bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0028897
HIT000390190
(
BC130400
)
Representative transcript
(Serine protease 38; EC=3.4.21.-; Marapsin-2; Precursor;)
genome : 228,003,346 - 228,034,128 (30,783)
query : 1 - 1,272 (1,272/1,272)
5 exons
identity = 0.998
5'(1.000;1.000;0.996;0.993;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.-
InterPro :
IPR001254 : Peptidase S1
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR009003 : Trypsin-like cysteine/serine peptidase domain
IPR018114 : Peptidase S1, trypsin family, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028897)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK145810
Danio
sp. (Zebrafish) : BC097206
Gallus
sp. (Chicken) : ENSGALT00000011874
Monodelphis
sp. (Opossum) : ENSMODT00000017623
Pongo
sp. (Orangutan) : ENSPPYT00000000163
Rattus
sp. (Rat) : ENSRNOT00000050370
Tetraodon
sp. (Tetraodon) : GSTENT00029570001
Takifugu
sp. (Fugu) : SINFRUT00000132098
Macaca
sp. (Macaque) : XM_001086001
Equus
sp. (Horse) : XM_001493147
Pan
sp. (Chimpanzee) : XM_525080
Canis
sp. (Dog) : XM_532412
Bos
sp. (Cow) : XM_870985
HIX0028897
HIT000348037 (
ENST00000366757
)
(Serine protease 38; EC=3.4.21.-; Marapsin-2; Precursor;)
genome : 228,003,394 - 228,034,171 (30,778)
query : 1 - 1,267 (1,267/1,267)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028897)
HIX0028897
HIT000318925 (
NM_183062
)
(Serine protease 38; EC=3.4.21.-; Marapsin-2; Precursor;)
genome : 228,003,418 - 228,034,171 (30,754)
query : 1 - 1,243 (1,243/1,243)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028897)
HIX0203519
HIT000441583_14
(
DQ575052
)
Representative transcript
(Non-protein coding transcript.)
genome : 228,023,671 - 228,023,700 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203519)
HIX0023520
HIT000110846 (
ENST00000272164
)
(Protein Wnt-9a; Protein Wnt-14; Precursor;)
genome : 228,106,357 - 228,135,599 (29,243)
query : 1 - 3,971 (3,971/3,971)
4 exons
identity = 0.999
3'(1.000;0.985;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023520)
HIX0023520
HIT000050312
(
AK131041
)
(Protein Wnt-9a; Wnt-14; Precursor;)
genome : 228,106,358 - 228,135,631 (29,274)
query : 1 - 1,735 (1,735/1,735)
4 exons
identity = 0.990
3'(0.986;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005817 : Wnt
IPR013303 : Wnt-9a protein
GO :
0005102 : Molecular Function : receptor binding
0005576 : Cellular Component : extracellular region
0007275 : Biological Process : multicellular organismal development
0016055 : Biological Process : Wnt signaling pathway
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023520)
HIX0023520
HIT000601103 (
ENST00000497852
)
(Protein Wnt-9a; Wnt-14; Precursor;)
genome : 228,106,358 - 228,135,631 (29,274)
query : 1 - 1,743 (1,743/1,743)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023520)
HIX0023520
HIT000059822
(
AB060283
)
Representative transcript
(Protein Wnt-9a; Protein Wnt-14; Precursor;)
genome : 228,108,697 - 228,135,599 (26,903)
query : 1 - 1,631 (1,631/1,631)
4 exons
identity = 0.995
3'(0.997;0.985;0.996;1.000)5'
coverage = 1.000
InterPro :
IPR005817 : Wnt
IPR013303 : Wnt-9a protein
IPR018161 : Wnt protein, conserved site
GO :
0005102 : Molecular Function : receptor binding
0005576 : Cellular Component : extracellular region
0007275 : Biological Process : multicellular organismal development
0016055 : Biological Process : Wnt signaling pathway
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023520)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AF031168
Mus
sp. (Mouse) : AK087490
Danio
sp. (Zebrafish) : ENSDART00000098391
Macaca
sp. (Macaque) : ENSMMUT00000011660
Oryzias
sp. (Medaka) : ENSORLT00000022021
Pongo
sp. (Orangutan) : ENSPPYT00000000162
Rattus
sp. (Rat) : ENSRNOT00000004165
Tetraodon
sp. (Tetraodon) : GSTENT00016143001
Takifugu
sp. (Fugu) : SINFRUT00000177356
Monodelphis
sp. (Opossum) : XM_001376461
Equus
sp. (Horse) : XM_001493167
Pan
sp. (Chimpanzee) : XM_525081
Canis
sp. (Dog) : XM_539328
Bos
sp. (Cow) : XM_588619
HIX0023520
HIT000200231 (
NM_003395
)
(Protein Wnt-9a; Protein Wnt-14; Precursor;)
genome : 228,109,165 - 228,135,676 (26,512)
query : 1 - 1,240 (1,240/1,240)
4 exons
identity = 0.997
3'(1.000;0.985;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023520)
HIX0023520
HIT000340089
(
BC111960
)
(Protein Wnt-9a; Protein Wnt-14; Precursor;)
genome : 228,109,165 - 228,135,676 (26,512)
query : 1 - 1,240 (1,240/1,240)
4 exons
identity = 0.996
3'(1.000;0.985;0.996;1.000)5'
coverage = 1.000
InterPro :
IPR005817 : Wnt
IPR013303 : Wnt-9a protein
IPR018161 : Wnt protein, conserved site
GO :
0005102 : Molecular Function : receptor binding
0005576 : Cellular Component : extracellular region
0007275 : Biological Process : multicellular organismal development
0016055 : Biological Process : Wnt signaling pathway
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023520)
HIX0023520
HIT000386884
(
BC113431
)
(Protein Wnt-9a; Protein Wnt-14; Precursor;)
genome : 228,109,165 - 228,135,676 (26,512)
query : 1 - 1,240 (1,240/1,240)
4 exons
identity = 0.996
3'(1.000;0.985;0.996;1.000)5'
coverage = 1.000
InterPro :
IPR005817 : Wnt
IPR013303 : Wnt-9a protein
IPR018161 : Wnt protein, conserved site
GO :
0005102 : Molecular Function : receptor binding
0005576 : Cellular Component : extracellular region
0007275 : Biological Process : multicellular organismal development
0016055 : Biological Process : Wnt signaling pathway
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023520)
HIX0214072
HIT000696171 (
ENST00000584300
)
(Non-protein coding transcript.)
genome : 228,129,291 - 228,129,384 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214072)
HIX0214072
HIT000727212 (
NR_049806
)
(Non-protein coding transcript.)
genome : 228,129,291 - 228,129,384 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214072)
HIX0056843
HIT000659894_01 (
NR_037596
)
(Hypothetical protein.)
genome : 228,154,712 - 228,162,192 (7,481)
query : 1 - 4,817 (4,817/4,818)
4 exons
identity = 0.963
5'(0.928;0.983;0.969;0.938)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 10, cyto 4, cyto_pero 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000680356_01 (
ENST00000567343
)
(Hypothetical protein.)
genome : 228,155,147 - 228,156,048 (902)
query : 1 - 901 (901/901)
1 exon
identity = 0.973
5'(0.973)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 10, cyto_nucl 2, nucl 1.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000466405_10
(
DQ599874
)
(Non-protein coding transcript.)
genome : 228,155,294 - 228,155,325 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000466404_10
(
DQ599873
)
(Non-protein coding transcript.)
genome : 228,155,294 - 228,155,324 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000466403_10
(
DQ599872
)
(Non-protein coding transcript.)
genome : 228,155,294 - 228,155,323 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000442318_07
(
DQ575787
)
(Non-protein coding transcript.)
genome : 228,155,356 - 228,155,386 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000442319_07
(
DQ575788
)
(Non-protein coding transcript.)
genome : 228,155,356 - 228,155,385 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000451468_11
(
DQ584937
)
(Non-protein coding transcript.)
genome : 228,155,373 - 228,155,404 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000440849_11
(
DQ574318
)
(Non-protein coding transcript.)
genome : 228,155,388 - 228,155,417 (30)
query : 1 - 30 (30/31)
1 exon
identity = 0.967
5'(0.967)3'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000441366_11
(
DQ574835
)
(Non-protein coding transcript.)
genome : 228,155,402 - 228,155,433 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000466299_11
(
DQ599768
)
(Non-protein coding transcript.)
genome : 228,155,410 - 228,155,441 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000439598_06
(
DQ573067
)
(Non-protein coding transcript.)
genome : 228,155,483 - 228,155,513 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000441549_05
(
DQ575018
)
(Non-protein coding transcript.)
genome : 228,155,657 - 228,155,687 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000444055_05
(
DQ577524
)
(Non-protein coding transcript.)
genome : 228,155,904 - 228,155,934 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000439319_10
(
DQ572788
)
(Non-protein coding transcript.)
genome : 228,155,924 - 228,155,955 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000464938_05
(
DQ598407
)
(Non-protein coding transcript.)
genome : 228,156,023 - 228,156,052 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000456012_06
(
DQ589481
)
(Non-protein coding transcript.)
genome : 228,156,089 - 228,156,119 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000446570_06
(
DQ580039
)
(Non-protein coding transcript.)
genome : 228,156,240 - 228,156,269 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000451141_06
(
DQ584610
)
(Non-protein coding transcript.)
genome : 228,156,486 - 228,156,515 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000441038_07
(
DQ574507
)
(Non-protein coding transcript.)
genome : 228,156,545 - 228,156,575 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000441037_07
(
DQ574506
)
(Non-protein coding transcript.)
genome : 228,156,545 - 228,156,574 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000441190_03
(
DQ574659
)
(Non-protein coding transcript.)
genome : 228,156,673 - 228,156,703 (31)
query : 1 - 31 (31/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000441191_03
(
DQ574660
)
(Non-protein coding transcript.)
genome : 228,156,673 - 228,156,704 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000441189_03
(
DQ574658
)
(Non-protein coding transcript.)
genome : 228,156,673 - 228,156,703 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000441203_06
(
DQ574672
)
(Non-protein coding transcript.)
genome : 228,156,704 - 228,156,734 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000441801_09
(
DQ575270
)
(Non-protein coding transcript.)
genome : 228,156,753 - 228,156,784 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000441800_09
(
DQ575269
)
(Non-protein coding transcript.)
genome : 228,156,753 - 228,156,782 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000451470_07
(
DQ584939
)
(Non-protein coding transcript.)
genome : 228,157,032 - 228,157,062 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000524248_02 (
ENST00000426314
)
(Hypothetical protein.)
genome : 228,157,075 - 228,161,829 (4,755)
query : 1 - 2,486 (2,486/2,486)
2 exons
identity = 0.969
5'(0.976;0.953)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 12.1667, extr 8, cyto 7.5,
cyto_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000442993_08
(
DQ576462
)
(Non-protein coding transcript.)
genome : 228,157,100 - 228,157,129 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000460021_11
(
DQ593490
)
(Non-protein coding transcript.)
genome : 228,157,173 - 228,157,202 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000459005_03
(
DQ592474
)
(Non-protein coding transcript.)
genome : 228,157,174 - 228,157,203 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
5'(0.967)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000466330_03
(
DQ599799
)
(Non-protein coding transcript.)
genome : 228,157,174 - 228,157,203 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000466475_04
(
DQ599944
)
(Non-protein coding transcript.)
genome : 228,157,618 - 228,157,648 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000454770_05
(
DQ588239
)
(Non-protein coding transcript.)
genome : 228,157,674 - 228,157,704 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000441153_06
(
DQ574622
)
(Non-protein coding transcript.)
genome : 228,157,744 - 228,157,774 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000017809
(
AK092942
)
Representative transcript
(Conserved hypothetical protein.)
genome : 228,157,916 - 228,162,196 (4,281)
query : 1 - 2,251 (2,251/2,251)
2 exons
identity = 0.953
5'(0.959;0.946)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20.5, cyto_mito 11.6667, extr 4, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000457489_08
(
DQ590958
)
(Non-protein coding transcript.)
genome : 228,157,977 - 228,158,007 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000450463_06
(
DQ583932
)
(Non-protein coding transcript.)
genome : 228,158,249 - 228,158,278 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000442387_07
(
DQ575856
)
(Non-protein coding transcript.)
genome : 228,158,446 - 228,158,476 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000439701_06
(
DQ573170
)
(Non-protein coding transcript.)
genome : 228,159,037 - 228,159,067 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000441176_06
(
DQ574645
)
(Non-protein coding transcript.)
genome : 228,159,050 - 228,159,081 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000442486_06
(
DQ575955
)
(Non-protein coding transcript.)
genome : 228,159,050 - 228,159,081 (32)
query : 1 - 32 (32/32)
1 exon
identity = 0.969
5'(0.969)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0203536
HIT000442094_05
(
DQ575563
)
Representative transcript
(Non-protein coding transcript.)
genome : 228,159,462 - 228,159,492 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203536)
HIX0160108
HIT000454496_07
(
DQ587965
)
(Non-protein coding transcript.)
genome : 228,160,065 - 228,160,094 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160108)
HIX0160108
HIT000441542_06
(
DQ575011
)
Representative transcript
(Non-protein coding transcript.)
genome : 228,160,070 - 228,160,099 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160108)
HIX0203387
HIT000439701_07
(
DQ573170
)
(Non-protein coding transcript.)
genome : 228,160,169 - 228,160,199 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203387)
HIX0203387
HIT000441176_07
(
DQ574645
)
Representative transcript
(Non-protein coding transcript.)
genome : 228,160,182 - 228,160,213 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203387)
HIX0203387
HIT000442486_07
(
DQ575955
)
(Non-protein coding transcript.)
genome : 228,160,182 - 228,160,213 (32)
query : 1 - 32 (32/32)
1 exon
identity = 0.969
5'(0.969)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203387)
HIX0203537
HIT000442094_06
(
DQ575563
)
Representative transcript
(Non-protein coding transcript.)
genome : 228,160,594 - 228,160,624 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203537)
HIX0056843
HIT000454496_08
(
DQ587965
)
(Non-protein coding transcript.)
genome : 228,161,207 - 228,161,236 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0056843
HIT000441542_07
(
DQ575011
)
(Non-protein coding transcript.)
genome : 228,161,212 - 228,161,241 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056843)
HIX0213985
HIT000503849_02 (
ENST00000401754
)
(Hypothetical protein.)
genome : 228,162,980 - 228,163,386 (407)
query : 1 - 399 (399/399)
1 exon
identity = 0.973
3'(0.973)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213985)
HIX0213985
HIT000607425_01 (
ENST00000507432
)
(Hypothetical protein.)
genome : 228,162,980 - 228,163,386 (407)
query : 1 - 399 (399/399)
1 exon
identity = 0.980
3'(0.980)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213985)
HIX0213985
HIT000642949_01 (
ENST00000543904
)
(Hypothetical protein.)
genome : 228,162,980 - 228,163,386 (407)
query : 1 - 396 (396/396)
1 exon
identity = 0.951
3'(0.951)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213985)
HIX0178269
HIT000602947_02 (
ENST00000502609
)
(Hypothetical protein.)
genome : 228,163,049 - 228,165,859 (2,811)
query : 1 - 2,813 (2,813/2,813)
1 exon
identity = 0.976
5'(0.976)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, mito 7, cyto_plas 7, plas 4, nucl 3, E.R. 3,
pero 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178269)
HIX0178269
HIT000522937_01 (
ENST00000425003
)
(Hypothetical protein.)
genome : 228,163,091 - 228,165,894 (2,804)
query : 1 - 2,448 (2,448/2,448)
2 exons
identity = 0.991
5'(1.000;0.991)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178269)
HIX0178269
HIT000460367_04
(
DQ593836
)
Representative transcript
(Non-protein coding transcript.)
genome : 228,164,655 - 228,164,685 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178269)
HIX0178269
HIT000458476_04
(
DQ591945
)
(Non-protein coding transcript.)
genome : 228,165,298 - 228,165,327 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178269)
HIX0001654
HIT000211154 (
NM_033131
)
(Protein Wnt-3a; Precursor;)
genome : 228,194,723 - 228,248,971 (54,249)
query : 1 - 2,971 (2,971/2,988)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, lyso 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001654)
HIX0001654
HIT000012892
(
AK056278
)
(Protein Wnt-3a; Precursor;)
genome : 228,194,752 - 228,248,961 (54,210)
query : 1 - 2,932 (2,932/2,932)
4 exons
identity = 0.999
5'(0.993;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005817 : Wnt
IPR009141 : Wnt-3 protein
IPR018161 : Wnt protein, conserved site
GO :
0005102 : Molecular Function : receptor binding
0005576 : Cellular Component : extracellular region
0007275 : Biological Process : multicellular organismal development
0016055 : Biological Process : Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001654)
HIX0001654
HIT000112499 (
ENST00000284523
)
(Protein Wnt-3a; Precursor;)
genome : 228,194,752 - 228,248,961 (54,210)
query : 1 - 2,932 (2,932/2,932)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001654)
HIX0001654
HIT000337473
(
BC103921
)
Representative transcript
(Protein Wnt-3a; Precursor;)
genome : 228,194,783 - 228,248,168 (53,386)
query : 1 - 1,368 (1,368/1,369)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR005817 : Wnt
IPR009141 : Wnt-3 protein
IPR018161 : Wnt protein, conserved site
GO :
0005102 : Molecular Function : receptor binding
0005576 : Cellular Component : extracellular region
0007275 : Biological Process : multicellular organismal development
0016055 : Biological Process : Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 3, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001654)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AB024080
Danio
sp. (Zebrafish) : AY613787
Equus
sp. (Horse) : ENSECAT00000021041
Macaca
sp. (Macaque) : ENSMMUT00000006924
Oryzias
sp. (Medaka) : ENSORLT00000022016
Pongo
sp. (Orangutan) : ENSPPYT00000000161
Pan
sp. (Chimpanzee) : ENSPTRT00000058128
Takifugu
sp. (Fugu) : SINFRUT00000168750
Mus
sp. (Mouse) : X56842
Monodelphis
sp. (Opossum) : XM_001376481
Rattus
sp. (Rat) : XM_220546
Canis
sp. (Dog) : XM_539327
Bos
sp. (Cow) : XM_600750
HIX0001654
HIT000337475
(
BC103923
)
(Protein Wnt-3a; Precursor;)
genome : 228,194,783 - 228,248,168 (53,386)
query : 1 - 1,368 (1,368/1,369)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR005817 : Wnt
IPR009141 : Wnt-3 protein
IPR018161 : Wnt protein, conserved site
GO :
0005102 : Molecular Function : receptor binding
0005576 : Cellular Component : extracellular region
0007275 : Biological Process : multicellular organismal development
0016055 : Biological Process : Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 3, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001654)
HIX0001654
HIT000348033 (
ENST00000366753
)
(Protein Wnt-3a; Precursor;)
genome : 228,194,783 - 228,248,168 (53,386)
query : 1 - 1,368 (1,368/1,368)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 3, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001654)
HIX0001654
HIT000337474
(
BC103922
)
(Protein Wnt-3a; Precursor;)
genome : 228,194,783 - 228,247,292 (52,510)
query : 1 - 1,232 (1,232/1,244)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.998)3'
coverage = 0.990
InterPro :
IPR005817 : Wnt
IPR009141 : Wnt-3 protein
IPR018161 : Wnt protein, conserved site
GO :
0005102 : Molecular Function : receptor binding
0005576 : Cellular Component : extracellular region
0007275 : Biological Process : multicellular organismal development
0016055 : Biological Process : Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001654)
HIX0001654
HIT000059823
(
AB060284
)
(Protein Wnt-3a; Precursor;)
genome : 228,194,825 - 228,247,657 (52,833)
query : 1 - 1,555 (1,555/1,555)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005817 : Wnt
IPR009141 : Wnt-3 protein
IPR018161 : Wnt protein, conserved site
GO :
0005102 : Molecular Function : receptor binding
0005576 : Cellular Component : extracellular region
0007275 : Biological Process : multicellular organismal development
0016055 : Biological Process : Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001654)
HIX0001655
HIT000025760
(
AL137472
)
Representative transcript
(Conserved hypothetical protein.)
genome : 228,261,610 - 228,264,251 (2,642)
query : 1 - 2,642 (2,642/2,679)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 10.1667, nucl 8.5, cyto 8.5,
cyto_pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001655)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000003962
Pongo
sp. (Orangutan) : ENSPPYT00000000160
Pan
sp. (Chimpanzee) : ENSPTRT00000058127
HIX0001656
HIT000003095
(
AK000620
)
Representative transcript
(ADP-ribosylation factor 1;)
genome : 228,270,361 - 228,286,910 (16,550)
query : 1 - 1,885 (1,885/1,911)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169501
Gallus
sp. (Chicken) : AJ719484
Mus
sp. (Mouse) : AK151225
Danio
sp. (Zebrafish) : BC044531
Danio
sp. (Zebrafish) : BC046063
Rattus
sp. (Rat) : BC061552
Bos
sp. (Cow) : BC102874
Oryzias
sp. (Medaka) : ENSORLT00000022012
Pongo
sp. (Orangutan) : ENSPPYT00000000159
Tetraodon
sp. (Tetraodon) : GSTENT00027264001
Takifugu
sp. (Fugu) : SINFRUT00000183255
Pan
sp. (Chimpanzee) : XM_001144451
Monodelphis
sp. (Opossum) : XM_001370282
Equus
sp. (Horse) : XM_001494630
Canis
sp. (Dog) : XM_844001
HIX0001656
HIT000198597 (
NM_001658
)
(ADP-ribosylation factor 1;)
genome : 228,270,361 - 228,286,913 (16,553)
query : 1 - 1,888 (1,888/1,901)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000365681 (
NM_001024226
)
(ADP-ribosylation factor 1;)
genome : 228,270,361 - 228,286,913 (16,553)
query : 1 - 1,973 (1,973/1,986)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000639696 (
ENST00000540651
)
(ADP-ribosylation factor 1;)
genome : 228,270,361 - 228,286,912 (16,552)
query : 1 - 1,972 (1,972/1,972)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000110832 (
ENST00000272102
)
(ADP-ribosylation factor 1;)
genome : 228,270,361 - 228,286,910 (16,550)
query : 1 - 1,885 (1,885/1,885)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000035215
(
BC011358
)
(ADP-ribosylation factor 1;)
genome : 228,270,410 - 228,286,910 (16,501)
query : 1 - 1,836 (1,836/1,854)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000492416
(
AK297792
)
(ADP-ribosylation factor 1;)
genome : 228,270,418 - 228,286,550 (16,133)
query : 1 - 1,435 (1,435/1,435)
5 exons
identity = 0.986
5'(1.000;0.995;1.000;0.857;0.995)3'
coverage = 1.000
InterPro :
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, mito 12, cyto_mito 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000488177
(
AK293553
)
(ADP-ribosylation factor 1;)
genome : 228,270,418 - 228,286,492 (16,075)
query : 1 - 1,362 (1,362/1,362)
5 exons
identity = 0.958
5'(1.000;0.984;1.000;0.756;0.973)3'
coverage = 1.000
InterPro :
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, mito 10, extr 5, E.R._mito 5, mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000014482
(
AK057875
)
(ADP-ribosylation factor 1;)
genome : 228,270,423 - 228,286,910 (16,488)
query : 1 - 1,823 (1,823/1,823)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000195670
(
M36340
)
(ADP-ribosylation factor 1;)
genome : 228,270,431 - 228,286,910 (16,480)
query : 5 - 1,816 (1,812/1,816)
5 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;0.995)3'
coverage = 0.998
InterPro :
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000581950 (
ENST00000477821
)
(ADP-ribosylation factor 1;)
genome : 228,270,428 - 228,286,877 (16,450)
query : 1 - 666 (666/666)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 12, cyto 9, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000064374
(
AF052179
)
(ADP-ribosylation factor 1;)
genome : 228,270,429 - 228,286,825 (16,397)
query : 1 - 1,732 (1,732/1,757)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000050008
(
AK130737
)
(ADP-ribosylation factor 1;)
genome : 228,270,431 - 228,286,911 (16,481)
query : 1 - 1,815 (1,815/1,815)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000575135 (
ENST00000470670
)
(ADP-ribosylation factor 1;)
genome : 228,270,431 - 228,285,728 (15,298)
query : 1 - 712 (712/712)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9, cyto_nucl 8.5, cyto_mito 8.5, cyto 7.5,
nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000196563
(
M84326
)
(ADP-ribosylation factor 1;)
genome : 228,270,432 - 228,286,911 (16,480)
query : 1 - 1,815 (1,815/1,815)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000064613
(
AF055002
)
(ADP-ribosylation factor 1;)
genome : 228,270,432 - 228,286,825 (16,394)
query : 1 - 1,727 (1,727/1,753)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000014445
(
AK057838
)
(ADP-ribosylation factor 1;)
genome : 228,270,433 - 228,286,824 (16,392)
query : 1 - 1,727 (1,727/1,727)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000034937
(
BC010429
)
(ADP-ribosylation factor 1;)
genome : 228,270,436 - 228,286,910 (16,475)
query : 1 - 1,810 (1,810/1,841)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000582531 (
ENST00000478424
)
(ADP-ribosylation factor 1;)
genome : 228,270,442 - 228,286,080 (15,639)
query : 1 - 1,059 (1,059/1,059)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000575027 (
ENST00000470558
)
(ADP-ribosylation factor 1;)
genome : 228,270,490 - 228,285,889 (15,400)
query : 1 - 820 (820/820)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000578257 (
ENST00000473949
)
(ADP-ribosylation factor 1;)
genome : 228,270,492 - 228,285,595 (15,104)
query : 1 - 578 (578/578)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, mito 12, cyto_mito 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000581598 (
ENST00000477451
)
(ADP-ribosylation factor 1;)
genome : 228,270,786 - 228,285,356 (14,571)
query : 1 - 789 (789/789)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 11, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000582448 (
ENST00000478336
)
(ADP-ribosylation factor 1;)
genome : 228,270,838 - 228,285,823 (14,986)
query : 1 - 930 (930/930)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000365682 (
NM_001024227
)
(ADP-ribosylation factor 1;)
genome : 228,270,851 - 228,286,913 (16,063)
query : 1 - 2,007 (2,007/2,020)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000365683 (
NM_001024228
)
(ADP-ribosylation factor 1;)
genome : 228,270,851 - 228,286,913 (16,063)
query : 1 - 1,985 (1,985/1,998)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000640227 (
ENST00000541182
)
(ADP-ribosylation factor 1;)
genome : 228,270,851 - 228,286,912 (16,062)
query : 1 - 2,006 (2,006/2,006)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000573766 (
ENST00000469235
)
(ADP-ribosylation factor 1;)
genome : 228,270,851 - 228,285,649 (14,799)
query : 1 - 678 (678/678)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000577874 (
ENST00000473546
)
(Non-protein coding transcript.)
genome : 228,270,885 - 228,284,900 (14,016)
query : 1 - 291 (291/291)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000586870 (
ENST00000482962
)
(ADP-ribosylation factor 1;)
genome : 228,270,923 - 228,285,597 (14,675)
query : 1 - 597 (597/597)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 12, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001657
HIT000015396
(
AK090529
)
Representative transcript
(Conserved hypothetical protein.)
genome : 228,271,991 - 228,274,216 (2,226)
query : 1 - 2,226 (2,226/2,226)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 7.5, cyto_pero 6, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001657)
HIX0001656
HIT000600456 (
ENST00000497165
)
(ADP-ribosylation factor 1;)
genome : 228,275,817 - 228,285,644 (9,828)
query : 1 - 675 (675/675)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, mito 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000007077
(
AK023803
)
(Conserved hypothetical protein.)
genome : 228,277,551 - 228,281,462 (3,912)
query : 1 - 3,915 (3,915/3,915)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 8.66667, cyto 7, nucl 6,
cyto_pero 5.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000594252 (
ENST00000490705
)
(ADP-ribosylation factor 1;)
genome : 228,278,189 - 228,285,154 (6,966)
query : 1 - 881 (881/881)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, mito 11, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000490644
(
AK296020
)
(ADP-ribosylation factor 1;)
genome : 228,284,759 - 228,286,824 (2,066)
query : 12 - 1,647 (1,636/1,647)
4 exons
identity = 0.996
5'(0.971;1.000;1.000;1.000)3'
coverage = 0.993
InterPro :
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000034227
(
BC009247
)
(ADP-ribosylation factor 1;)
genome : 228,284,759 - 228,286,910 (2,152)
query : 1 - 1,797 (1,797/1,815)
4 exons
identity = 0.997
5'(0.971;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000080729
(
AF493881
)
(ADP-ribosylation factor 1;)
genome : 228,284,816 - 228,285,714 (899)
query : 1 - 546 (546/546)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000100313
(
BT007393
)
(ADP-ribosylation factor 1;)
genome : 228,284,816 - 228,285,712 (897)
query : 1 - 544 (544/546)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.996
InterPro :
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000659777 (
NR_037415
)
(Non-protein coding transcript.)
genome : 228,284,964 - 228,285,042 (79)
query : 1 - 79 (79/79)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000696337 (
ENST00000584469
)
(Non-protein coding transcript.)
genome : 228,284,964 - 228,285,042 (79)
query : 1 - 79 (79/79)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000445978
(
DQ579447
)
(Non-protein coding transcript.)
genome : 228,285,317 - 228,285,345 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001656
HIT000087486
(
BC010415
)
(Hypothetical protein.)
genome : 228,285,687 - 228,286,910 (1,224)
query : 1 - 1,224 (1,224/1,242)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 8, cyto 6, nucl 3, cyto_pero 3,
cyto_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001656)
HIX0001659
HIT000260497
(
BC062585
)
(Multiple myeloma tumor-associated protein 2; hMMTAG2;)
genome : 228,288,433 - 228,291,019 (2,587)
query : 1 - 1,426 (1,426/1,510)
7 exons
identity = 0.999
3'(0.998;1.000;0.997;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019315 : Kinase phosphorylation domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 12.5, extr 6, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001659)
HIX0001659
HIT000031233
(
BC002843
)
Representative transcript
(Multiple myeloma tumor-associated protein 2; hMMTAG2;)
genome : 228,288,428 - 228,291,022 (2,595)
query : 1 - 1,290 (1,290/1,307)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR019315 : Kinase phosphorylation domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001659)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC002181
Rattus
sp. (Rat) : BC086951
Bos
sp. (Cow) : BT021507
Gallus
sp. (Chicken) : BX934891
Tetraodon
sp. (Tetraodon) : CR695333
Danio
sp. (Zebrafish) : ENSDART00000020463
Macaca
sp. (Macaque) : ENSMMUT00000003960
Oryzias
sp. (Medaka) : ENSORLT00000022009
Pongo
sp. (Orangutan) : ENSPPYT00000000158
Takifugu
sp. (Fugu) : SINFRUT00000156900
Monodelphis
sp. (Opossum) : XM_001376669
Canis
sp. (Dog) : XM_843976
Pan
sp. (Chimpanzee) : XR_020537
HIX0001659
HIT000209174 (
NM_024319
)
(Multiple myeloma tumor-associated protein 2; hMMTAG2;)
genome : 228,288,428 - 228,291,022 (2,595)
query : 1 - 1,290 (1,290/1,307)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001659)
HIX0001659
HIT000084695
(
AY137773
)
(Multiple myeloma tumor-associated protein 2; hMMTAG2;)
genome : 228,288,433 - 228,291,024 (2,592)
query : 1 - 1,287 (1,287/1,300)
8 exons
identity = 0.996
3'(0.998;1.000;0.988;1.000;1.000;1.000;1.000;
0.984)5'
coverage = 1.000
InterPro :
IPR019315 : Kinase phosphorylation domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001659)
HIX0001659
HIT000043250
(
AK123377
)
(Multiple myeloma tumor-associated protein 2; hMMTAG2;)
genome : 228,288,427 - 228,291,142 (2,716)
query : 2 - 2,257 (2,256/2,257)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019315 : Kinase phosphorylation domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 10, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001659)
HIX0001659
HIT000574287 (
ENST00000469781
)
(Multiple myeloma tumor-associated protein 2; hMMTAG2;)
genome : 228,288,427 - 228,291,142 (2,716)
query : 1 - 2,256 (2,256/2,256)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 10, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001659)
HIX0001659
HIT000110840 (
ENST00000272139
)
(Multiple myeloma tumor-associated protein 2; hMMTAG2;)
genome : 228,288,432 - 228,291,163 (2,732)
query : 1 - 1,427 (1,427/1,427)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001659)
HIX0001659
HIT000589679 (
ENST00000485896
)
(Multiple myeloma tumor-associated protein 2; hMMTAG2;)
genome : 228,288,432 - 228,291,021 (2,590)
query : 1 - 1,429 (1,429/1,429)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 12.5, extr 6, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001659)
HIX0001659
HIT000045960
(
AK126087
)
(Multiple myeloma tumor-associated protein 2; hMMTAG2;)
genome : 228,288,434 - 228,293,112 (4,679)
query : 1 - 3,554 (3,554/3,554)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019315 : Kinase phosphorylation domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001659)
HIX0001659
HIT000576986 (
ENST00000472617
)
(Multiple myeloma tumor-associated protein 2; hMMTAG2;)
genome : 228,288,434 - 228,293,112 (4,679)
query : 1 - 3,554 (3,554/3,554)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001659)
HIX0001659
HIT000596224 (
ENST00000492757
)
(Multiple myeloma tumor-associated protein 2; hMMTAG2;)
genome : 228,289,114 - 228,290,703 (1,590)
query : 1 - 548 (548/548)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001659)
HIX0001659
HIT000569905 (
ENST00000465199
)
(Multiple myeloma tumor-associated protein 2; hMMTAG2;)
genome : 228,289,757 - 228,291,148 (1,392)
query : 1 - 588 (588/588)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001659)
HIX0001659
HIT000594820 (
ENST00000491293
)
(Multiple myeloma tumor-associated protein 2; hMMTAG2;)
genome : 228,289,943 - 228,291,090 (1,148)
query : 1 - 854 (854/854)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001659)
HIX0116550
HIT000442200
(
DQ575669
)
Representative transcript
(Non-protein coding transcript.)
genome : 228,293,592 - 228,293,620 (29)
query : 2 - 30 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116550)
HIX0001660
HIT000056392
(
BX647745
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,390 - 228,296,984 (2,595)
query : 3 - 541 (539/651)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.994
InterPro :
IPR018615 : Ribosomal protein L55, mitochondrial
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000053830
(
BC052806
)
Representative transcript
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,388 - 228,296,983 (2,596)
query : 1 - 578 (578/608)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR018615 : Ribosomal protein L55, mitochondrial
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171214
Mus
sp. (Mouse) : AK012143
Bos
sp. (Cow) : BC112839
Pongo
sp. (Orangutan) : ENSPPYT00000000157
Rattus
sp. (Rat) : ENSRNOT00000003931
Monodelphis
sp. (Opossum) : XM_001376711
Equus
sp. (Horse) : XM_001494754
Canis
sp. (Dog) : XM_843940
Pan
sp. (Chimpanzee) : XR_020676
HIX0001660
HIT000318302 (
NM_181441
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,380 - 228,297,013 (2,634)
query : 1 - 690 (690/707)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000318308 (
NM_181454
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,380 - 228,297,013 (2,634)
query : 1 - 683 (683/700)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000318309 (
NM_181455
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,380 - 228,297,013 (2,634)
query : 1 - 686 (686/703)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000318310 (
NM_181456
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,380 - 228,297,013 (2,634)
query : 1 - 728 (728/745)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000318316 (
NM_181462
)
(39S ribosomal protein L55, mitochondrial isoform b.)
genome : 228,294,380 - 228,297,013 (2,634)
query : 1 - 865 (865/882)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 5.5, cyto_nucl 5, cyto_pero 3.83333,
mito_nucl 3.83333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000318317 (
NM_181463
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,380 - 228,297,013 (2,634)
query : 1 - 757 (757/774)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000318318 (
NM_181464
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,380 - 228,297,013 (2,634)
query : 1 - 645 (645/662)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000318319 (
NM_181465
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,380 - 228,297,013 (2,634)
query : 1 - 578 (578/595)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000130027 (
ENST00000336300
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,380 - 228,297,007 (2,628)
query : 1 - 722 (722/722)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000114032 (
ENST00000295008
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,380 - 228,297,000 (2,621)
query : 1 - 632 (632/632)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000130121 (
ENST00000336520
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,380 - 228,297,000 (2,621)
query : 1 - 744 (744/744)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000348026 (
ENST00000366746
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,380 - 228,297,000 (2,621)
query : 1 - 565 (565/565)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000348027 (
ENST00000366747
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,380 - 228,297,000 (2,621)
query : 1 - 603 (603/603)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000570098 (
ENST00000465397
)
(39S ribosomal protein L55, mitochondrial isoform b.)
genome : 228,294,380 - 228,297,000 (2,621)
query : 1 - 1,423 (1,423/1,423)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000307593 (
ENST00000348259
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,380 - 228,296,984 (2,605)
query : 1 - 661 (661/661)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000348024 (
ENST00000366744
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,380 - 228,296,981 (2,602)
query : 1 - 726 (726/726)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000348022 (
ENST00000366742
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,380 - 228,296,756 (2,377)
query : 1 - 630 (630/630)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000348019 (
ENST00000366739
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,380 - 228,296,732 (2,353)
query : 1 - 641 (641/641)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000348020 (
ENST00000366740
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,380 - 228,296,732 (2,353)
query : 1 - 644 (644/644)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000348021 (
ENST00000366741
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,380 - 228,296,732 (2,353)
query : 1 - 603 (603/603)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000348018 (
ENST00000366738
)
(39S ribosomal protein L55, mitochondrial isoform b.)
genome : 228,294,380 - 228,296,726 (2,347)
query : 1 - 705 (705/705)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 5.5, cyto_nucl 5, cyto_pero 3.83333,
mito_nucl 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000348016 (
ENST00000366736
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,380 - 228,296,717 (2,338)
query : 1 - 660 (660/660)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000348015 (
ENST00000366735
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,380 - 228,296,705 (2,326)
query : 1 - 1,212 (1,212/1,212)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000348014 (
ENST00000366734
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,380 - 228,296,598 (2,219)
query : 1 - 990 (990/990)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000348013 (
ENST00000366733
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,380 - 228,296,445 (2,066)
query : 1 - 834 (834/834)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000348012 (
ENST00000366732
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,380 - 228,296,343 (1,964)
query : 1 - 723 (723/723)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, mito_nucl 12.6667, mito_pero 8.83333, nucl 8,
extr 6, cyto_nucl 5.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000564742 (
ENST00000459783
)
(39S ribosomal protein L55, mitochondrial isoform b.)
genome : 228,294,380 - 228,296,026 (1,647)
query : 1 - 694 (694/694)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000569972 (
ENST00000465268
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,380 - 228,295,976 (1,597)
query : 1 - 848 (848/848)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000475365 (
ENST00000391867
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,381 - 228,297,013 (2,633)
query : 1 - 685 (685/685)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000528367 (
ENST00000430433
)
(39S ribosomal protein L55, mitochondrial isoform b.)
genome : 228,294,381 - 228,297,013 (2,633)
query : 1 - 864 (864/864)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 5.5, cyto_nucl 5, cyto_pero 3.83333,
mito_nucl 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000252815
(
AY358771
)
(39S ribosomal protein L55, mitochondrial isoform b.)
genome : 228,294,388 - 228,296,724 (2,337)
query : 1 - 695 (695/695)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR018615 : Ribosomal protein L55, mitochondrial
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 5.5, cyto_nucl 5, cyto_pero 3.83333,
mito_nucl 3.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000013601
(
AK056987
)
(39S ribosomal protein L55, mitochondrial isoform b.)
genome : 228,294,389 - 228,297,000 (2,612)
query : 1 - 1,414 (1,414/1,414)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR018615 : Ribosomal protein L55, mitochondrial
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000348011 (
ENST00000366731
)
(39S ribosomal protein L55, mitochondrial isoform b.)
genome : 228,294,389 - 228,297,000 (2,612)
query : 1 - 1,361 (1,361/1,361)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 5.5, cyto_nucl 5, cyto_pero 3.83333,
mito_nucl 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000509398 (
ENST00000411464
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,389 - 228,297,000 (2,612)
query : 1 - 1,253 (1,253/1,253)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
pHIT000003527 ( pHIT000003527 )
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,461 - 228,297,036 (2,576)
query : 1 - 324 (324/324)
3 exons
InterPro :
IPR018615 : Ribosomal protein L55, mitochondrial
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
CAGE tag :
H21BA02J1509
HIX0001660
HIT000555198 (
ENST00000457264
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,295,368 - 228,297,001 (1,634)
query : 1 - 544 (544/544)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto_nucl 2.5, extr 2, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000568672 (
ENST00000463898
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,295,468 - 228,296,717 (1,250)
query : 1 - 767 (767/767)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto_nucl 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000601018 (
ENST00000497758
)
(39S ribosomal protein L55, mitochondrial isoform b.)
genome : 228,295,486 - 228,296,274 (789)
query : 1 - 470 (470/470)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000568913 (
ENST00000464148
)
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,295,525 - 228,297,003 (1,479)
query : 1 - 636 (636/636)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto_nucl 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000580055 (
ENST00000475832
)
(Hypothetical short protein.)
genome : 228,295,760 - 228,296,732 (973)
query : 1 - 858 (858/858)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 10, nucl 8.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000577409 (
ENST00000473066
)
(Hypothetical short protein.)
genome : 228,295,815 - 228,296,991 (1,177)
query : 1 - 820 (820/820)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto_nucl 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000595665 (
ENST00000492170
)
(Non-protein coding transcript.)
genome : 228,295,927 - 228,296,997 (1,071)
query : 1 - 241 (241/241)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000580469 (
ENST00000476267
)
(Non-protein coding transcript.)
genome : 228,295,933 - 228,296,737 (805)
query : 1 - 169 (169/169)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000598797 (
ENST00000495434
)
(Non-protein coding transcript.)
genome : 228,295,936 - 228,296,996 (1,061)
query : 1 - 224 (224/224)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000587061 (
ENST00000483159
)
(Hypothetical short protein.)
genome : 228,295,948 - 228,296,979 (1,032)
query : 1 - 790 (790/790)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto_nucl 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000599247 (
ENST00000495899
)
(Hypothetical short protein.)
genome : 228,295,963 - 228,296,991 (1,029)
query : 1 - 790 (790/790)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto_nucl 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0001660
HIT000593034 (
ENST00000489430
)
(Hypothetical short protein.)
genome : 228,295,991 - 228,296,955 (965)
query : 1 - 847 (847/847)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 10, nucl 8.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
HIX0160313
HIT000512661 (
ENST00000414727
)
(Conserved hypothetical protein.)
genome : 228,302,698 - 228,303,174 (477)
query : 1 - 477 (477/477)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_nucl 11, extr 9, mito 6, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160313)
HIX0001661
HIT000019633
(
AK094778
)
Representative transcript
(Conserved hypothetical protein.)
genome : 228,309,224 - 228,311,472 (2,249)
query : 1 - 2,248 (2,248/2,248)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 7.5, cyto_nucl 5, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001661)
HIX0160289
HIT000511789 (
ENST00000413855
)
(Ribosomal protein S28e family protein.)
genome : 228,322,486 - 228,322,693 (208)
query : 1 - 208 (208/208)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, extr 8, nucl 7.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160289)
HIX0001662
HIT000348010 (
ENST00000366730
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,327,663 - 228,336,541 (8,879)
query : 1 - 937 (937/937)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 7, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000722716 (
NM_001242839
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,327,785 - 228,336,656 (8,872)
query : 1 - 930 (930/930)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 7, cyto_nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000197868 (
NM_000858
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,327,929 - 228,336,656 (8,728)
query : 1 - 1,155 (1,155/1,155)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 7, cyto_nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000475363 (
ENST00000391865
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,327,929 - 228,336,656 (8,728)
query : 1 - 990 (990/990)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, pero 3, extr 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000561752 (
NM_001159390
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,327,929 - 228,336,656 (8,728)
query : 1 - 990 (990/990)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, pero 3, extr 2, cyto 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000722717 (
NM_001242840
)
(Guanylate kinase isoform c.)
genome : 228,327,929 - 228,336,656 (8,728)
query : 1 - 904 (904/904)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 5, extr 3, cyto_nucl 3, cyto_golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000567628 (
ENST00000462807
)
(Guanylate kinase isoform a.)
genome : 228,327,929 - 228,335,394 (7,466)
query : 1 - 628 (628/628)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, extr 6, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000596656 (
ENST00000493209
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,327,966 - 228,334,653 (6,688)
query : 1 - 735 (735/735)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14.5, cyto 8, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000589624 (
ENST00000485838
)
(Guanylate kinase isoform c.)
genome : 228,327,967 - 228,336,583 (8,617)
query : 1 - 774 (774/774)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 8.5, cyto_nucl 7.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000498469
(
AK303845
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,327,976 - 228,336,644 (8,669)
query : 1 - 931 (931/931)
8 exons
identity = 0.998
5'(0.989;1.000;1.000;1.000;0.993;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
InterPro :
IPR008144 : Guanylate kinase-like
IPR008145 : Guanylate kinase/L-type calcium channel beta subunit
IPR017665 : Guanylate kinase
IPR020590 : Guanylate kinase, conserved site
GO :
0004385 : Molecular Function : guanylate kinase activity
0005515 : Molecular Function : protein binding
0006163 : Biological Process : purine nucleotide metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, pero 3, extr 2, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000574468 (
ENST00000469973
)
(Conserved hypothetical protein.)
genome : 228,327,980 - 228,329,534 (1,555)
query : 1 - 795 (795/795)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 8.5, nucl 6.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000588906 (
ENST00000485083
)
(Guanylate kinase isoform a.)
genome : 228,327,983 - 228,334,609 (6,627)
query : 1 - 871 (871/871)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000348006 (
ENST00000366726
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,327,990 - 228,336,581 (8,592)
query : 1 - 873 (873/873)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 7, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000032703
(
BC006249
)
Representative transcript
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,327,991 - 228,336,645 (8,655)
query : 1 - 1,082 (1,082/1,100)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
InterPro :
IPR008144 : Guanylate kinase-like
IPR008145 : Guanylate kinase/L-type calcium channel beta subunit
IPR017665 : Guanylate kinase
IPR020590 : Guanylate kinase, conserved site
GO :
0004385 : Molecular Function : guanylate kinase activity
0005515 : Molecular Function : protein binding
0006163 : Biological Process : purine nucleotide metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 7, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC024625
Danio
sp. (Zebrafish) : BC059491
Danio
sp. (Zebrafish) : BC071445
Bos
sp. (Cow) : BC102478
Gallus
sp. (Chicken) : BX932143
Equus
sp. (Horse) : ENSECAT00000020630
Oryzias
sp. (Medaka) : ENSORLT00000006890
Oryzias
sp. (Medaka) : ENSORLT00000022000
Pongo
sp. (Orangutan) : ENSPPYT00000000156
Rattus
sp. (Rat) : ENSRNOT00000003926
Tetraodon
sp. (Tetraodon) : GSTENT00028903001
Takifugu
sp. (Fugu) : SINFRUT00000150429
Macaca
sp. (Macaque) : XM_001084485
Pan
sp. (Chimpanzee) : XM_001142469
Monodelphis
sp. (Opossum) : XM_001376737
Monodelphis
sp. (Opossum) : XM_001378755
Canis
sp. (Dog) : XM_850632
HIX0001662
HIT000348008 (
ENST00000366728
)
(Guanylate kinase isoform c.)
genome : 228,327,991 - 228,336,656 (8,666)
query : 1 - 842 (842/842)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 5, extr 3, cyto_nucl 3, cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000119478 (
ENST00000312726
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,327,991 - 228,336,647 (8,657)
query : 1 - 1,084 (1,084/1,084)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 7, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000596334 (
ENST00000492871
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,327,991 - 228,336,647 (8,657)
query : 1 - 1,065 (1,065/1,065)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto_nucl 8, nucl 6.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000551877 (
ENST00000453943
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,327,999 - 228,336,392 (8,394)
query : 1 - 656 (656/656)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, extr 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000348003 (
ENST00000366723
)
(Guanylate kinase isoform c.)
genome : 228,328,003 - 228,336,534 (8,532)
query : 1 - 844 (844/844)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, extr 5, cyto 2, pero 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000596590 (
ENST00000493138
)
(Guanylate kinase isoform c.)
genome : 228,328,008 - 228,336,578 (8,571)
query : 1 - 694 (694/694)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 7, cyto_nucl 5.5, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000334330
(
BC091480
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,328,009 - 228,336,645 (8,637)
query : 1 - 899 (899/913)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
InterPro :
IPR008144 : Guanylate kinase-like
IPR008145 : Guanylate kinase/L-type calcium channel beta subunit
IPR017665 : Guanylate kinase
IPR020590 : Guanylate kinase, conserved site
GO :
0004385 : Molecular Function : guanylate kinase activity
0005515 : Molecular Function : protein binding
0006163 : Biological Process : purine nucleotide metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 7, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000034666
(
BC009914
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,328,017 - 228,336,645 (8,629)
query : 1 - 1,056 (1,056/1,073)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
InterPro :
IPR008144 : Guanylate kinase-like
IPR008145 : Guanylate kinase/L-type calcium channel beta subunit
IPR017665 : Guanylate kinase
IPR020590 : Guanylate kinase, conserved site
GO :
0004385 : Molecular Function : guanylate kinase activity
0005515 : Molecular Function : protein binding
0006163 : Biological Process : purine nucleotide metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 7, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000348002 (
ENST00000366722
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,328,018 - 228,336,509 (8,492)
query : 1 - 850 (850/850)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 9.5, mito_pero 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000533087 (
ENST00000435153
)
(Guanylate kinase isoform c.)
genome : 228,328,019 - 228,336,510 (8,492)
query : 1 - 865 (865/865)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13.5, extr 8, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000601330 (
ENST00000498092
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,328,019 - 228,335,358 (7,340)
query : 1 - 865 (865/865)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15, nucl 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000263185
(
BC069001
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,328,031 - 228,336,645 (8,615)
query : 1 - 1,278 (1,278/1,295)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
InterPro :
IPR008144 : Guanylate kinase-like
IPR008145 : Guanylate kinase/L-type calcium channel beta subunit
IPR017665 : Guanylate kinase
IPR020590 : Guanylate kinase, conserved site
GO :
0004385 : Molecular Function : guanylate kinase activity
0005515 : Molecular Function : protein binding
0006163 : Biological Process : purine nucleotide metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 19, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000348001 (
ENST00000366721
)
(Guanylate kinase isoform a.)
genome : 228,328,033 - 228,336,453 (8,421)
query : 1 - 689 (689/689)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 5.5, cyto_nucl 5.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000589528 (
ENST00000485733
)
(Conserved hypothetical protein.)
genome : 228,328,824 - 228,334,584 (5,761)
query : 1 - 345 (345/345)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 8.5, cyto_nucl 8.5, E.R._mito 8.5,
mito_pero 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000595133 (
ENST00000491613
)
(Guanylate kinase isoform a.)
genome : 228,328,824 - 228,333,463 (4,640)
query : 1 - 959 (959/959)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 11.5, cyto_nucl 11, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000565163 (
ENST00000460224
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,328,833 - 228,335,411 (6,579)
query : 1 - 639 (639/639)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto_pero 4.5, cyto_nucl 4.16667, cyto 3.5,
pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000588779 (
ENST00000484953
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,328,897 - 228,333,767 (4,871)
query : 1 - 273 (273/273)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 5.5, cyto_nucl 5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000577292 (
ENST00000472939
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,328,950 - 228,335,146 (6,197)
query : 1 - 314 (314/314)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 11.5, nucl 9, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000510199 (
ENST00000412265
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,329,083 - 228,336,158 (7,076)
query : 1 - 1,012 (1,012/1,012)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 16, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000045571
(
AK125698
)
(Conserved hypothetical protein.)
genome : 228,331,496 - 228,334,251 (2,756)
query : 2 - 2,757 (2,756/2,757)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 11.5, extr 10, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000347998 (
ENST00000366718
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,332,029 - 228,336,652 (4,624)
query : 1 - 1,275 (1,275/1,275)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 7, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000561753 (
NM_001159391
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,332,404 - 228,336,656 (4,253)
query : 1 - 904 (904/904)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 7, cyto_nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000027898
(
AL832986
)
(Guanylate kinase/L-type calcium channel beta subunit domain containing protein.)
genome : 228,332,598 - 228,336,652 (4,055)
query : 26 - 2,576 (2,551/2,590)
4 exons
identity = 0.998
5'(0.998;1.000;1.000;0.997)3'
coverage = 0.990
InterPro :
IPR008144 : Guanylate kinase-like
IPR008145 : Guanylate kinase/L-type calcium channel beta subunit
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10, cyto_mito 10, mito 9.5, cyto 8.5,
cyto_pero 7.16667, nucl 7, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000574534 (
ENST00000470040
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,332,598 - 228,336,647 (4,050)
query : 1 - 2,549 (2,549/2,549)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12.5, extr 9, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000347996 (
ENST00000366716
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,333,155 - 228,336,685 (3,531)
query : 1 - 940 (940/940)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 7, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000220999
(
U66895
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,333,213 - 228,336,400 (3,188)
query : 6 - 602 (597/606)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.985
EC number :
EC 2.7.4.8
,
EC 2.7.4.9
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR008144 : Guanylate kinase-like
IPR008145 : Guanylate kinase/L-type calcium channel beta subunit
IPR017665 : Guanylate kinase
IPR020590 : Guanylate kinase, conserved site
GO :
0004385 : Molecular Function : guanylate kinase activity
0005515 : Molecular Function : protein binding
0006163 : Biological Process : purine nucleotide metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 7, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000582820 (
ENST00000478725
)
(Guanylate kinase isoform a.)
genome : 228,333,211 - 228,335,260 (2,050)
query : 1 - 414 (414/414)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto_nucl 6.66667, cyto_pero 5.33333, cyto 5,
nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000588989 (
ENST00000485168
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,333,211 - 228,335,188 (1,978)
query : 1 - 737 (737/737)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 14.5, nucl 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000589644 (
ENST00000485859
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,333,211 - 228,333,936 (726)
query : 1 - 325 (325/325)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 9.5, cyto_mito 8, cyto 5, cyto_nucl 5,
cyto_pero 4.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000193972
(
L76200
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,333,214 - 228,336,644 (3,431)
query : 1 - 839 (839/839)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
InterPro :
IPR008144 : Guanylate kinase-like
IPR008145 : Guanylate kinase/L-type calcium channel beta subunit
IPR017665 : Guanylate kinase
IPR020590 : Guanylate kinase, conserved site
GO :
0004385 : Molecular Function : guanylate kinase activity
0005515 : Molecular Function : protein binding
0006163 : Biological Process : purine nucleotide metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 7, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000267686
(
CR456836
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,333,214 - 228,336,394 (3,181)
query : 1 - 590 (590/594)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.993
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
InterPro :
IPR008144 : Guanylate kinase-like
IPR008145 : Guanylate kinase/L-type calcium channel beta subunit
IPR017665 : Guanylate kinase
IPR020590 : Guanylate kinase, conserved site
GO :
0004385 : Molecular Function : guanylate kinase activity
0005515 : Molecular Function : protein binding
0006163 : Biological Process : purine nucleotide metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 7, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000268875
(
CR542006
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,333,214 - 228,336,395 (3,182)
query : 1 - 591 (591/591)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
InterPro :
IPR008144 : Guanylate kinase-like
IPR008145 : Guanylate kinase/L-type calcium channel beta subunit
IPR017665 : Guanylate kinase
IPR020590 : Guanylate kinase, conserved site
GO :
0004385 : Molecular Function : guanylate kinase activity
0005515 : Molecular Function : protein binding
0006163 : Biological Process : purine nucleotide metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 7, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000599342 (
ENST00000495999
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,333,216 - 228,336,140 (2,925)
query : 1 - 555 (555/555)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 10, cyto_mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000086805
(
BC007369
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,333,259 - 228,336,645 (3,387)
query : 1 - 796 (796/828)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
InterPro :
IPR008144 : Guanylate kinase-like
IPR008145 : Guanylate kinase/L-type calcium channel beta subunit
IPR017665 : Guanylate kinase
IPR020590 : Guanylate kinase, conserved site
GO :
0004385 : Molecular Function : guanylate kinase activity
0005515 : Molecular Function : protein binding
0006163 : Biological Process : purine nucleotide metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 5.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000590410 (
ENST00000486668
)
(Guanylate kinase isoform c.)
genome : 228,333,262 - 228,336,651 (3,390)
query : 1 - 738 (738/738)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, extr 4, cyto 3.5, cyto_nucl 3.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000569581 (
ENST00000464858
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,333,584 - 228,336,425 (2,842)
query : 1 - 633 (633/633)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 4, pero 4, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000574643 (
ENST00000470155
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,333,730 - 228,336,656 (2,927)
query : 1 - 534 (534/534)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8.5, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000585316 (
ENST00000481341
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,334,527 - 228,335,400 (874)
query : 1 - 333 (333/333)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 6.5, cyto_nucl 6.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000601352 (
ENST00000498115
)
(Guanylate kinase isoform c.)
genome : 228,334,541 - 228,336,474 (1,934)
query : 1 - 796 (796/796)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cysk 10, nucl 5, cysk_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000569738 (
ENST00000465025
)
(Guanylate kinase; EC=2.7.4.8; GMP kinase;)
genome : 228,335,125 - 228,336,648 (1,524)
query : 1 - 783 (783/783)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.8333, nucl 10.5, extr 10, cyto 10,
cyto_pero 6.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000581362 (
ENST00000477206
)
(Guanylate kinase/L-type calcium channel beta subunit domain containing protein.)
genome : 228,335,167 - 228,336,634 (1,468)
query : 1 - 589 (589/589)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, extr 7, nucl 6, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000575710 (
ENST00000471270
)
(Guanylate kinase isoform c.)
genome : 228,335,792 - 228,336,656 (865)
query : 1 - 657 (657/657)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0001662
HIT000584094 (
ENST00000480056
)
(Guanylate kinase isoform c.)
genome : 228,335,819 - 228,336,656 (838)
query : 1 - 543 (543/543)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.4.8
KEGG pathway :
00230 : Purine metabolism (100)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001662)
HIX0200034
HIT000266282
(
BC089439
)
Representative transcript
(Gap junction gamma-2 protein; Connexin-46.6; Cx46.6; Connexin-47; Cx47; Gap junction alpha-12 protein;)
genome : 228,337,415 - 228,347,526 (10,112)
query : 1 - 2,380 (2,380/2,440)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000500 : Connexin
IPR013092 : Connexin, N-terminal
IPR017990 : Connexin, conserved site
IPR019570 : Gap junction protein, cysteine-rich domain
GO :
0005922 : Cellular Component : connexon complex
0007154 : Biological Process : cell communication
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200034)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK046609
Bos
sp. (Cow) : BC114129
Canis
sp. (Dog) : ENSCAFT00000001810
Macaca
sp. (Macaque) : ENSMMUT00000032481
Pongo
sp. (Orangutan) : ENSPPYT00000000155
Tetraodon
sp. (Tetraodon) : GSTENT00001153001
Takifugu
sp. (Fugu) : SINFRUT00000181558
Rattus
sp. (Rat) : XM_001076914
Pan
sp. (Chimpanzee) : XM_001145449
Monodelphis
sp. (Opossum) : XM_001376792
HIX0200034
HIT000207935 (
NM_020435
)
(Gap junction gamma-2 protein; Connexin-46.6; Cx46.6; Connexin-47; Cx47; Gap junction alpha-12 protein;)
genome : 228,337,415 - 228,347,526 (10,112)
query : 1 - 2,380 (2,380/2,411)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200034)
HIX0200034
HIT000347994 (
ENST00000366714
)
(Gap junction gamma-2 protein; Connexin-46.6; Cx46.6; Connexin-47; Cx47; Gap junction alpha-12 protein;)
genome : 228,337,553 - 228,347,527 (9,975)
query : 1 - 2,243 (2,243/2,243)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200034)
HIX0200034
HIT000557779
(
EU433401
)
(Non-protein coding transcript.)
genome : 228,337,631 - 228,345,487 (7,857)
query : 1 - 125 (125/125)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200034)
HIX0200034
HIT000094119
(
BC035840
)
(Gap junction gamma-2 protein; Connexin-46.6; Cx46.6; Connexin-47; Cx47; Gap junction alpha-12 protein;)
genome : 228,337,661 - 228,346,354 (8,694)
query : 1 - 962 (962/962)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000500 : Connexin
IPR013092 : Connexin, N-terminal
IPR017990 : Connexin, conserved site
IPR019570 : Gap junction protein, cysteine-rich domain
GO :
0005922 : Cellular Component : connexon complex
0007154 : Biological Process : cell communication
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200034)
HIX0200034
HIT000085752
(
AY285161
)
(Gap junction gamma-2 protein; Connexin-46.6; Cx46.6; Connexin-47; Cx47; Gap junction alpha-12 protein;)
genome : 228,345,469 - 228,346,779 (1,311)
query : 1 - 1,311 (1,311/1,311)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000500 : Connexin
IPR013092 : Connexin, N-terminal
IPR017990 : Connexin, conserved site
IPR019570 : Gap junction protein, cysteine-rich domain
GO :
0005922 : Cellular Component : connexon complex
0007154 : Biological Process : cell communication
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200034)
HIX0056815
HIT000347993 (
ENST00000366713
)
(Conserved hypothetical protein.)
genome : 228,351,787 - 228,353,213 (1,427)
query : 1 - 446 (446/446)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 11, cyto_nucl 4.83333, nucl 4.5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056815)
HIX0056815
HIT000599866 (
ENST00000496552
)
(Conserved hypothetical protein.)
genome : 228,351,795 - 228,352,549 (755)
query : 1 - 594 (594/594)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 11, cyto_nucl 4.83333, nucl 4.5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056815)
HIX0199822
HIT000316719 (
NM_001010867
)
(Putative transferase CAF17, mitochondrial; EC=2.1.-.-; Iron-sulfur cluster assembly factor homolog; Precursor;)
genome : 228,353,429 - 228,369,958 (16,530)
query : 1 - 7,904 (7,904/7,921)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29.5, cyto_mito 16
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199822)
HIX0199822
HIT000091465
(
BC028052
)
(Putative transferase CAF17, mitochondrial; EC=2.1.-.-; Iron-sulfur cluster assembly factor homolog; Precursor;)
genome : 228,353,511 - 228,353,766 (256)
query : 7 - 261 (255/261)
1 exon
identity = 0.992
5'(0.992)3'
coverage = 0.977
EC number :
EC 2.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 13, cyto 6.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199822)
HIX0199822
HIT000347991 (
ENST00000366711
)
(Putative transferase CAF17, mitochondrial; EC=2.1.-.-; Iron-sulfur cluster assembly factor homolog; Precursor;)
genome : 228,353,516 - 228,369,958 (16,443)
query : 1 - 7,817 (7,817/7,817)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29.5, cyto_mito 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199822)
HIX0199822
HIT000006070
(
AK022796
)
Representative transcript
(Putative transferase CAF17 homolog, mitochondrial; EC=2.1.-.-; Iron-sulfur cluster assembly factor homolog; Precursor;)
genome : 228,358,879 - 228,364,082 (5,204)
query : 39 - 3,975 (3,937/3,975)
3 exons
identity = 0.997
5'(0.995;1.000;0.998)3'
coverage = 0.990
EC number :
EC 2.1.-.-
InterPro :
IPR013977 : Glycine cleavage T-protein, C-terminal barrel domain
IPR017703 : YgfZ/GcvT conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 13, cyto 12, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199822)
HIX0199822
HIT000588585 (
ENST00000484749
)
(Putative transferase CAF17, mitochondrial; EC=2.1.-.-; Iron-sulfur cluster assembly factor homolog; Precursor;)
genome : 228,358,879 - 228,369,958 (11,080)
query : 1 - 9,815 (9,815/9,815)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, nucl 10, extr 9, cyto 8, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199822)
HIX0199822
HIT000498461
(
AK303837
)
(Putative transferase CAF17, mitochondrial; EC=2.1.-.-; Iron-sulfur cluster assembly factor homolog; Precursor;)
genome : 228,362,251 - 228,363,276 (1,026)
query : 1 - 853 (853/853)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.-.-
InterPro :
IPR013977 : Glycine cleavage T-protein, C-terminal barrel domain
IPR017703 : YgfZ/GcvT conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, mito 11, cyto_nucl 8.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199822)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ719942
Mus
sp. (Mouse) : AK133203
Danio
sp. (Zebrafish) : BC124381
Tetraodon
sp. (Tetraodon) : CR688139
Oryzias
sp. (Medaka) : ENSORLT00000022032
Pongo
sp. (Orangutan) : ENSPPYT00000000153
Takifugu
sp. (Fugu) : SINFRUT00000144305
Monodelphis
sp. (Opossum) : XM_001376822
Equus
sp. (Horse) : XM_001918291
Rattus
sp. (Rat) : XM_344643
Pan
sp. (Chimpanzee) : XM_514253
Canis
sp. (Dog) : XM_539326
Bos
sp. (Cow) : XM_582394
HIX0199822
HIT000645168 (
ENST00000546123
)
(Putative transferase CAF17, mitochondrial; EC=2.1.-.-; Iron-sulfur cluster assembly factor homolog; Precursor;)
genome : 228,362,251 - 228,363,276 (1,026)
query : 1 - 853 (853/853)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, mito 11, cyto_nucl 9, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199822)
HIX0199822
HIT000465550
(
DQ599019
)
(Non-protein coding transcript.)
genome : 228,365,937 - 228,365,966 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199822)
HIX0001664
HIT000091406
(
BC027909
)
(Protein of unknown function DUF4608 family protein.)
genome : 228,391,207 - 228,401,356 (10,150)
query : 1 - 884 (884/981)
2 exons
identity = 0.999
3'(0.998;1.000)5'
coverage = 1.000
InterPro :
IPR029408 : Protein of unknown function DUF4608
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 9, cyto_pero 2.5, nucl 2, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001664)
HIX0001664
HIT000727509 (
NR_073155
)
(Protein of unknown function DUF4608 family protein.)
genome : 228,391,207 - 228,401,356 (10,150)
query : 1 - 884 (884/981)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 9, cyto_pero 2.5, nucl 2, cyto 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001664)
HIX0001664
HIT000114033 (
ENST00000295012
)
(Protein of unknown function DUF4608 family protein.)
genome : 228,391,207 - 228,401,361 (10,155)
query : 1 - 889 (889/889)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 9, cyto_pero 2.5, nucl 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001664)
HIX0001664
HIT000576982 (
ENST00000472613
)
(Protein of unknown function DUF4608 family protein.)
genome : 228,391,686 - 228,401,347 (9,662)
query : 1 - 624 (624/624)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, nucl 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001664)
HIX0001664
HIT000130458 (
ENST00000337335
)
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,392,167 - 228,401,365 (9,199)
query : 1 - 2,893 (2,893/2,893)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 9, cyto_pero 2.5, nucl 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001664)
HIX0001664
HIT000013170
(
AK056556
)
Representative transcript
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,392,176 - 228,401,365 (9,190)
query : 1 - 2,884 (2,884/2,884)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR029408 : Protein of unknown function DUF4608
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 9, cyto_pero 2.5, nucl 2, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001664)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000032484
Pan
sp. (Chimpanzee) : ENSPTRT00000003795
HIX0001664
HIT000727508 (
NR_073154
)
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,392,176 - 228,401,365 (9,190)
query : 1 - 2,884 (2,884/2,884)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 9, cyto_pero 2.5, nucl 2, cyto 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001664)
HIX0001666
HIT000485259_03 (
NM_001098623
)
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,395,831 - 228,566,575 (170,745)
query : 1 - 24,060 (24,060/24,060)
105 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11, nucl 7.5, plas 3.5,
extr_plas 3, mito_pero 3, mito 2.5, pero 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000112501_03 (
ENST00000284548
)
(Obscurin isoform a.)
genome : 228,395,831 - 228,548,951 (153,121)
query : 1 - 20,432 (20,432/20,432)
81 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14, cyto 7, mito 2.5, extr 2,
pero 2, E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000317707_03 (
NM_052843
)
(Obscurin isoform a.)
genome : 228,395,831 - 228,548,951 (153,121)
query : 1 - 20,432 (20,432/20,432)
81 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14, cyto 7, mito 2.5, extr 2,
pero 2, E.R._mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000597391 (
ENST00000493977
)
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,403,390 - 228,405,119 (1,730)
query : 1 - 723 (723/732)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 15, extr 9, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000007460
(
AK024186
)
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,455,336 - 228,457,822 (2,487)
query : 1 - 2,488 (2,488/2,488)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR013098 : Immunoglobulin I-set
IPR020682 : Obscurin-myosin light chain kinase
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, extr 10, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000335763
(
BC098118
)
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,455,774 - 228,457,361 (1,588)
query : 1 - 1,588 (1,588/1,588)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR013098 : Immunoglobulin I-set
IPR020682 : Obscurin-myosin light chain kinase
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, extr 10, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000335839
(
BC098262
)
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,455,774 - 228,457,361 (1,588)
query : 1 - 1,588 (1,588/1,588)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR013098 : Immunoglobulin I-set
IPR020682 : Obscurin-myosin light chain kinase
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, extr 10, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000335869
(
BC098292
)
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,455,774 - 228,457,361 (1,588)
query : 1 - 1,588 (1,588/1,588)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR013098 : Immunoglobulin I-set
IPR020682 : Obscurin-myosin light chain kinase
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, extr 10, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000336111
(
BC099731
)
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,455,774 - 228,457,361 (1,588)
query : 1 - 1,588 (1,588/1,588)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR013098 : Immunoglobulin I-set
IPR020682 : Obscurin-myosin light chain kinase
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, extr 10, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000340667
(
BC114382
)
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,455,774 - 228,457,361 (1,588)
query : 1 - 1,588 (1,588/1,588)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR013098 : Immunoglobulin I-set
IPR020682 : Obscurin-myosin light chain kinase
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, extr 10, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000340688
(
BC114461
)
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,455,774 - 228,457,361 (1,588)
query : 1 - 1,587 (1,587/1,587)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR013098 : Immunoglobulin I-set
IPR020682 : Obscurin-myosin light chain kinase
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, extr 11, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000048320
(
AK128447
)
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,458,144 - 228,462,098 (3,955)
query : 1 - 3,956 (3,956/3,956)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR013098 : Immunoglobulin I-set
IPR020682 : Obscurin-myosin light chain kinase
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 7, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000000151
Pan
sp. (Chimpanzee) : ENSPTRT00000058120
HIX0001666
HIT000714250 (
ENST00000602517
)
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,458,144 - 228,462,098 (3,955)
query : 1 - 3,955 (3,955/3,955)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 4, nucl 2, cyto_mito 2, cyto_pero 2,
cyto_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0160154
HIT000488643
(
AK294019
)
Representative transcript
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,462,285 - 228,463,767 (1,483)
query : 1 - 1,483 (1,483/1,483)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 6, nucl 3, cyto_plas 3, cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160154)
HIX0160154
HIT000714262 (
ENST00000602529
)
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,462,285 - 228,463,767 (1,483)
query : 1 - 1,483 (1,483/1,483)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 6, nucl 3, cyto_plas 3, cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160154)
HIX0160154
HIT000714680 (
ENST00000602947
)
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,462,570 - 228,463,747 (1,178)
query : 1 - 550 (550/550)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 9.5, cyto_nucl 7.33333,
cyto_pero 7.16667, extr 4, pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160154)
HIX0001666
HIT000347986 (
ENST00000366706
)
(Obscurin isoform IC.)
genome : 228,464,879 - 228,471,905 (7,027)
query : 1 - 2,983 (2,983/2,983)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 8, extr 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000097812
(
BC043916
)
(Obscurin isoform IC.)
genome : 228,465,341 - 228,471,894 (6,554)
query : 1 - 2,701 (2,701/2,761)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR013098 : Immunoglobulin I-set
IPR020682 : Obscurin-myosin light chain kinase
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14, nucl 11.5, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000022343
(
AK097489
)
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,467,909 - 228,472,692 (4,784)
query : 1 - 2,534 (2,534/2,534)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;0.996;0.999)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR013098 : Immunoglobulin I-set
IPR020682 : Obscurin-myosin light chain kinase
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 16, nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000347984 (
ENST00000366704
)
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,467,909 - 228,472,692 (4,784)
query : 1 - 2,534 (2,534/2,534)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 16, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000001271
(
AB046776
)
(Obscurin isoform IC.)
genome : 228,468,474 - 228,492,160 (23,687)
query : 1 - 4,699 (4,699/4,789)
19 exons
identity = 0.999
5'(1.000;1.000;1.000;0.996;1.000;1.000;1.000;
1.000;1.000;1.000;0.996;1.000;0.996;1.000;
1.000;1.000;1.000;1.000;0.994)3'
coverage = 0.981
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, cyto_mito 12.1667, cyto 9.5,
cyto_nucl 9.33333, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000587423 (
ENST00000483539
)
(Obscurin isoform IC.)
genome : 228,468,474 - 228,492,160 (23,687)
query : 1 - 4,699 (4,699/4,699)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, cyto_mito 11.6667, cyto_nucl 9.33333,
cyto 8.5, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000598224 (
ENST00000494839
)
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,481,896 - 228,482,842 (947)
query : 1 - 583 (583/583)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0214348
HIT000714511 (
ENST00000602778
)
(Conserved hypothetical protein.)
genome : 228,483,612 - 228,490,699 (7,088)
query : 1 - 764 (764/764)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, extr 10, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214348)
HIX0001666
HIT000024249
(
AL080128
)
(Obscurin isoform IC.)
genome : 228,487,517 - 228,489,783 (2,267)
query : 2 - 2,268 (2,267/2,295)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR013098 : Immunoglobulin I-set
IPR020682 : Obscurin-myosin light chain kinase
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 8, mito 4, cyto_pero 4, cyto_plas 4,
cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000714418 (
ENST00000602685
)
(Obscurin isoform IC.)
genome : 228,487,517 - 228,489,783 (2,267)
query : 1 - 2,267 (2,267/2,267)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 8, mito 4, cyto_pero 4, cyto_plas 4,
cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000714565 (
ENST00000602832
)
(Obscurin isoform IC.)
genome : 228,491,310 - 228,492,045 (736)
query : 1 - 372 (372/372)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, cyto 4, nucl 3, mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000027269
(
AL832357
)
(Obscurin isoform a.)
genome : 228,511,166 - 228,548,951 (37,786)
query : 1 - 4,848 (4,848/4,901)
26 exons
identity = 0.999
5'(1.000;0.987;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.993;1.000;1.000;0.994;
1.000;1.000;0.988;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000219 : Dbl homology (DH) domain
IPR001452 : SH3 domain
IPR001849 : Pleckstrin homology domain
IPR003598 : Immunoglobulin subtype 2
IPR013098 : Immunoglobulin I-set
IPR020682 : Obscurin-myosin light chain kinase
GO :
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0005515 : Molecular Function : protein binding
0035023 : Biological Process : regulation of Rho protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 19.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000001354
(
AB046859
)
Representative transcript
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,522,583 - 228,566,575 (43,993)
query : 1 - 7,835 (7,835/7,835)
45 exons
identity = 0.999
5'(0.969;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.999;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 12.5, cyto 12.5, pero 2.5, plas 2,
E.R. 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000539040 (
ENST00000441106
)
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,522,583 - 228,566,575 (43,993)
query : 1 - 7,829 (7,829/7,829)
45 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 12.5, cyto 12.5, plas 3, pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000331658
(
AM231061
)
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,529,820 - 228,566,496 (36,677)
query : 11 - 5,883 (5,873/5,883)
31 exons
identity = 0.999
5'(0.991;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.974;
1.000;1.000;1.000;0.957;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.998
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR008266 : Tyrosine-protein kinase, active site
IPR008271 : Serine/threonine-protein kinase, active site
IPR013098 : Immunoglobulin I-set
IPR020682 : Obscurin-myosin light chain kinase
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, plas 4, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000436186
(
DQ400343
)
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,529,820 - 228,566,496 (36,677)
query : 11 - 5,883 (5,873/5,883)
31 exons
identity = 0.999
5'(0.991;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.974;
1.000;1.000;1.000;0.957;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.998
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR008266 : Tyrosine-protein kinase, active site
IPR008271 : Serine/threonine-protein kinase, active site
IPR013098 : Immunoglobulin I-set
IPR020682 : Obscurin-myosin light chain kinase
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, plas 4, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000028636
(
AL833724
)
(Obscurin isoform a.)
genome : 228,540,735 - 228,548,951 (8,217)
query : 1 - 1,877 (1,877/1,896)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000578533 (
ENST00000474237
)
(Obscurin isoform a.)
genome : 228,540,735 - 228,548,951 (8,217)
query : 1 - 1,877 (1,877/1,877)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0001666
HIT000093545
(
BC034746
)
(Obscurin isoform a.)
genome : 228,547,506 - 228,548,951 (1,446)
query : 1 - 1,446 (1,446/1,475)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 13.5, cyto 12.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001666)
HIX0214340
HIT000714078 (
ENST00000602345
)
(Hypothetical short protein.)
genome : 228,571,815 - 228,572,717 (903)
query : 1 - 574 (574/574)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto_nucl 6.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214340)
HIX0019053
HIT000263381
(
BC069227
)
(E3 ubiquitin-protein ligase TRIM11; EC=6.3.2.-; Protein BIA1; RING finger protein 92; Tripartite motif-containing protein 11;)
genome : 228,581,378 - 228,594,508 (13,131)
query : 1 - 2,681 (2,681/2,725)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.980;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR000315 : Zinc finger, B-box
IPR001870 : B30.2/SPRY domain
IPR003877 : SPRY domain
IPR003879 : Butyrophylin-like
IPR006574 : SPRY-associated
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019053)
HIX0019053
HIT000035340
(
BC011629
)
(E3 ubiquitin-protein ligase TRIM11; EC=6.3.2.-; Protein BIA1; RING finger protein 92; Tripartite motif-containing protein 11;)
genome : 228,581,378 - 228,588,727 (7,350)
query : 20 - 1,782 (1,763/1,812)
4 exons
identity = 0.999
3'(1.000;1.000;1.000;0.984)5'
coverage = 0.989
EC number :
EC 6.3.2.-
InterPro :
IPR001870 : B30.2/SPRY domain
IPR003877 : SPRY domain
IPR003879 : Butyrophylin-like
IPR006574 : SPRY-associated
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 15, cyto 11, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019053)
HIX0019053
HIT000077519
(
AF327056
)
Representative transcript
(E3 ubiquitin-protein ligase TRIM11; EC=6.3.2.-; Protein BIA1; RING finger protein 92; Tripartite motif-containing protein 11;)
genome : 228,581,378 - 228,594,517 (13,140)
query : 1 - 2,689 (2,689/2,714)
6 exons
identity = 0.998
3'(0.999;1.000;1.000;1.000;0.980;0.997)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR000315 : Zinc finger, B-box
IPR001870 : B30.2/SPRY domain
IPR003877 : SPRY domain
IPR003879 : Butyrophylin-like
IPR006574 : SPRY-associated
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019053)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC020102
Bos
sp. (Cow) : BC126548
Canis
sp. (Dog) : ENSCAFT00000001778
Monodelphis
sp. (Opossum) : ENSMODT00000032098
Oryzias
sp. (Medaka) : ENSORLT00000012663
Pongo
sp. (Orangutan) : ENSPPYT00000000149
Tetraodon
sp. (Tetraodon) : GSTENT00019768001
Gallus
sp. (Chicken) : NM_001099359
Takifugu
sp. (Fugu) : SINFRUT00000143608
Macaca
sp. (Macaque) : XM_001082465
Equus
sp. (Horse) : XM_001495042
Danio
sp. (Zebrafish) : XM_001921540
Rattus
sp. (Rat) : XM_340806
Pan
sp. (Chimpanzee) : XM_514256
Canis
sp. (Dog) : XM_546226
HIX0019053
HIT000213136 (
NM_145214
)
(E3 ubiquitin-protein ligase TRIM11; EC=6.3.2.-; Protein BIA1; RING finger protein 92; Tripartite motif-containing protein 11;)
genome : 228,581,378 - 228,594,517 (13,140)
query : 1 - 2,690 (2,690/2,715)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.980;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019053)
HIX0019053
HIT000074331
(
AF220125
)
(E3 ubiquitin-protein ligase TRIM11; EC=6.3.2.-; Tripartite motif-containing protein 11;)
genome : 228,581,378 - 228,582,633 (1,256)
query : 1 - 1,255 (1,255/1,280)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11.6667, cyto 7.5, extr 6,
cyto_pero 5.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019053)
HIX0019053
HIT000250474
(
AL360165
)
(E3 ubiquitin-protein ligase TRIM11; EC=6.3.2.-; Protein BIA1; RING finger protein 92; Tripartite motif-containing protein 11;)
genome : 228,581,378 - 228,582,598 (1,221)
query : 1 - 1,221 (1,221/1,246)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR001870 : B30.2/SPRY domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 11, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019053)
HIX0019053
HIT000385249
(
AK226119
)
(SPRY-associated domain containing protein.)
genome : 228,581,374 - 228,593,605 (12,232)
query : 1 - 5,774 (5,774/5,774)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;0.996;0.999)5'
coverage = 1.000
InterPro :
IPR001870 : B30.2/SPRY domain
IPR003877 : SPRY domain
IPR003879 : Butyrophylin-like
IPR006574 : SPRY-associated
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, mito 12, cyto_nucl 11.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019053)
HIX0019053
HIT000596486 (
ENST00000493030
)
(SPRY-associated domain containing protein.)
genome : 228,581,374 - 228,593,605 (12,232)
query : 1 - 5,774 (5,774/5,774)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, mito 12, cyto_nucl 11.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019053)
HIX0019053
HIT000112502 (
ENST00000284551
)
(E3 ubiquitin-protein ligase TRIM11; EC=6.3.2.-; Protein BIA1; RING finger protein 92; Tripartite motif-containing protein 11;)
genome : 228,581,377 - 228,594,541 (13,165)
query : 1 - 2,715 (2,715/2,715)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.980;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019053)
HIX0019053
HIT000022679
(
AK097825
)
(SPRY-associated domain containing protein.)
genome : 228,581,379 - 228,594,046 (12,668)
query : 1 - 2,218 (2,218/2,218)
6 exons
identity = 0.998
3'(0.999;1.000;1.000;0.996;0.980;1.000)5'
coverage = 1.000
InterPro :
IPR001870 : B30.2/SPRY domain
IPR003877 : SPRY domain
IPR003879 : Butyrophylin-like
IPR006574 : SPRY-associated
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 13, mito 9, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019053)
HIX0214352
HIT000714696 (
ENST00000602963
)
(Conserved hypothetical protein.)
genome : 228,581,991 - 228,584,668 (2,678)
query : 1 - 480 (480/480)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214352)
HIX0019053
HIT000565569 (
ENST00000460651
)
(E3 ubiquitin-protein ligase TRIM11; EC=6.3.2.-; Protein BIA1; RING finger protein 92; Tripartite motif-containing protein 11;)
genome : 228,582,157 - 228,589,799 (7,643)
query : 1 - 1,188 (1,188/1,188)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 10.8333, nucl 9, cyto 8.5,
cyto_pero 5.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019053)
HIX0019053
HIT000496483
(
AK301859
)
(E3 ubiquitin-protein ligase TRIM11; EC=6.3.2.-; Protein BIA1; RING finger protein 92; Tripartite motif-containing protein 11;)
genome : 228,582,174 - 228,593,976 (11,803)
query : 1 - 1,350 (1,350/1,350)
6 exons
identity = 0.996
3'(1.000;1.000;1.000;0.996;0.960;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR000315 : Zinc finger, B-box
IPR001870 : B30.2/SPRY domain
IPR003877 : SPRY domain
IPR003879 : Butyrophylin-like
IPR006574 : SPRY-associated
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 11.5, cyto 11, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019053)
HIX0019053
HIT000433405
(
AK314539
)
(SPRY-associated domain containing protein.)
genome : 228,582,406 - 228,594,499 (12,094)
query : 1 - 1,645 (1,645/1,645)
6 exons
identity = 0.998
3'(1.000;0.990;1.000;1.000;0.980;0.998)5'
coverage = 1.000
InterPro :
IPR001870 : B30.2/SPRY domain
IPR003877 : SPRY domain
IPR003879 : Butyrophylin-like
IPR006574 : SPRY-associated
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, nucl 11.5, cyto_nucl 11.3333,
cyto_mito 10.8333, cyto 5.5, cyto_pero 4.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019053)
HIX0019053
HIT000714315 (
ENST00000602582
)
(E3 ubiquitin-protein ligase TRIM11; EC=6.3.2.-; Tripartite motif-containing protein 11;)
genome : 228,582,526 - 228,593,888 (11,363)
query : 1 - 682 (682/682)
4 exons
identity = 0.980
3'(1.000;1.000;0.887;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14.5, nucl 7.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019053)
HIX0019053
HIT000580001 (
ENST00000475775
)
(Conserved hypothetical protein.)
genome : 228,582,909 - 228,585,390 (2,482)
query : 1 - 693 (693/693)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019053)
HIX0019053
HIT000081658
(
AK074623
)
(Conserved hypothetical protein.)
genome : 228,583,235 - 228,623,977 (40,743)
query : 17 - 3,096 (3,080/3,096)
2 exons
identity = 0.983
3'(0.996;0.787)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 12.5, extr 12, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019053)
HIX0019053
HIT000081901
(
AK074866
)
(Conserved hypothetical protein.)
genome : 228,583,235 - 228,594,501 (11,267)
query : 15 - 2,525 (2,511/2,525)
5 exons
identity = 0.998
3'(0.999;1.000;1.000;0.980;1.000)5'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.3333, nucl 12, cyto_mito 10.1667, mito 9,
cyto 8, cyto_pero 6.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019053)
HIX0019053
HIT000347979 (
ENST00000366699
)
(Conserved hypothetical protein.)
genome : 228,583,235 - 228,594,501 (11,267)
query : 1 - 2,511 (2,511/2,511)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;0.980;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.3333, nucl 12, cyto_mito 10.1667, mito 9,
cyto 8, cyto_pero 6.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019053)
HIX0019053
HIT000714041 (
ENST00000602308
)
(E3 ubiquitin-protein ligase TRIM11; EC=6.3.2.-; Tripartite motif-containing protein 11;)
genome : 228,584,314 - 228,593,887 (9,574)
query : 1 - 586 (586/586)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 7.83333, cyto 6, nucl 4.5,
cyto_pero 4.16667, mito_nucl 4.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019053)
HIX0019053
HIT000437712
(
DQ571181
)
(Non-protein coding transcript.)
genome : 228,589,790 - 228,589,819 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019053)
HIX0160940
HIT000534713 (
ENST00000436779
)
(Hypothetical short protein.)
genome : 228,595,082 - 228,597,395 (2,314)
query : 1 - 283 (283/283)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, mito 11, cyto_nucl 9.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160940)
HIX0001669
HIT000205869 (
NM_016102
)
(E3 ubiquitin-protein ligase TRIM17; EC=6.3.2.-; RING finger protein 16; Testis RING finger protein; Tripartite motif-containing protein 17;)
genome : 228,595,636 - 228,604,583 (8,948)
query : 1 - 2,085 (2,085/2,085)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001669)
HIX0001669
HIT000365758 (
NM_001024940
)
(E3 ubiquitin-protein ligase TRIM17; EC=6.3.2.-; RING finger protein 16; Testis RING finger protein; Tripartite motif-containing protein 17;)
genome : 228,595,636 - 228,604,583 (8,948)
query : 1 - 2,049 (2,049/2,049)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001669)
HIX0001669
HIT000012040
(
AK055426
)
(E3 ubiquitin-protein ligase TRIM17; EC=6.3.2.-; RING finger protein 16; Testis RING finger protein; Tripartite motif-containing protein 17;)
genome : 228,595,641 - 228,603,730 (8,090)
query : 1 - 2,648 (2,648/2,648)
6 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR000315 : Zinc finger, B-box
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001669)
HIX0001669
HIT000347977 (
ENST00000366697
)
(E3 ubiquitin-protein ligase TRIM17; EC=6.3.2.-; RING finger protein 16; Testis RING finger protein; Tripartite motif-containing protein 17;)
genome : 228,595,641 - 228,603,730 (8,090)
query : 1 - 2,652 (2,652/2,652)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001669)
HIX0001669
HIT000041954
(
BC033788
)
Representative transcript
(E3 ubiquitin-protein ligase TRIM17; EC=6.3.2.-; RING finger protein 16; Testis RING finger protein; Tripartite motif-containing protein 17;)
genome : 228,595,739 - 228,604,347 (8,609)
query : 1 - 1,746 (1,746/1,814)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR000315 : Zinc finger, B-box
IPR001870 : B30.2/SPRY domain
IPR003877 : SPRY domain
IPR003879 : Butyrophylin-like
IPR006574 : SPRY-associated
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001669)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK083155
Rattus
sp. (Rat) : BC090320
Bos
sp. (Cow) : BC126548
Danio
sp. (Zebrafish) : ENSDART00000080247
Oryzias
sp. (Medaka) : ENSORLT00000011287
Pongo
sp. (Orangutan) : ENSPPYT00000000148
Tetraodon
sp. (Tetraodon) : GSTENT00026341001
Takifugu
sp. (Fugu) : SINFRUT00000175023
Macaca
sp. (Macaque) : XM_001082731
Monodelphis
sp. (Opossum) : XM_001381279
Equus
sp. (Horse) : XM_001495042
Pan
sp. (Chimpanzee) : XM_514257
HIX0001669
HIT000050871
(
BC023999
)
(E3 ubiquitin-protein ligase TRIM17; EC=6.3.2.-; RING finger protein 16; Testis RING finger protein; Tripartite motif-containing protein 17;)
genome : 228,595,739 - 228,604,346 (8,608)
query : 5 - 1,712 (1,708/1,727)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;0.991)5'
coverage = 0.998
EC number :
EC 6.3.2.-
InterPro :
IPR000315 : Zinc finger, B-box
IPR001870 : B30.2/SPRY domain
IPR003877 : SPRY domain
IPR003879 : Butyrophylin-like
IPR006574 : SPRY-associated
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001669)
HIX0001669
HIT000114039 (
ENST00000295033
)
(E3 ubiquitin-protein ligase TRIM17; EC=6.3.2.-; RING finger protein 16; Testis RING finger protein; Tripartite motif-containing protein 17;)
genome : 228,595,737 - 228,604,365 (8,629)
query : 1 - 1,730 (1,730/1,730)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001669)
HIX0001669
HIT000347978 (
ENST00000366698
)
(E3 ubiquitin-protein ligase TRIM17; EC=6.3.2.-; RING finger protein 16; Testis RING finger protein; Tripartite motif-containing protein 17;)
genome : 228,595,737 - 228,604,347 (8,611)
query : 1 - 1,748 (1,748/1,748)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001669)
HIX0001669
HIT000071966
(
AF156271
)
(E3 ubiquitin-protein ligase TRIM17; EC=6.3.2.-; RING finger protein 16; Testis RING finger protein; Tripartite motif-containing protein 17;)
genome : 228,595,740 - 228,604,306 (8,567)
query : 1 - 1,704 (1,704/1,704)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR000315 : Zinc finger, B-box
IPR001870 : B30.2/SPRY domain
IPR003877 : SPRY domain
IPR003879 : Butyrophylin-like
IPR006574 : SPRY-associated
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001669)
HIX0001669
HIT000427640
(
AK308774
)
(E3 ubiquitin-protein ligase TRIM17 isoform 3.)
genome : 228,596,401 - 228,604,458 (8,058)
query : 1 - 1,731 (1,731/1,731)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000315 : Zinc finger, B-box
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001669)
HIX0001669
HIT000554880 (
ENST00000456946
)
(E3 ubiquitin-protein ligase TRIM17 isoform 3.)
genome : 228,596,401 - 228,604,458 (8,058)
query : 1 - 1,731 (1,731/1,731)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001669)
HIX0001669
HIT000559996 (
NM_001134855
)
(E3 ubiquitin-protein ligase TRIM17 isoform 3.)
genome : 228,596,475 - 228,604,583 (8,109)
query : 1 - 1,782 (1,782/1,782)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001669)
HIX0001669
HIT000495729
(
AK301105
)
(E3 ubiquitin-protein ligase TRIM17 isoform 3.)
genome : 228,596,475 - 228,604,387 (7,913)
query : 1 - 1,586 (1,586/1,586)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000315 : Zinc finger, B-box
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001669)
HIX0001669
HIT000499992
(
AK316379
)
(E3 ubiquitin-protein ligase TRIM17 isoform 3.)
genome : 228,596,631 - 228,604,334 (7,704)
query : 1 - 1,264 (1,264/1,264)
6 exons
identity = 0.998
3'(0.997;0.926;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000315 : Zinc finger, B-box
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001669)
HIX0001669
HIT000583845 (
ENST00000479800
)
(E3 ubiquitin-protein ligase TRIM17; EC=6.3.2.-; RING finger protein 16; Testis RING finger protein; Tripartite motif-containing protein 17;)
genome : 228,596,873 - 228,604,354 (7,482)
query : 1 - 925 (925/925)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001669)
HIX0001669
HIT000309709 (
ENST00000355586
)
(E3 ubiquitin-protein ligase TRIM17; EC=6.3.2.-; RING finger protein 16; Testis RING finger protein; Tripartite motif-containing protein 17;)
genome : 228,601,497 - 228,604,328 (2,832)
query : 1 - 808 (808/808)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001669)
HIX0001669
HIT000555279 (
ENST00000457345
)
(Non-protein coding transcript.)
genome : 228,602,601 - 228,604,562 (1,962)
query : 1 - 575 (575/575)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001669)
HIX0001669
HIT000619605 (
ENST00000520264
)
(Non-protein coding transcript.)
genome : 228,602,622 - 228,604,353 (1,732)
query : 1 - 551 (551/551)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001669)
HIX0028778
HIT000337181
(
BC101837
)
Representative transcript
(Histone H3.1t; H3/t; H3t; H3/g;)
genome : 228,612,539 - 228,613,074 (536)
query : 1 - 536 (536/536)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR000164 : Histone H3/CENP-A
IPR007125 : Histone core
IPR009072 : Histone-fold
GO :
0000786 : Cellular Component : nucleosome
0003677 : Molecular Function : DNA binding
0006334 : Biological Process : nucleosome assembly
0046982 : Molecular Function : protein heterodimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028778)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : BC090320
Danio
sp. (Zebrafish) : BC153403
Equus
sp. (Horse) : ENSECAT00000006172
Gallus
sp. (Chicken) : ENSGALT00000019209
Mus
sp. (Mouse) : ENSMUST00000116301
Oryzias
sp. (Medaka) : ENSORLT00000001654
Pongo
sp. (Orangutan) : ENSPPYT00000000147
Tetraodon
sp. (Tetraodon) : GSTENT00016633001
Macaca
sp. (Macaque) : XM_001082339
HIX0028778
HIT000337183
(
BC101839
)
(Histone H3.1t; H3/t; H3t; H3/g;)
genome : 228,612,539 - 228,613,074 (536)
query : 1 - 536 (536/536)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR000164 : Histone H3/CENP-A
IPR007125 : Histone core
IPR009072 : Histone-fold
GO :
0000786 : Cellular Component : nucleosome
0003677 : Molecular Function : DNA binding
0006334 : Biological Process : nucleosome assembly
0046982 : Molecular Function : protein heterodimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028778)
HIX0028778
HIT000263251
(
BC069079
)
(Histone H3.1t; H3/t; H3t; H3/g;)
genome : 228,612,546 - 228,613,026 (481)
query : 1 - 481 (481/482)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.998
InterPro :
IPR000164 : Histone H3/CENP-A
IPR007125 : Histone core
IPR009072 : Histone-fold
GO :
0000786 : Cellular Component : nucleosome
0003677 : Molecular Function : DNA binding
0006334 : Biological Process : nucleosome assembly
0046982 : Molecular Function : protein heterodimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028778)
HIX0028778
HIT000200316 (
NM_003493
)
(Histone H3.1t; H3/t; H3t; H3/g;)
genome : 228,612,546 - 228,613,026 (481)
query : 1 - 481 (481/481)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028778)
HIX0028778
HIT000347976 (
ENST00000366696
)
(Histone H3.1t; H3/t; H3t; H3/g;)
genome : 228,612,546 - 228,613,026 (481)
query : 1 - 481 (481/481)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028778)
HIX0028778
HIT000431083
(
AK312217
)
(Histone H3.1t; H3/t; H3t; H3/g;)
genome : 228,612,616 - 228,613,059 (444)
query : 1 - 444 (444/444)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR000164 : Histone H3/CENP-A
IPR007125 : Histone core
IPR009072 : Histone-fold
GO :
0000786 : Cellular Component : nucleosome
0003677 : Molecular Function : DNA binding
0006334 : Biological Process : nucleosome assembly
0046982 : Molecular Function : protein heterodimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028778)
HIX0028778
HIT000268882
(
CR542013
)
(Histone H3.1t; H3/t; H3t; H3/g;)
genome : 228,612,619 - 228,613,026 (408)
query : 1 - 408 (408/408)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR000164 : Histone H3/CENP-A
IPR007125 : Histone core
IPR009072 : Histone-fold
GO :
0000786 : Cellular Component : nucleosome
0003677 : Molecular Function : DNA binding
0006334 : Biological Process : nucleosome assembly
0046982 : Molecular Function : protein heterodimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028778)
HIX0028778
HIT000442307
(
DQ575776
)
(Non-protein coding transcript.)
genome : 228,612,810 - 228,612,839 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028778)
HIX0028778
HIT000440972
(
DQ574441
)
(Non-protein coding transcript.)
genome : 228,612,826 - 228,612,855 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028778)
HIX0161335
HIT000548136 (
ENST00000450202
)
(Ribosomal protein L25/L23 family protein.)
genome : 228,636,864 - 228,637,322 (459)
query : 1 - 459 (459/459)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, mito 9, extr 7, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161335)
HIX0001670
HIT000265983
(
BC082269
)
(Histone H2A type 3;)
genome : 228,644,681 - 228,645,550 (870)
query : 1 - 870 (870/889)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR002119 : Histone H2A
IPR007125 : Histone core
IPR009072 : Histone-fold
GO :
0000786 : Cellular Component : nucleosome
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
0046982 : Molecular Function : protein heterodimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001670)
HIX0001670
HIT000030212
(
BC001193
)
Representative transcript
(Histone H2A type 3;)
genome : 228,644,681 - 228,645,560 (880)
query : 1 - 880 (880/897)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR002119 : Histone H2A
IPR007125 : Histone core
IPR009072 : Histone-fold
GO :
0000786 : Cellular Component : nucleosome
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
0046982 : Molecular Function : protein heterodimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001670)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK083155
Rattus
sp. (Rat) : BC099140
Bos
sp. (Cow) : BC134772
Canis
sp. (Dog) : ENSCAFT00000037570
Gallus
sp. (Chicken) : ENSGALT00000038064
Monodelphis
sp. (Opossum) : ENSMODT00000023808
Pongo
sp. (Orangutan) : ENSPPYT00000000146
Tetraodon
sp. (Tetraodon) : GSTENT00016339001
Takifugu
sp. (Fugu) : SINFRUT00000177666
Macaca
sp. (Macaque) : XM_001082209
Equus
sp. (Horse) : XM_001495023
Pan
sp. (Chimpanzee) : XM_525084
HIX0001670
HIT000211348 (
NM_033445
)
(Histone H2A type 3;)
genome : 228,645,065 - 228,645,560 (496)
query : 1 - 496 (496/496)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001670)
HIX0001670
HIT000347975 (
ENST00000366695
)
(Histone H2A type 3;)
genome : 228,645,065 - 228,645,560 (496)
query : 1 - 496 (496/496)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001670)
HIX0001670
HIT000430796
(
AK311930
)
(Histone H2A type 3;)
genome : 228,645,126 - 228,645,571 (446)
query : 2 - 447 (446/447)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.998
InterPro :
IPR002119 : Histone H2A
IPR007125 : Histone core
IPR009072 : Histone-fold
GO :
0000786 : Cellular Component : nucleosome
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
0046982 : Molecular Function : protein heterodimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001670)
HIX0001671
HIT000016087
(
AK091220
)
Representative transcript
(Histone H2B type 3-B; H2B type 12;)
genome : 228,645,808 - 228,648,171 (2,364)
query : 1 - 2,359 (2,359/2,359)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
InterPro :
IPR000558 : Histone H2B
IPR007125 : Histone core
IPR009072 : Histone-fold
GO :
0000786 : Cellular Component : nucleosome
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
0046982 : Molecular Function : protein heterodimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001671)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC107302
Tetraodon
sp. (Tetraodon) : CR669650
Gallus
sp. (Chicken) : ENSGALT00000021778
Pan
sp. (Chimpanzee) : ENSPTRT00000003813
Takifugu
sp. (Fugu) : SINFRUT00000179601
Rattus
sp. (Rat) : XM_001076772
Macaca
sp. (Macaque) : XM_001082086
Equus
sp. (Horse) : XM_001918289
Canis
sp. (Dog) : XM_539321
Bos
sp. (Cow) : XM_598354
HIX0001671
HIT000215234 (
NM_175055
)
(Histone H2B type 3-B; H2B type 12;)
genome : 228,645,808 - 228,646,259 (452)
query : 1 - 452 (452/452)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001671)
HIX0001671
HIT000350440 (
ENST00000369160
)
(Histone H2B type 3-B; H2B type 12;)
genome : 228,645,808 - 228,646,259 (452)
query : 1 - 452 (452/452)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001671)
HIX0001671
HIT000336280
(
BC100857
)
(Histone H2B type 3-B; H2B type 12;)
genome : 228,645,809 - 228,646,243 (435)
query : 1 - 435 (435/435)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000558 : Histone H2B
IPR007125 : Histone core
IPR009072 : Histone-fold
GO :
0000786 : Cellular Component : nucleosome
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
0046982 : Molecular Function : protein heterodimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001671)
HIX0001671
HIT000386318
(
BC100855
)
(Histone H2B type 3-B; H2B type 12;)
genome : 228,645,809 - 228,646,243 (435)
query : 1 - 435 (435/435)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000558 : Histone H2B
IPR007125 : Histone core
IPR009072 : Histone-fold
GO :
0000786 : Cellular Component : nucleosome
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
0046982 : Molecular Function : protein heterodimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001671)
HIX0001671
HIT000386319
(
BC100856
)
(Histone H2B type 3-B; H2B type 12;)
genome : 228,645,809 - 228,646,243 (435)
query : 1 - 435 (435/435)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000558 : Histone H2B
IPR007125 : Histone core
IPR009072 : Histone-fold
GO :
0000786 : Cellular Component : nucleosome
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
0046982 : Molecular Function : protein heterodimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001671)
HIX0001671
HIT000386320
(
BC100858
)
(Histone H2B type 3-B; H2B type 12;)
genome : 228,645,809 - 228,646,243 (435)
query : 1 - 435 (435/435)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000558 : Histone H2B
IPR007125 : Histone core
IPR009072 : Histone-fold
GO :
0000786 : Cellular Component : nucleosome
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
0046982 : Molecular Function : protein heterodimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001671)
HIX0001671
HIT000501365
(
BC137467
)
(Histone H2B type 3-B; H2B type 12;)
genome : 228,645,809 - 228,646,243 (435)
query : 1 - 435 (435/435)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000558 : Histone H2B
IPR007125 : Histone core
IPR009072 : Histone-fold
GO :
0000786 : Cellular Component : nucleosome
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
0046982 : Molecular Function : protein heterodimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001671)
HIX0001671
HIT000501366
(
BC137468
)
(Histone H2B type 3-B; H2B type 12;)
genome : 228,645,809 - 228,646,243 (435)
query : 1 - 435 (435/435)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000558 : Histone H2B
IPR007125 : Histone core
IPR009072 : Histone-fold
GO :
0000786 : Cellular Component : nucleosome
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
0046982 : Molecular Function : protein heterodimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001671)
HIX0214058
HIT000692080 (
ENST00000580160
)
(Non-protein coding transcript.)
genome : 228,649,775 - 228,649,853 (79)
query : 1 - 79 (79/79)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214058)
HIX0214058
HIT000725875 (
NR_039812
)
(Non-protein coding transcript.)
genome : 228,649,775 - 228,649,853 (79)
query : 1 - 79 (79/79)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214058)
HIX0178052
HIT000534489 (
ENST00000436555
)
(Histone H2B family protein.)
genome : 228,651,804 - 228,652,327 (524)
query : 1 - 524 (524/524)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178052)
HIX0178052
HIT000122405 (
ENST00000320387
)
(Histone H2B family protein.)
genome : 228,651,914 - 228,652,295 (382)
query : 1 - 378 (378/378)
1 exon
identity = 0.990
3'(0.990)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178052)
HIX0178052
pHIT000099091 ( pHIT000099091 )
Representative transcript
(Conserved hypothetical protein.)
genome : 228,651,945 - 228,652,295 (351)
query : 1 - 351 (351/351)
1 exon
InterPro :
IPR000558 : Histone H2B
IPR007125 : Histone core
IPR009072 : Histone-fold
GO :
0000786 : Cellular Component : nucleosome
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
0046982 : Molecular Function : protein heterodimerization activity
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178052)
CAGE tag :
T01F0D82B890
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK018765
Canis
sp. (Dog) : ENSCAFT00000037582
Equus
sp. (Horse) : ENSECAT00000004417
Tetraodon
sp. (Tetraodon) : GSTENT00001940001
Rattus
sp. (Rat) : XM_001076753
Macaca
sp. (Macaque) : XM_001081967
Pan
sp. (Chimpanzee) : XM_525086
HIX0028711
HIT000088679
(
BC015435
)
(Conserved hypothetical protein.)
genome : 228,673,894 - 228,674,732 (839)
query : 1 - 839 (839/865)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 6.83333, nucl 6.5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028711)
HIX0028711
HIT000095934
(
BC039872
)
(Conserved hypothetical protein.)
genome : 228,673,894 - 228,674,731 (838)
query : 1 - 838 (838/864)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 6.83333, nucl 6.5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028711)
HIX0028711
HIT000260245
(
BC061893
)
Representative transcript
(Conserved hypothetical protein.)
genome : 228,673,890 - 228,674,821 (932)
query : 1 - 932 (932/946)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 6.83333, nucl 6.5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028711)
HIX0028697
HIT000117187 (
ENST00000305943
)
(E3 ubiquitin-protein ligase RNF187; EC=6.3.2.-; RING domain AP1 coactivator 1; RACO-1; RING finger protein 187;)
genome : 228,674,762 - 228,683,467 (8,706)
query : 1 - 3,017 (3,017/3,017)
4 exons
identity = 0.998
5'(1.000;0.979;0.982;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028697)
HIX0028697
HIT000559158 (
NM_001010858
)
(E3 ubiquitin-protein ligase RNF187; EC=6.3.2.-; RING domain AP1 coactivator 1; RACO-1; RING finger protein 187;)
genome : 228,675,068 - 228,683,889 (8,822)
query : 1 - 3,133 (3,133/3,133)
4 exons
identity = 0.998
5'(1.000;0.979;0.982;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 15
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028697)
HIX0028697
HIT000087929
(
BC012758
)
Representative transcript
(E3 ubiquitin-protein ligase RNF187; EC=6.3.2.-; RING domain AP1 coactivator 1; RACO-1; RING finger protein 187;)
genome : 228,675,094 - 228,682,670 (7,577)
query : 1 - 1,888 (1,888/1,905)
4 exons
identity = 0.996
5'(1.000;0.979;0.982;0.998)3'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR017907 : Zinc finger, RING-type, conserved site
IPR018957 : Zinc finger, C3HC4 RING-type
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028697)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB060890
Mus
sp. (Mouse) : AK075944
Bos
sp. (Cow) : BC123599
Rattus
sp. (Rat) : XM_001076738
Pan
sp. (Chimpanzee) : XM_001143744
HIX0028697
HIT000265907
(
BC080645
)
(E3 ubiquitin-protein ligase RNF187.)
genome : 228,675,534 - 228,682,674 (7,141)
query : 1 - 1,452 (1,452/1,516)
4 exons
identity = 0.994
5'(1.000;0.979;0.982;0.997)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 13, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028697)
HIX0028697
HIT000261401
(
BC064481
)
(E3 ubiquitin-protein ligase RNF187.)
genome : 228,675,534 - 228,682,674 (7,141)
query : 1 - 1,452 (1,452/1,509)
4 exons
identity = 0.994
5'(1.000;0.979;0.982;0.997)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 13, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028697)
HIX0028697
HIT000586658 (
ENST00000482739
)
(E3 ubiquitin-protein ligase RNF187; EC=6.3.2.-; RING domain AP1 coactivator 1; RACO-1; RING finger protein 187;)
genome : 228,675,923 - 228,683,467 (7,545)
query : 1 - 2,467 (2,467/2,467)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11.5, cyto 9.5, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028697)
HIX0028697
HIT000588151 (
ENST00000484293
)
(E3 ubiquitin-protein ligase RNF187.)
genome : 228,676,659 - 228,682,393 (5,735)
query : 1 - 805 (805/805)
4 exons
identity = 0.991
5'(0.980;0.982;1.000;0.990)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, nucl 8, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028697)
HIX0028697
HIT000597027 (
ENST00000493597
)
(Hypothetical short protein.)
genome : 228,680,937 - 228,682,670 (1,734)
query : 1 - 417 (417/417)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028697)
HIX0028697
HIT000086986
(
BC008022
)
(Hypothetical protein.)
genome : 228,680,944 - 228,682,670 (1,727)
query : 1 - 1,119 (1,119/1,144)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 12, cyto_nucl 10.5, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028697)
HIX0028697
HIT000085886
(
BC000821
)
(Hypothetical protein.)
genome : 228,681,916 - 228,682,670 (755)
query : 1 - 755 (755/773)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 12, cyto_nucl 10.5, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028697)
HIX0028697
HIT000259291
(
BC053571
)
(Hypothetical protein.)
genome : 228,681,944 - 228,682,670 (727)
query : 1 - 727 (727/847)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 12, cyto_nucl 10.5, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028697)
HIX0114256
HIT000707762 (
ENST00000595971
)
(Conserved hypothetical protein.)
genome : 228,696,356 - 228,700,006 (3,651)
query : 1 - 869 (869/869)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr_plas 15.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0114256)
HIX0114256
HIT000483840 (
ENST00000400948
)
(Conserved hypothetical protein.)
genome : 228,698,126 - 228,700,004 (1,879)
query : 1 - 693 (693/693)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0114256)
HIX0114256
HIT000511064 (
ENST00000413130
)
(Conserved hypothetical protein.)
genome : 228,698,237 - 228,699,989 (1,753)
query : 1 - 603 (603/603)
3 exons
identity = 0.995
3'(1.000;1.000;0.973)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 3.5, cyto_nucl 3.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0114256)
HIX0001673
HIT000660102 (
NR_037962
)
(Rho-related GTP-binding protein RhoV; Rho family GTPase Chp;)
genome : 228,744,622 - 228,882,416 (137,795)
query : 1 - 3,830 (3,830/3,830)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 4, nucl 3, cyto_golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001673)
HIX0001673
HIT000017127_03
(
AK092260
)
(Hypothetical protein.)
genome : 228,744,885 - 228,788,159 (43,275)
query : 1 - 2,472 (2,472/2,472)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 9, cyto_nucl 7.83333, cyto_pero 5.83333,
nucl 5.5, E.R._mito 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001673)
HIX0001673
HIT000367179_03 (
NR_002834
)
(Hypothetical protein.)
genome : 228,744,885 - 228,788,159 (43,275)
query : 1 - 2,472 (2,472/2,472)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 9, cyto_nucl 7.83333, cyto_pero 5.83333,
nucl 5.5, E.R._mito 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001673)
HIX0001673
HIT000124993_05 (
ENST00000327449
)
(Hypothetical protein.)
genome : 228,744,885 - 228,788,150 (43,266)
query : 1 - 2,463 (2,463/2,463)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 9, cyto_nucl 7.83333, cyto_pero 5.83333,
nucl 5.5, E.R._mito 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001673)
HIX0017775
HIT000012577
(
AK055963
)
Representative transcript
(Conserved hypothetical protein.)
genome : 228,783,361 - 228,785,752 (2,392)
query : 1 - 2,392 (2,392/2,392)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 6.5, extr_plas 4.5, cyto 4, E.R. 2,
cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017775)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001146043
HIX0001673
HIT000539259 (
ENST00000441325
)
(Conserved hypothetical protein.)
genome : 228,785,988 - 228,787,126 (1,139)
query : 1 - 1,139 (1,139/1,139)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001673)
HIX0117269
HIT000470165 (
ENST00000384151
)
(Non-protein coding transcript.)
genome : 228,788,183 - 228,788,307 (125)
query : 1 - 125 (125/125)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117269)
HIX0160783
HIT000570757_01 (
ENST00000466086
)
(Ferritin family protein.)
genome : 228,823,162 - 228,823,573 (412)
query : 1 - 412 (412/412)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160783)
HIX0160783
HIT000511434_02 (
ENST00000413500
)
(Ferritin family protein.)
genome : 228,823,164 - 228,823,574 (411)
query : 1 - 411 (411/411)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160783)
HIX0001673
HIT000208311 (
NM_021205
)
(Rho-related GTP-binding protein RhoU; CDC42-like GTPase 1; GTP-binding protein-like 1; Rho GTPase-like protein ARHU; Ryu GTPase; Wnt-1 responsive Cdc42 homolog 1; WRCH-1;)
genome : 228,870,824 - 228,882,415 (11,592)
query : 1 - 4,371 (4,371/4,386)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10.5, extr 10, nucl 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001673)
HIX0001673
HIT000347971 (
ENST00000366691
)
(Rho-related GTP-binding protein RhoU; CDC42-like GTPase 1; GTP-binding protein-like 1; Rho GTPase-like protein ARHU; Ryu GTPase; Wnt-1 responsive Cdc42 homolog 1; WRCH-1;)
genome : 228,870,824 - 228,882,416 (11,593)
query : 1 - 4,372 (4,372/4,372)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10.5, extr 10, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001673)
HIX0001673
HIT000074028
(
AF211836
)
Representative transcript
(Rho-related GTP-binding protein RhoU; CDC42-like GTPase 1; GTP-binding protein-like 1; Rho GTPase-like protein ARHU; Ryu GTPase; Wnt-1 responsive Cdc42 homolog 1; WRCH-1;)
genome : 228,870,868 - 228,882,413 (11,546)
query : 1 - 4,325 (4,325/4,347)
3 exons
identity = 0.998
5'(1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003578 : Small GTPase superfamily, Rho type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10.5, extr 10, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001673)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AB051827
Danio
sp. (Zebrafish) : BC085398
Equus
sp. (Horse) : ENSECAT00000007674
Oryzias
sp. (Medaka) : ENSORLT00000008649
Oryzias
sp. (Medaka) : ENSORLT00000013399
Pongo
sp. (Orangutan) : ENSPPYT00000000141
Tetraodon
sp. (Tetraodon) : GSTENT00032800001
Takifugu
sp. (Fugu) : SINFRUT00000158934
Monodelphis
sp. (Opossum) : XM_001378995
Gallus
sp. (Chicken) : XM_426146
Pan
sp. (Chimpanzee) : XM_525089
Canis
sp. (Dog) : XM_536354
HIX0001673
HIT000329446
(
AB209511
)
(Rho-related GTP-binding protein RhoU; CDC42-like GTPase 1; GTP-binding protein-like 1; Rho GTPase-like protein ARHU; Ryu GTPase; Wnt-1 responsive Cdc42 homolog 1; WRCH-1;)
genome : 228,871,238 - 228,882,409 (11,172)
query : 1 - 3,897 (3,897/3,897)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003578 : Small GTPase superfamily, Rho type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 8.5, cyto_nucl 8.5, nucl 7.5,
extr_plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001673)
HIX0001673
HIT000422768
(
AK289971
)
(Rho-related GTP-binding protein RhoU; CDC42-like GTPase 1; GTP-binding protein-like 1; Rho GTPase-like protein ARHU; Ryu GTPase; Wnt-1 responsive Cdc42 homolog 1; WRCH-1;)
genome : 228,871,239 - 228,880,077 (8,839)
query : 2 - 1,619 (1,618/1,619)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 0.999
InterPro :
IPR001806 : Small GTPase superfamily
IPR003578 : Small GTPase superfamily, Rho type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10.5, extr 10, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001673)
HIX0001673
HIT000052317
(
BC040076
)
(Rho-related GTP-binding protein RhoU; CDC42-like GTPase 1; GTP-binding protein-like 1; Rho GTPase-like protein ARHU; Ryu GTPase; Wnt-1 responsive Cdc42 homolog 1; WRCH-1;)
genome : 228,871,243 - 228,882,410 (11,168)
query : 1 - 3,947 (3,947/3,995)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003578 : Small GTPase superfamily, Rho type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10.5, extr 10, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001673)
HIX0001673
HIT000076135
(
AF282258
)
(Rho-related GTP-binding protein RhoU; CDC42-like GTPase 1; GTP-binding protein-like 1; Rho GTPase-like protein ARHU; Ryu GTPase; Wnt-1 responsive Cdc42 homolog 1; WRCH-1;)
genome : 228,871,252 - 228,879,873 (8,622)
query : 2 - 1,401 (1,400/1,402)
3 exons
identity = 0.999
5'(0.998;1.000;0.999)3'
coverage = 0.999
InterPro :
IPR001806 : Small GTPase superfamily
IPR003578 : Small GTPase superfamily, Rho type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10.5, extr 10, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001673)
HIX0001673
HIT000061242
(
AB074878
)
(Rho-related GTP-binding protein RhoU; CDC42-like GTPase 1; GTP-binding protein-like 1; Rho GTPase-like protein ARHU; Ryu GTPase; Wnt-1 responsive Cdc42 homolog 1; WRCH-1;)
genome : 228,871,351 - 228,879,552 (8,202)
query : 1 - 981 (981/981)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003578 : Small GTPase superfamily, Rho type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10.5, extr 10, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001673)
HIX0001673
HIT000059594
(
AB051826
)
(Rho-related GTP-binding protein RhoU; CDC42-like GTPase 1; GTP-binding protein-like 1; Rho GTPase-like protein ARHU; Ryu GTPase; Wnt-1 responsive Cdc42 homolog 1; WRCH-1;)
genome : 228,871,411 - 228,879,729 (8,319)
query : 1 - 1,098 (1,098/1,098)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003578 : Small GTPase superfamily, Rho type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10.5, extr 10, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001673)
HIX0001673
HIT000078588
(
AF378087
)
(Rho-related GTP-binding protein RhoU; CDC42-like GTPase 1; GTP-binding protein-like 1; Rho GTPase-like protein ARHU; Ryu GTPase; Wnt-1 responsive Cdc42 homolog 1; WRCH-1;)
genome : 228,871,490 - 228,879,487 (7,998)
query : 1 - 777 (777/777)
3 exons
identity = 0.999
5'(0.996;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003578 : Small GTPase superfamily, Rho type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10.5, extr 10, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001673)
HIX0001673
HIT000075077
(
AF251701
)
(Rho-related GTP-binding protein RhoU; CDC42-like GTPase 1; GTP-binding protein-like 1; Rho GTPase-like protein ARHU; Ryu GTPase; Wnt-1 responsive Cdc42 homolog 1; WRCH-1;)
genome : 228,871,634 - 228,879,732 (8,099)
query : 2 - 881 (880/885)
3 exons
identity = 0.978
5'(0.842;1.000;1.000)3'
coverage = 0.994
InterPro :
IPR001806 : Small GTPase superfamily
IPR003578 : Small GTPase superfamily, Rho type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 13, cyto 12, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001673)
HIX0001673
HIT000003952
(
AK001478
)
(Conserved hypothetical protein.)
genome : 228,879,989 - 228,882,409 (2,421)
query : 1 - 2,421 (2,421/2,421)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 10.5, nucl 10, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001673)
HIX0001673
HIT000577645 (
ENST00000473307
)
(Hypothetical short protein.)
genome : 228,880,673 - 228,881,090 (418)
query : 1 - 360 (360/360)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 8.5, cyto 8, nucl 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001673)
HIX0001673
HIT000596963 (
ENST00000493528
)
(Hypothetical short protein.)
genome : 228,881,987 - 228,882,416 (430)
query : 1 - 376 (376/376)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001673)
HIX0001674
HIT000027415
(
AL832503
)
Representative transcript
(Conserved hypothetical protein.)
genome : 229,024,067 - 229,085,488 (61,422)
query : 2 - 3,541 (3,540/3,559)
3 exons
identity = 0.999
3'(0.999;1.000;0.976)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 9, cyto_nucl 7.66667, nucl 6, cyto 5,
cyto_pero 4.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001674)
HIX0020244
HIT000018791
(
AK093930
)
Representative transcript
(Conserved hypothetical protein.)
genome : 229,050,380 - 229,052,954 (2,575)
query : 1 - 2,579 (2,579/2,579)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, plas 5, nucl 4, pero 4, cyto 2, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020244)
HIX0203496
HIT000439425_05
(
DQ572894
)
Representative transcript
(Non-protein coding transcript.)
genome : 229,091,928 - 229,091,956 (29)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203496)
HIX0203471
eHIT000012180 ( ESTsASS_1_2186 )
Representative transcript
(Non-protein coding transcript.)
genome : 229,158,520 - 229,174,021 (15,502)
query : 1 - 659 (659/659)
4 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203471)
ESTs used for assembly :
BX956548
HIX0161000
HIT000536613 (
ENST00000438679
)
(FeS cluster insertion protein family protein.)
genome : 229,177,918 - 229,178,338 (421)
query : 1 - 421 (421/421)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 8, nucl 4, cyto_pero 4, cyto_plas 4,
cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161000)
HIX0161000
HIT000641856_01 (
ENST00000542811
)
(FeS cluster biogenesis domain containing protein.)
genome : 229,178,244 - 229,178,336 (93)
query : 1 - 93 (93/93)
1 exon
identity = 0.957
5'(0.957)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161000)
HIX0160850
HIT000531668 (
ENST00000433734
)
(Hypothetical short protein.)
genome : 229,228,562 - 229,230,652 (2,091)
query : 1 - 599 (599/599)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 6.5, nucl 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160850)
HIX0160774
HIT000528611 (
ENST00000430677
)
(Conserved hypothetical protein.)
genome : 229,359,208 - 229,363,309 (4,102)
query : 1 - 792 (792/792)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160774)
HIX0029344
HIT000097496
(
BC043167
)
Representative transcript
(Conserved hypothetical protein.)
genome : 229,371,115 - 229,373,783 (2,669)
query : 1 - 2,666 (2,666/2,682)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 6.33333, cyto 6, mito 5,
cyto_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029344)
HIX0001675
HIT000022341
(
AK097487
)
Representative transcript
(Conserved hypothetical protein.)
genome : 229,385,383 - 229,387,557 (2,175)
query : 1 - 2,176 (2,176/2,176)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001675)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000000140
Pan
sp. (Chimpanzee) : ENSPTRT00000003818
HIX0001675
HIT000123419 (
ENST00000323223
)
(PDZ and LIM domain protein 5 isoform i.)
genome : 229,385,383 - 229,387,557 (2,175)
query : 1 - 2,175 (2,175/2,175)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001675)
HIX0178054
HIT000527161 (
ENST00000429227
)
(Hypothetical short protein.)
genome : 229,394,028 - 229,406,750 (12,723)
query : 1 - 868 (868/868)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 8, cyto_nucl 8, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178054)
HIX0178054
HIT000534268 (
ENST00000436334
)
(Non-protein coding transcript.)
genome : 229,405,113 - 229,406,775 (1,663)
query : 1 - 315 (315/315)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178054)
HIX0178054
HIT000532338 (
ENST00000434404
)
(Conserved hypothetical protein.)
genome : 229,406,674 - 229,407,346 (673)
query : 1 - 673 (673/673)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 10, cyto_nucl 4.66667, nucl 4.5,
cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178054)
HIX0213881
HIT000585932 (
ENST00000481981
)
(Small GTPase superfamily protein.)
genome : 229,406,822 - 229,424,629 (17,808)
query : 1 - 531 (531/531)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 6.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213881)
HIX0213881
HIT000432673
(
AK313807
)
Representative transcript
(Small GTPase superfamily protein.)
genome : 229,406,836 - 229,438,724 (31,889)
query : 1 - 908 (908/908)
7 exons
identity = 0.993
5'(1.000;1.000;1.000;1.000;0.981;0.968;1.000)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10, mito 9, extr 6, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213881)
HIX0213881
HIT000578206 (
ENST00000473894
)
(Small GTPase superfamily protein.)
genome : 229,406,941 - 229,439,641 (32,701)
query : 1 - 708 (708/708)
6 exons
identity = 0.992
5'(1.000;1.000;0.981;0.968;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 8, nucl 8, cyto_mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213881)
HIX0213881
HIT000195225
(
M28211
)
(Small GTPase superfamily protein.)
genome : 229,407,032 - 229,438,739 (31,708)
query : 1 - 727 (727/735)
7 exons
identity = 0.981
5'(0.955;1.000;1.000;1.000;0.981;0.947;0.985)3'
coverage = 0.989
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, mito_nucl 13, nucl 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213881)
HIX0213881
HIT000080871
(
AF498934
)
(Small GTPase superfamily protein.)
genome : 229,407,087 - 229,438,724 (31,638)
query : 1 - 657 (657/657)
7 exons
identity = 0.991
5'(1.000;1.000;1.000;1.000;0.981;0.968;1.000)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10, mito 9, extr 6, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213881)
HIX0213881
HIT000592947 (
ENST00000489342
)
(Small GTPase superfamily protein.)
genome : 229,422,232 - 229,424,946 (2,715)
query : 1 - 431 (431/431)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213881)
HIX0214129
HIT000264245
(
BC070287
)
Representative transcript
(Conserved hypothetical protein.)
genome : 229,440,604 - 229,441,249 (646)
query : 1 - 646 (646/762)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, cyto 6, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214129)
HIX0203708
HIT000516282 (
ENST00000418348
)
(Hypothetical short protein.)
genome : 229,455,150 - 229,458,834 (3,685)
query : 1 - 640 (640/640)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203708)
HIX0213772
HIT000023631
(
AK098801
)
(Conserved hypothetical protein.)
genome : 229,456,761 - 229,458,365 (1,605)
query : 1 - 1,475 (1,475/1,475)
2 exons
identity = 0.999
3'(0.998;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, cyto 6.5, mito 6, cyto_nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213772)
HIX0213772
HIT000019470
(
AK094615
)
(Conserved hypothetical protein.)
genome : 229,456,763 - 229,459,943 (3,181)
query : 1 - 3,181 (3,181/3,181)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 4, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213772)
HIX0213772
HIT000043338
(
AK123465
)
Representative transcript
(Conserved hypothetical protein.)
genome : 229,457,262 - 229,476,380 (19,119)
query : 2 - 4,400 (4,399/4,400)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12, nucl 9.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213772)
HIX0213772
HIT000347966 (
ENST00000366686
)
(Conserved hypothetical protein.)
genome : 229,457,262 - 229,476,380 (19,119)
query : 1 - 4,399 (4,399/4,399)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12, nucl 9.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213772)
HIX0214098
HIT000052165
(
BC039241
)
Representative transcript
(Conserved hypothetical protein.)
genome : 229,476,980 - 229,478,300 (1,321)
query : 1 - 1,320 (1,320/1,349)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 14.5, cyto 12.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214098)
HIX0203824
HIT000615645 (
ENST00000516242
)
(Non-protein coding transcript.)
genome : 229,546,247 - 229,546,514 (268)
query : 1 - 268 (268/268)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203824)
HIX0160832
HIT000530869 (
ENST00000432935
)
(Conserved hypothetical protein.)
genome : 229,560,767 - 229,561,397 (631)
query : 1 - 350 (350/350)
2 exons
identity = 0.980
5'(1.000;0.978)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 6, cyto 3, golg 3, cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160832)
HIX0001679
HIT000035891
(
BC012597
)
Representative transcript
(Actin, alpha skeletal muscle; Alpha-actin-1; Precursor;)
genome : 229,566,996 - 229,569,841 (2,846)
query : 5 - 1,491 (1,487/1,694)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.989)5'
coverage = 0.997
InterPro :
IPR004000 : Actin family
IPR004001 : Actin, conserved site
IPR020902 : Actin/actin-like conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001679)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK027919
Rattus
sp. (Rat) : BC061974
Bos
sp. (Cow) : BC134665
Tetraodon
sp. (Tetraodon) : CR679698
Pongo
sp. (Orangutan) : CR859327
Gallus
sp. (Chicken) : ENSGALT00000018064
Takifugu
sp. (Fugu) : SINFRUT00000145954
Equus
sp. (Horse) : XM_001497713
Canis
sp. (Dog) : XM_843847
Macaca
sp. (Macaque) : XR_009727
Pan
sp. (Chimpanzee) : XR_023722
HIX0001679
HIT000057192
(
BX648545
)
(Actin, alpha skeletal muscle; Alpha-actin-1; Precursor;)
genome : 229,566,994 - 229,569,841 (2,848)
query : 2 - 1,220 (1,219/1,240)
6 exons
identity = 0.993
3'(1.000;1.000;1.000;0.963;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR004000 : Actin family
IPR004001 : Actin, conserved site
IPR020902 : Actin/actin-like conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001679)
HIX0001679
HIT000198105 (
NM_001100
)
(Actin, alpha skeletal muscle; Alpha-actin-1; Precursor;)
genome : 229,566,994 - 229,569,843 (2,850)
query : 1 - 1,491 (1,491/1,509)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001679)
HIX0001679
HIT000347964 (
ENST00000366684
)
(Actin, alpha skeletal muscle; Alpha-actin-1; Precursor;)
genome : 229,566,992 - 229,569,841 (2,850)
query : 1 - 1,491 (1,491/1,491)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001679)
HIX0001679
HIT000495321
(
AK300697
)
(Actin, alpha skeletal muscle; Alpha-actin-1; Precursor;)
genome : 229,566,995 - 229,569,841 (2,847)
query : 1 - 1,386 (1,386/1,386)
7 exons
identity = 0.994
3'(0.997;1.000;1.000;1.000;0.975;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004000 : Actin family
IPR004001 : Actin, conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001679)
HIX0001679
HIT000347963 (
ENST00000366683
)
(Actin, alpha skeletal muscle; Alpha-actin-1; Precursor;)
genome : 229,566,996 - 229,569,845 (2,850)
query : 1 - 1,227 (1,227/1,227)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001679)
HIX0001679
HIT000021757
(
AK096902
)
(Actin, alpha skeletal muscle; Alpha-actin-1; Precursor;)
genome : 229,566,997 - 229,569,841 (2,845)
query : 1 - 1,381 (1,381/1,381)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.991;1.000;0.993;
1.000)5'
coverage = 1.000
InterPro :
IPR004000 : Actin family
IPR004001 : Actin, conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001679)
HIX0001679
HIT000191035
(
J00068
)
(Actin, alpha skeletal muscle; Alpha-actin-1; Precursor;)
genome : 229,567,109 - 229,569,841 (2,733)
query : 1 - 1,374 (1,374/1,374)
7 exons
identity = 0.998
3'(1.000;1.000;1.000;0.994;0.997;1.000;0.989)5'
coverage = 1.000
InterPro :
IPR004000 : Actin family
IPR004001 : Actin, conserved site
IPR020902 : Actin/actin-like conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001679)
HIX0001679
HIT000085721
(
AY280960
)
(Actin, alpha skeletal muscle; Alpha-actin-1; Precursor;)
genome : 229,567,247 - 229,568,862 (1,616)
query : 1 - 764 (764/765)
5 exons
identity = 0.996
3'(1.000;0.993;0.962;0.997;1.000)5'
coverage = 0.999
InterPro :
IPR004000 : Actin family
IPR004001 : Actin, conserved site
IPR020902 : Actin/actin-like conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001679)
HIX0001679
HIT000268453
(
CR536516
)
(Actin, alpha skeletal muscle; Alpha-actin-1; Precursor;)
genome : 229,567,246 - 229,568,862 (1,617)
query : 1 - 1,134 (1,134/1,134)
6 exons
identity = 0.999
3'(1.000;1.000;0.995;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004000 : Actin family
IPR004001 : Actin, conserved site
IPR020902 : Actin/actin-like conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001679)
HIX0001679
HIT000268667
(
CR541796
)
(Actin, alpha skeletal muscle; Alpha-actin-1; Precursor;)
genome : 229,567,249 - 229,568,862 (1,614)
query : 1 - 1,131 (1,131/1,131)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004000 : Actin family
IPR004001 : Actin, conserved site
IPR020902 : Actin/actin-like conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001679)
HIX0001679
HIT000451835_03
(
DQ585304
)
(Non-protein coding transcript.)
genome : 229,567,887 - 229,567,917 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001679)
HIX0029498
HIT000532245 (
ENST00000434311
)
(Hypothetical short protein.)
genome : 229,576,031 - 229,576,767 (737)
query : 1 - 478 (478/478)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 6, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029498)
HIX0001680
HIT000004228
(
AK001754
)
(Nuclear pore complex protein Nup133; 133 kDa nucleoporin; Nucleoporin Nup133;)
genome : 229,577,025 - 229,625,825 (48,801)
query : 1 - 3,027 (3,027/3,030)
18 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 25, nucl 3, cyto 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001680)
HIX0001680
HIT000064318
(
AF052123
)
(Nuclear pore complex protein Nup133; 133 kDa nucleoporin; Nucleoporin Nup133;)
genome : 229,577,044 - 229,600,616 (23,573)
query : 1 - 1,773 (1,773/1,794)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR007187 : Nucleoporin, Nup133/Nup155-like, C-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 13.5, mito 4.5, E.R._mito 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001680)
HIX0001680
HIT000207055 (
NM_018230
)
(Nuclear pore complex protein Nup133; 133 kDa nucleoporin; Nucleoporin Nup133;)
genome : 229,577,044 - 229,644,088 (67,045)
query : 1 - 4,170 (4,170/4,170)
26 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 9, nucl 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001680)
HIX0001680
HIT000004150
(
AK001676
)
(Nuclear pore complex protein Nup133; 133 kDa nucleoporin; Nucleoporin Nup133;)
genome : 229,577,045 - 229,644,088 (67,044)
query : 1 - 4,170 (4,170/4,170)
26 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 9, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001680)
HIX0001680
HIT000107949 (
ENST00000261396
)
(Nuclear pore complex protein Nup133; 133 kDa nucleoporin; Nucleoporin Nup133;)
genome : 229,577,045 - 229,644,088 (67,044)
query : 1 - 4,169 (4,169/4,169)
26 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 9, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001680)
HIX0001680
HIT000005846
(
AK022572
)
(Nuclear pore complex protein Nup133; 133 kDa nucleoporin; Nucleoporin Nup133;)
genome : 229,577,045 - 229,613,437 (36,393)
query : 1 - 2,415 (2,415/2,415)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR007187 : Nucleoporin, Nup133/Nup155-like, C-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 13, nucl 11, mito 3, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001680)
HIX0001680
HIT000017206
(
AK092339
)
(Nuclear pore complex protein Nup133; 133 kDa nucleoporin; Nucleoporin Nup133;)
genome : 229,577,050 - 229,644,045 (66,996)
query : 1 - 3,374 (3,374/3,374)
26 exons
identity = 0.998
3'(0.993;0.929;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR014908 : Nucleoporin, Nup133/Nup155-like, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 10, mito_nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001680)
HIX0001680
HIT000347959 (
ENST00000366679
)
(Nuclear pore complex protein Nup133; 133 kDa nucleoporin; Nucleoporin Nup133;)
genome : 229,577,050 - 229,644,045 (66,996)
query : 1 - 3,374 (3,374/3,374)
26 exons
identity = 0.999
3'(1.000;0.929;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 9, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001680)
HIX0001680
HIT000038734
(
BC020107
)
(Nuclear pore complex protein Nup133; 133 kDa nucleoporin; Nucleoporin Nup133;)
genome : 229,577,487 - 229,644,072 (66,586)
query : 1 - 3,711 (3,711/3,733)
26 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR007187 : Nucleoporin, Nup133/Nup155-like, C-terminal
IPR014908 : Nucleoporin, Nup133/Nup155-like, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 9, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001680)
HIX0001680
HIT000593916 (
ENST00000490352
)
(Nuclear pore complex protein Nup133; 133 kDa nucleoporin; Nucleoporin Nup133;)
genome : 229,577,526 - 229,586,498 (8,973)
query : 1 - 643 (643/643)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_pero 14.1667, cyto_nucl 13.3333,
pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001680)
HIX0001680
HIT000499485
(
AK304861
)
(Nuclear pore complex protein Nup133; 133 kDa nucleoporin; Nucleoporin Nup133;)
genome : 229,577,594 - 229,644,074 (66,481)
query : 1 - 3,521 (3,521/3,521)
26 exons
identity = 0.994
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR007187 : Nucleoporin, Nup133/Nup155-like, C-terminal
IPR014908 : Nucleoporin, Nup133/Nup155-like, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 12.5, cyto 11.5, cysk 3, extr 2,
mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001680)
HIX0001680
HIT000498685
(
AK304061
)
(Nuclear pore complex protein Nup133; 133 kDa nucleoporin; Nucleoporin Nup133;)
genome : 229,577,636 - 229,644,103 (66,468)
query : 1 - 3,545 (3,545/3,545)
27 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR007187 : Nucleoporin, Nup133/Nup155-like, C-terminal
IPR014908 : Nucleoporin, Nup133/Nup155-like, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001680)
HIX0001680
HIT000636551 (
ENST00000537506
)
(Nuclear pore complex protein Nup133; 133 kDa nucleoporin; Nucleoporin Nup133;)
genome : 229,577,643 - 229,644,103 (66,461)
query : 1 - 3,538 (3,538/3,538)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001680)
HIX0001680
HIT000433297
(
AK314431
)
Representative transcript
(Nuclear pore complex protein Nup133; 133 kDa nucleoporin; Nucleoporin Nup133;)
genome : 229,577,651 - 229,644,045 (66,395)
query : 1 - 3,520 (3,520/3,520)
26 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR007187 : Nucleoporin, Nup133/Nup155-like, C-terminal
IPR014908 : Nucleoporin, Nup133/Nup155-like, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 9, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001680)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK029317
Bos
sp. (Cow) : BC123538
Danio
sp. (Zebrafish) : ENSDART00000100721
Oryzias
sp. (Medaka) : ENSORLT00000000183
Pongo
sp. (Orangutan) : ENSPPYT00000000137
Takifugu
sp. (Fugu) : SINFRUT00000159511
Monodelphis
sp. (Opossum) : XM_001369235
Equus
sp. (Horse) : XM_001497676
Gallus
sp. (Chicken) : XM_419576
Canis
sp. (Dog) : XM_536351
Macaca
sp. (Macaque) : XR_009727
Pan
sp. (Chimpanzee) : XR_023722
HIX0001680
HIT000588942 (
ENST00000485119
)
(Conserved hypothetical protein.)
genome : 229,584,519 - 229,586,817 (2,299)
query : 1 - 965 (965/965)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 7, cyto 2, mito 2, golg 2, cyto_mito 2,
cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001680)
HIX0021281
HIT000017515
(
AK092648
)
Representative transcript
(Conserved hypothetical protein.)
genome : 229,589,677 - 229,591,617 (1,941)
query : 1 - 1,941 (1,941/1,941)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 23, mito 5, nucl 1, cyto 1, E.R. 1, cyto_nucl 1,
lyso 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021281)
HIX0001680
HIT000005321
(
AK022047
)
(Nuclear pore complex protein Nup133; 133 kDa nucleoporin; Nucleoporin Nup133;)
genome : 229,594,985 - 229,637,253 (42,269)
query : 1 - 1,976 (1,976/2,131)
3 exons
identity = 0.991
3'(0.805)5'
coverage = 0.927
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 11.5, extr 6, nucl 6, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001680)
HIX0214447
HIT000683066 (
ENST00000570156
)
(Obscurin isoform IC.)
genome : 228,395,831 - 228,566,577 (170,747)
query : 1 - 26,927 (26,927/26,927)
116 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 10.5, nucl 6.5, plas 3.5, pero 3,
extr_plas 3, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214447)
HIX0214447
HIT000724926 (
NM_001271223
)
(Obscurin isoform IC.)
genome : 228,395,831 - 228,566,575 (170,745)
query : 1 - 26,925 (26,925/26,925)
116 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 10.5, nucl 6.5, plas 3.5, pero 3,
extr_plas 3, mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214447)
HIX0214447
HIT000243960
(
AJ002535
)
Representative transcript
(Obscurin isoform a.)
genome : 228,395,831 - 228,548,951 (153,121)
query : 1 - 20,429 (20,429/20,435)
81 exons
identity = 0.998
5'(0.807;0.997;0.996;0.992;1.000;1.000;1.000;
1.000;1.000;0.986;1.000;0.996;1.000;1.000;
0.996;1.000;0.964;1.000;0.996;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.996;
1.000;0.996;1.000;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.996;0.989;0.997;1.000;1.000;0.999;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.972;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.990;
1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR000219 : Dbl homology (DH) domain
IPR001452 : SH3 domain
IPR001849 : Pleckstrin homology domain
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR013098 : Immunoglobulin I-set
IPR020682 : Obscurin-myosin light chain kinase
GO :
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0005515 : Molecular Function : protein binding
0035023 : Biological Process : regulation of Rho protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14, cyto 7, mito 2.5, extr 2,
pero 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214447)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AY167411
Mus
sp. (Mouse) : BC060226
Bos
sp. (Cow) : BC151372
Canis
sp. (Dog) : ENSCAFT00000001792
Equus
sp. (Horse) : ENSECAT00000018114
Monodelphis
sp. (Opossum) : ENSMODT00000017530
Oryzias
sp. (Medaka) : ENSORLT00000021987
Pongo
sp. (Orangutan) : ENSPPYT00000000150
Tetraodon
sp. (Tetraodon) : GSTENT00028905001
Macaca
sp. (Macaque) : XR_009827
HIX0214447
HIT000347987 (
ENST00000366707
)
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,395,861 - 228,566,575 (170,715)
query : 1 - 25,575 (25,575/25,575)
111 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11, nucl 7.5, pero 3.5,
mito_pero 3.5, plas 2.5, mito 2.5, extr_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214447)
HIX0214447
HIT000520061 (
ENST00000422127
)
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,395,861 - 228,566,575 (170,715)
query : 1 - 24,030 (24,030/24,030)
105 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11, nucl 7.5, plas 3.5,
extr_plas 3, mito_pero 3, mito 2.5, pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214447)
HIX0214447
HIT000347989 (
ENST00000366709
)
(Obscurin isoform a.)
genome : 228,395,861 - 228,548,456 (152,596)
query : 1 - 19,907 (19,907/19,907)
81 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14, cyto 7, mito 2.5, extr 2,
pero 2, E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214447)
HIX0214447
HIT000313102 (
ENST00000359599
)
(Obscurin; EC=2.7.11.1; Obscurin-RhoGEF; Obscurin-myosin light chain kinase; Obscurin-MLCK;)
genome : 228,444,351 - 228,492,160 (47,810)
query : 1 - 9,411 (9,411/9,411)
37 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 15, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214447)
HIX0001676
HIT000201322 (
NM_004578
)
(Ras-related protein Rab-4A;)
genome : 229,406,809 - 229,441,639 (34,831)
query : 1 - 3,034 (3,034/3,056)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.981;0.968;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10, mito 9, extr 6, nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001676)
HIX0001676
HIT000725178 (
NM_001271998
)
(Protein SPHAR; S-phase response protein;)
genome : 229,406,809 - 229,441,639 (34,831)
query : 1 - 2,800 (2,800/2,822)
6 exons
identity = 0.998
5'(1.000;1.000;0.975;0.968;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, cyto 6.5, cyto_mito 6.5, mito 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001676)
HIX0001676
HIT000727667 (
NR_073545
)
(Ras-related protein Rab-4A isoform 2.)
genome : 229,406,809 - 229,441,639 (34,831)
query : 1 - 2,996 (2,996/3,018)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.975;0.968;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 9, nucl 7, cyto 7, extr_plas 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001676)
HIX0001676
HIT000347970 (
ENST00000366690
)
(Ras-related protein Rab-4A;)
genome : 229,406,879 - 229,441,641 (34,763)
query : 1 - 2,966 (2,966/2,966)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.981;0.968;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10, mito 9, extr 6, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001676)
HIX0001676
HIT000031858
(
BC004309
)
(Ras-related protein Rab-4A;)
genome : 229,406,879 - 229,440,518 (33,640)
query : 1 - 1,843 (1,843/1,861)
8 exons
identity = 0.996
5'(0.996;1.000;1.000;1.000;0.981;0.968;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10, mito 9, extr 6, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001676)
HIX0001676
HIT000386109
(
AY585832
)
Representative transcript
(Ras-related protein Rab-4A;)
genome : 229,406,881 - 229,441,639 (34,759)
query : 1 - 2,964 (2,964/2,986)
8 exons
identity = 0.997
5'(0.996;1.000;1.000;1.000;0.981;0.968;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10, mito 9, extr 6, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001676)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK145452
Rattus
sp. (Rat) : BC062016
Danio
sp. (Zebrafish) : BC080219
Bos
sp. (Cow) : BC110198
Gallus
sp. (Chicken) : CR524370
Oryzias
sp. (Medaka) : ENSORLT00000008672
Pongo
sp. (Orangutan) : ENSPPYT00000000139
Tetraodon
sp. (Tetraodon) : GSTENT00032807001
Takifugu
sp. (Fugu) : SINFRUT00000158948
Macaca
sp. (Macaque) : XM_001082985
Monodelphis
sp. (Opossum) : XM_001379024
Equus
sp. (Horse) : XM_001497955
Canis
sp. (Dog) : XM_536353
Macaca
sp. (Macaque) : XR_012752
Pan
sp. (Chimpanzee) : XR_020740
HIX0001676
HIT000030892
(
BC002438
)
(Ras-related protein Rab-4A;)
genome : 229,407,016 - 229,440,155 (33,140)
query : 1 - 1,343 (1,343/1,369)
8 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;0.981;0.968;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10, mito 9, extr 6, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001676)
HIX0001676
HIT000330789
(
AK223009
)
(Ras-related protein Rab-4A;)
genome : 229,407,044 - 229,440,155 (33,112)
query : 1 - 1,315 (1,315/1,332)
8 exons
identity = 0.993
5'(1.000;0.988;0.991;1.000;0.981;0.968;1.000;
0.998)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10, mito 9, extr 6, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001676)
HIX0001676
HIT000317047 (
NM_006542
)
(Protein SPHAR; S-phase response protein;)
genome : 229,440,129 - 229,441,249 (1,121)
query : 1 - 1,121 (1,121/1,135)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, cyto 6.5, cyto_mito 6.5, mito 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001676)
HIX0001676
HIT000338814
(
BC107681
)
(Protein SPHAR; S-phase response protein;)
genome : 229,440,129 - 229,441,249 (1,121)
query : 1 - 1,121 (1,121/1,135)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, cyto 6.5, cyto_mito 6.5, mito 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001676)
HIX0001676
HIT000347968 (
ENST00000366688
)
(Protein SPHAR; S-phase response protein;)
genome : 229,440,129 - 229,441,248 (1,120)
query : 1 - 1,120 (1,120/1,120)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, cyto 6.5, cyto_mito 6.5, mito 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001676)
HIX0001677
HIT000264438
(
BC071609
)
(Centriole, cilia and spindle-associated protein;)
genome : 229,456,760 - 229,478,735 (21,976)
query : 1 - 5,159 (5,159/5,174)
4 exons
identity = 0.999
3'(0.999;0.996;0.998;0.987)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 5, extr 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001677)
HIX0001677
HIT000213163 (
NM_145257
)
(Centriole, cilia and spindle-associated protein;)
genome : 229,456,752 - 229,478,688 (21,937)
query : 1 - 5,121 (5,121/5,121)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 5, extr 3, mito_nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001677)
HIX0001677
HIT000347967 (
ENST00000366687
)
(Centriole, cilia and spindle-associated protein;)
genome : 229,456,758 - 229,478,264 (21,507)
query : 1 - 5,089 (5,089/5,089)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 5, extr 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001677)
HIX0001677
HIT000112510 (
ENST00000284617
)
(Centriole, cilia and spindle-associated protein;)
genome : 229,456,763 - 229,478,735 (21,973)
query : 1 - 5,157 (5,157/5,157)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 5, extr 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001677)
HIX0001677
HIT000260079
(
BC060777
)
(Centriole, cilia and spindle-associated protein;)
genome : 229,459,286 - 229,479,041 (19,756)
query : 1 - 3,492 (3,492/3,507)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9, cyto 8, cyto_nucl 8, extr 7, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001677)
HIX0001677
HIT000586998 (
ENST00000483092
)
(Centriole, cilia and spindle-associated protein;)
genome : 229,459,286 - 229,479,041 (19,756)
query : 1 - 3,492 (3,492/3,492)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9, cyto 8, cyto_nucl 8, extr 7, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001677)
HIX0001677
HIT000037118
(
BC015419
)
Representative transcript
(Centriole, cilia and spindle-associated protein;)
genome : 229,460,214 - 229,478,264 (18,051)
query : 1 - 1,633 (1,633/1,649)
3 exons
identity = 0.999
3'(1.000;1.000;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 5, extr 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001677)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC036300
Danio
sp. (Zebrafish) : BC063997
Macaca
sp. (Macaque) : ENSMMUT00000024907
Oryzias
sp. (Medaka) : ENSORLT00000013623
Rattus
sp. (Rat) : ENSRNOT00000023911
Takifugu
sp. (Fugu) : SINFRUT00000158949
Pan
sp. (Chimpanzee) : XM_001146289
Monodelphis
sp. (Opossum) : XM_001379034
Gallus
sp. (Chicken) : XM_419574
Bos
sp. (Cow) : XM_611981
Canis
sp. (Dog) : XM_843876
HIX0001677
HIT000424234
(
AK291437
)
(Centriole, cilia and spindle-associated protein;)
genome : 229,460,824 - 229,478,251 (17,428)
query : 1 - 1,010 (1,010/1,010)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 5, extr 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001677)
HIX0001677
HIT000550486 (
ENST00000452552
)
(Centriole, cilia and spindle-associated protein.)
genome : 229,463,283 - 229,478,264 (14,982)
query : 1 - 442 (442/442)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 13.5, cyto 9.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001677)
HIX0001660
pHIT000003527 ( pHIT000003527 )
(39S ribosomal protein L55, mitochondrial; L55mt; MRP-L55; Precursor;)
genome : 228,294,461 - 228,297,036 (2,576)
query : 1 - 324 (324/324)
3 exons
InterPro :
IPR018615 : Ribosomal protein L55, mitochondrial
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001660)
CAGE tag :
H06BA20E0205,H08BA62F0204,H10BA97B0803
H11BA27B2011,H21BA02J1509
HIX0178052
pHIT000099091 ( pHIT000099091 )
Representative transcript
(Conserved hypothetical protein.)
genome : 228,651,945 - 228,652,295 (351)
query : 1 - 351 (351/351)
1 exon
InterPro :
IPR000558 : Histone H2B
IPR007125 : Histone core
IPR009072 : Histone-fold
GO :
0000786 : Cellular Component : nucleosome
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
0046982 : Molecular Function : protein heterodimerization activity
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178052)
CAGE tag :
T01F0D82B890
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK018765
Canis
sp. (Dog) : ENSCAFT00000037582
Equus
sp. (Horse) : ENSECAT00000004417
Tetraodon
sp. (Tetraodon) : GSTENT00001940001
Rattus
sp. (Rat) : XM_001076753
Macaca
sp. (Macaque) : XM_001081967
Pan
sp. (Chimpanzee) : XM_525086
HIX0203471
eHIT000012180 ( ESTsASS_1_2186 )
Representative transcript
(Non-protein coding transcript.)
genome : 229,158,520 - 229,174,021 (15,502)
query : 1 - 659 (659/659)
4 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203471)
ESTs used for assembly :
BX956548
AL731702.12
228000001-228009107 F +
NCBI
AL356323.15
228009108-228043110 F +
NCBI
AL360269.21
228043111-228182813 F +
NCBI
AL136379.19
228182814-228308629 F -
NCBI
AL359510.24
228308630-228402374 F +
NCBI
AL353593.33
228402375-228536338 F +
NCBI
AL670729.19
228536339-228596502 F +
NCBI
AL139288.15
228596503-228744111 F -
NCBI
AL713899.14
228744112-228800030 F +
NCBI
AL096776.12
228800031-228888774 F +
NCBI
AL078624.24
228888775-229016313 F +
NCBI
AL359874.9
229016314-229096159 F +
NCBI
AL137793.16
229096160-229234478 F +
NCBI
BX321878.4
229234479-229293199 F +
NCBI
AL772177.2
229293200-229299025 F -
NCBI
AL162595.17
229299026-229412049 F +
NCBI
AL117350.12
229412050-229516490 F +
NCBI
AL160004.18
229516491-229600000 F +
NCBI