bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0007938
HIT000361925 (
ENST00000380647
)
(Centlein isoform 1.)
genome : 17,134,980 - 17,503,921 (368,942)
query : 1 - 5,576 (5,576/5,576)
26 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007938)
HIX0007938
HIT000055716
(
BX647069
)
Representative transcript
(Centlein isoform 1.)
genome : 17,135,034 - 17,503,916 (368,883)
query : 4 - 5,521 (5,518/5,530)
26 exons
identity = 0.997
5'(0.998)3'
coverage = 0.999
InterPro :
IPR003661 : Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain
GO :
0000155 : Molecular Function : phosphorelay sensor kinase activity
0007165 : Biological Process : signal transduction
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007938)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB060215
Mus
sp. (Mouse) : AK052558
Bos
sp. (Cow) : ENSBTAT00000002412
Pongo
sp. (Orangutan) : ENSPPYT00000022383
Tetraodon
sp. (Tetraodon) : GSTENT00020863001
Takifugu
sp. (Fugu) : SINFRUT00000145587
Rattus
sp. (Rat) : XM_001070679
Monodelphis
sp. (Opossum) : XM_001373253
Equus
sp. (Horse) : XM_001917483
Danio
sp. (Zebrafish) : XM_001922094
Canis
sp. (Dog) : XM_538669
Pan
sp. (Chimpanzee) : XR_023700
HIX0007938
HIT000523758 (
ENST00000425824
)
(Centlein isoform 1.)
genome : 17,135,034 - 17,503,915 (368,882)
query : 1 - 5,516 (5,516/5,516)
26 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007938)
HIX0007938
HIT000108370 (
ENST00000262360
)
(Centlein isoform 1.)
genome : 17,135,034 - 17,495,003 (359,970)
query : 1 - 4,248 (4,248/4,248)
26 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007938)
HIX0007938
HIT000206610 (
NM_017738
)
(Centlein isoform 1.)
genome : 17,135,038 - 17,503,916 (368,879)
query : 1 - 5,513 (5,513/5,522)
26 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 14.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007938)
HIX0007938
HIT000002758
(
AK000283
)
(Centlein isoform 1.)
genome : 17,273,729 - 17,503,921 (230,193)
query : 18 - 4,777 (4,760/4,790)
22 exons
identity = 0.996
5'(0.983;0.996)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 14.8333, cyto 8,
cyto_golg 5.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007938)
HIX0007939
HIT000488170
(
AK293546
)
(Endophilin-A2; Endophilin-2; SH3 domain-containing GRB2-like protein 2; SH3p8;)
genome : 17,578,953 - 17,795,932 (216,980)
query : 2 - 1,026 (1,025/1,026)
5 exons
identity = 0.991
5'(0.994;0.957;0.971;0.992;1.000)3'
coverage = 0.999
InterPro :
IPR001452 : SH3 domain
IPR004148 : BAR domain
IPR013315 : Spectrin alpha chain, SH3 domain
IPR027267 : Arfaptin homology (AH) domain/BAR domain
IPR028501 : Endophilin-A
GO :
0005515 : Molecular Function : protein binding
0005737 : Cellular Component : cytoplasm
0006897 : Biological Process : endocytosis
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11.5, mito 8, nucl 4, E.R._mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007939)
HIX0007939
HIT000199894 (
NM_003026
)
(Endophilin-A1; EEN-B1; Endophilin-1; SH3 domain protein 2A; SH3 domain-containing GRB2-like protein 2;)
genome : 17,578,953 - 17,797,121 (218,169)
query : 1 - 2,727 (2,727/2,745)
9 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16, cyto 11.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007939)
HIX0007939
HIT000051066
(
BC032825
)
(Endophilin-A1.)
genome : 17,579,064 - 17,797,121 (218,058)
query : 1 - 2,492 (2,492/2,507)
9 exons
identity = 0.992
5'(0.977;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;0.991)3'
coverage = 1.000
InterPro :
IPR004148 : BAR domain
IPR027267 : Arfaptin homology (AH) domain/BAR domain
IPR028501 : Endophilin-A
GO :
0005515 : Molecular Function : protein binding
0005737 : Cellular Component : cytoplasm
0006897 : Biological Process : endocytosis
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007939)
HIX0007939
HIT000571706 (
ENST00000467085
)
(Hypothetical short protein.)
genome : 17,579,080 - 17,630,427 (51,348)
query : 1 - 282 (282/282)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007939)
HIX0007939
HIT000488216
(
AK293592
)
(Endophilin-A1.)
genome : 17,579,122 - 17,796,055 (216,934)
query : 3 - 1,464 (1,462/1,464)
9 exons
identity = 0.998
5'(0.988;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001452 : SH3 domain
IPR004148 : BAR domain
IPR013315 : Spectrin alpha chain, SH3 domain
IPR027267 : Arfaptin homology (AH) domain/BAR domain
IPR028501 : Endophilin-A
GO :
0005515 : Molecular Function : protein binding
0005737 : Cellular Component : cytoplasm
0006897 : Biological Process : endocytosis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 16, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007939)
HIX0007939
HIT000361885 (
ENST00000380607
)
(Endophilin-A1; EEN-B1; Endophilin-1; SH3 domain protein 2A; SH3 domain-containing GRB2-like protein 2;)
genome : 17,579,121 - 17,797,127 (218,007)
query : 1 - 2,565 (2,565/2,565)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007939)
HIX0007939
HIT000014351
(
AK057744
)
(Endophilin-A1.)
genome : 17,579,121 - 17,797,120 (218,000)
query : 1 - 1,414 (1,414/1,414)
3 exons
identity = 0.996
5'(0.982;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR004148 : BAR domain
IPR028501 : Endophilin-A
GO :
0005515 : Molecular Function : protein binding
0005737 : Cellular Component : cytoplasm
0006897 : Biological Process : endocytosis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, mito 8, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007939)
HIX0007939
HIT000431266
(
AK312400
)
(Endophilin-A1; EEN-B1; Endophilin-1; SH3 domain protein 2A; SH3 domain-containing GRB2-like protein 2;)
genome : 17,579,121 - 17,795,741 (216,621)
query : 1 - 1,179 (1,179/1,179)
9 exons
identity = 0.998
5'(0.988;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR004148 : BAR domain
IPR013315 : Spectrin alpha chain, SH3 domain
IPR027267 : Arfaptin homology (AH) domain/BAR domain
IPR028501 : Endophilin-A
GO :
0005515 : Molecular Function : protein binding
0005737 : Cellular Component : cytoplasm
0006897 : Biological Process : endocytosis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007939)
HIX0007939
HIT000063326
(
AF036268
)
Representative transcript
(Endophilin-A1; EEN-B1; Endophilin-1; SH3 domain protein 2A; SH3 domain-containing GRB2-like protein 2;)
genome : 17,579,194 - 17,797,121 (217,928)
query : 1 - 2,484 (2,484/2,540)
9 exons
identity = 0.996
5'(0.989;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994)3'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR004148 : BAR domain
IPR013315 : Spectrin alpha chain, SH3 domain
IPR027267 : Arfaptin homology (AH) domain/BAR domain
IPR028501 : Endophilin-A
GO :
0005515 : Molecular Function : protein binding
0005737 : Cellular Component : cytoplasm
0006897 : Biological Process : endocytosis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007939)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF009603
Gallus
sp. (Chicken) : AJ439350
Mus
sp. (Mouse) : AK035210
Danio
sp. (Zebrafish) : BC044199
Bos
sp. (Cow) : BC123532
Equus
sp. (Horse) : ENSECAT00000010406
Oryzias
sp. (Medaka) : ENSORLT00000008948
Oryzias
sp. (Medaka) : ENSORLT00000018713
Tetraodon
sp. (Tetraodon) : GSTENT00020865001
Takifugu
sp. (Fugu) : SINFRUT00000145585
Macaca
sp. (Macaque) : XM_001102732
Monodelphis
sp. (Opossum) : XM_001373296
Pan
sp. (Chimpanzee) : XM_520501
Canis
sp. (Dog) : XM_848878
HIX0007939
HIT000325227
(
X99657
)
(Endophilin-A1; EEN-B1; Endophilin-1; SH3 domain protein 2A; SH3 domain-containing GRB2-like protein 2;)
genome : 17,579,232 - 17,797,120 (217,889)
query : 1 - 2,445 (2,445/2,445)
9 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994)3'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR004148 : BAR domain
IPR013315 : Spectrin alpha chain, SH3 domain
IPR027267 : Arfaptin homology (AH) domain/BAR domain
IPR028501 : Endophilin-A
GO :
0005515 : Molecular Function : protein binding
0005737 : Cellular Component : cytoplasm
0006897 : Biological Process : endocytosis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007939)
HIX0007939
HIT000266607
(
BT019682
)
(Endophilin-A1; EEN-B1; Endophilin-1; SH3 domain protein 2A; SH3 domain-containing GRB2-like protein 2;)
genome : 17,579,241 - 17,795,741 (216,501)
query : 1 - 1,059 (1,059/1,059)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR004148 : BAR domain
IPR013315 : Spectrin alpha chain, SH3 domain
IPR027267 : Arfaptin homology (AH) domain/BAR domain
IPR028501 : Endophilin-A
GO :
0005515 : Molecular Function : protein binding
0005737 : Cellular Component : cytoplasm
0006897 : Biological Process : endocytosis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007939)
HIX0007939
HIT000268955
(
CR542086
)
(Endophilin-A1; EEN-B1; Endophilin-1; SH3 domain protein 2A; SH3 domain-containing GRB2-like protein 2;)
genome : 17,579,241 - 17,795,741 (216,501)
query : 1 - 1,059 (1,059/1,059)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR004148 : BAR domain
IPR013315 : Spectrin alpha chain, SH3 domain
IPR027267 : Arfaptin homology (AH) domain/BAR domain
IPR028501 : Endophilin-A
GO :
0005515 : Molecular Function : protein binding
0005737 : Cellular Component : cytoplasm
0006897 : Biological Process : endocytosis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007939)
HIX0007939
HIT000268971
(
CR542102
)
(Endophilin-A1; EEN-B1; Endophilin-1; SH3 domain protein 2A; SH3 domain-containing GRB2-like protein 2;)
genome : 17,579,241 - 17,795,738 (216,498)
query : 1 - 1,056 (1,056/1,056)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR004148 : BAR domain
IPR013315 : Spectrin alpha chain, SH3 domain
IPR027267 : Arfaptin homology (AH) domain/BAR domain
IPR028501 : Endophilin-A
GO :
0005515 : Molecular Function : protein binding
0005737 : Cellular Component : cytoplasm
0006897 : Biological Process : endocytosis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007939)
HIX0007939
HIT000328713
(
AB206840
)
(Endophilin-A1.)
genome : 17,579,241 - 17,791,332 (212,092)
query : 1 - 728 (728/744)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.978
InterPro :
IPR004148 : BAR domain
IPR027267 : Arfaptin homology (AH) domain/BAR domain
IPR028501 : Endophilin-A
GO :
0005515 : Molecular Function : protein binding
0005737 : Cellular Component : cytoplasm
0006897 : Biological Process : endocytosis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007939)
HIX0169875
HIT000526900 (
ENST00000428966
)
(Conserved hypothetical protein.)
genome : 17,589,159 - 17,591,316 (2,158)
query : 1 - 2,007 (2,007/2,007)
2 exons
identity = 0.998
3'(1.000;0.990)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 12, nucl 9.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169875)
HIX0007939
HIT000497196
(
AK302572
)
(Endophilin-A1.)
genome : 17,735,701 - 17,790,395 (54,695)
query : 1 - 1,535 (1,535/1,535)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR004148 : BAR domain
IPR027267 : Arfaptin homology (AH) domain/BAR domain
IPR028501 : Endophilin-A
GO :
0005515 : Molecular Function : protein binding
0005737 : Cellular Component : cytoplasm
0006897 : Biological Process : endocytosis
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 13, cyto 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007939)
HIX0007939
HIT000496897
(
AK302273
)
(Endophilin-A1.)
genome : 17,735,713 - 17,795,822 (60,110)
query : 1 - 1,282 (1,282/1,282)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR004148 : BAR domain
IPR027267 : Arfaptin homology (AH) domain/BAR domain
IPR028501 : Endophilin-A
GO :
0005515 : Molecular Function : protein binding
0005737 : Cellular Component : cytoplasm
0006897 : Biological Process : endocytosis
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13.6667, cyto_plas 10, nucl 7.5,
mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007939)
HIX0007939
HIT000636436 (
ENST00000537391
)
(Endophilin-A1.)
genome : 17,735,713 - 17,795,822 (60,110)
query : 1 - 1,282 (1,282/1,282)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13.6667, cyto_plas 10, nucl 7.5,
mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007939)
HIX0007939
HIT000054858
(
BX538074
)
(Endophilin-A1.)
genome : 17,786,201 - 17,797,121 (10,921)
query : 1 - 2,430 (2,430/2,450)
6 exons
identity = 0.999
5'(1.000;0.993;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR004148 : BAR domain
IPR013315 : Spectrin alpha chain, SH3 domain
IPR027267 : Arfaptin homology (AH) domain/BAR domain
IPR028501 : Endophilin-A
GO :
0005515 : Molecular Function : protein binding
0005737 : Cellular Component : cytoplasm
0006897 : Biological Process : endocytosis
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13.5, nucl 7.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007939)
AL590377.4
17488040-17499085 F +
NCBI
AL133214.12
17499086-17651706 F +
NCBI
AL139115.5
17651707-17799688 F +
NCBI
AL645565.3
17799689-17888039 F +
NCBI