bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0008098
HIT000079329
(
AF417578
)
Representative transcript
(Transmembrane channel-like protein 1; Transmembrane cochlear-expressed protein 1;)
genome : 75,136,717 - 75,451,267 (314,551)
query : 1 - 3,201 (3,201/3,201)
24 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR012496 : TMC
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008098)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF417579
Takifugu
sp. (Fugu) : AY263167
Gallus
sp. (Chicken) : AY581308
Oryzias
sp. (Medaka) : ENSORLT00000015419
Oryzias
sp. (Medaka) : ENSORLT00000015431
Pongo
sp. (Orangutan) : ENSPPYT00000022492
Tetraodon
sp. (Tetraodon) : GSTENT00026532001
Macaca
sp. (Macaque) : XM_001093188
Monodelphis
sp. (Opossum) : XM_001373198
Equus
sp. (Horse) : XM_001489392
Rattus
sp. (Rat) : XM_342033
Pan
sp. (Chimpanzee) : XM_528322
Canis
sp. (Dog) : XM_541284
Bos
sp. (Cow) : XM_618611
Danio
sp. (Zebrafish) : XM_690529
HIX0008098
HIT000114899 (
ENST00000297784
)
(Transmembrane channel-like protein 1; Transmembrane cochlear-expressed protein 1;)
genome : 75,136,717 - 75,451,267 (314,551)
query : 1 - 3,201 (3,201/3,201)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008098)
HIX0008098
HIT000212485 (
NM_138691
)
(Transmembrane channel-like protein 1; Transmembrane cochlear-expressed protein 1;)
genome : 75,136,717 - 75,451,267 (314,551)
query : 1 - 3,201 (3,201/3,201)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008098)
HIX0008098
HIT000426327
(
AK307461
)
(Transmembrane channel-like protein 1; Transmembrane cochlear-expressed protein 1;)
genome : 75,192,855 - 75,445,427 (252,573)
query : 1 - 2,454 (2,454/2,454)
20 exons
identity = 0.998
5'(1.000;1.000;1.000;0.985;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR012496 : TMC
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008098)
HIX0008098
HIT000132649 (
ENST00000340019
)
(Transmembrane channel-like protein 1; Transmembrane cochlear-expressed protein 1;)
genome : 75,229,616 - 75,451,267 (221,652)
query : 1 - 3,090 (3,090/3,090)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008098)
HIX0008098
HIT000337507
(
BC103955
)
(Transmembrane channel-like protein 1; Transmembrane cochlear-expressed protein 1;)
genome : 75,242,936 - 75,450,977 (208,042)
query : 1 - 2,477 (2,477/2,479)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR012496 : TMC
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, E.R. 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008098)
HIX0008098
HIT000337508
(
BC103956
)
(Transmembrane channel-like protein 1; Transmembrane cochlear-expressed protein 1;)
genome : 75,242,936 - 75,450,977 (208,042)
query : 1 - 2,273 (2,273/2,275)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.999
InterPro :
IPR012496 : TMC
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008098)
HIX0008098
HIT000340677
(
BC114449
)
(Transmembrane channel-like protein 1; Transmembrane cochlear-expressed protein 1;)
genome : 75,242,936 - 75,450,977 (208,042)
query : 1 - 2,514 (2,514/2,514)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR012496 : TMC
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008098)
HIX0008098
HIT000387249
(
BC114380
)
(Transmembrane channel-like protein 1; Transmembrane cochlear-expressed protein 1;)
genome : 75,242,936 - 75,450,977 (208,042)
query : 1 - 2,221 (2,221/2,221)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR012496 : TMC
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008098)
HIX0008098
HIT000435215
(
BC141860
)
(Transmembrane channel-like protein 1; Transmembrane cochlear-expressed protein 1;)
genome : 75,242,936 - 75,450,976 (208,041)
query : 1 - 2,220 (2,220/2,220)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR012496 : TMC
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008098)
HIX0008098
HIT000479590 (
ENST00000396237
)
(Transmembrane channel-like protein 1; Transmembrane cochlear-expressed protein 1;)
genome : 75,303,620 - 75,450,977 (147,358)
query : 12 - 2,371 (2,360/2,371)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.995
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008098)
HIX0008098
HIT000023437
(
AK098607
)
(Transmembrane channel-like protein 1; Transmembrane cochlear-expressed protein 1;)
genome : 75,406,954 - 75,451,236 (44,283)
query : 1 - 1,528 (1,528/1,528)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;0.981;1.000)3'
coverage = 1.000
InterPro :
IPR012496 : TMC
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, cysk 5, nucl 4, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008098)
HIX0008098
HIT000590171 (
ENST00000486417
)
(Transmembrane channel-like protein 1; Transmembrane cochlear-expressed protein 1;)
genome : 75,406,954 - 75,451,236 (44,283)
query : 1 - 1,528 (1,528/1,528)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, cysk 5, nucl 4, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008098)
HIX0008098
HIT000573976 (
ENST00000469455
)
(Transmembrane channel-like protein 1; Transmembrane cochlear-expressed protein 1;)
genome : 75,423,799 - 75,445,435 (21,637)
query : 1 - 679 (679/679)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008098)
HIX0169253
HIT000551721 (
ENST00000453787
)
(Hypothetical short protein.)
genome : 75,486,644 - 75,489,025 (2,382)
query : 1 - 583 (583/583)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 5.5, cyto_nucl 5.16667, cyto_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169253)
HIX0169253
HIT000547169 (
ENST00000449235
)
(Conserved hypothetical protein.)
genome : 75,486,644 - 75,489,014 (2,371)
query : 1 - 628 (628/628)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, extr 3, nucl 3, cyto 2, pero 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169253)
HIX0169253
HIT000521105 (
ENST00000423171
)
(Hypothetical short protein.)
genome : 75,486,644 - 75,488,984 (2,341)
query : 1 - 594 (594/594)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 5.5, cyto_nucl 5.16667, cyto_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169253)
HIX0008099
HIT000030461
(
BC001505
)
(Retinal dehydrogenase 1; RALDH 1; RalDH1; EC=1.2.1.36; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic;)
genome : 75,515,587 - 75,567,941 (52,355)
query : 1 - 2,068 (2,068/2,088)
13 exons
identity = 1.000
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.2.1.36
KEGG pathway :
00830 : Retinol metabolism (13)
01100 : Metabolic pathways (1346)
InterPro :
IPR015590 : Aldehyde dehydrogenase domain
IPR016160 : Aldehyde dehydrogenase, cysteine active site
IPR016161 : Aldehyde/histidinol dehydrogenase
IPR016162 : Aldehyde dehydrogenase N-terminal domain
IPR016163 : Aldehyde dehydrogenase, C-terminal
IPR029510 : Aldehyde dehydrogenase, glutamic acid active site
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0016620 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cysk 4, nucl 2, cysk_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008099)
HIX0008099
HIT000197711 (
NM_000689
)
(Retinal dehydrogenase 1; RALDH 1; RalDH1; EC=1.2.1.36; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic;)
genome : 75,515,578 - 75,568,233 (52,656)
query : 1 - 2,369 (2,369/2,378)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.2.1.36
KEGG pathway :
00830 : Retinol metabolism (13)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cysk 4, nucl 2, cysk_plas 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008099)
HIX0008099
HIT000002593
(
AK000118
)
(Retinal dehydrogenase 1; RALDH 1; RalDH1; EC=1.2.1.36; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic;)
genome : 75,515,587 - 75,567,960 (52,374)
query : 1 - 2,087 (2,087/2,105)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.991;
0.992;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.2.1.36
KEGG pathway :
00830 : Retinol metabolism (13)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cysk 4, nucl 2, cysk_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008099)
HIX0008099
HIT000009915
(
AK026641
)
Representative transcript
(Retinal dehydrogenase 1; RALDH 1; RalDH1; EC=1.2.1.36; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic;)
genome : 75,515,586 - 75,567,960 (52,375)
query : 1 - 2,088 (2,088/2,105)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.990;1.000;
1.000;1.000;1.000;0.993;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.2.1.36
KEGG pathway :
00830 : Retinol metabolism (13)
01100 : Metabolic pathways (1346)
InterPro :
IPR015590 : Aldehyde dehydrogenase domain
IPR016160 : Aldehyde dehydrogenase, cysteine active site
IPR016161 : Aldehyde/histidinol dehydrogenase
IPR016162 : Aldehyde dehydrogenase N-terminal domain
IPR016163 : Aldehyde dehydrogenase, C-terminal
IPR029510 : Aldehyde dehydrogenase, glutamic acid active site
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0016620 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cysk 4, nucl 2, cysk_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008099)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169580
Takifugu
sp. (Fugu) : AB197675
Rattus
sp. (Rat) : AF001898
Bos
sp. (Cow) : BC105193
Pongo
sp. (Orangutan) : CR860845
Danio
sp. (Zebrafish) : DQ105978
Oryzias
sp. (Medaka) : DQ897366
Equus
sp. (Horse) : ENSECAT00000021328
Monodelphis
sp. (Opossum) : ENSMODT00000002886
Rattus
sp. (Rat) : ENSRNOT00000054787
Mus
sp. (Mouse) : M74570
Mus
sp. (Mouse) : U96401
Gallus
sp. (Chicken) : X58869
Pan
sp. (Chimpanzee) : XM_001142666
Monodelphis
sp. (Opossum) : XM_001373122
Monodelphis
sp. (Opossum) : XM_001373162
Canis
sp. (Dog) : XM_533525
HIX0008099
HIT000114900 (
ENST00000297785
)
(Retinal dehydrogenase 1; RALDH 1; RalDH1; EC=1.2.1.36; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic;)
genome : 75,515,578 - 75,567,971 (52,394)
query : 1 - 2,107 (2,107/2,107)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.2.1.3
,
EC 1.2.1.36
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00040 : Pentose and glucuronate interconversions (57)
00053 : Ascorbate and aldarate metabolism (38)
00071 : Fatty acid metabolism (28)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00330 : Arginine and proline metabolism (98)
00340 : Histidine metabolism (33)
00380 : Tryptophan metabolism (54)
00410 : beta-Alanine metabolism (34)
00561 : Glycerolipid metabolism (35)
00620 : Pyruvate metabolism (62)
00625 : Chloroalkane and chloroalkene degradation (15)
00640 : Propanoate metabolism (45)
00830 : Retinol metabolism (13)
00903 : Limonene and pinene degradation (16)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cysk 4, nucl 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008099)
HIX0008099
HIT000329756
(
AB209821
)
(Retinal dehydrogenase 1; RALDH 1; RalDH1; EC=1.2.1.36; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic;)
genome : 75,515,588 - 75,567,959 (52,372)
query : 1 - 2,086 (2,086/2,086)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;0.995;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.2.1.36
KEGG pathway :
00830 : Retinol metabolism (13)
01100 : Metabolic pathways (1346)
InterPro :
IPR015590 : Aldehyde dehydrogenase domain
IPR016160 : Aldehyde dehydrogenase, cysteine active site
IPR016161 : Aldehyde/histidinol dehydrogenase
IPR016162 : Aldehyde dehydrogenase N-terminal domain
IPR016163 : Aldehyde dehydrogenase, C-terminal
IPR029510 : Aldehyde dehydrogenase, glutamic acid active site
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0016620 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cysk 4, nucl 2, cysk_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008099)
HIX0008099
HIT000191401
(
K03000
)
(Retinal dehydrogenase 1; RALDH 1; RalDH1; EC=1.2.1.36; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic;)
genome : 75,515,589 - 75,540,528 (24,940)
query : 22 - 1,559 (1,538/1,560)
8 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.986
EC number :
EC 1.2.1.36
KEGG pathway :
00830 : Retinol metabolism (13)
01100 : Metabolic pathways (1346)
InterPro :
IPR015590 : Aldehyde dehydrogenase domain
IPR016160 : Aldehyde dehydrogenase, cysteine active site
IPR016161 : Aldehyde/histidinol dehydrogenase
IPR016162 : Aldehyde dehydrogenase N-terminal domain
IPR016163 : Aldehyde dehydrogenase, C-terminal
IPR029510 : Aldehyde dehydrogenase, glutamic acid active site
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0016620 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 10, cyto 7, cyto_pero 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008099)
HIX0008099
HIT000487800
(
AK293176
)
(Retinal dehydrogenase 1; RALDH 1; RalDH1; EC=1.2.1.36; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic;)
genome : 75,515,776 - 75,695,358 (179,583)
query : 1 - 1,864 (1,864/1,864)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.2.1.36
KEGG pathway :
00830 : Retinol metabolism (13)
01100 : Metabolic pathways (1346)
InterPro :
IPR015590 : Aldehyde dehydrogenase domain
IPR016160 : Aldehyde dehydrogenase, cysteine active site
IPR016161 : Aldehyde/histidinol dehydrogenase
IPR016162 : Aldehyde dehydrogenase N-terminal domain
IPR016163 : Aldehyde dehydrogenase, C-terminal
IPR029510 : Aldehyde dehydrogenase, glutamic acid active site
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0016620 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27.5, cyto_nucl 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008099)
HIX0008099
HIT000496792
(
AK302168
)
(Retinal dehydrogenase 1; RALDH 1; RalDH1; EC=1.2.1.36; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic;)
genome : 75,515,948 - 75,567,969 (52,022)
query : 1 - 1,454 (1,454/1,454)
11 exons
identity = 0.992
3'(1.000;1.000;0.994;1.000;1.000;1.000;1.000;
0.924;0.973;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.2.1.36
KEGG pathway :
00830 : Retinol metabolism (13)
01100 : Metabolic pathways (1346)
InterPro :
IPR015590 : Aldehyde dehydrogenase domain
IPR016160 : Aldehyde dehydrogenase, cysteine active site
IPR016161 : Aldehyde/histidinol dehydrogenase
IPR016162 : Aldehyde dehydrogenase N-terminal domain
IPR016163 : Aldehyde dehydrogenase, C-terminal
IPR029510 : Aldehyde dehydrogenase, glutamic acid active site
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0016620 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10.8333, cyto_plas 9.16667,
cysk 9, cyto_mito 9, cyto_pero 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008099)
HIX0008099
HIT000061709
(
AF003341
)
(Retinal dehydrogenase 1; RALDH 1; RalDH1; EC=1.2.1.36; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic;)
genome : 75,516,124 - 75,567,916 (51,793)
query : 1 - 1,506 (1,506/1,506)
13 exons
identity = 0.998
3'(1.000;0.987;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;0.993;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.2.1.3
,
EC 1.2.1.36
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00040 : Pentose and glucuronate interconversions (57)
00053 : Ascorbate and aldarate metabolism (38)
00071 : Fatty acid metabolism (28)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00330 : Arginine and proline metabolism (98)
00340 : Histidine metabolism (33)
00380 : Tryptophan metabolism (54)
00410 : beta-Alanine metabolism (34)
00561 : Glycerolipid metabolism (35)
00620 : Pyruvate metabolism (62)
00625 : Chloroalkane and chloroalkene degradation (15)
00640 : Propanoate metabolism (45)
00830 : Retinol metabolism (13)
00903 : Limonene and pinene degradation (16)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR015590 : Aldehyde dehydrogenase domain
IPR016160 : Aldehyde dehydrogenase, cysteine active site
IPR016161 : Aldehyde/histidinol dehydrogenase
IPR016162 : Aldehyde dehydrogenase N-terminal domain
IPR016163 : Aldehyde dehydrogenase, C-terminal
IPR029510 : Aldehyde dehydrogenase, glutamic acid active site
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0016620 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 12.5, cysk 4, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008099)
HIX0008099
HIT000099841
(
BT006921
)
(Retinal dehydrogenase 1; RALDH 1; RalDH1; EC=1.2.1.36; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic;)
genome : 75,516,125 - 75,567,916 (51,792)
query : 1 - 1,505 (1,505/1,506)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 1.2.1.36
KEGG pathway :
00830 : Retinol metabolism (13)
01100 : Metabolic pathways (1346)
InterPro :
IPR015590 : Aldehyde dehydrogenase domain
IPR016160 : Aldehyde dehydrogenase, cysteine active site
IPR016161 : Aldehyde/histidinol dehydrogenase
IPR016162 : Aldehyde dehydrogenase N-terminal domain
IPR016163 : Aldehyde dehydrogenase, C-terminal
IPR029510 : Aldehyde dehydrogenase, glutamic acid active site
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0016620 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cysk 4, nucl 2, cysk_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008099)
HIX0008099
HIT000253477
(
AY390731
)
(Retinal dehydrogenase 1; RALDH 1; RalDH1; EC=1.2.1.36; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic;)
genome : 75,516,124 - 75,567,916 (51,793)
query : 1 - 1,506 (1,506/1,506)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.2.1.5
,
EC 1.2.1.36
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00340 : Histidine metabolism (33)
00350 : Tyrosine metabolism (57)
00360 : Phenylalanine metabolism (62)
00410 : beta-Alanine metabolism (34)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR015590 : Aldehyde dehydrogenase domain
IPR016160 : Aldehyde dehydrogenase, cysteine active site
IPR016161 : Aldehyde/histidinol dehydrogenase
IPR016162 : Aldehyde dehydrogenase N-terminal domain
IPR016163 : Aldehyde dehydrogenase, C-terminal
IPR029510 : Aldehyde dehydrogenase, glutamic acid active site
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0016620 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cysk 4, nucl 2, cysk_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008099)
HIX0008099
HIT000195084
(
M26761
)
(Retinal dehydrogenase 1; RALDH 1; RalDH1; EC=1.2.1.36; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic;)
genome : 75,516,124 - 75,540,528 (24,405)
query : 22 - 1,023 (1,002/1,023)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.979
EC number :
EC 1.2.1.36
KEGG pathway :
00830 : Retinol metabolism (13)
01100 : Metabolic pathways (1346)
InterPro :
IPR015590 : Aldehyde dehydrogenase domain
IPR016160 : Aldehyde dehydrogenase, cysteine active site
IPR016161 : Aldehyde/histidinol dehydrogenase
IPR016162 : Aldehyde dehydrogenase N-terminal domain
IPR016163 : Aldehyde dehydrogenase, C-terminal
IPR029510 : Aldehyde dehydrogenase, glutamic acid active site
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0016620 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 10, cyto 7, cyto_pero 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008099)
HIX0008099
HIT000358219 (
ENST00000376939
)
(Retinal dehydrogenase 1; RALDH 1; RalDH1; EC=1.2.1.36; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic;)
genome : 75,531,885 - 75,567,972 (36,088)
query : 1 - 822 (822/822)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.2.1.36
KEGG pathway :
00830 : Retinol metabolism (13)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 11.3333, cysk 10, cyto_plas 8.5,
nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008099)
HIX0008099
HIT000586156 (
ENST00000482210
)
(Retinal dehydrogenase 1; RALDH 1; RalDH1; EC=1.2.1.36; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic;)
genome : 75,538,765 - 75,567,878 (29,114)
query : 1 - 879 (879/879)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.2.1.36
KEGG pathway :
00830 : Retinol metabolism (13)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_pero 12.1667, cyto_nucl 11.8333,
extr 4, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008099)
HIX0008099
HIT000517893 (
ENST00000419959
)
(Retinal dehydrogenase 1; RALDH 1; RalDH1; EC=1.2.1.36; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic;)
genome : 75,538,966 - 75,695,358 (156,393)
query : 1 - 806 (806/806)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.2.1.36
KEGG pathway :
00830 : Retinol metabolism (13)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 13, cyto 12, cyto_nucl 9.83333, cyto_plas 7,
nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008099)
HIX0008099
HIT000544880 (
ENST00000446946
)
(Retinal dehydrogenase 1; RALDH 1; RalDH1; EC=1.2.1.36; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic;)
genome : 75,540,424 - 75,653,638 (113,215)
query : 1 - 805 (805/805)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.2.1.36
KEGG pathway :
00830 : Retinol metabolism (13)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12.3333, cyto_plas 9.66667,
cysk 6, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008099)
HIX0008099
HIT000596567 (
ENST00000493113
)
(Retinal dehydrogenase 1; RALDH 1; RalDH1; EC=1.2.1.36; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic;)
genome : 75,541,899 - 75,567,883 (25,985)
query : 1 - 604 (604/604)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.2.1.36
KEGG pathway :
00830 : Retinol metabolism (13)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12.8333, cyto_pero 11.8333,
extr 5, pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008099)
HIX0169682
HIT000514596 (
ENST00000416662
)
(Cytochrome P450 family protein.)
genome : 75,657,661 - 75,671,444 (13,784)
query : 1 - 1,433 (1,433/1,433)
6 exons
identity = 0.996
5'(1.000;1.000;1.000;0.955;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 10.5, mito 8, extr 7, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169682)
HIX0008099
HIT000596754 (
ENST00000493311
)
(Hypothetical short protein.)
genome : 75,668,971 - 75,695,311 (26,341)
query : 1 - 209 (209/209)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 7, mito 7, cyto_mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008099)
HIX0035115
HIT000097753
(
BC043560
)
Representative transcript
(Conserved hypothetical protein.)
genome : 75,705,767 - 75,839,108 (133,342)
query : 1 - 1,642 (1,642/1,705)
3 exons
identity = 0.999
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035115)
HIX0218522
HIT000430550
(
AK311684
)
Representative transcript
(Conserved hypothetical protein.)
genome : 75,766,781 - 75,775,149 (8,369)
query : 1 - 969 (969/969)
2 exons
identity = 0.996
5'(0.984;0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, extr 11, cyto_nucl 9, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218522)
HIX0218522
HIT000573195 (
ENST00000468639
)
(Annexin, type I family protein.)
genome : 75,766,781 - 75,774,795 (8,015)
query : 1 - 800 (800/800)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 11.5, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218522)
HIX0218578
HIT000006604
(
AK023330
)
Representative transcript
(Conserved hypothetical protein.)
genome : 75,767,524 - 75,769,378 (1,855)
query : 1 - 1,855 (1,855/1,869)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.993
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, mito 8, pero 4, nucl 3, cyto 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218578)
HIX0218546
HIT000599071 (
ENST00000495713
)
(Annexin family protein.)
genome : 75,775,179 - 75,782,785 (7,607)
query : 1 - 905 (905/905)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 12.5, extr 4, mito 2, pero 2,
extr_plas 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218546)
HIX0218546
HIT000592724 (
ENST00000489109
)
(Annexin family protein.)
genome : 75,775,201 - 75,780,449 (5,249)
query : 1 - 738 (738/749)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15, nucl 7.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218546)
HIX0218486
HIT000089676
(
BC018683
)
Representative transcript
(Annexin family protein.)
genome : 75,783,014 - 75,785,307 (2,294)
query : 4 - 1,407 (1,404/1,437)
2 exons
identity = 0.995
5'(0.993;1.000)3'
coverage = 0.996
InterPro :
IPR001464 : Annexin
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12, extr 9, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218486)
HIX0218486
HIT000594726 (
ENST00000491192
)
(Annexin family protein.)
genome : 75,783,014 - 75,785,309 (2,296)
query : 1 - 1,400 (1,400/1,400)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11.3333, cyto_plas 9.83333, extr 6,
nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218486)
HIX0218486
HIT000093354
(
BC034157
)
(Annexin family protein.)
genome : 75,783,799 - 75,785,308 (1,510)
query : 4 - 617 (614/723)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.995
InterPro :
IPR001464 : Annexin
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11.3333, cyto_plas 9.83333, extr 6,
nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218486)
HIX0008100
HIT000107103 (
ENST00000257497
)
(Annexin, type I family protein.)
genome : 75,766,673 - 75,785,309 (18,637)
query : 1 - 1,509 (1,509/1,509)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17.5, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008100)
HIX0008100
HIT000197722 (
NM_000700
)
(Annexin, type I family protein.)
genome : 75,766,781 - 75,785,307 (18,527)
query : 1 - 1,399 (1,399/1,399)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.991;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17.5, nucl 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008100)
HIX0008100
HIT000486570
(
X05908
)
Representative transcript
(Annexin A1; Annexin I; Annexin-1; Calpactin II; Calpactin-2; Chromobindin-9; Lipocortin I; Phospholipase A2 inhibitory protein; p35;)
genome : 75,766,781 - 75,785,307 (18,527)
query : 1 - 1,399 (1,399/1,399)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.991;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR002388 : Annexin, type I
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0004859 : Molecular Function : phospholipase inhibitor activity
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17.5, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008100)
HIX0008100
HIT000051574
(
BC035993
)
(Annexin A1; Annexin I; Annexin-1; Calpactin II; Calpactin-2; Chromobindin-9; Lipocortin I; Phospholipase A2 inhibitory protein; p35;)
genome : 75,766,781 - 75,785,264 (18,484)
query : 1 - 1,356 (1,356/1,385)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.991;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR002388 : Annexin, type I
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0004859 : Molecular Function : phospholipase inhibitor activity
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17.5, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008100)
HIX0008100
HIT000491432
(
AK296808
)
(Annexin A1; Annexin I; Annexin-1; Calpactin II; Calpactin-2; Chromobindin-9; Lipocortin I; Phospholipase A2 inhibitory protein; p35;)
genome : 75,766,781 - 75,782,928 (16,148)
query : 1 - 1,441 (1,441/1,441)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR002388 : Annexin, type I
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0004859 : Molecular Function : phospholipase inhibitor activity
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 8, mito 3, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008100)
HIX0008100
HIT000554577 (
ENST00000456643
)
(Annexin, type I family protein.)
genome : 75,766,781 - 75,778,416 (11,636)
query : 1 - 799 (799/799)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, mito 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008100)
HIX0008100
HIT000030281
(
BC001275
)
(Annexin A1; Annexin I; Annexin-1; Calpactin II; Calpactin-2; Chromobindin-9; Lipocortin I; Phospholipase A2 inhibitory protein; p35;)
genome : 75,766,803 - 75,785,308 (18,506)
query : 1 - 1,378 (1,378/1,408)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR002388 : Annexin, type I
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0004859 : Molecular Function : phospholipase inhibitor activity
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17.5, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008100)
HIX0008100
HIT000513358 (
ENST00000415424
)
(Annexin, type I family protein.)
genome : 75,766,818 - 75,775,254 (8,437)
query : 1 - 526 (526/526)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 16.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008100)
HIX0008100
HIT000015260
(
AK074480
)
(Annexin A1; Annexin I; Annexin-1; Calpactin II; Calpactin-2; Chromobindin-9; Lipocortin I; Phospholipase A2 inhibitory protein; p35;)
genome : 75,772,570 - 75,785,308 (12,739)
query : 1 - 2,208 (2,208/2,239)
12 exons
identity = 0.999
5'(0.999;1.000;1.000;0.991;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR002388 : Annexin, type I
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0004859 : Molecular Function : phospholipase inhibitor activity
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17.5, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008100)
HIX0008100
HIT000358191 (
ENST00000376911
)
(Annexin, type I family protein.)
genome : 75,772,570 - 75,785,309 (12,740)
query : 1 - 2,209 (2,209/2,209)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17.5, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008100)
HIX0008100
HIT000266715
(
BT019896
)
(Annexin, type I family protein.)
genome : 75,773,452 - 75,785,022 (11,571)
query : 1 - 1,040 (1,040/1,041)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001464 : Annexin
IPR002388 : Annexin, type I
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0004859 : Molecular Function : phospholipase inhibitor activity
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17.5, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008100)
HIX0008100
HIT000266726
(
BT019916
)
(Annexin, type I family protein.)
genome : 75,773,452 - 75,785,022 (11,571)
query : 1 - 1,040 (1,040/1,041)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001464 : Annexin
IPR002388 : Annexin, type I
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0004859 : Molecular Function : phospholipase inhibitor activity
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17.5, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008100)
HIX0008100
HIT000266727
(
BT019917
)
(Annexin, type I family protein.)
genome : 75,773,452 - 75,785,022 (11,571)
query : 1 - 1,040 (1,040/1,041)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001464 : Annexin
IPR002388 : Annexin, type I
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0004859 : Molecular Function : phospholipase inhibitor activity
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17.5, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008100)
HIX0008100
HIT000487487
(
AB451274
)
(Annexin, type I family protein.)
genome : 75,773,452 - 75,785,023 (11,572)
query : 1 - 1,041 (1,041/1,041)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;0.991;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR002388 : Annexin, type I
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0004859 : Molecular Function : phospholipase inhibitor activity
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17.5, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008100)
HIX0008100
HIT000267181
(
CR407684
)
(Annexin, type I family protein.)
genome : 75,773,452 - 75,785,020 (11,569)
query : 1 - 1,038 (1,038/1,038)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR002388 : Annexin, type I
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0004859 : Molecular Function : phospholipase inhibitor activity
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17.5, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008100)
HIX0008100
HIT000487614
(
AB451401
)
(Annexin, type I family protein.)
genome : 75,773,452 - 75,785,020 (11,569)
query : 1 - 1,038 (1,038/1,038)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;0.991;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR002388 : Annexin, type I
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0004859 : Molecular Function : phospholipase inhibitor activity
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17.5, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008100)
AL590662.5
75405468-75412212 F +
NCBI
AL162416.13
75412213-75485821 F +
NCBI
AL591031.3
75485822-75620718 F +
NCBI
AL359997.8
75620719-75787821 F +
NCBI
AL449083.23
75787822-75805467 F +
NCBI