Clickable map CGI

HIX0161002
HIT000536725 ( ENST00000438791 )
  (Non-protein coding transcript.)
  genome : 4,611,795 - 4,612,205 (411)
  query : 1 - 356 (356/356)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0161002)

HIX0160461
HIT000518456 ( ENST00000420522 )
  (Hypothetical short protein.)
  genome : 4,631,608 - 4,643,481 (11,874)
  query : 1 - 682 (682/682)
  5 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 14.5, cyto_nucl 10, extr 6, cysk 5, nucl 4.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0160461)

HIX0179991
pHIT000000254 ( pHIT000000254 )
  Representative transcript
  (Hypothetical short protein.)
  genome : 4,714,433 - 4,717,140 (2,708)
  query : 1 - 204 (204/204)
  2 exons
  SOSUI :
    SOLUBLE PROTEIN
  JIGSAW prediction
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0179991)
  CAGE tag :
    H08BA39I0806

HIX0028526
HIT000072628 ( AF175409 )
  (Adherens junction-associated protein 1; Membrane protein shrew-1;)
  genome : 4,714,792 - 4,843,249 (128,458)
  query : 1 - 2,633 (2,633/2,633)
  6 exons
  identity = 1.000
  5'(0.999;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR029198 : AJAP1/PANP, C-terminal
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 12, extr 9, mito 5, E.R. 3, mito_nucl 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0028526)

HIX0028526
HIT000359470 ( ENST00000378190 )
  (Adherens junction-associated protein 1; Membrane protein shrew-1;)
  genome : 4,714,792 - 4,837,854 (123,063)
  query : 1 - 2,383 (2,383/2,383)
  6 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 12, extr 9, mito 5, E.R. 3, mito_nucl 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0028526)

HIX0028526
HIT000207419 ( NM_018836 )
  (Adherens junction-associated protein 1; Membrane protein shrew-1;)
  genome : 4,715,105 - 4,843,851 (128,747)
  query : 1 - 2,923 (2,923/2,923)
  6 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 12, extr 9, mito 5, E.R. 3, mito_nucl 3
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0028526)

HIX0028526
HIT000359471 ( ENST00000378191 )
  (Adherens junction-associated protein 1; Membrane protein shrew-1;)
  genome : 4,715,105 - 4,843,850 (128,746)
  query : 1 - 2,922 (2,922/2,922)
  6 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 12, extr 9, mito 5, E.R. 3, mito_nucl 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0028526)

HIX0028526
HIT000397540 ( NM_001042478 )
  (Adherens junction-associated protein 1; Membrane protein shrew-1;)
  genome : 4,715,105 - 4,837,854 (122,750)
  query : 1 - 2,070 (2,070/2,070)
  6 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 12, extr 9, mito 5, E.R. 3, mito_nucl 3
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0028526)

HIX0028526
HIT000571392 ( ENST00000466761 )
  (Adherens junction-associated protein 1 precursor.)
  genome : 4,771,215 - 4,772,225 (1,011)
  query : 1 - 298 (298/298)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    mito 20, extr 8, cyto 2, pero 2, cyto_pero 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0028526)

HIX0028526
HIT000250066 ( AL049672 )
  (Adherens junction-associated protein 1 precursor.)
  genome : 4,772,465 - 4,843,080 (70,616)
  query : 1 - 1,237 (1,237/1,237)
  5 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR029198 : AJAP1/PANP, C-terminal
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 24, mito 3.5, cyto_mito 3, E.R. 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0028526)

HIX0028526
HIT000250067 ( AL049673 )
  (Adherens junction-associated protein 1 precursor.)
  genome : 4,772,465 - 4,837,854 (65,390)
  query : 1 - 1,155 (1,155/1,155)
  5 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR029198 : AJAP1/PANP, C-terminal
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 24, mito 3.5, cyto_mito 3, E.R. 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0028526)

HIX0028526
HIT000064338 ( AF052143 )
  (Adherens junction-associated protein 1 precursor.)
  genome : 4,832,507 - 4,843,851 (11,345)
  query : 1 - 1,460 (1,460/1,490)
  3 exons
  identity = 0.996
  5'(1.000;1.000;0.995)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 25, extr 5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0028526)

HIX0028526
HIT000096819 ( BC041648 )
  (Activating molecule in BECN1-regulated autophagy protein 1 isoform 1.)
  genome : 4,837,421 - 4,840,192 (2,772)
  query : 1 - 2,766 (2,766/2,783)
  1 exon
  identity = 0.992
  5'(0.992)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 14, nucl 10.5, cyto_nucl 7.5, mito 6
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0028526)

HIX0028525
HIT000306890 ( CR936609 )
  (Conserved hypothetical protein.)
  genome : 4,846,820 - 4,852,177 (5,358)
  query : 1 - 5,363 (5,363/5,381)
  1 exon
  identity = 0.999
  5'(0.999)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 16, extr 11, cyto 5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0028525)

HIX0028525
HIT000094794 ( BC037321 )
  Representative transcript
  (Hypothetical protein.)
  genome : 4,849,637 - 4,852,581 (2,945)
  query : 1 - 2,951 (2,951/2,966)
  1 exon
  identity = 0.995
  5'(0.995)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 15, cyto_nucl 14.5, nucl 10, golg 3, mito 1.5,
    E.R._mito 1.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0028525)

HIX0028525
HIT000064304 ( AF052109 )
  (Hypothetical protein.)
  genome : 4,849,693 - 4,852,183 (2,491)
  query : 1 - 2,478 (2,478/2,495)
  1 exon
  identity = 0.993
  5'(0.993)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    cyto 9, plas 6, extr 5, cyto_golg 5, nucl 4, mito 3.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0028525)

HIX0161151
HIT000541204 ( ENST00000443270 )
  (Conserved hypothetical protein.)
  genome : 5,146,519 - 5,150,959 (4,441)
  query : 1 - 449 (449/449)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 13, cyto_nucl 12, nucl 10.5, cyto 8.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0161151)

HIX0029338
HIT000097257 ( BC042499 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 5,553,038 - 5,554,732 (1,695)
  query : 1 - 1,696 (1,696/1,783)
  1 exon
  identity = 0.999
  5'(0.999)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 20, extr 11
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0029338)

HIX0029338
HIT000677389 ( ENST00000564261 )
  (Hypothetical protein.)
  genome : 5,553,038 - 5,554,734 (1,697)
  query : 1 - 1,697 (1,697/1,697)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 29.5, mito_nucl 15.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0029338)

HIX0028027
HIT000044951 ( AK125078 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 5,621,769 - 5,728,315 (106,547)
  query : 1 - 847 (847/847)
  3 exons
  identity = 1.000
  3'(1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 14.5, extr 11, cyto_nucl 11, cyto 6.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0028027)

HIX0214056
HIT000691807 ( ENST00000579887 )
  (Non-protein coding transcript.)
  genome : 5,624,131 - 5,624,203 (73)
  query : 1 - 73 (73/73)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0214056)

HIX0214056
HIT000725675 ( NR_039612 )
  (Non-protein coding transcript.)
  genome : 5,624,131 - 5,624,203 (73)
  query : 1 - 73 (73/73)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0214056)

HIX0028027
HIT000511821 ( ENST00000413887 )
  (Hypothetical short protein.)
  genome : 5,647,428 - 5,728,355 (80,928)
  query : 1 - 363 (363/363)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 20, cyto 8.5, cyto_nucl 6
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0028027)

HIX0029294
HIT000095795 ( BC039532 )
  Representative transcript
  (Hypothetical protein.)
  genome : 5,768,234 - 5,772,225 (3,992)
  query : 1 - 1,062 (1,062/1,116)
  2 exons
  identity = 0.999
  3'(1.000;0.994)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 24, nucl 4, mito 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0029294)

HIX0214068
HIT000694408 ( ENST00000582517 )
  (Non-protein coding transcript.)
  genome : 5,922,732 - 5,922,801 (70)
  query : 1 - 70 (70/70)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0214068)

HIX0214068
HIT000725901 ( NR_039838 )
  (Non-protein coding transcript.)
  genome : 5,922,732 - 5,922,801 (70)
  query : 1 - 70 (70/70)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0214068)

HIX0000071
HIT000205302 ( NM_015102 )
  (Nephrocystin-4; Nephroretinin;)
  genome : 5,922,870 - 6,052,533 (129,664)
  query : 1 - 5,004 (5,004/5,022)
  30 exons
  identity = 0.998
  3'(1.000;1.000;1.000;1.000;1.000;1.000;0.975;
      1.000;1.000;1.000;0.981;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 22.5, cyto_nucl 15.5, cyto 7.5
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000071)

HIX0000071
HIT000091635 ( BC028627 )
  (Nephrocystin-4; Nephroretinin;)
  genome : 5,922,871 - 5,927,712 (4,842)
  query : 4 - 3,969 (3,966/3,986)
  3 exons
  identity = 1.000
  3'(1.000;1.000;1.000)5'
  coverage = 0.999
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 19, cyto 8, nucl 4, cyto_pero 4, cyto_plas 4,
    cyto_golg 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000071)

HIX0000071
HIT000053394 ( BC050076 )
  (Nephrocystin-4; Nephroretinin;)
  genome : 5,922,871 - 5,927,710 (4,840)
  query : 1 - 3,964 (3,964/3,981)
  3 exons
  identity = 1.000
  3'(1.000;1.000;1.000)5'
  coverage = 0.999
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 19, cyto 8, nucl 4, cyto_pero 4, cyto_plas 4,
    cyto_golg 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000071)

HIX0000071
HIT000052412 ( BC040520 )
  (Nephrocystin-4; Nephroretinin;)
  genome : 5,922,873 - 6,052,533 (129,661)
  query : 2 - 5,549 (5,548/5,567)
  33 exons
  identity = 0.998
  3'(1.000;1.000;0.994;1.000;1.000;1.000;0.975;
      1.000;1.000;1.000;0.977;1.000;0.995;0.997;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000)5'
  coverage = 0.999
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 19.5, cyto_nucl 14, cyto 7.5, mito 5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000071)

HIX0000071
HIT000088659 ( BC015402 )
  (Nephrocystin-4; Nephroretinin;)
  genome : 5,922,877 - 5,924,513 (1,637)
  query : 1 - 1,333 (1,333/1,352)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 21, cyto 5.5, cyto_nucl 4.5, mito 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000071)

HIX0000071
HIT000084493 ( AY118228 )
  (Nephrocystin-4; Nephroretinin;)
  genome : 5,922,870 - 6,052,468 (129,599)
  query : 1 - 4,939 (4,939/4,939)
  30 exons
  identity = 0.998
  3'(1.000;1.000;1.000;1.000;1.000;1.000;0.975;
      1.000;1.000;1.000;0.976;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      0.994;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 22.5, cyto_nucl 15.5, cyto 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000071)

HIX0000071
HIT000043947 ( AK124074 )
  (Nephrocystin-4; Nephroretinin;)
  genome : 5,922,871 - 6,052,484 (129,614)
  query : 3 - 4,469 (4,467/4,469)
  26 exons
  identity = 0.998
  3'(1.000;1.000;1.000;1.000;1.000;1.000;0.975;
      0.988;1.000;1.000;0.976;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 14.5, mito 11, cyto_nucl 11, cyto 6.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000071)

HIX0000071
HIT000582530 ( ENST00000478423 )
  (Nephrocystin-4; Nephroretinin;)
  genome : 5,922,871 - 6,052,484 (129,614)
  query : 1 - 4,467 (4,467/4,467)
  26 exons
  identity = 0.998
  3'(1.000;1.000;1.000;1.000;1.000;1.000;0.975;
      1.000;1.000;1.000;0.981;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 13.5, mito 11, cyto_nucl 11, cyto 7.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000071)

HIX0000071
HIT000047206 ( AK127333 )
  (Nephrocystin-4; Nephroretinin;)
  genome : 5,922,871 - 5,928,435 (5,565)
  query : 1 - 4,370 (4,370/4,370)
  3 exons
  identity = 0.999
  3'(0.999;1.000;0.994)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11.5, cyto_mito 10.1667, cyto_nucl 9, nucl 7.5,
    cyto 7, cyto_pero 5.83333, extr 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000071)

HIX0000071
HIT000359441 ( ENST00000378161 )
  (Nephrocystin-4; Nephroretinin;)
  genome : 5,922,871 - 5,928,435 (5,565)
  query : 1 - 4,370 (4,370/4,370)
  3 exons
  identity = 0.999
  3'(1.000;1.000;0.994)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11.5, cyto_mito 10.1667, cyto_nucl 9, nucl 7.5,
    cyto 7, cyto_pero 5.83333, extr 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000071)

HIX0000071
HIT000565613 ( ENST00000460696 )
  (Nephrocystin-4; Nephroretinin;)
  genome : 5,922,871 - 5,927,712 (4,842)
  query : 1 - 3,967 (3,967/3,967)
  3 exons
  identity = 1.000
  3'(1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 19, cyto 8, nucl 4, cyto_pero 4, cyto_plas 4,
    cyto_golg 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000071)

HIX0000071
HIT000592795 ( ENST00000489180 )
  (Nephrocystin-4; Nephroretinin;)
  genome : 5,922,873 - 6,052,533 (129,661)
  query : 1 - 5,548 (5,548/5,548)
  33 exons
  identity = 0.999
  3'(1.000;1.000;1.000;1.000;1.000;1.000;0.975;
      1.000;1.000;1.000;0.977;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 19.5, cyto_nucl 14, cyto 7.5, mito 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000071)

HIX0000071
HIT000081438 ( AF537130 )
  Representative transcript
  (Nephrocystin-4; Nephroretinin;)
  genome : 5,922,878 - 6,052,531 (129,654)
  query : 1 - 4,994 (4,994/4,994)
  30 exons
  identity = 0.998
  3'(1.000;1.000;1.000;1.000;1.000;1.000;0.975;
      1.000;1.000;1.000;0.976;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 22.5, cyto_nucl 15.5, cyto 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000071)
  Ortholog candidate  ( -> Evola )
    Macaca sp. (Macaque) : AB171918
    Mus sp. (Mouse) : AK038879
    Rattus sp. (Rat) : BC107905
    Gallus sp. (Chicken) : CR338722
    Monodelphis sp. (Opossum) : ENSMODT00000008148
    Pongo sp. (Orangutan) : ENSPPYT00000002337
    Canis sp. (Dog) : EU659993
    Tetraodon sp. (Tetraodon) : GSTENT00020637001
    Takifugu sp. (Fugu) : SINFRUT00000161468
    Equus sp. (Horse) : XM_001497162
    Danio sp. (Zebrafish) : XM_001921531
    Bos sp. (Cow) : XM_609360
    Pan sp. (Chimpanzee) : XR_024323

HIX0000071
HIT000359436 ( ENST00000378156 )
  (Nephrocystin-4; Nephroretinin;)
  genome : 5,922,878 - 6,052,531 (129,654)
  query : 1 - 4,994 (4,994/4,994)
  30 exons
  identity = 0.998
  3'(1.000;1.000;1.000;1.000;1.000;1.000;0.975;
      1.000;1.000;1.000;0.981;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 22.5, cyto_nucl 15.5, cyto 7.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000071)

HIX0000071
HIT000000398 ( AB014573 )
  (Nephrocystin-4; Nephroretinin;)
  genome : 5,922,878 - 6,021,894 (99,017)
  query : 1 - 4,096 (4,096/4,096)
  25 exons
  identity = 0.998
  3'(1.000;1.000;1.000;1.000;1.000;1.000;0.975;
      1.000;1.000;1.000;0.976;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 14.5, cyto_mito 13.1667, cyto 10.5,
    cyto_nucl 9.83333, nucl 7
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000071)

HIX0000071
HIT000359449 ( ENST00000378169 )
  (Nephrocystin-4; Nephroretinin;)
  genome : 5,923,325 - 6,052,507 (129,183)
  query : 1 - 4,213 (4,213/4,213)
  27 exons
  identity = 0.998
  3'(1.000;1.000;1.000;1.000;1.000;1.000;0.975;
      1.000;1.000;1.000;0.981;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 12, cyto 7, cyto_nucl 6.33333, mito 6,
    extr_plas 6, cyto_pero 5.33333, mito_nucl 5.33333
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000071)

HIX0000071
HIT000433192 ( AK314326 )
  (Nephrocystin-4; Nephroretinin;)
  genome : 5,923,325 - 6,052,507 (129,183)
  query : 1 - 4,213 (4,213/4,213)
  27 exons
  identity = 0.998
  3'(1.000;1.000;1.000;1.000;0.988;1.000;0.975;
      1.000;1.000;1.000;0.981;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 12, cyto 7, cyto_nucl 6.33333, mito 6,
    extr_plas 6, cyto_pero 5.33333, mito_nucl 5.33333
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000071)

HIX0000071
HIT000572830 ( ENST00000468253 )
  (Nephrocystin-4; Nephroretinin;)
  genome : 5,927,142 - 5,933,901 (6,760)
  query : 1 - 781 (781/781)
  3 exons
  identity = 0.995
  3'(1.000;0.975;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 14, cyto 8.5, cyto_nucl 8.5, nucl 7.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000071)

HIX0000071
HIT000606975 ( ENST00000506941 )
  (Nephrocystin-4; Nephroretinin;)
  genome : 5,934,965 - 5,937,526 (2,562)
  query : 1 - 570 (570/570)
  2 exons
  identity = 0.993
  3'(1.000;0.989)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 24.5, cyto_nucl 15.5, cyto 5.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000071)

HIX0000071
HIT000048055 ( AK128182 )
  (Nephrocystin-4; Nephroretinin;)
  genome : 5,936,939 - 5,942,909 (5,971)
  query : 1 - 3,156 (3,156/3,156)
  2 exons
  identity = 0.997
  3'(0.995;0.997)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 23, cyto_nucl 14, extr 5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000071)

HIX0000071
HIT000575223 ( ENST00000470763 )
  (Nephrocystin-4; Nephroretinin;)
  genome : 5,936,939 - 5,942,909 (5,971)
  query : 1 - 3,156 (3,156/3,156)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 23, cyto_nucl 14, extr 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000071)

HIX0000071
HIT000024567 ( AL117405 )
  (Nephrocystin-4; Nephroretinin;)
  genome : 5,946,556 - 5,965,384 (18,829)
  query : 3 - 1,193 (1,191/1,202)
  6 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 0.998
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 18, extr 7, cyto 4, cyto_nucl 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000071)

HIX0000071
HIT000571526 ( ENST00000466897 )
  (Nephrocystin-4; Nephroretinin;)
  genome : 5,946,555 - 5,965,384 (18,830)
  query : 1 - 1,192 (1,192/1,192)
  6 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 14, extr 11, cyto 3.5, cyto_nucl 3, pero 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000071)

HIX0023526
HIT000359391 ( ENST00000378111 )
  (Voltage-gated potassium channel subunit beta-2; K(+) channel subunit beta-2; Kv-beta-2; hKvbeta2;)
  genome : 6,051,526 - 6,160,235 (108,710)
  query : 1 - 822 (822/822)
  8 exons
  identity = 0.994
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 13, cyto_nucl 9.66667, nucl 8, cyto 7,
    cyto_pero 6.33333
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023526)

HIX0023526
HIT000656695 ( NM_001199861 )
  (Voltage-gated potassium channel subunit beta-2; K(+) channel subunit beta-2; Kv-beta-2; hKvbeta2;)
  genome : 6,052,358 - 6,161,253 (108,896)
  query : 1 - 4,266 (4,266/4,282)
  16 exons
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 20, cyto 5, nucl 3, pero 3
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023526)

HIX0023526
HIT000359377 ( ENST00000378097 )
  (Voltage-gated potassium channel subunit beta-2; K(+) channel subunit beta-2; Kv-beta-2; hKvbeta2;)
  genome : 6,052,423 - 6,161,253 (108,831)
  query : 1 - 4,201 (4,201/4,201)
  16 exons
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 20, cyto 5, nucl 3, pero 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023526)

HIX0023526
HIT000597231 ( ENST00000493807 )
  (Hypothetical short protein.)
  genome : 6,052,733 - 6,067,720 (14,988)
  query : 1 - 560 (560/560)
  3 exons
  identity = 1.000
  5'(1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 18, cyto 6, cyto_nucl 5.66667, cyto_pero 4.66667,
    mito 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023526)

HIX0023526
HIT000359372 ( ENST00000378092 )
  (Voltage-gated potassium channel subunit beta-2; K(+) channel subunit beta-2; Kv-beta-2; hKvbeta2;)
  genome : 6,052,761 - 6,158,634 (105,874)
  query : 1 - 1,202 (1,202/1,202)
  15 exons
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17, cyto_nucl 16, nucl 7, pero 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023526)

HIX0023526
HIT000582216 ( ENST00000478098 )
  (Voltage-gated potassium channel subunit beta-2; K(+) channel subunit beta-2; Kv-beta-2; hKvbeta2;)
  genome : 6,052,766 - 6,133,907 (81,142)
  query : 1 - 413 (413/413)
  5 exons
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 15, nucl 8, cyto_nucl 7.16667, cyto_pero 4.16667,
    cyto 4, extr 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023526)

HIX0023526
HIT000543435 ( ENST00000445501 )
  (Voltage-gated potassium channel subunit beta-2; K(+) channel subunit beta-2; Kv-beta-2; hKvbeta2;)
  genome : 6,052,771 - 6,132,850 (80,080)
  query : 1 - 486 (486/486)
  5 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 13, nucl 10.5, cyto_nucl 7.5, mito 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023526)

HIX0023526
HIT000200447 ( NM_003636 )
  (Voltage-gated potassium channel subunit beta-2; K(+) channel subunit beta-2; Kv-beta-2; hKvbeta2;)
  genome : 6,086,073 - 6,161,253 (75,181)
  query : 1 - 4,208 (4,208/4,224)
  16 exons
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 20, cyto 5, nucl 3, pero 3
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023526)

HIX0023526
HIT000214650 ( NM_172130 )
  (Voltage-gated potassium channel subunit beta-2; K(+) channel subunit beta-2; Kv-beta-2; hKvbeta2;)
  genome : 6,086,073 - 6,161,253 (75,181)
  query : 1 - 4,166 (4,166/4,182)
  15 exons
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17, cyto_nucl 16, nucl 7, pero 4
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023526)

HIX0023526
HIT000526095 ( ENST00000428161 )
  (Voltage-gated potassium channel subunit beta-2; K(+) channel subunit beta-2; Kv-beta-2; hKvbeta2;)
  genome : 6,086,360 - 6,155,685 (69,326)
  query : 1 - 961 (961/961)
  12 exons
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 16, cyto 15.5, nucl 7.5, mito 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023526)

HIX0023526
HIT000396540 ( ENST00000389632 )
  (Voltage-gated potassium channel subunit beta-2; K(+) channel subunit beta-2; Kv-beta-2; hKvbeta2;)
  genome : 6,086,360 - 6,155,641 (69,282)
  query : 1 - 959 (959/959)
  13 exons
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 19, cyto_nucl 5.5, nucl 5, cyto 4, pero 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023526)

HIX0023526
HIT000134154 ( ENST00000341524 )
  (Voltage-gated potassium channel subunit beta-2; K(+) channel subunit beta-2; Kv-beta-2; hKvbeta2;)
  genome : 6,086,380 - 6,160,523 (74,144)
  query : 1 - 3,171 (3,171/3,171)
  16 exons
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 20, cyto 5, nucl 3, pero 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023526)

HIX0023526
HIT000308261 ( ENST00000352527 )
  (Voltage-gated potassium channel subunit beta-2; K(+) channel subunit beta-2; Kv-beta-2; hKvbeta2;)
  genome : 6,086,380 - 6,160,523 (74,144)
  query : 1 - 3,129 (3,129/3,129)
  15 exons
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17, cyto_nucl 16, nucl 7, pero 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023526)

HIX0023526
HIT000359367 ( ENST00000378087 )
  (Voltage-gated potassium channel subunit beta-2; K(+) channel subunit beta-2; Kv-beta-2; hKvbeta2;)
  genome : 6,086,380 - 6,160,078 (73,699)
  query : 1 - 700 (700/700)
  8 exons
  identity = 0.994
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 14, cyto_nucl 8.66667, mito_pero 8.66667, nucl 8,
    cyto_pero 5.33333
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023526)

HIX0023526
HIT000714345 ( ENST00000602612 )
  (Voltage-gated potassium channel subunit beta-2; K(+) channel subunit beta-2; Kv-beta-2; hKvbeta2;)
  genome : 6,086,380 - 6,158,621 (72,242)
  query : 1 - 2,396 (2,396/2,396)
  15 exons
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 13, nucl 8, pero 7, cyto_pero 6, cyto 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023526)

HIX0023526
HIT000533871 ( ENST00000435937 )
  (Voltage-gated potassium channel subunit beta-2; K(+) channel subunit beta-2; Kv-beta-2; hKvbeta2;)
  genome : 6,087,357 - 6,145,309 (57,953)
  query : 1 - 500 (500/500)
  6 exons
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 14.5, cyto_nucl 11.5, mito 10, nucl 3.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023526)

HIX0023526
HIT000102481 ( ENST00000164247 )
  (Voltage-gated potassium channel subunit beta-2; K(+) channel subunit beta-2; Kv-beta-2; hKvbeta2;)
  genome : 6,094,343 - 6,161,239 (66,897)
  query : 1 - 4,273 (4,273/4,273)
  16 exons
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 20, cyto 5, nucl 3, pero 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023526)

HIX0023526
HIT000656694 ( NM_001199860 )
  (Voltage-gated potassium channel subunit beta-2; K(+) channel subunit beta-2; Kv-beta-2; hKvbeta2;)
  genome : 6,094,348 - 6,161,253 (66,906)
  query : 1 - 4,282 (4,282/4,298)
  16 exons
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 20, cyto 5, nucl 3, pero 3
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023526)

HIX0023526
HIT000564777 ( ENST00000459822 )
  (Hypothetical short protein.)
  genome : 6,095,977 - 6,101,822 (5,846)
  query : 1 - 856 (856/856)
  3 exons
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 18, cyto 8.5, cyto_nucl 8.5, nucl 5.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023526)

bases per tick : kb first site :
main : All Human Genes JIGSAW prediction ESTs assembly
homology : UCSC CCDS Pseudogene.org Conserved regions ( Segmental duplication P.troglodytes P.abelii M.mulatta M.musculus R.norvegicus C.familiaris E.caballus B.taurus M.domestica G.gallus D.rerio O.latipes T.nigroviridis T.rubripes )
gene prediction : FGENESH GenScan HMMgene tRNA
show... : SNPs ESTs(summary) ESTs(detail) CAGE tag(summary) CAGE tag(detail)
sequence viewer : = ( , )