bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0213734
HIT000010260
(
AK026986
)
(Centrosome-associated protein 350 family protein.)
genome : 179,966,186 - 180,006,240 (40,055)
query : 1 - 3,228 (3,228/3,241)
12 exons
identity = 0.999
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR028750 : Centrosome-associated protein 350
GO :
0005813 : Cellular Component : centrosome
0008017 : Molecular Function : microtubule binding
0034453 : Biological Process : microtubule anchoring
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14.5, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213734)
HIX0001384
HIT000516163 (
ENST00000418229
)
(Centrosome-associated protein 350 family protein.)
genome : 180,010,338 - 180,022,969 (12,632)
query : 1 - 992 (992/992)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 14.5, cyto 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000593624 (
ENST00000490047
)
(Conserved hypothetical protein.)
genome : 180,010,797 - 180,017,840 (7,044)
query : 1 - 434 (434/434)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto_nucl 4.5, cyto 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000098968
(
BC048310
)
(Centrosome-associated protein 350 family protein.)
genome : 180,012,233 - 180,053,254 (41,022)
query : 1 - 1,822 (1,822/1,836)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR028750 : Centrosome-associated protein 350
GO :
0005813 : Cellular Component : centrosome
0008017 : Molecular Function : microtubule binding
0034453 : Biological Process : microtubule anchoring
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 16.5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000093162
(
BC033619
)
Representative transcript
(Centrosome-associated protein 350 family protein.)
genome : 180,022,927 - 180,080,328 (57,402)
query : 12 - 4,367 (4,356/4,404)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.997
InterPro :
IPR000938 : CAP Gly-rich domain
IPR028750 : Centrosome-associated protein 350
GO :
0005813 : Cellular Component : centrosome
0008017 : Molecular Function : microtubule binding
0034453 : Biological Process : microtubule anchoring
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 4.5, cyto_golg 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000000197
(
AB007949
)
(Conserved hypothetical protein.)
genome : 180,043,001 - 180,082,515 (39,515)
query : 63 - 6,111 (6,049/6,111)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.988;
1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.990
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000527785 (
ENST00000429851
)
(CAP Gly-rich domain containing protein.)
genome : 180,042,954 - 180,082,515 (39,562)
query : 1 - 6,096 (6,096/6,096)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000089427
(
BC017847
)
(Centrosome-associated protein 350 family protein.)
genome : 180,042,954 - 180,062,032 (19,079)
query : 1 - 1,315 (1,315/1,344)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR028750 : Centrosome-associated protein 350
GO :
0005813 : Cellular Component : centrosome
0008017 : Molecular Function : microtubule binding
0034453 : Biological Process : microtubule anchoring
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, mito_nucl 14.8333, nucl 11.5,
cyto_nucl 7.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000535179 (
ENST00000437245
)
(Centrosome-associated protein 350 family protein.)
genome : 180,049,652 - 180,053,415 (3,764)
query : 1 - 408 (408/408)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000588211 (
ENST00000484356
)
(Conserved hypothetical protein.)
genome : 180,054,715 - 180,059,883 (5,169)
query : 1 - 524 (524/524)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000045919
(
AK126046
)
(Centrosome-associated protein 350 family protein.)
genome : 180,054,739 - 180,080,327 (25,589)
query : 1 - 3,549 (3,549/3,549)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000938 : CAP Gly-rich domain
IPR028750 : Centrosome-associated protein 350
GO :
0005813 : Cellular Component : centrosome
0008017 : Molecular Function : microtubule binding
0034453 : Biological Process : microtubule anchoring
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 18.5, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000593713 (
ENST00000490141
)
(CAP Gly-rich domain containing protein.)
genome : 180,054,739 - 180,080,327 (25,589)
query : 1 - 3,549 (3,549/3,549)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 18.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000006087
(
AK022813
)
(Centrosome-associated protein 350 family protein.)
genome : 180,062,849 - 180,082,515 (19,667)
query : 1 - 2,724 (2,724/2,724)
6 exons
identity = 0.999
5'(0.999;0.998;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000938 : CAP Gly-rich domain
IPR028750 : Centrosome-associated protein 350
GO :
0005813 : Cellular Component : centrosome
0008017 : Molecular Function : microtubule binding
0034453 : Biological Process : microtubule anchoring
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000514980 (
ENST00000417046
)
(Centrosome-associated protein 350 family protein.)
genome : 180,062,849 - 180,082,515 (19,667)
query : 1 - 2,724 (2,724/2,724)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0001384
HIT000599761 (
ENST00000496440
)
(Conserved hypothetical protein.)
genome : 180,064,282 - 180,080,166 (15,885)
query : 1 - 765 (765/765)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 17.5, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001384)
HIX0214110
HIT000083087
(
AY007149
)
Representative transcript
(Conserved hypothetical protein.)
genome : 180,082,861 - 180,084,009 (1,149)
query : 1 - 1,149 (1,149/1,168)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 3, pero 2.5, mito_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214110)
HIX0214276
HIT000679930 (
ENST00000566904
)
(Conserved hypothetical protein.)
genome : 180,086,275 - 180,093,025 (6,751)
query : 1 - 506 (506/506)
3 exons
identity = 0.992
3'(1.000;0.985;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214276)
HIX0001385
HIT000199701 (
NM_002826
)
(Sulfhydryl oxidase 1; hQSOX; EC=1.8.3.2; Quiescin Q6; Precursor;)
genome : 180,123,968 - 180,167,169 (43,202)
query : 1 - 3,316 (3,316/3,316)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.8.3.2
SOSUI :
SOLUBLE PROTEIN
PSORT :
golg 13, extr 7, lyso 7, E.R. 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000315820 (
NM_001004128
)
(Sulfhydryl oxidase 1 isoform b precursor.)
genome : 180,123,968 - 180,167,169 (43,202)
query : 1 - 2,583 (2,583/2,583)
13 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.991;0.994)3'
coverage = 1.000
EC number :
EC 1.8.3.2
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, lyso 9, pero 3, cyto_mito 2.5, mito 2,
E.R. 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000222878
(
U97276
)
Representative transcript
(Sulfhydryl oxidase 1; hQSOX; EC=1.8.3.2; Quiescin Q6; Precursor;)
genome : 180,123,968 - 180,167,167 (43,200)
query : 1 - 3,314 (3,314/3,314)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;0.990;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.8.3.2
InterPro :
IPR012336 : Thioredoxin-like fold
IPR013766 : Thioredoxin domain
IPR017905 : ERV/ALR sulfhydryl oxidase domain
GO :
0016972 : Molecular Function : thiol oxidase activity
0045454 : Biological Process : cell redox homeostasis
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
golg 13, extr 7, lyso 7, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF285078
Mus
sp. (Mouse) : AK169877
Bos
sp. (Cow) : ENSBTAT00000018869
Danio
sp. (Zebrafish) : ENSDART00000080656
Gallus
sp. (Chicken) : ENSGALT00000006266
Oryzias
sp. (Medaka) : ENSORLT00000021704
Pongo
sp. (Orangutan) : ENSPPYT00000000540
Takifugu
sp. (Fugu) : SINFRUT00000164185
Monodelphis
sp. (Opossum) : XM_001374361
Equus
sp. (Horse) : XM_001488615
Canis
sp. (Dog) : XM_547419
Pan
sp. (Chimpanzee) : XR_023487
HIX0001385
HIT000348882 (
ENST00000367602
)
(Sulfhydryl oxidase 1; hQSOX; EC=1.8.3.2; Quiescin Q6; Precursor;)
genome : 180,123,969 - 180,173,165 (49,197)
query : 1 - 9,311 (9,311/9,311)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.8.3.2
SOSUI :
SOLUBLE PROTEIN
PSORT :
golg 13, extr 7, lyso 7, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000423684
(
AK290887
)
(Sulfhydryl oxidase 1 isoform b precursor.)
genome : 180,124,004 - 180,166,838 (42,835)
query : 1 - 2,216 (2,216/2,216)
13 exons
identity = 0.994
5'(1.000;0.990;1.000;1.000;1.000;1.000;0.985;
1.000;1.000;0.993;1.000;0.988;0.987)3'
coverage = 1.000
EC number :
EC 1.8.3.2
InterPro :
IPR012336 : Thioredoxin-like fold
IPR013766 : Thioredoxin domain
IPR017905 : ERV/ALR sulfhydryl oxidase domain
GO :
0016972 : Molecular Function : thiol oxidase activity
0045454 : Biological Process : cell redox homeostasis
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, lyso 12, E.R. 2, pero 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000475523 (
ENST00000392029
)
(Sulfhydryl oxidase 1; hQSOX; EC=1.8.3.2; Quiescin Q6; Precursor;)
genome : 180,124,005 - 180,158,809 (34,805)
query : 1 - 1,075 (1,075/1,075)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 1.8.3.2
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000252985
(
AY358941
)
(Sulfhydryl oxidase 1; hQSOX; EC=1.8.3.2; Quiescin Q6; Precursor;)
genome : 180,124,017 - 180,167,168 (43,152)
query : 1 - 3,266 (3,266/3,266)
12 exons
identity = 0.999
5'(0.997;1.000;1.000;0.990;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.8.3.2
InterPro :
IPR012336 : Thioredoxin-like fold
IPR013766 : Thioredoxin domain
IPR017905 : ERV/ALR sulfhydryl oxidase domain
GO :
0016972 : Molecular Function : thiol oxidase activity
0045454 : Biological Process : cell redox homeostasis
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
golg 13, extr 7, lyso 7, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000078392
(
AF361868
)
(Sulfhydryl oxidase 1 isoform b precursor.)
genome : 180,124,032 - 180,167,168 (43,137)
query : 15 - 2,532 (2,518/2,602)
13 exons
identity = 0.995
5'(1.000;1.000;0.978;0.990;0.989;1.000;1.000;
1.000;1.000;0.986;0.994;0.991;0.994)3'
coverage = 0.994
EC number :
EC 1.8.3.2
InterPro :
IPR012336 : Thioredoxin-like fold
IPR013766 : Thioredoxin domain
IPR017905 : ERV/ALR sulfhydryl oxidase domain
GO :
0016972 : Molecular Function : thiol oxidase activity
0045454 : Biological Process : cell redox homeostasis
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, lyso 12, E.R. 2, pero 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000423639
(
AK290842
)
(Sulfhydryl oxidase 1 isoform b precursor.)
genome : 180,124,019 - 180,166,711 (42,693)
query : 1 - 2,074 (2,074/2,074)
13 exons
identity = 0.993
5'(1.000;0.990;1.000;1.000;1.000;1.000;0.985;
1.000;0.992;1.000;0.994;0.988;0.980)3'
coverage = 1.000
EC number :
EC 1.8.3.2
InterPro :
IPR012336 : Thioredoxin-like fold
IPR013766 : Thioredoxin domain
IPR017905 : ERV/ALR sulfhydryl oxidase domain
GO :
0016972 : Molecular Function : thiol oxidase activity
0045454 : Biological Process : cell redox homeostasis
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, lyso 12, pero 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000336154
(
BC100023
)
(Sulfhydryl oxidase 1; hQSOX; EC=1.8.3.2; Quiescin Q6; Precursor;)
genome : 180,124,024 - 180,167,168 (43,145)
query : 1 - 3,259 (3,259/3,312)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;0.990;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 1.8.3.2
InterPro :
IPR012336 : Thioredoxin-like fold
IPR013766 : Thioredoxin domain
IPR017905 : ERV/ALR sulfhydryl oxidase domain
GO :
0016972 : Molecular Function : thiol oxidase activity
0045454 : Biological Process : cell redox homeostasis
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
golg 13, extr 7, lyso 7, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000329215
(
AB209280
)
(Sulfhydryl oxidase 1; hQSOX; EC=1.8.3.2; Quiescin Q6; Precursor;)
genome : 180,124,024 - 180,166,296 (42,273)
query : 1 - 2,387 (2,387/2,387)
12 exons
identity = 0.998
5'(1.000;1.000;0.978;0.990;0.989;1.000;1.000;
1.000;1.000;0.986;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.8.3.2
InterPro :
IPR012336 : Thioredoxin-like fold
IPR013766 : Thioredoxin domain
IPR017905 : ERV/ALR sulfhydryl oxidase domain
GO :
0016972 : Molecular Function : thiol oxidase activity
0045454 : Biological Process : cell redox homeostasis
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
golg 13, extr 7, lyso 7, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000038077
(
BC017692
)
(Sulfhydryl oxidase 1 isoform b precursor.)
genome : 180,124,029 - 180,167,168 (43,140)
query : 1 - 2,521 (2,521/2,559)
13 exons
identity = 0.995
5'(1.000;1.000;0.978;0.990;0.989;1.000;1.000;
1.000;1.000;0.986;1.000;0.991;0.993)3'
coverage = 1.000
EC number :
EC 1.8.3.2
InterPro :
IPR012336 : Thioredoxin-like fold
IPR013766 : Thioredoxin domain
IPR017905 : ERV/ALR sulfhydryl oxidase domain
GO :
0016972 : Molecular Function : thiol oxidase activity
0045454 : Biological Process : cell redox homeostasis
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, lyso 12, E.R. 2, pero 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000348880 (
ENST00000367600
)
(Sulfhydryl oxidase 1 isoform b precursor.)
genome : 180,124,032 - 180,167,169 (43,138)
query : 1 - 2,519 (2,519/2,519)
13 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.991;0.994)3'
coverage = 1.000
EC number :
EC 1.8.3.2
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, lyso 9, pero 3, cyto_mito 2.5, mito 2,
E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000193810
(
L42379
)
(Sulfhydryl oxidase 1 isoform b precursor.)
genome : 180,124,034 - 180,167,167 (43,134)
query : 1 - 3,228 (3,228/3,228)
12 exons
identity = 0.978
5'(0.985;0.990;1.000;0.990;1.000;0.973;1.000;
0.985;0.976;0.967;0.967;0.975)3'
coverage = 1.000
EC number :
EC 1.8.3.2
InterPro :
IPR012336 : Thioredoxin-like fold
IPR013766 : Thioredoxin domain
IPR017905 : ERV/ALR sulfhydryl oxidase domain
GO :
0016972 : Molecular Function : thiol oxidase activity
0045454 : Biological Process : cell redox homeostasis
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, lyso 10, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0029148
HIT000252535
(
AY358491
)
Representative transcript
(Hypothetical protein.)
genome : 180,138,712 - 180,139,938 (1,227)
query : 1 - 1,227 (1,227/1,227)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029148)
HIX0001385
HIT000453933
(
DQ587402
)
(Non-protein coding transcript.)
genome : 180,147,944 - 180,147,973 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000017044
(
AK092177
)
(Hypothetical protein.)
genome : 180,150,090 - 180,167,167 (17,078)
query : 1 - 2,343 (2,343/2,343)
2 exons
identity = 0.996
5'(0.998;0.990)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 7, cyto_nucl 5.83333, mito 5,
cyto_pero 4.33333, mito_nucl 4.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000456009
(
DQ589478
)
(Non-protein coding transcript.)
genome : 180,159,649 - 180,159,678 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0029388
HIT000262559
(
BC067355
)
Representative transcript
(Conserved hypothetical protein.)
genome : 180,160,119 - 180,161,350 (1,232)
query : 1 - 1,232 (1,232/1,249)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 13.5, nucl 11.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029388)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000000541
Pan
sp. (Chimpanzee) : XM_001158727
HIX0001385
HIT000540993 (
ENST00000443059
)
(Sulfhydryl oxidase 1; hQSOX; EC=1.8.3.2; Quiescin Q6; Precursor;)
genome : 180,165,817 - 180,167,151 (1,335)
query : 1 - 893 (893/893)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.8.3.2
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11, cyto_nucl 8.5, extr_plas 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000015227
(
AK074447
)
(Conserved hypothetical protein.)
genome : 180,167,146 - 180,169,430 (2,285)
query : 23 - 2,307 (2,285/2,359)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.990
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 9, cyto 5, mito_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000563078 (
NR_026900
)
(Conserved hypothetical protein.)
genome : 180,167,144 - 180,169,860 (2,717)
query : 1 - 2,717 (2,717/2,717)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 9, cyto 5, mito_nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000027839
(
AL832927
)
(Conserved hypothetical protein.)
genome : 180,167,144 - 180,169,430 (2,287)
query : 1 - 2,288 (2,288/2,323)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 9, cyto 5, mito_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001385
HIT000451417
(
DQ584886
)
(Non-protein coding transcript.)
genome : 180,167,455 - 180,167,485 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001385)
HIX0001386
HIT000109009 (
ENST00000263726
)
(LIM/homeobox protein Lhx4; LIM homeobox protein 4;)
genome : 180,199,421 - 180,249,380 (49,960)
query : 1 - 7,083 (7,083/7,083)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001386)
HIX0001386
HIT000072776
(
AF179849
)
Representative transcript
(LIM/homeobox protein Lhx4; LIM homeobox protein 4;)
genome : 180,199,442 - 180,244,101 (44,660)
query : 14 - 1,796 (1,783/1,810)
6 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.985
InterPro :
IPR001781 : Zinc finger, LIM-type
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001386)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC049834
Danio
sp. (Zebrafish) : BC129374
Macaca
sp. (Macaque) : ENSMMUT00000016876
Oryzias
sp. (Medaka) : ENSORLT00000021712
Pongo
sp. (Orangutan) : ENSPPYT00000000538
Rattus
sp. (Rat) : ENSRNOT00000050876
Tetraodon
sp. (Tetraodon) : GSTENT00028850001
Takifugu
sp. (Fugu) : SINFRUT00000164183
Gallus
sp. (Chicken) : XM_001235591
Monodelphis
sp. (Opossum) : XM_001374486
Equus
sp. (Horse) : XM_001914825
Pan
sp. (Chimpanzee) : XM_524984
Canis
sp. (Dog) : XM_547420
HIX0001386
HIT000211301 (
NM_033343
)
(LIM/homeobox protein Lhx4; LIM homeobox protein 4;)
genome : 180,199,433 - 180,244,188 (44,756)
query : 1 - 1,879 (1,879/1,909)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001386)
HIX0001386
HIT000671427 (
ENST00000558139
)
(LIM/homeobox protein Lhx4; LIM homeobox protein 4;)
genome : 180,199,433 - 180,217,832 (18,400)
query : 1 - 721 (721/721)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001386)
HIX0001386
HIT000035431
(
BC011759
)
(LIM/homeobox protein Lhx4; LIM homeobox protein 4;)
genome : 180,199,622 - 180,244,188 (44,567)
query : 1 - 1,690 (1,690/1,733)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001781 : Zinc finger, LIM-type
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001386)
HIX0001386
HIT000083906
(
AY053457
)
(LIM/homeobox protein Lhx4; LIM homeobox protein 4;)
genome : 180,199,641 - 180,243,777 (44,137)
query : 1 - 1,260 (1,260/1,260)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR001781 : Zinc finger, LIM-type
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001386)
HIX0001386
HIT000059727
(
AB055703
)
(LIM/homeobox protein Lhx4; LIM homeobox protein 4;)
genome : 180,217,420 - 180,244,088 (26,669)
query : 12 - 1,482 (1,471/1,482)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.993
InterPro :
IPR001781 : Zinc finger, LIM-type
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001386)
HIX0001386
HIT000059728
(
AB055704
)
(Conserved hypothetical protein.)
genome : 180,217,420 - 180,241,029 (23,610)
query : 12 - 614 (603/614)
4 exons
identity = 0.998
5'(1.000;1.000;0.994;1.000)3'
coverage = 0.982
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 13.5, nucl 11.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001386)
HIX0001386
HIT000076158
(
AF282899
)
(LIM/homeobox protein Lhx4; LIM homeobox protein 4;)
genome : 180,217,420 - 180,243,714 (26,295)
query : 8 - 1,104 (1,097/1,104)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.994
InterPro :
IPR001781 : Zinc finger, LIM-type
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001386)
HIX0001386
HIT000674343 (
ENST00000561113
)
(Conserved hypothetical protein.)
genome : 180,217,420 - 180,241,029 (23,610)
query : 1 - 603 (603/603)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, extr 8, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001386)
HIX0001389
HIT000659932 (
NR_037642
)
(Conserved hypothetical protein.)
genome : 180,238,799 - 180,243,816 (5,018)
query : 1 - 2,656 (2,656/2,673)
5 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.886)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9, plas 7, pero 7, mito 4, extr_plas 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001389)
HIX0001389
HIT000513348 (
ENST00000415414
)
(Conserved hypothetical protein.)
genome : 180,238,788 - 180,243,816 (5,029)
query : 1 - 2,667 (2,667/2,667)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.886)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9, plas 7, pero 7, mito 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001389)
HIX0001389
HIT000021105
(
AK096250
)
(LIM/homeobox protein Lhx4; LIM homeobox protein 4;)
genome : 180,238,800 - 180,243,816 (5,017)
query : 1 - 2,655 (2,655/2,655)
5 exons
identity = 0.997
3'(0.998;1.000;1.000;1.000;0.886)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9, plas 7, pero 7, mito 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001389)
HIX0001386
HIT000059195
(
AB037683
)
(LIM/homeobox protein Lhx4; LIM homeobox protein 4;)
genome : 180,240,514 - 180,244,088 (3,575)
query : 1 - 1,097 (1,097/1,097)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001386)
HIX0001389
HIT000334477
(
BC092502
)
(Conserved hypothetical protein.)
genome : 180,241,738 - 180,245,359 (3,622)
query : 1 - 2,547 (2,547/2,562)
3 exons
identity = 0.997
3'(0.999;1.000;0.996)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001389)
HIX0001389
HIT000538893 (
ENST00000440959
)
(Conserved hypothetical protein.)
genome : 180,241,737 - 180,245,359 (3,623)
query : 1 - 2,547 (2,547/2,547)
3 exons
identity = 0.998
3'(1.000;1.000;0.997)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, mito 11, cyto_nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001389)
HIX0001389
HIT000600289 (
ENST00000496993
)
(Ankyrin repeat-containing domain containing protein.)
genome : 180,244,515 - 180,399,397 (154,883)
query : 1 - 672 (672/672)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 12, cyto_nucl 9.33333,
cyto_plas 8.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001389)
HIX0001386
HIT000009696
(
AK026422
)
(Hypothetical short protein.)
genome : 180,245,085 - 180,247,957 (2,873)
query : 1 - 2,486 (2,486/2,502)
2 exons
identity = 0.992
5'(0.991;0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 10.5, cyto 7.5, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001386)
HIX0001389
HIT000579585 (
ENST00000475338
)
(Ankyrin repeat-containing domain containing protein.)
genome : 180,256,118 - 180,382,523 (126,406)
query : 1 - 964 (964/964)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001389)
HIX0001389
HIT000032884
(
BC006505
)
Representative transcript
(Acyl-CoA-binding domain-containing protein 6;)
genome : 180,257,365 - 180,471,479 (214,115)
query : 1 - 1,060 (1,060/1,089)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000582 : Acyl-CoA-binding protein, ACBP
IPR002110 : Ankyrin repeat
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR020683 : Ankyrin repeat-containing domain
GO :
0000062 : Molecular Function : fatty-acyl-CoA binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, nucl 7.5, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001389)
HIX0001389
HIT000255733
(
AY606133
)
(Acyl-CoA-binding domain-containing protein 6.)
genome : 180,257,372 - 180,471,435 (214,064)
query : 1 - 1,051 (1,051/1,083)
8 exons
identity = 0.967
3'(1.000;0.707;0.947;0.897;1.000;0.990;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000582 : Acyl-CoA-binding protein, ACBP
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
GO :
0000062 : Molecular Function : fatty-acyl-CoA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.5, nucl 11.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001389)
HIX0001389
HIT000210590 (
NM_032360
)
(Acyl-CoA-binding protein, ACBP domain containing protein.)
genome : 180,257,352 - 180,472,022 (214,671)
query : 1 - 1,616 (1,616/1,617)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, nucl 7.5, mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001389)
HIX0001389
HIT000348875 (
ENST00000367595
)
(Acyl-CoA-binding protein, ACBP domain containing protein.)
genome : 180,257,365 - 180,472,089 (214,725)
query : 1 - 1,670 (1,670/1,670)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, nucl 7.5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001389)
HIX0001389
HIT000432978
(
AK314112
)
(Acyl-CoA-binding domain-containing protein 6;)
genome : 180,257,498 - 180,471,997 (214,500)
query : 1 - 1,445 (1,445/1,445)
8 exons
identity = 0.998
3'(1.000;1.000;0.989;1.000;1.000;1.000;1.000;
0.998)5'
coverage = 1.000
InterPro :
IPR000582 : Acyl-CoA-binding protein, ACBP
IPR002110 : Ankyrin repeat
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR020683 : Ankyrin repeat-containing domain
GO :
0000062 : Molecular Function : fatty-acyl-CoA binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 14.5, nucl 8.5, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001389)
HIX0161334
HIT000548131 (
ENST00000450197
)
(Eukaryotic porin/Tom40 family protein.)
genome : 180,403,935 - 180,405,071 (1,137)
query : 1 - 835 (835/835)
2 exons
identity = 0.990
5'(1.000;0.980)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 15, nucl 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161334)
HIX0203893
HIT000659333 (
NR_036067
)
(Non-protein coding transcript.)
genome : 180,407,449 - 180,407,525 (77)
query : 1 - 77 (77/77)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203893)
HIX0203893
HIT000691604 (
ENST00000579680
)
(Non-protein coding transcript.)
genome : 180,407,449 - 180,407,525 (77)
query : 1 - 77 (77/77)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203893)
HIX0028749
HIT000265116
(
BC073892
)
(Conserved hypothetical protein.)
genome : 180,528,110 - 180,535,653 (7,544)
query : 25 - 1,514 (1,490/1,529)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 0.983
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028749)
HIX0028749
HIT000261078
(
BC063624
)
(Hypothetical protein.)
genome : 180,528,110 - 180,535,654 (7,545)
query : 1 - 1,491 (1,491/1,506)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028749)
HIX0028749
HIT000097850
(
BC044260
)
Representative transcript
(Conserved hypothetical protein.)
genome : 180,528,112 - 180,535,653 (7,542)
query : 1 - 1,488 (1,488/1,604)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028749)
HIX0028749
HIT000540555 (
ENST00000442621
)
(Hypothetical protein.)
genome : 180,528,112 - 180,535,654 (7,543)
query : 1 - 1,489 (1,489/1,489)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028749)
HIX0028749
HIT000094639
(
BC036830
)
(Hypothetical protein.)
genome : 180,528,124 - 180,535,654 (7,531)
query : 12 - 1,488 (1,477/1,502)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028749)
HIX0028749
HIT000338685
(
BC107121
)
(Conserved hypothetical protein.)
genome : 180,531,354 - 180,535,416 (4,063)
query : 1 - 1,157 (1,157/1,157)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028749)
HIX0028749
HIT000338686
(
BC107122
)
(Conserved hypothetical protein.)
genome : 180,531,354 - 180,535,416 (4,063)
query : 1 - 1,157 (1,157/1,157)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028749)
HIX0001390
HIT000091611
(
BC028576
)
(Xenotropic and polytropic retrovirus receptor 1 isoform 1.)
genome : 180,601,140 - 180,855,486 (254,347)
query : 2 - 4,571 (4,570/4,607)
15 exons
identity = 0.998
5'(0.996;1.000;1.000;0.996;1.000;0.976;1.000;
1.000;1.000;1.000;1.000;1.000;0.993;1.000;
0.997)3'
coverage = 1.000
InterPro :
IPR004331 : SPX, N-terminal
IPR004342 : EXS, C-terminal
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0001390
HIT000348870 (
ENST00000367590
)
(Xenotropic and polytropic retrovirus receptor 1; Protein SYG1 homolog; Xenotropic and polytropic murine leukemia virus receptor X3; X-receptor;)
genome : 180,601,140 - 180,859,387 (258,248)
query : 1 - 8,474 (8,474/8,474)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0001390
HIT000201473 (
NM_004736
)
(Xenotropic and polytropic retrovirus receptor 1; Protein SYG1 homolog; Xenotropic and polytropic murine leukemia virus receptor X3; X-receptor;)
genome : 180,601,146 - 180,859,415 (258,270)
query : 1 - 8,496 (8,496/8,500)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0001390
HIT000560149 (
NM_001135669
)
(Xenotropic and polytropic retrovirus receptor 1; Protein SYG1 homolog; Xenotropic and polytropic murine leukemia virus receptor X3; X-receptor;)
genome : 180,601,146 - 180,859,415 (258,270)
query : 1 - 8,301 (8,301/8,305)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0001390
HIT000428616
(
AK309750
)
(Xenotropic and polytropic retrovirus receptor 1 isoform 1.)
genome : 180,601,158 - 180,805,872 (204,715)
query : 1 - 1,701 (1,701/1,701)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004331 : SPX, N-terminal
IPR004342 : EXS, C-terminal
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0001390
HIT000052521
(
BC041142
)
(Xenotropic and polytropic retrovirus receptor 1; Protein SYG1 homolog; Xenotropic and polytropic murine leukemia virus receptor X3; X-receptor;)
genome : 180,601,168 - 180,855,261 (254,094)
query : 1 - 4,125 (4,125/4,154)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004331 : SPX, N-terminal
IPR004342 : EXS, C-terminal
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0001390
HIT000348869 (
ENST00000367589
)
(Xenotropic and polytropic retrovirus receptor 1; Protein SYG1 homolog; Xenotropic and polytropic murine leukemia virus receptor X3; X-receptor;)
genome : 180,601,168 - 180,855,262 (254,095)
query : 1 - 4,126 (4,126/4,126)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0001390
HIT000068574
(
AF099082
)
(Xenotropic and polytropic retrovirus receptor 1; Protein SYG1 homolog; Xenotropic and polytropic murine leukemia virus receptor X3; X-receptor;)
genome : 180,601,174 - 180,853,903 (252,730)
query : 6 - 2,961 (2,956/2,970)
15 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.990;1.000;1.000;1.000;
0.996)3'
coverage = 0.998
InterPro :
IPR004331 : SPX, N-terminal
IPR004342 : EXS, C-terminal
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0001390
HIT000068160
(
AF089744
)
Representative transcript
(Xenotropic and polytropic retrovirus receptor 1; Protein SYG1 homolog; Xenotropic and polytropic murine leukemia virus receptor X3; X-receptor;)
genome : 180,601,173 - 180,855,480 (254,308)
query : 1 - 4,532 (4,532/4,546)
15 exons
identity = 0.998
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
0.997)3'
coverage = 1.000
InterPro :
IPR004331 : SPX, N-terminal
IPR004342 : EXS, C-terminal
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK147403
Pongo
sp. (Orangutan) : CR858618
Oryzias
sp. (Medaka) : ENSORLT00000009734
Oryzias
sp. (Medaka) : ENSORLT00000021740
Rattus
sp. (Rat) : ENSRNOT00000000049
Tetraodon
sp. (Tetraodon) : GSTENT00028856001
Danio
sp. (Zebrafish) : NM_001126390
Takifugu
sp. (Fugu) : SINFRUT00000154008
Takifugu
sp. (Fugu) : SINFRUT00000164180
Macaca
sp. (Macaque) : XM_001115004
Monodelphis
sp. (Opossum) : XM_001374564
Equus
sp. (Horse) : XM_001488444
Gallus
sp. (Chicken) : XM_422258
Pan
sp. (Chimpanzee) : XM_524986
Canis
sp. (Dog) : XM_547421
Bos
sp. (Cow) : XM_616684
Danio
sp. (Zebrafish) : XM_685744
HIX0001390
HIT000069897
(
AF115389
)
(Xenotropic and polytropic retrovirus receptor 1; Protein SYG1 homolog; Xenotropic and polytropic murine leukemia virus receptor X3; X-receptor;)
genome : 180,601,338 - 180,853,271 (251,934)
query : 1 - 2,160 (2,160/2,160)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR004331 : SPX, N-terminal
IPR004342 : EXS, C-terminal
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0001390
HIT000024960
(
AL133058
)
(Xenotropic and polytropic retrovirus receptor 1 isoform 1.)
genome : 180,772,607 - 180,853,812 (81,206)
query : 1 - 2,395 (2,395/2,411)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004331 : SPX, N-terminal
IPR004342 : EXS, C-terminal
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0001390
HIT000025871
(
AL137583
)
(Xenotropic and polytropic retrovirus receptor 1 isoform 1.)
genome : 180,793,961 - 180,854,581 (60,621)
query : 1 - 2,635 (2,635/2,656)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR004342 : EXS, C-terminal
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0001390
HIT000081824
(
AK074789
)
(Xenotropic and polytropic retrovirus receptor 1 isoform 1.)
genome : 180,805,773 - 180,855,257 (49,485)
query : 1 - 2,723 (2,723/2,723)
5 exons
identity = 0.997
5'(1.000;1.000;1.000;0.995;0.997)3'
coverage = 1.000
InterPro :
IPR004342 : EXS, C-terminal
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, pero 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0001390
HIT000601411 (
ENST00000498177
)
(Xenotropic and polytropic retrovirus receptor 1 isoform 1.)
genome : 180,805,788 - 180,843,191 (37,404)
query : 1 - 485 (485/485)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, pero 6, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0001390
HIT000569541 (
ENST00000464817
)
(Xenotropic and polytropic retrovirus receptor 1 isoform 2.)
genome : 180,832,900 - 180,847,426 (14,527)
query : 1 - 567 (567/567)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11, extr 9, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0001390
HIT000012920
(
AK056306
)
(Conserved hypothetical protein.)
genome : 180,855,707 - 180,879,762 (24,056)
query : 1 - 2,140 (2,140/2,140)
2 exons
identity = 0.985
5'(0.999;0.888)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0001390
HIT000571960 (
ENST00000467345
)
(Hypothetical short protein.)
genome : 180,856,708 - 180,857,584 (877)
query : 1 - 736 (736/736)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, pero 7, cyto 4, nucl 2, mito 2, cyto_golg 2,
mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0056899
HIT000328557
(
AB075495
)
Representative transcript
(Hypothetical protein.)
genome : 180,857,290 - 180,859,385 (2,096)
query : 4 - 2,099 (2,096/2,099)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto_nucl 7.5, cyto 7, nucl 4, plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056899)
HIX0001390
HIT000221503
(
U79279
)
(Hypothetical short protein.)
genome : 180,857,958 - 180,858,916 (959)
query : 1 - 959 (959/982)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 4, mito 2, cyto_pero 2, cyto_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001390)
HIX0200104
HIT000532381 (
ENST00000434447
)
(Hypothetical short protein.)
genome : 180,875,787 - 180,878,302 (2,516)
query : 1 - 543 (543/543)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 3, mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200104)
HIX0200104
HIT000520792 (
ENST00000422858
)
(Hypothetical short protein.)
genome : 180,876,937 - 180,878,078 (1,142)
query : 1 - 444 (444/444)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200104)
HIX0001392
HIT000599541 (
ENST00000496210
)
(Hypothetical short protein.)
genome : 180,882,290 - 180,883,192 (903)
query : 1 - 363 (363/363)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 9.5, cyto_nucl 7, extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001392)
HIX0001392
HIT000486246 (
NM_020950
)
(Uncharacterized protein KIAA1614;)
genome : 180,882,313 - 180,915,239 (32,927)
query : 1 - 4,155 (4,155/4,155)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 18, cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001392)
HIX0001392
HIT000348868 (
ENST00000367588
)
(Uncharacterized protein KIAA1614;)
genome : 180,882,325 - 180,920,750 (38,426)
query : 1 - 9,654 (9,654/9,654)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 18, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001392)
HIX0001392
HIT000001329
(
AB046834
)
Representative transcript
(Uncharacterized protein KIAA1614;)
genome : 180,882,325 - 180,915,239 (32,915)
query : 1 - 4,143 (4,143/4,143)
9 exons
identity = 0.999
5'(1.000;0.999;1.000;1.000;0.999;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 18, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001392)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK129406
Canis
sp. (Dog) : ENSCAFT00000020339
Pongo
sp. (Orangutan) : ENSPPYT00000000533
Pan
sp. (Chimpanzee) : ENSPTRT00000003163
Rattus
sp. (Rat) : ENSRNOT00000004704
Takifugu
sp. (Fugu) : SINFRUT00000154654
Macaca
sp. (Macaque) : XM_001111115
Bos
sp. (Cow) : XM_001253256
Monodelphis
sp. (Opossum) : XM_001374628
Equus
sp. (Horse) : XM_001488875
Gallus
sp. (Chicken) : XM_422257
Danio
sp. (Zebrafish) : XM_690127
HIX0001392
HIT000015535
(
AK090668
)
(Uncharacterized protein KIAA1614;)
genome : 180,897,283 - 180,915,238 (17,956)
query : 1 - 3,309 (3,309/3,310)
6 exons
identity = 0.998
5'(1.000;0.998;1.000;1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13, mito 8, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001392)
HIX0001392
HIT000348867 (
ENST00000367587
)
(Uncharacterized protein KIAA1614;)
genome : 180,897,283 - 180,915,238 (17,956)
query : 1 - 3,309 (3,309/3,309)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13, mito 8, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001392)
HIX0001392
HIT000587580 (
ENST00000483705
)
(Uncharacterized protein KIAA1614;)
genome : 180,897,591 - 180,913,652 (16,062)
query : 1 - 645 (645/645)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 11, mito 10.5, cyto_nucl 10, cyto 9.5,
cyto_pero 6.66667, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001392)
HIX0001392
HIT000566235 (
ENST00000461346
)
(Uncharacterized protein KIAA1614;)
genome : 180,910,329 - 180,920,061 (9,733)
query : 1 - 992 (992/992)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001392)
HIX0001392
HIT000013271
(
AK056657
)
(Conserved hypothetical protein.)
genome : 180,913,175 - 180,945,618 (32,444)
query : 1 - 2,427 (2,427/2,427)
2 exons
identity = 0.998
5'(0.998;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001392)
HIX0001392
HIT000311828 (
ENST00000358073
)
(Conserved hypothetical protein.)
genome : 180,913,178 - 180,945,618 (32,441)
query : 1 - 2,424 (2,424/2,424)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001392)
HIX0001392
HIT000012353
(
AK055739
)
(Conserved hypothetical protein.)
genome : 180,914,570 - 180,917,599 (3,030)
query : 1 - 3,029 (3,029/3,029)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001392)
HIX0001394
HIT000009633
(
AK026359
)
Representative transcript
(Conserved hypothetical protein.)
genome : 180,918,835 - 180,924,023 (5,189)
query : 1 - 1,440 (1,440/1,458)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 6.5, cyto_nucl 5.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001394)
HIX0001394
HIT000513581 (
ENST00000415647
)
(Conserved hypothetical protein.)
genome : 180,918,835 - 180,924,023 (5,189)
query : 1 - 1,440 (1,440/1,440)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 6.5, cyto_nucl 5.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001394)
HIX0029225
HIT000092495
(
BC031957
)
Representative transcript
(Conserved hypothetical protein.)
genome : 180,922,149 - 180,923,254 (1,106)
query : 1 - 1,103 (1,103/1,129)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029225)
HIX0178341
HIT000603449 (
ENST00000503142
)
(MHC class I alpha chain family protein.)
genome : 180,933,647 - 180,935,045 (1,399)
query : 1 - 537 (537/537)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 11.5, nucl 8.5, extr 6, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178341)
HIX0001393
HIT000107267 (
ENST00000258301
)
(Syntaxin-6;)
genome : 180,941,861 - 180,992,047 (50,187)
query : 1 - 4,851 (4,851/4,851)
8 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.956;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 8.5, mito 6, pero 5, plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001393)
HIX0001393
HIT000063420
(
AF038202
)
(Hypothetical short protein.)
genome : 180,942,164 - 180,943,906 (1,743)
query : 1 - 1,743 (1,743/1,761)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 4, mito 2, cyto_plas 2, cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001393)
HIX0001393
HIT000202476 (
NM_005819
)
(Syntaxin-6;)
genome : 180,942,177 - 180,992,046 (49,870)
query : 1 - 4,534 (4,534/4,548)
8 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.956;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 8.5, mito 6, pero 5, plas 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001393)
HIX0001393
HIT000095527
(
BC039118
)
(Syntaxin-6.)
genome : 180,942,177 - 180,958,513 (16,337)
query : 1 - 4,840 (4,840/4,854)
3 exons
identity = 1.000
3'(0.999;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000727 : Target SNARE coiled-coil domain
IPR006012 : Syntaxin/epimorphin, conserved site
GO :
0005484 : Molecular Function : SNAP receptor activity
0005515 : Molecular Function : protein binding
0006886 : Biological Process : intracellular protein transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito_pero 9.16667, cyto_pero 9.16667, cyto 9, pero 9,
E.R._mito 7.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001393)
HIX0001393
HIT000573671 (
ENST00000469135
)
(Syntaxin-6.)
genome : 180,942,175 - 180,958,513 (16,339)
query : 1 - 4,842 (4,842/4,842)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito_pero 9.16667, cyto_pero 9.16667, cyto 9, pero 9,
E.R._mito 7.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001393)
HIX0001393
HIT000034687
(
BC009944
)
Representative transcript
(Syntaxin-6;)
genome : 180,945,103 - 180,991,980 (46,878)
query : 1 - 1,542 (1,542/1,561)
8 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.956;
1.000)5'
coverage = 1.000
InterPro :
IPR000727 : Target SNARE coiled-coil domain
IPR006012 : Syntaxin/epimorphin, conserved site
IPR010989 : t-SNARE
IPR015260 : Syntaxin 6, N-terminal
GO :
0005484 : Molecular Function : SNAP receptor activity
0005515 : Molecular Function : protein binding
0006886 : Biological Process : intracellular protein transport
0016020 : Cellular Component : membrane
0016192 : Biological Process : vesicle-mediated transport
0048193 : Biological Process : Golgi vesicle transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 8.5, mito 6, pero 5, plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001393)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ719915
Mus
sp. (Mouse) : AK019106
Rattus
sp. (Rat) : BC081769
Bos
sp. (Cow) : BC133525
Danio
sp. (Zebrafish) : BC158193
Pongo
sp. (Orangutan) : CR860434
Canis
sp. (Dog) : ENSCAFT00000020377
Oryzias
sp. (Medaka) : ENSORLT00000000116
Monodelphis
sp. (Opossum) : XM_001374711
Equus
sp. (Horse) : XM_001488916
Danio
sp. (Zebrafish) : XM_001922219
Pan
sp. (Chimpanzee) : XM_514037
HIX0001393
HIT000493687
(
AK299063
)
(Syntaxin-6.)
genome : 180,945,426 - 180,992,005 (46,580)
query : 1 - 979 (979/979)
6 exons
identity = 0.998
3'(0.997;0.989;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000727 : Target SNARE coiled-coil domain
IPR006012 : Syntaxin/epimorphin, conserved site
GO :
0005484 : Molecular Function : SNAP receptor activity
0005515 : Molecular Function : protein binding
0006886 : Biological Process : intracellular protein transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 7, cyto 6.5, mito_pero 6.5, pero 6,
cyto_nucl 5.5, plas 5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001393)
HIX0001393
HIT000641105 (
ENST00000542060
)
(Syntaxin-6.)
genome : 180,945,426 - 180,992,005 (46,580)
query : 1 - 979 (979/979)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 7, cyto 6.5, mito_pero 6.5, pero 6,
cyto_nucl 5.5, plas 5, E.R._mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001393)
HIX0001393
HIT000431306
(
AK312440
)
(Syntaxin-6;)
genome : 180,945,706 - 180,992,043 (46,338)
query : 1 - 1,003 (1,003/1,003)
8 exons
identity = 0.990
3'(1.000;0.989;1.000;1.000;1.000;1.000;0.956;
0.996)5'
coverage = 1.000
InterPro :
IPR000727 : Target SNARE coiled-coil domain
IPR006012 : Syntaxin/epimorphin, conserved site
IPR010989 : t-SNARE
IPR015260 : Syntaxin 6, N-terminal
GO :
0005484 : Molecular Function : SNAP receptor activity
0005515 : Molecular Function : protein binding
0006886 : Biological Process : intracellular protein transport
0016020 : Cellular Component : membrane
0016192 : Biological Process : vesicle-mediated transport
0048193 : Biological Process : Golgi vesicle transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 8.5, mito 6, pero 5, plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001393)
HIX0001393
HIT000243938
(
AJ002078
)
(Syntaxin-6;)
genome : 180,945,706 - 180,991,809 (46,104)
query : 1 - 768 (768/768)
8 exons
identity = 0.988
3'(0.987;1.000;1.000;1.000;1.000;1.000;0.956;
1.000)5'
coverage = 1.000
InterPro :
IPR000727 : Target SNARE coiled-coil domain
IPR006012 : Syntaxin/epimorphin, conserved site
IPR010989 : t-SNARE
IPR015260 : Syntaxin 6, N-terminal
GO :
0005484 : Molecular Function : SNAP receptor activity
0005515 : Molecular Function : protein binding
0006886 : Biological Process : intracellular protein transport
0016020 : Cellular Component : membrane
0016192 : Biological Process : vesicle-mediated transport
0048193 : Biological Process : Golgi vesicle transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 8.5, mito 6, pero 5, plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001393)
HIX0001393
HIT000268726
(
CR541856
)
(Syntaxin-6;)
genome : 180,945,706 - 180,991,809 (46,104)
query : 1 - 768 (768/768)
8 exons
identity = 0.987
3'(0.987;0.989;1.000;1.000;1.000;1.000;0.956;
1.000)5'
coverage = 1.000
InterPro :
IPR000727 : Target SNARE coiled-coil domain
IPR006012 : Syntaxin/epimorphin, conserved site
IPR010989 : t-SNARE
IPR015260 : Syntaxin 6, N-terminal
GO :
0005484 : Molecular Function : SNAP receptor activity
0005515 : Molecular Function : protein binding
0006886 : Biological Process : intracellular protein transport
0016020 : Cellular Component : membrane
0016192 : Biological Process : vesicle-mediated transport
0048193 : Biological Process : Golgi vesicle transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 8.5, mito 6, pero 5, plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001393)
HIX0001393
HIT000268743
(
CR541873
)
(Syntaxin-6;)
genome : 180,945,709 - 180,991,809 (46,101)
query : 1 - 765 (765/765)
8 exons
identity = 0.986
3'(0.986;0.989;1.000;1.000;1.000;0.988;0.956;
1.000)5'
coverage = 1.000
InterPro :
IPR000727 : Target SNARE coiled-coil domain
IPR006012 : Syntaxin/epimorphin, conserved site
IPR010989 : t-SNARE
IPR015260 : Syntaxin 6, N-terminal
GO :
0005484 : Molecular Function : SNAP receptor activity
0005515 : Molecular Function : protein binding
0006886 : Biological Process : intracellular protein transport
0016020 : Cellular Component : membrane
0016192 : Biological Process : vesicle-mediated transport
0048193 : Biological Process : Golgi vesicle transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 8.5, mito 6, pero 5, plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001393)
HIX0001393
HIT000599792 (
ENST00000496476
)
(Syntaxin-6.)
genome : 180,956,861 - 180,957,437 (577)
query : 1 - 434 (434/434)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 7.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001393)
HIX0001395
HIT000198503 (
NM_001531
)
(Major histocompatibility complex class I-related gene protein; MHC class I-related gene protein; Class I histocompatibility antigen-like protein; Precursor;)
genome : 181,002,561 - 181,031,074 (28,514)
query : 1 - 7,860 (7,860/7,860)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 23, plas 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001395)
HIX0001395
HIT000655941 (
NM_001194999
)
(Major histocompatibility complex class I-related gene protein; MHC class I-related gene protein; Class I histocompatibility antigen-like protein; Precursor;)
genome : 181,002,561 - 181,031,074 (28,514)
query : 1 - 7,725 (7,725/7,725)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 22, plas 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001395)
HIX0001395
HIT000655942 (
NM_001195000
)
(Major histocompatibility complex class I-related gene protein isoform 3 precursor.)
genome : 181,002,561 - 181,031,074 (28,514)
query : 1 - 7,584 (7,584/7,584)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 23, plas 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001395)
HIX0001395
HIT000655953 (
NM_001195035
)
(Major histocompatibility complex class I-related gene protein isoform 4 precursor.)
genome : 181,002,561 - 181,031,074 (28,514)
query : 1 - 7,479 (7,479/7,479)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 15.5, E.R._mito 11.6667, extr 5, mito 4.5,
mito_pero 4.5, plas 2, pero 2, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001395)
HIX0001395
HIT000499269
(
AK304645
)
(Major histocompatibility complex class I-related gene protein isoform 4 precursor.)
genome : 181,003,067 - 181,024,725 (21,659)
query : 1 - 1,046 (1,046/1,046)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR001039 : MHC class I alpha chain, alpha1 alpha2 domains
IPR011161 : MHC class I-like antigen recognition
IPR027648 : MHC class I alpha chain
GO :
0001916 : Biological Process : positive regulation of T cell mediated cytotoxicity
0002474 : Biological Process : antigen processing and presentation of peptide antigen via MHC class I
0006955 : Biological Process : immune response
0016020 : Cellular Component : membrane
0019882 : Biological Process : antigen processing and presentation
0042605 : Molecular Function : peptide antigen binding
0042612 : Cellular Component : MHC class I protein complex
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 15.5, E.R._mito 11.6667, extr 5, mito 4.5,
mito_pero 4.5, plas 2, pero 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001395)
HIX0001395
HIT000532505 (
ENST00000434571
)
(Major histocompatibility complex class I-related gene protein isoform 4 precursor.)
genome : 181,003,067 - 181,024,725 (21,659)
query : 1 - 1,046 (1,046/1,046)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 15.5, E.R._mito 11.6667, extr 5, mito 4.5,
mito_pero 4.5, plas 2, pero 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001395)
HIX0001395
HIT000590205 (
ENST00000486453
)
(Major histocompatibility complex class I-related gene protein isoform 2 precursor.)
genome : 181,003,108 - 181,018,833 (15,726)
query : 1 - 749 (749/749)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, E.R. 8.5, E.R._mito 7.16667, mito_pero 3.5,
plas 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001395)
HIX0001395
HIT000423171
(
AK290374
)
(Major histocompatibility complex class I-related gene protein isoform 3 precursor.)
genome : 181,003,119 - 181,024,700 (21,582)
query : 1 - 1,074 (1,074/1,074)
5 exons
identity = 0.999
5'(1.000;1.000;0.996;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001039 : MHC class I alpha chain, alpha1 alpha2 domains
IPR011161 : MHC class I-like antigen recognition
IPR027648 : MHC class I alpha chain
GO :
0001916 : Biological Process : positive regulation of T cell mediated cytotoxicity
0002474 : Biological Process : antigen processing and presentation of peptide antigen via MHC class I
0006955 : Biological Process : immune response
0016020 : Cellular Component : membrane
0019882 : Biological Process : antigen processing and presentation
0042605 : Molecular Function : peptide antigen binding
0042612 : Cellular Component : MHC class I protein complex
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 23, plas 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001395)
HIX0001395
HIT000330690
(
AK222910
)
(Major histocompatibility complex class I-related gene protein; MHC class I-related gene protein; Class I histocompatibility antigen-like protein; Precursor;)
genome : 181,003,130 - 181,024,479 (21,350)
query : 1 - 1,118 (1,118/1,118)
6 exons
identity = 0.996
5'(1.000;0.992;0.996;1.000;0.990;1.000)3'
coverage = 1.000
InterPro :
IPR001039 : MHC class I alpha chain, alpha1 alpha2 domains
IPR011161 : MHC class I-like antigen recognition
IPR027648 : MHC class I alpha chain
GO :
0001916 : Biological Process : positive regulation of T cell mediated cytotoxicity
0002474 : Biological Process : antigen processing and presentation of peptide antigen via MHC class I
0006955 : Biological Process : immune response
0016020 : Cellular Component : membrane
0019882 : Biological Process : antigen processing and presentation
0042605 : Molecular Function : peptide antigen binding
0042612 : Cellular Component : MHC class I protein complex
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 22, plas 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001395)
HIX0001395
HIT000348860 (
ENST00000367580
)
(Major histocompatibility complex class I-related gene protein; MHC class I-related gene protein; Class I histocompatibility antigen-like protein; Precursor;)
genome : 181,003,139 - 181,031,074 (27,936)
query : 1 - 7,704 (7,704/7,704)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 23, plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001395)
HIX0001395
HIT000112305 (
ENST00000282990
)
(Major histocompatibility complex class I-related gene protein isoform 3 precursor.)
genome : 181,003,139 - 181,025,689 (22,551)
query : 1 - 2,043 (2,043/2,043)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 23, plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001395)
HIX0001395
HIT000035837
(
BC012485
)
(Major histocompatibility complex class I-related gene protein isoform 2 precursor.)
genome : 181,003,139 - 181,024,659 (21,521)
query : 1 - 1,154 (1,154/1,177)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001039 : MHC class I alpha chain, alpha1 alpha2 domains
IPR011161 : MHC class I-like antigen recognition
GO :
0006955 : Biological Process : immune response
0016020 : Cellular Component : membrane
0019882 : Biological Process : antigen processing and presentation
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 22, plas 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001395)
HIX0001395
HIT000348859 (
ENST00000367579
)
(Major histocompatibility complex class I-related gene protein isoform 2 precursor.)
genome : 181,003,139 - 181,024,659 (21,521)
query : 1 - 1,154 (1,154/1,154)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 22, plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001395)
HIX0001395
HIT000218695
(
U22963
)
Representative transcript
(Major histocompatibility complex class I-related gene protein; MHC class I-related gene protein; Class I histocompatibility antigen-like protein; Precursor;)
genome : 181,003,139 - 181,024,633 (21,495)
query : 1 - 1,263 (1,263/1,263)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001039 : MHC class I alpha chain, alpha1 alpha2 domains
IPR011161 : MHC class I-like antigen recognition
IPR027648 : MHC class I alpha chain
GO :
0001916 : Biological Process : positive regulation of T cell mediated cytotoxicity
0002474 : Biological Process : antigen processing and presentation of peptide antigen via MHC class I
0006955 : Biological Process : immune response
0016020 : Cellular Component : membrane
0019882 : Biological Process : antigen processing and presentation
0042605 : Molecular Function : peptide antigen binding
0042612 : Cellular Component : MHC class I protein complex
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 23, plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001395)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB170523
Mus
sp. (Mouse) : AF010453
Pongo
sp. (Orangutan) : AJ271828
Pan
sp. (Chimpanzee) : AJ275982
Gallus
sp. (Chicken) : BX935231
Oryzias
sp. (Medaka) : ENSORLT00000001202
Oryzias
sp. (Medaka) : ENSORLT00000008080
Tetraodon
sp. (Tetraodon) : GSTENT00006874001
Monodelphis
sp. (Opossum) : XM_001374759
Equus
sp. (Horse) : XM_001488936
Bos
sp. (Cow) : XM_582624
Rattus
sp. (Rat) : Y13972
HIX0001395
HIT000245949
(
AJ249778
)
(Major histocompatibility complex class I-related gene protein; MHC class I-related gene protein; Class I histocompatibility antigen-like protein; Precursor;)
genome : 181,003,139 - 181,024,436 (21,298)
query : 1 - 1,066 (1,066/1,066)
6 exons
identity = 0.998
5'(1.000;0.996;1.000;1.000;0.990;1.000)3'
coverage = 1.000
InterPro :
IPR001039 : MHC class I alpha chain, alpha1 alpha2 domains
IPR011161 : MHC class I-like antigen recognition
IPR027648 : MHC class I alpha chain
GO :
0001916 : Biological Process : positive regulation of T cell mediated cytotoxicity
0002474 : Biological Process : antigen processing and presentation of peptide antigen via MHC class I
0006955 : Biological Process : immune response
0016020 : Cellular Component : membrane
0019882 : Biological Process : antigen processing and presentation
0042605 : Molecular Function : peptide antigen binding
0042612 : Cellular Component : MHC class I protein complex
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 23, plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001395)
HIX0001395
HIT000062089
(
AF010446
)
(Major histocompatibility complex class I-related gene protein isoform 3 precursor.)
genome : 181,003,139 - 181,024,422 (21,284)
query : 1 - 776 (776/776)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001039 : MHC class I alpha chain, alpha1 alpha2 domains
IPR011161 : MHC class I-like antigen recognition
IPR027648 : MHC class I alpha chain
GO :
0001916 : Biological Process : positive regulation of T cell mediated cytotoxicity
0002474 : Biological Process : antigen processing and presentation of peptide antigen via MHC class I
0006955 : Biological Process : immune response
0016020 : Cellular Component : membrane
0019882 : Biological Process : antigen processing and presentation
0042605 : Molecular Function : peptide antigen binding
0042612 : Cellular Component : MHC class I protein complex
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 23, plas 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001395)
HIX0001395
HIT000536369 (
ENST00000438435
)
(Major histocompatibility complex class I-related gene protein; MHC class I-related gene protein; Class I histocompatibility antigen-like protein; Precursor;)
genome : 181,003,146 - 181,024,420 (21,275)
query : 1 - 883 (883/883)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 10.5, cyto 9, mito_pero 9, mito 4.5,
cyto_golg 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001395)
HIX0001395
HIT000063062
(
AF031469
)
(Major histocompatibility complex class I-related gene protein isoform 1 precursor.)
genome : 181,003,156 - 181,025,688 (22,533)
query : 1 - 2,031 (2,031/2,046)
5 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR001039 : MHC class I alpha chain, alpha1 alpha2 domains
IPR011161 : MHC class I-like antigen recognition
IPR027648 : MHC class I alpha chain
GO :
0001916 : Biological Process : positive regulation of T cell mediated cytotoxicity
0002474 : Biological Process : antigen processing and presentation of peptide antigen via MHC class I
0006955 : Biological Process : immune response
0016020 : Cellular Component : membrane
0019882 : Biological Process : antigen processing and presentation
0042605 : Molecular Function : peptide antigen binding
0042612 : Cellular Component : MHC class I protein complex
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 14, extr 12, plas 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001395)
HIX0001395
HIT000062090
(
AF010447
)
(Major histocompatibility complex class I-related gene protein isoform 4 precursor.)
genome : 181,003,158 - 181,020,398 (17,241)
query : 1 - 1,566 (1,566/1,578)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001039 : MHC class I alpha chain, alpha1 alpha2 domains
IPR011161 : MHC class I-like antigen recognition
IPR027648 : MHC class I alpha chain
GO :
0001916 : Biological Process : positive regulation of T cell mediated cytotoxicity
0002474 : Biological Process : antigen processing and presentation of peptide antigen via MHC class I
0006955 : Biological Process : immune response
0016020 : Cellular Component : membrane
0019882 : Biological Process : antigen processing and presentation
0042605 : Molecular Function : peptide antigen binding
0042612 : Cellular Component : MHC class I protein complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 6, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001395)
HIX0001395
HIT000348858 (
ENST00000367578
)
(Major histocompatibility complex class I-related gene protein isoform 4 precursor.)
genome : 181,003,158 - 181,020,398 (17,241)
query : 1 - 1,566 (1,566/1,577)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 6, nucl 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001395)
HIX0001395
HIT000012769
(
AK056155
)
(Conserved hypothetical protein.)
genome : 181,028,571 - 181,031,073 (2,503)
query : 1 - 2,500 (2,500/2,500)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 11.5, cyto 7.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001395)
HIX0001396
HIT000206222 (
NM_016545
)
(Immediate early response gene 5 protein;)
genome : 181,057,638 - 181,059,978 (2,341)
query : 1 - 2,341 (2,341/2,350)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 13, cyto 7.5, extr 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001396)
HIX0001396
HIT000348857 (
ENST00000367577
)
(Immediate early response gene 5 protein;)
genome : 181,057,638 - 181,059,977 (2,340)
query : 1 - 2,340 (2,340/2,340)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 13, cyto 7.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001396)
HIX0001396
HIT000245993
(
AJ251089
)
(Immediate early response gene 5 protein;)
genome : 181,057,850 - 181,059,157 (1,308)
query : 43 - 1,350 (1,308/1,350)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 0.994
InterPro :
IPR008653 : Immediate early response
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 13, cyto 7.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001396)
HIX0001396
HIT000495356
(
AK300732
)
Representative transcript
(Immediate early response gene 5 protein.)
genome : 181,057,836 - 181,059,324 (1,489)
query : 1 - 966 (966/966)
2 exons
identity = 0.991
5'(1.000;0.977)3'
coverage = 1.000
InterPro :
IPR008653 : Immediate early response
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.5, nucl 7, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001396)
HIX0001396
HIT000433696
(
AK314830
)
(Immediate early response gene 5 protein;)
genome : 181,057,838 - 181,059,022 (1,185)
query : 1 - 1,187 (1,187/1,187)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
InterPro :
IPR008653 : Immediate early response
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 13, cyto 7.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001396)
HIX0001396
HIT000029368
(
BC000128
)
(Immediate early response gene 5 protein;)
genome : 181,057,848 - 181,059,973 (2,126)
query : 1 - 2,126 (2,126/2,159)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR008653 : Immediate early response
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 13, cyto 7.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001396)
HIX0001396
HIT000075227
(
AF258581
)
(Immediate early response gene 5 protein;)
genome : 181,057,851 - 181,059,973 (2,123)
query : 1 - 2,124 (2,124/2,142)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR008653 : Immediate early response
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 13, cyto 7.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001396)
HIX0001396
HIT000338995
(
BC108253
)
(Immediate early response gene 5 protein;)
genome : 181,057,852 - 181,059,973 (2,122)
query : 1 - 2,122 (2,122/2,171)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR008653 : Immediate early response
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 13, cyto 7.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001396)
HIX0001396
HIT000072752
(
AF178984
)
(Immediate early response gene 5 protein;)
genome : 181,057,897 - 181,059,973 (2,077)
query : 1 - 2,077 (2,077/2,091)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR008653 : Immediate early response
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 13, cyto 7.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001396)
HIX0023656
HIT000019365
(
AK094510
)
Representative transcript
(Conserved hypothetical protein.)
genome : 181,060,245 - 181,062,035 (1,791)
query : 1 - 1,791 (1,791/1,791)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023656)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XR_021712
HIX0029292
HIT000095757
(
BC039493
)
Representative transcript
(Conserved hypothetical protein.)
genome : 181,143,620 - 181,151,341 (7,722)
query : 1 - 539 (539/553)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 10, nucl 5, cyto_pero 5, cyto_plas 5,
cyto_golg 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029292)
HIX0160890
HIT000532957 (
ENST00000435023
)
(Conserved hypothetical protein.)
genome : 181,143,620 - 181,151,344 (7,725)
query : 1 - 542 (542/542)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160890)
HIX0029292
HIT000536362 (
ENST00000438428
)
(Hypothetical protein.)
genome : 181,144,473 - 181,151,343 (6,871)
query : 1 - 541 (541/541)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029292)
HIX0161526
HIT000554705 (
ENST00000456771
)
(Hypothetical short protein.)
genome : 181,159,607 - 181,160,285 (679)
query : 1 - 532 (532/532)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 4, mito 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161526)
HIX0028604
HIT000078766
(
AF387616
)
Representative transcript
(Conserved hypothetical protein.)
genome : 181,205,524 - 181,207,740 (2,217)
query : 1 - 259 (259/259)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028604)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000006581
HIX0028604
HIT000122156 (
ENST00000319701
)
(Conserved hypothetical protein.)
genome : 181,205,524 - 181,207,740 (2,217)
query : 1 - 259 (259/259)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028604)
HIX0028604
HIT000726568 (
NR_046249
)
(Conserved hypothetical protein.)
genome : 181,205,524 - 181,207,740 (2,217)
query : 1 - 259 (259/259)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, nucl 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028604)
HIX0028943
HIT000623859 (
ENST00000524607
)
(Voltage-dependent R-type calcium channel subunit alpha-1E; Brain calcium channel II; BII; Calcium channel, L type, alpha-1 polypeptide, isoform 6; Voltage-gated calcium channel subunit alpha Cav2.3;)
genome : 181,382,238 - 181,685,265 (303,028)
query : 1 - 1,795 (1,795/1,795)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028943)
HIX0028943
HIT000078765
(
AF387615
)
(Conserved hypothetical protein.)
genome : 181,382,579 - 181,382,716 (138)
query : 1 - 138 (138/138)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 9, cyto_nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028943)
HIX0028943
HIT000427936
(
AK309070
)
(Voltage-dependent R-type calcium channel subunit alpha-1E; Brain calcium channel II; BII; Calcium channel, L type, alpha-1 polypeptide, isoform 6; Voltage-gated calcium channel subunit alpha Cav2.3;)
genome : 181,452,447 - 181,621,230 (168,784)
query : 1 - 2,140 (2,140/2,140)
7 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;0.993;1.000)3'
coverage = 1.000
InterPro :
IPR002077 : Voltage-dependent calcium channel, alpha-1 subunit
IPR005449 : Voltage-dependent calcium channel, R-type, alpha-1 subunit
IPR005821 : Ion transport domain
IPR027359 : Voltage-dependent channel, four helix bundle domain
GO :
0005216 : Molecular Function : ion channel activity
0005245 : Molecular Function : voltage-gated calcium channel activity
0005891 : Cellular Component : voltage-gated calcium channel complex
0006811 : Biological Process : ion transport
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
0070588 : Biological Process : calcium ion transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028943)
HIX0028943
HIT000632314 (
ENST00000533229
)
(Voltage-dependent R-type calcium channel subunit alpha-1E; Brain calcium channel II; BII; Calcium channel, L type, alpha-1 polypeptide, isoform 6; Voltage-gated calcium channel subunit alpha Cav2.3;)
genome : 181,452,447 - 181,621,230 (168,784)
query : 1 - 2,142 (2,142/2,142)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028943)
HIX0028943
HIT000348850 (
ENST00000367570
)
(Voltage-dependent R-type calcium channel subunit alpha-1E; Brain calcium channel II; BII; Calcium channel, L type, alpha-1 polypeptide, isoform 6; Voltage-gated calcium channel subunit alpha Cav2.3;)
genome : 181,452,716 - 181,770,716 (318,001)
query : 1 - 9,724 (9,724/9,724)
46 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028943)
HIX0028943
HIT000311402 (
ENST00000357570
)
(Voltage-dependent R-type calcium channel subunit alpha-1E; Brain calcium channel II; BII; Calcium channel, L type, alpha-1 polypeptide, isoform 6; Voltage-gated calcium channel subunit alpha Cav2.3;)
genome : 181,452,716 - 181,770,711 (317,996)
query : 1 - 9,848 (9,848/9,848)
47 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028943)
HIX0028943
HIT000312060 (
ENST00000358338
)
(Voltage-dependent R-type calcium channel subunit alpha-1E; Brain calcium channel II; BII; Calcium channel, L type, alpha-1 polypeptide, isoform 6; Voltage-gated calcium channel subunit alpha Cav2.3;)
genome : 181,452,716 - 181,770,711 (317,996)
query : 1 - 9,662 (9,662/9,662)
45 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028943)
HIX0028943
HIT000348847 (
ENST00000367567
)
(Voltage-dependent R-type calcium channel subunit alpha-1E; Brain calcium channel II; BII; Calcium channel, L type, alpha-1 polypeptide, isoform 6; Voltage-gated calcium channel subunit alpha Cav2.3;)
genome : 181,452,716 - 181,770,711 (317,996)
query : 1 - 9,719 (9,719/9,719)
46 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028943)
HIX0028943
HIT000192821
(
L29384
)
(Voltage-dependent R-type calcium channel subunit alpha-1E isoform 2.)
genome : 181,452,716 - 181,768,081 (315,366)
query : 1 - 7,032 (7,032/7,032)
45 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;0.993;1.000)3'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR002077 : Voltage-dependent calcium channel, alpha-1 subunit
IPR005449 : Voltage-dependent calcium channel, R-type, alpha-1 subunit
IPR005821 : Ion transport domain
IPR014873 : Voltage-dependent calcium channel, alpha-1 subunit, IQ domain
IPR027359 : Voltage-dependent channel, four helix bundle domain
GO :
0005216 : Molecular Function : ion channel activity
0005245 : Molecular Function : voltage-gated calcium channel activity
0005509 : Molecular Function : calcium ion binding
0005891 : Cellular Component : voltage-gated calcium channel complex
0006811 : Biological Process : ion transport
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
0070588 : Biological Process : calcium ion transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028943)
HIX0028943
HIT000192822
(
L29385
)
(Voltage-dependent R-type calcium channel subunit alpha-1E isoform 3.)
genome : 181,452,716 - 181,768,081 (315,366)
query : 1 - 7,089 (7,089/7,089)
46 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;0.993;1.000)3'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR002077 : Voltage-dependent calcium channel, alpha-1 subunit
IPR005449 : Voltage-dependent calcium channel, R-type, alpha-1 subunit
IPR005821 : Ion transport domain
IPR014873 : Voltage-dependent calcium channel, alpha-1 subunit, IQ domain
IPR027359 : Voltage-dependent channel, four helix bundle domain
GO :
0005216 : Molecular Function : ion channel activity
0005245 : Molecular Function : voltage-gated calcium channel activity
0005509 : Molecular Function : calcium ion binding
0005891 : Cellular Component : voltage-gated calcium channel complex
0006811 : Biological Process : ion transport
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
0070588 : Biological Process : calcium ion transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028943)
HIX0028943
HIT000313539 (
ENST00000360108
)
(Voltage-dependent R-type calcium channel subunit alpha-1E; Brain calcium channel II; BII; Calcium channel, L type, alpha-1 polypeptide, isoform 6; Voltage-gated calcium channel subunit alpha Cav2.3;)
genome : 181,452,874 - 181,768,048 (315,175)
query : 1 - 6,970 (6,970/6,970)
46 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028943)
HIX0028943
HIT000192738
(
L27745
)
Representative transcript
(Voltage-dependent R-type calcium channel subunit alpha-1E; Brain calcium channel II; BII; Calcium channel, L type, alpha-1 polypeptide, isoform 6; Voltage-gated calcium channel subunit alpha Cav2.3;)
genome : 181,452,881 - 181,768,095 (315,215)
query : 1 - 7,064 (7,064/7,110)
47 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.994
InterPro :
IPR002048 : EF-hand domain
IPR002077 : Voltage-dependent calcium channel, alpha-1 subunit
IPR005449 : Voltage-dependent calcium channel, R-type, alpha-1 subunit
IPR005821 : Ion transport domain
IPR014873 : Voltage-dependent calcium channel, alpha-1 subunit, IQ domain
IPR027359 : Voltage-dependent channel, four helix bundle domain
GO :
0005216 : Molecular Function : ion channel activity
0005245 : Molecular Function : voltage-gated calcium channel activity
0005509 : Molecular Function : calcium ion binding
0005891 : Cellular Component : voltage-gated calcium channel complex
0006811 : Biological Process : ion transport
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
0070588 : Biological Process : calcium ion transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028943)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB173719
Bos
sp. (Cow) : AF244126
Danio
sp. (Zebrafish) : ENSDART00000089967
Monodelphis
sp. (Opossum) : ENSMODT00000008509
Oryzias
sp. (Medaka) : ENSORLT00000021666
Oryzias
sp. (Medaka) : ENSORLT00000021779
Pongo
sp. (Orangutan) : ENSPPYT00000000522
Tetraodon
sp. (Tetraodon) : GSTENT00028843001
Rattus
sp. (Rat) : L15453
Mus
sp. (Mouse) : L29346
Takifugu
sp. (Fugu) : SINFRUT00000182768
Takifugu
sp. (Fugu) : SINFRUT00000183315
Equus
sp. (Horse) : XM_001914880
Danio
sp. (Zebrafish) : XM_001920742
Gallus
sp. (Chicken) : XM_422255
Canis
sp. (Dog) : XM_547425
Pan
sp. (Chimpanzee) : XR_024642
HIX0028943
HIT000348853 (
ENST00000367573
)
(Voltage-dependent R-type calcium channel subunit alpha-1E; Brain calcium channel II; BII; Calcium channel, L type, alpha-1 polypeptide, isoform 6; Voltage-gated calcium channel subunit alpha Cav2.3;)
genome : 181,452,881 - 181,768,095 (315,215)
query : 1 - 7,067 (7,067/7,067)
47 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028943)
HIX0214378
HIT000348887 (
ENST00000367607
)
(Centrosome-associated protein 350; Cep350; Centrosome-associated protein of 350 kDa;)
genome : 179,923,873 - 180,084,015 (160,143)
query : 1 - 13,491 (13,491/13,491)
38 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214378)
HIX0214378
HIT000205107 (
NM_014810
)
(Centrosome-associated protein 350; Cep350; Centrosome-associated protein of 350 kDa;)
genome : 179,923,908 - 180,084,015 (160,108)
query : 1 - 13,456 (13,456/13,473)
38 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214378)
HIX0214378
HIT000076327
(
AF287356
)
Representative transcript
(Centrosome-associated protein 350; Cep350; Centrosome-associated protein of 350 kDa;)
genome : 179,924,124 - 180,082,515 (158,392)
query : 1 - 11,740 (11,740/11,740)
38 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.988;1.000;1.000;
1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000938 : CAP Gly-rich domain
IPR028750 : Centrosome-associated protein 350
GO :
0005813 : Cellular Component : centrosome
0008017 : Molecular Function : microtubule binding
0034453 : Biological Process : microtubule anchoring
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214378)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB179086
Rattus
sp. (Rat) : AF287357
Mus
sp. (Mouse) : AK172956
Gallus
sp. (Chicken) : CR354032
Bos
sp. (Cow) : ENSBTAT00000010631
Canis
sp. (Dog) : ENSCAFT00000020139
Monodelphis
sp. (Opossum) : ENSMODT00000008023
Oryzias
sp. (Medaka) : ENSORLT00000021683
Pongo
sp. (Orangutan) : ENSPPYT00000000542
Tetraodon
sp. (Tetraodon) : GSTENT00028847001
Pan
sp. (Chimpanzee) : XM_001158487
Danio
sp. (Zebrafish) : XM_001343717
Equus
sp. (Horse) : XM_001488233
HIX0214378
HIT000003179
(
AK000704
)
(Centrosome-associated protein 350; Cep350; Centrosome-associated protein of 350 kDa;)
genome : 179,965,757 - 180,053,245 (87,489)
query : 1 - 3,518 (3,518/3,530)
21 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 18, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214378)
HIX0214436
HIT000197739 (
NM_000721
)
(Voltage-dependent calcium channel, R-type, alpha-1 subunit family protein.)
genome : 181,452,686 - 181,775,919 (323,234)
query : 1 - 14,957 (14,957/14,972)
46 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214436)
HIX0214436
HIT000657227 (
NM_001205293
)
(Voltage-dependent calcium channel, R-type, alpha-1 subunit family protein.)
genome : 181,452,686 - 181,775,919 (323,234)
query : 1 - 15,086 (15,086/15,101)
47 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214436)
HIX0214436
HIT000657228 (
NM_001205294
)
(Voltage-dependent calcium channel, R-type, alpha-1 subunit family protein.)
genome : 181,452,686 - 181,775,919 (323,234)
query : 1 - 14,900 (14,900/14,915)
45 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214436)
HIX0214436
HIT000625983 (
ENST00000526775
)
(Voltage-dependent calcium channel, R-type, alpha-1 subunit family protein.)
genome : 181,452,716 - 181,777,219 (324,504)
query : 1 - 16,170 (16,170/16,170)
45 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214436)
AL590632.5
180000001-180017215 F +
NCBI
AL645487.8
180017216-180021209 F +
NCBI
AL390718.11
180021210-180195332 F +
NCBI
AL139141.23
180195333-180307140 F +
NCBI
AL445469.4
180307141-180436544 F +
NCBI
AL358354.16
180436545-180568604 F +
NCBI
AL358434.16
180568605-180744979 F +
NCBI
AL603884.2
180744980-180746973 F +
NCBI
AL590085.4
180746974-180829030 F +
NCBI
AL162431.17
180829031-180966036 F +
NCBI
AL356267.27
180966037-181147744 F +
NCBI
AL358393.16
181147745-181195919 F +
NCBI
AL590624.8
181195920-181351698 F +
NCBI
AL160059.7
181351699-181503624 F +
NCBI
AL356500.14
181503625-181543365 F -
NCBI
AL359270.10
181543366-181600000 F +
NCBI