J2406,H08BA16H1710
HIX0181970
pHIT000003774 ( pHIT000003774 )
Representative transcript
(Hypothetical protein.)
genome : 10,079,758 - 10,082,145 (2,388)
query : 1 - 330 (330/330)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0181970)
CAGE tag :
H05BD87C2203,H08BA14L1206,H22BB37C1403
H22BB70H1707,H22BB72C1202
HIX0204318
pHIT000099311 ( pHIT000099311 )
Representative transcript
(Conserved hypothetical protein.)
genome : 10,220,883 - 10,269,513 (48,631)
query : 1 - 1,467 (1,467/1,467)
12 exons
InterPro :
IPR000358 : Ribonucleotide reductase small subunit
IPR009078 : Ferritin-like superfamily
IPR012348 : Ribonucleotide reductase-related
GO :
0009186 : Biological Process : deoxyribonucleoside diphosphate metabolic process
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204318)
CAGE tag :
T02F009A2124
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK147111
Rattus
sp. (Rat) : BC099082
Bos
sp. (Cow) : BC105511
Danio
sp. (Zebrafish) : BC108037
Gallus
sp. (Chicken) : CR353642
Macaca
sp. (Macaque) : ENSMMUT00000002909
Oryzias
sp. (Medaka) : ENSORLT00000016487
Pongo
sp. (Orangutan) : ENSPPYT00000014702
Tetraodon
sp. (Tetraodon) : GSTENT00003458001
Tetraodon
sp. (Tetraodon) : GSTENT00012923001
Takifugu
sp. (Fugu) : SINFRUT00000140270
Monodelphis
sp. (Opossum) : XM_001381074
Equus
sp. (Horse) : XM_001502334
Canis
sp. (Dog) : XM_540076
Pan
sp. (Chimpanzee) : XR_024410
HIX0001817
pHIT000099314 ( pHIT000099314 )
(Hypothetical protein.)
genome : 10,448,750 - 10,471,710 (22,961)
query : 1 - 453 (453/453)
5 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001817)
CAGE tag :
T02F009DB801
HIX0114392
pHIT000003782 ( pHIT000003782 )
Representative transcript
(Hypothetical protein.)
genome : 10,494,525 - 10,497,628 (3,104)
query : 1 - 351 (351/351)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0114392)
CAGE tag :
H08BA02B1509,H08BA36I2306,H08BA43A0901
H09BA97I1908,H10BA71A0809
HIX0001818
pHIT000003785 ( pHIT000003785 )
(Conserved hypothetical protein.)
genome : 10,580,850 - 10,588,985 (8,136)
query : 1 - 1,548 (1,548/1,548)
12 exons
InterPro :
IPR000183 : Ornithine/DAP/Arg decarboxylase
IPR002433 : Ornithine decarboxylase
IPR009006 : Alanine racemase/group IV decarboxylase, C-terminal
IPR022643 : Orn/DAP/Arg decarboxylase 2, C-terminal
IPR022644 : Orn/DAP/Arg decarboxylase 2, N-terminal
IPR022653 : Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site
IPR022657 : Orn/DAP/Arg decarboxylase 2, conserved site
IPR029066 : PLP-binding barrel
GO :
0003824 : Molecular Function : catalytic activity
0006596 : Biological Process : polyamine biosynthetic process
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001818)
CAGE tag :
H08BA02B1509,H08BA36I2306,H08BA43A0901
H09BA97I1908,H10BA71A0809
AC112723.3
9200001-9219829 F +
NCBI
AC093904.3
9219830-9409657 F +
NCBI
AC079782.6
9409658-9493068 F +
NCBI
AC080162.7
9493069-9662721 F +
NCBI
AC092206.2
9662722-9670824 F +
NCBI
AC073195.5
9670825-9767659 F +
NCBI
AC082651.6
9767660-9969429 F +
NCBI
AC010969.11
9969430-10158177 F +
NCBI
AC104794.4
10158178-10270500 F +
NCBI
AC118058.3
10270501-10272494 F +
NCBI
AC007240.2
10272495-10475544 F +
NCBI
AC007249.5
10475545-10676029 F +
NCBI
AC007314.3
10676030-10800000 F +
NCBI