bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0035333
HIT000075748
(
AF269087
)
Representative transcript
(Ankyrin repeat domain-containing protein 30A; Serologically defined breast cancer antigen NY-BR-1;)
genome : 37,414,785 - 37,536,814 (122,030)
query : 1 - 4,458 (4,458/4,458)
37 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;0.796)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 16, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035333)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001143833
HIX0035333
HIT000714266 (
ENST00000602533
)
(Ankyrin repeat domain-containing protein 30A.)
genome : 37,414,785 - 37,536,814 (122,030)
query : 1 - 4,458 (4,458/4,458)
37 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.868)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 16, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035333)
HIX0035333
HIT000211574 (
NM_052997
)
(Ankyrin repeat domain-containing protein 30A.)
genome : 37,414,785 - 37,521,495 (106,711)
query : 1 - 4,405 (4,405/4,405)
36 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 16, cyto 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035333)
HIX0035333
HIT000314968 (
ENST00000361713
)
(Ankyrin repeat domain-containing protein 30A.)
genome : 37,414,785 - 37,521,495 (106,711)
query : 1 - 4,405 (4,405/4,405)
36 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 16, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035333)
HIX0035333
HIT000355940 (
ENST00000374660
)
(Ankyrin repeat domain-containing protein 30A; Serologically defined breast cancer antigen NY-BR-1;)
genome : 37,414,785 - 37,521,495 (106,711)
query : 1 - 4,762 (4,762/4,762)
42 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 16, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035333)
HIX0170938
HIT000534011 (
ENST00000436077
)
(Hypothetical short protein.)
genome : 37,529,815 - 37,530,977 (1,163)
query : 1 - 335 (335/335)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170938)
HIX0170376
HIT000518387 (
ENST00000420453
)
(Conserved hypothetical protein.)
genome : 37,537,046 - 37,604,729 (67,684)
query : 1 - 540 (540/540)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, cyto 8, E.R._mito 5.66667, mito 4,
cyto_nucl 4, mito_pero 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170376)
HIX0219032
HIT000594281 (
ENST00000490735
)
(Hypothetical short protein.)
genome : 37,586,326 - 37,586,615 (290)
query : 1 - 290 (290/290)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12.5, cyto 9, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219032)
HIX0170376
HIT000524405 (
ENST00000426471
)
(Hypothetical short protein.)
genome : 37,598,113 - 37,635,954 (37,842)
query : 1 - 652 (652/652)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, mito 10, cyto 9.5, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170376)
HIX0170376
HIT000533563 (
ENST00000435629
)
(Hypothetical short protein.)
genome : 37,600,084 - 37,635,838 (35,755)
query : 1 - 425 (425/425)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 10.5, extr 8, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170376)
HIX0171239
HIT000555322 (
ENST00000457388
)
(Transmembrane protein 161A/B family protein.)
genome : 37,626,343 - 37,627,799 (1,457)
query : 1 - 1,457 (1,457/1,457)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 7.5, extr 5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171239)
HIX0170842
HIT000527470 (
ENST00000429536
)
(Vomeronasal receptor, type 1 family protein.)
genome : 37,637,544 - 37,638,500 (957)
query : 1 - 957 (957/957)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170842)
HIX0170777
HIT000523428 (
ENST00000425494
)
(Conserved hypothetical protein.)
genome : 37,811,939 - 37,833,629 (21,691)
query : 1 - 1,454 (1,454/1,454)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170777)
HIX0171107
HIT000546125 (
ENST00000448191
)
(NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H family protein.)
genome : 37,889,724 - 37,890,296 (573)
query : 1 - 573 (573/573)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 17, extr 5, mito_pero 3.66667, mito 3.5,
extr_plas 3.5, E.R._mito 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171107)
HIX0209358
HIT000643869 (
ENST00000544824
)
(Humanin family protein.)
genome : 37,890,366 - 37,891,859 (1,494)
query : 1 - 1,494 (1,494/1,494)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209358)
HIX0209358
HIT000655645 (
NM_001190489
)
(Humanin family protein.)
genome : 37,890,366 - 37,891,859 (1,494)
query : 1 - 1,494 (1,494/1,494)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209358)
HIX0025997
HIT000045411
(
AK125538
)
Representative transcript
(Conserved hypothetical protein.)
genome : 38,047,465 - 38,049,943 (2,479)
query : 1 - 2,479 (2,479/2,479)
1 exon
identity = 0.986
3'(0.986)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, plas 7, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025997)
HIX0008763
HIT000530464 (
ENST00000432530
)
(Conserved hypothetical protein.)
genome : 38,064,299 - 38,073,059 (8,761)
query : 1 - 712 (712/712)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14.6667, nucl 10.5,
cyto_plas 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008763)
HIX0008763
HIT000724557 (
NM_001267607
)
(Zinc finger protein 248 isoform 3.)
genome : 38,065,454 - 38,146,564 (81,111)
query : 1 - 957 (957/957)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 15, nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008763)
HIX0035806
HIT000220549
(
U58667
)
Representative transcript
(Hypothetical short protein.)
genome : 38,080,510 - 38,080,865 (356)
query : 5 - 369 (365/372)
1 exon
identity = 0.956
5'(0.956)3'
coverage = 0.981
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 13, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035806)
HIX0035806
HIT000677540 (
ENST00000564417
)
(Non-protein coding transcript.)
genome : 38,080,508 - 38,080,865 (358)
query : 1 - 358 (358/358)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035806)
HIX0171170
HIT000727340 (
NR_051997
)
(Conserved hypothetical protein.)
genome : 38,082,866 - 38,084,103 (1,238)
query : 1 - 1,238 (1,238/1,238)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171170)
HIX0171170
HIT000550431 (
ENST00000452497
)
(Conserved hypothetical protein.)
genome : 38,083,204 - 38,085,037 (1,834)
query : 1 - 1,834 (1,834/1,834)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171170)
HIX0008763
HIT000435612
(
BC146820
)
Representative transcript
(Zinc finger protein 248 isoform 2.)
genome : 38,090,447 - 38,146,979 (56,533)
query : 1 - 2,908 (2,908/2,924)
7 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 16, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008763)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AY724530
Mus
sp. (Mouse) : BC082571
Pongo
sp. (Orangutan) : CR857488
Equus
sp. (Horse) : ENSECAT00000008689
Monodelphis
sp. (Opossum) : ENSMODT00000030803
Pan
sp. (Chimpanzee) : ENSPTRT00000004501
Macaca
sp. (Macaque) : XM_001095695
Bos
sp. (Cow) : XM_001253070
Canis
sp. (Dog) : XM_843150
HIX0008763
HIT000090469
(
BC021819
)
(Zinc finger protein 248 isoform 2.)
genome : 38,091,763 - 38,146,479 (54,717)
query : 1 - 1,694 (1,694/1,708)
7 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;0.992;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15, nucl 6.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008763)
HIX0008763
HIT000589358 (
ENST00000485560
)
(Zinc finger protein 248 isoform 2.)
genome : 38,091,751 - 38,146,479 (54,729)
query : 1 - 1,705 (1,705/1,705)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15, nucl 6.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008763)
HIX0190575
HIT000512000 (
ENST00000414066
)
(Serine/threonine/dual specificity protein kinase, catalytic domain containing protein.)
genome : 38,107,534 - 38,109,910 (2,377)
query : 1 - 2,240 (2,240/2,240)
2 exons
identity = 0.999
3'(1.000;0.965)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 17.5, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190575)
HIX0190575
pHIT000017431 ( pHIT000017431 )
Representative transcript
(Conserved hypothetical protein.)
genome : 38,107,896 - 38,108,846 (951)
query : 1 - 951 (951/951)
1 exon
InterPro :
IPR008271 : Serine/threonine-protein kinase, active site
IPR027086 : Serine/threonine-protein kinase TOUSLED-like 2
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005634 : Cellular Component : nucleus
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190575)
CAGE tag :
H05BD67P0506
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000002648
Tetraodon
sp. (Tetraodon) : GSTENT00021801001
Macaca
sp. (Macaque) : XR_011725
Pan
sp. (Chimpanzee) : XR_023557
HIX0008763
HIT000724553 (
NM_001267597
)
(Zinc finger protein 248;)
genome : 38,117,693 - 38,147,012 (29,320)
query : 1 - 4,795 (4,795/4,819)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008763)
HIX0008763
HIT000317524 (
NM_021045
)
(Zinc finger protein 248;)
genome : 38,117,693 - 38,146,564 (28,872)
query : 1 - 5,167 (5,167/5,191)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008763)
HIX0008763
HIT000724555 (
NM_001267605
)
(Zinc finger protein 248 isoform 2.)
genome : 38,117,693 - 38,146,564 (28,872)
query : 1 - 3,455 (3,455/3,479)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 16, nucl 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008763)
HIX0008763
HIT000724556 (
NM_001267606
)
(Zinc finger protein 248 isoform 2.)
genome : 38,117,693 - 38,146,564 (28,872)
query : 1 - 4,204 (4,204/4,228)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 16, nucl 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008763)
HIX0008763
HIT000479231 (
ENST00000395867
)
(Zinc finger protein 248;)
genome : 38,117,693 - 38,146,538 (28,846)
query : 1 - 5,141 (5,141/5,141)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008763)
HIX0008763
HIT000261006
(
BC063550
)
(Conserved hypothetical protein.)
genome : 38,117,898 - 38,118,712 (815)
query : 1 - 815 (815/950)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 3, cyto 2, mito 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008763)
HIX0008763
HIT000023763
(
AL049341
)
(Conserved hypothetical protein.)
genome : 38,117,898 - 38,119,142 (1,245)
query : 1 - 1,245 (1,245/1,264)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 20, plas 4, nucl 4, cyto 2, E.R. 2, extr_plas 2,
cysk_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008763)
HIX0008763
HIT000339760
(
BC110869
)
(Zinc finger protein 248 isoform 2.)
genome : 38,117,898 - 38,146,354 (28,457)
query : 1 - 3,789 (3,789/3,804)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 16, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008763)
HIX0008763
HIT000248198
(
AJ491695
)
(Zinc finger protein 248;)
genome : 38,117,899 - 38,146,486 (28,588)
query : 1 - 4,883 (4,883/4,883)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008763)
HIX0008763
HIT000597541 (
ENST00000494133
)
(Zinc finger protein 248 isoform 2.)
genome : 38,118,206 - 38,127,039 (8,834)
query : 1 - 802 (802/802)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 7, nucl 3, plas 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008763)
HIX0008763
HIT000390966
(
BC132915
)
(Zinc finger protein 248;)
genome : 38,118,757 - 38,146,222 (27,466)
query : 1 - 3,761 (3,761/3,761)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008763)
HIX0008763
HIT000390968
(
BC132917
)
(Zinc finger protein 248;)
genome : 38,118,757 - 38,146,222 (27,466)
query : 1 - 3,761 (3,761/3,761)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008763)
HIX0008763
HIT000248219
(
AJ492196
)
(Zinc finger protein 248 isoform 2.)
genome : 38,119,784 - 38,146,486 (26,703)
query : 1 - 1,286 (1,286/1,306)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 16, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008763)
HIX0008763
HIT000355928 (
ENST00000374648
)
(Zinc finger protein 248 isoform 2.)
genome : 38,119,784 - 38,146,486 (26,703)
query : 1 - 1,286 (1,286/1,286)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 16, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008763)
HIX0008763
HIT000488560
(
AK293936
)
(Zinc finger protein 248 isoform 1.)
genome : 38,119,914 - 38,121,357 (1,444)
query : 1 - 1,444 (1,444/1,444)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008763)
HIX0008763
HIT000488595
(
AK293971
)
(Zinc finger protein 248 isoform 1.)
genome : 38,119,974 - 38,121,489 (1,516)
query : 1 - 1,516 (1,516/1,516)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008763)
HIX0008763
HIT000311188 (
ENST00000357328
)
(Zinc finger protein 248;)
genome : 38,120,463 - 38,147,012 (26,550)
query : 1 - 2,025 (2,025/2,025)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008763)
HIX0008763
HIT000493981
(
AK299357
)
(Zinc finger protein 248;)
genome : 38,120,463 - 38,147,012 (26,550)
query : 1 - 2,025 (2,025/2,025)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008763)
HIX0219060
HIT000695342 (
ENST00000583461
)
(Non-protein coding transcript.)
genome : 38,120,817 - 38,120,899 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219060)
HIX0008763
HIT000479237 (
ENST00000395873
)
(Zinc finger protein 248 isoform 2.)
genome : 38,121,983 - 38,146,965 (24,983)
query : 1 - 698 (698/698)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14, extr 6, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008763)
HIX0008763
HIT000479238 (
ENST00000395874
)
(Zinc finger protein 248 isoform 2.)
genome : 38,126,574 - 38,147,034 (20,461)
query : 1 - 436 (436/436)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 15, cyto_plas 13.8333, extr 3,
nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008763)
HIX0170836
HIT000527148 (
ENST00000429214
)
(Hypothetical short protein.)
genome : 38,146,668 - 38,148,038 (1,371)
query : 1 - 826 (826/826)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170836)
HIX0201561
HIT000505734 (
ENST00000406795
)
(Krueppel-associated box domain containing protein.)
genome : 38,172,522 - 38,173,037 (516)
query : 1 - 241 (241/241)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12, extr 9, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201561)
HIX0190557
HIT000530426 (
ENST00000432492
)
(Conserved hypothetical protein.)
genome : 38,183,565 - 38,185,594 (2,030)
query : 1 - 2,030 (2,030/2,030)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190557)
HIX0008764
HIT000116209 (
ENST00000302609
)
(Zinc finger protein 25; Zinc finger protein KOX19;)
genome : 38,238,500 - 38,265,561 (27,062)
query : 1 - 4,139 (4,139/4,139)
6 exons
identity = 0.999
3'(1.000;0.941;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008764)
HIX0008764
HIT000028856
(
AL834125
)
(Zinc finger protein 25; Zinc finger protein KOX19;)
genome : 38,238,794 - 38,242,541 (3,748)
query : 2 - 3,749 (3,748/3,824)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008764)
HIX0008764
HIT000028974
(
AL834244
)
(Conserved hypothetical protein.)
genome : 38,238,796 - 38,241,216 (2,421)
query : 2 - 2,421 (2,420/2,442)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 7.5, mito_pero 7.5, cyto_nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008764)
HIX0008764
HIT000213027 (
NM_145011
)
(Zinc finger protein 25; Zinc finger protein KOX19;)
genome : 38,238,795 - 38,260,738 (21,944)
query : 18 - 3,736 (3,719/3,736)
5 exons
identity = 0.999
3'(1.000;0.941;1.000;1.000;1.000)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 17.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008764)
HIX0008764
HIT000248199
(
AJ491696
)
(Zinc finger protein 25; Zinc finger protein KOX19;)
genome : 38,238,795 - 38,260,738 (21,944)
query : 18 - 3,736 (3,719/3,736)
5 exons
identity = 0.999
3'(1.000;0.941;1.000;1.000;1.000)5'
coverage = 0.995
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008764)
HIX0008764
HIT000013249
(
AK056635
)
(Zinc finger protein 571.)
genome : 38,238,795 - 38,241,335 (2,541)
query : 1 - 2,539 (2,539/2,539)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008764)
HIX0008764
HIT000051597
(
BC036038
)
Representative transcript
(Zinc finger protein 25; Zinc finger protein KOX19;)
genome : 38,239,508 - 38,265,555 (26,048)
query : 1 - 3,146 (3,146/3,160)
7 exons
identity = 0.997
3'(0.997;0.941;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008764)
HIX0008764
HIT000355913 (
ENST00000374633
)
(Zinc finger protein 25; Zinc finger protein KOX19;)
genome : 38,239,508 - 38,265,555 (26,048)
query : 1 - 3,148 (3,148/3,161)
7 exons
identity = 0.999
3'(1.000;0.941;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008764)
HIX0008764
HIT000013066
(
AK056452
)
(Zinc finger protein 25; Zinc finger protein KOX19;)
genome : 38,239,509 - 38,265,561 (26,053)
query : 1 - 3,130 (3,130/3,130)
6 exons
identity = 0.998
3'(0.999;0.941;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008764)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB172891
Mus
sp. (Mouse) : AK029052
Pongo
sp. (Orangutan) : CR859167
Rattus
sp. (Rat) : ENSRNOT00000009095
Pan
sp. (Chimpanzee) : XM_001151908
Equus
sp. (Horse) : XM_001490116
Canis
sp. (Dog) : XM_536326
Danio
sp. (Zebrafish) : XM_683166
HIX0008764
HIT000042831
(
AK122958
)
(Zinc finger protein 25; Zinc finger protein KOX19;)
genome : 38,239,509 - 38,265,525 (26,017)
query : 1 - 3,115 (3,115/3,115)
7 exons
identity = 0.996
3'(0.997;0.941;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008764)
HIX0008764
HIT000016245
(
AK091378
)
(Zinc finger protein 25; Zinc finger protein KOX19;)
genome : 38,239,509 - 38,246,030 (6,522)
query : 1 - 2,761 (2,761/2,761)
3 exons
identity = 0.998
3'(0.999;0.941;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008764)
HIX0008764
HIT000321763
(
X52350
)
(Conserved hypothetical protein.)
genome : 38,241,571 - 38,241,738 (168)
query : 1 - 168 (168/168)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008764)
HIX0008764
HIT000572561 (
ENST00000467975
)
(Zinc finger protein 25; Zinc finger protein KOX19;)
genome : 38,241,991 - 38,265,520 (23,530)
query : 1 - 689 (689/689)
7 exons
identity = 0.997
3'(1.000;1.000;0.971;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008764)
HIX0170614
HIT000510723 (
ENST00000412789
)
(Hypothetical short protein.)
genome : 38,265,753 - 38,281,395 (15,643)
query : 1 - 444 (444/444)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170614)
HIX0008765
HIT000203520 (
NM_006974
)
(Zinc finger protein 33A; Zinc finger and ZAK-associated protein with KRAB domain; ZZaPK; Zinc finger protein 11A; Zinc finger protein KOX31;)
genome : 38,299,578 - 38,348,995 (49,418)
query : 1 - 6,118 (6,118/6,127)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000398358 (
NM_006954
)
(Zinc finger protein 33A; Zinc finger and ZAK-associated protein with KRAB domain; ZZaPK; Zinc finger protein 11A; Zinc finger protein KOX31;)
genome : 38,299,578 - 38,348,995 (49,418)
query : 1 - 6,121 (6,121/6,130)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000725495 (
NM_001278170
)
(Zinc finger protein 33A isoform c.)
genome : 38,299,578 - 38,348,995 (49,418)
query : 1 - 6,065 (6,065/6,074)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000725496 (
NM_001278171
)
(Zinc finger protein 33A; Zinc finger and ZAK-associated protein with KRAB domain; ZZaPK; Zinc finger protein 11A; Zinc finger protein KOX31;)
genome : 38,299,578 - 38,348,995 (49,418)
query : 1 - 6,244 (6,244/6,253)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000725498 (
NM_001278173
)
(Zinc finger protein 33A isoform e.)
genome : 38,299,578 - 38,348,995 (49,418)
query : 1 - 6,200 (6,200/6,209)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000725499 (
NM_001278174
)
(Zinc finger protein 33A; Zinc finger and ZAK-associated protein with KRAB domain; ZZaPK; Zinc finger protein 11A; Zinc finger protein KOX31;)
genome : 38,299,578 - 38,348,995 (49,418)
query : 1 - 6,196 (6,196/6,205)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000725500 (
NM_001278175
)
(Zinc finger protein 33A isoform f.)
genome : 38,299,578 - 38,348,995 (49,418)
query : 1 - 6,185 (6,185/6,194)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 17.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000725501 (
NM_001278176
)
(Zinc finger protein 33A isoform g.)
genome : 38,299,578 - 38,348,995 (49,418)
query : 1 - 6,201 (6,201/6,210)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000725502 (
NM_001278177
)
(Zinc finger protein 33A isoform h.)
genome : 38,299,578 - 38,348,995 (49,418)
query : 1 - 6,117 (6,117/6,126)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000725503 (
NM_001278178
)
(Zinc finger protein 33A isoform d.)
genome : 38,299,578 - 38,348,995 (49,418)
query : 1 - 6,126 (6,126/6,135)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000725504 (
NM_001278179
)
(Zinc finger protein 33A; Zinc finger and ZAK-associated protein with KRAB domain; ZZaPK; Zinc finger protein 11A; Zinc finger protein KOX31;)
genome : 38,299,578 - 38,348,995 (49,418)
query : 1 - 6,241 (6,241/6,250)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000355898 (
ENST00000374618
)
(Zinc finger protein 33A; Zinc finger and ZAK-associated protein with KRAB domain; ZZaPK; Zinc finger protein 11A; Zinc finger protein KOX31;)
genome : 38,299,578 - 38,348,991 (49,414)
query : 1 - 6,117 (6,117/6,117)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000498069
(
AK303445
)
(Zinc finger protein 33A isoform a.)
genome : 38,299,585 - 38,345,789 (46,205)
query : 3 - 2,854 (2,852/2,854)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 0.999
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000530834 (
ENST00000432900
)
(Zinc finger protein 33A isoform c.)
genome : 38,299,583 - 38,345,789 (46,207)
query : 1 - 2,854 (2,854/2,854)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000425641
(
AK292844
)
(Zinc finger protein 33A; Zinc finger and ZAK-associated protein with KRAB domain; ZZaPK; Zinc finger protein 11A; Zinc finger protein KOX31;)
genome : 38,299,597 - 38,345,529 (45,933)
query : 1 - 2,636 (2,636/2,636)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000002652
Tetraodon
sp. (Tetraodon) : GSTENT00006473001
Pan
sp. (Chimpanzee) : XM_521451
Canis
sp. (Dog) : XM_546066
HIX0008765
HIT000556639 (
ENST00000458705
)
(Zinc finger protein 33A; Zinc finger and ZAK-associated protein with KRAB domain; ZZaPK; Zinc finger protein 11A; Zinc finger protein KOX31;)
genome : 38,299,598 - 38,348,981 (49,384)
query : 1 - 6,084 (6,084/6,084)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000089387
(
BC017760
)
(Zinc finger protein 33A isoform a.)
genome : 38,299,609 - 38,343,544 (43,936)
query : 1 - 639 (639/668)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000010331
(
AK027057
)
Representative transcript
(Zinc finger protein 33A isoform a.)
genome : 38,299,614 - 38,356,282 (56,669)
query : 1 - 2,006 (2,006/2,052)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.994)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 16, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000573574 (
ENST00000469037
)
(Zinc finger protein 33A isoform a.)
genome : 38,299,614 - 38,354,016 (54,403)
query : 1 - 1,530 (1,530/1,530)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 16, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000580695 (
ENST00000476504
)
(Zinc finger protein 33A isoform b.)
genome : 38,299,621 - 38,306,635 (7,015)
query : 1 - 706 (706/706)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 11.5, extr 10, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000582655 (
ENST00000478556
)
(Zinc finger protein 33A isoform h.)
genome : 38,299,627 - 38,343,466 (43,840)
query : 1 - 539 (539/539)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 6, nucl 5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000042211
(
D31763
)
(Zinc finger protein 33A; Zinc finger and ZAK-associated protein with KRAB domain; ZZaPK; Zinc finger protein 11A; Zinc finger protein KOX31;)
genome : 38,299,641 - 38,348,981 (49,341)
query : 1 - 6,041 (6,041/6,041)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000388711
(
BC126119
)
(Zinc finger protein 33A; Zinc finger and ZAK-associated protein with KRAB domain; ZZaPK; Zinc finger protein 11A; Zinc finger protein KOX31;)
genome : 38,305,740 - 38,346,887 (41,148)
query : 1 - 3,885 (3,885/3,885)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000085075
(
AY184389
)
(Zinc finger protein 33A; Zinc finger and ZAK-associated protein with KRAB domain; ZZaPK; Zinc finger protein 11A; Zinc finger protein KOX31;)
genome : 38,305,797 - 38,348,295 (42,499)
query : 8 - 5,240 (5,233/5,258)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000117660 (
ENST00000307441
)
(Zinc finger protein 33A; Zinc finger and ZAK-associated protein with KRAB domain; ZZaPK; Zinc finger protein 11A; Zinc finger protein KOX31;)
genome : 38,305,797 - 38,345,488 (39,692)
query : 8 - 2,433 (2,426/2,433)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000065275
(
AF063599
)
(Zinc finger protein 37A.)
genome : 38,305,859 - 38,329,500 (23,642)
query : 1 - 1,344 (1,344/1,356)
3 exons
identity = 0.993
5'(1.000;0.990;0.992)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, nucl 6, mito 6, mito_nucl 6, pero 4,
E.R._mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000092128
(
BC030511
)
(Zinc finger protein 33A isoform f.)
genome : 38,343,329 - 38,355,979 (12,651)
query : 12 - 1,294 (1,283/1,319)
3 exons
identity = 0.995
5'(0.991;1.000;0.966)3'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 15, cyto_plas 10.5, nucl 9.5,
extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000322939
(
X68687
)
(Zinc finger protein 33B; Zinc finger protein 11B; Zinc finger protein KOX2;)
genome : 38,344,938 - 38,345,909 (972)
query : 1 - 972 (972/972)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0008765
HIT000067410
(
AF086531
)
(Hypothetical short protein.)
genome : 38,348,337 - 38,348,982 (646)
query : 1 - 646 (646/655)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008765)
HIX0190682
pHIT000017436 ( pHIT000017436 )
Representative transcript
(Conserved hypothetical protein.)
genome : 38,349,700 - 38,357,553 (7,854)
query : 1 - 684 (684/684)
4 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190682)
CAGE tag :
H22BA20M1410
HIX0209351
HIT000598569_01 (
ENST00000495197
)
(Translation initiation factor 3 complex subunit L family protein.)
genome : 38,368,984 - 38,369,805 (822)
query : 1 - 822 (822/822)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, mito 12, cyto_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209351)
HIX0171050
HIT000542108 (
ENST00000444174
)
(Conserved hypothetical protein.)
genome : 38,380,692 - 38,380,979 (288)
query : 1 - 288 (288/288)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 2.5, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171050)
HIX0008766
HIT000316372 (
NM_001007094
)
(Zinc finger protein 37A; Zinc finger protein KOX21;)
genome : 38,383,264 - 38,412,277 (29,014)
query : 1 - 7,028 (7,028/7,058)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008766)
HIX0008766
HIT000316960 (
NM_003421
)
(Zinc finger protein 37A; Zinc finger protein KOX21;)
genome : 38,383,264 - 38,412,277 (29,014)
query : 1 - 6,554 (6,554/6,584)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008766)
HIX0008766
HIT000655318 (
NM_001178101
)
(Zinc finger protein 37A; Zinc finger protein KOX21;)
genome : 38,383,264 - 38,412,277 (29,014)
query : 1 - 6,550 (6,550/6,580)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008766)
HIX0008766
HIT000308140 (
ENST00000351773
)
(Zinc finger protein 37A; Zinc finger protein KOX21;)
genome : 38,383,264 - 38,412,276 (29,013)
query : 1 - 7,027 (7,027/7,027)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008766)
HIX0008766
HIT000601981 (
ENST00000498773
)
(Hypothetical short protein.)
genome : 38,383,264 - 38,384,487 (1,224)
query : 1 - 471 (471/471)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008766)
HIX0008766
HIT000314366 (
ENST00000361085
)
(Zinc finger protein 37A; Zinc finger protein KOX21;)
genome : 38,383,275 - 38,411,511 (28,237)
query : 1 - 5,777 (5,777/5,777)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008766)
HIX0008766
HIT000016879
(
AK092012
)
(Zinc finger protein 37A; Zinc finger protein KOX21;)
genome : 38,383,275 - 38,408,652 (25,378)
query : 1 - 2,918 (2,918/2,918)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008766)
HIX0008766
HIT000055736
(
BX647089
)
Representative transcript
(Zinc finger protein 37A.)
genome : 38,383,279 - 38,412,263 (28,985)
query : 1 - 7,000 (7,000/7,059)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008766)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB174362
Mus
sp. (Mouse) : BC060708
Bos
sp. (Cow) : BC104558
Pan
sp. (Chimpanzee) : XM_001152210
Monodelphis
sp. (Opossum) : XM_001369071
Equus
sp. (Horse) : XM_001490193
HIX0008766
HIT000583533 (
ENST00000479469
)
(Zinc finger protein 37A.)
genome : 38,383,279 - 38,404,313 (21,035)
query : 1 - 1,148 (1,148/1,148)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, cyto 13, extr 8, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008766)
HIX0008766
HIT000248218
(
AJ492195
)
(Zinc finger protein 37A; Zinc finger protein KOX21;)
genome : 38,383,296 - 38,412,262 (28,967)
query : 1 - 6,505 (6,505/6,505)
7 exons
identity = 0.999
5'(0.984;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008766)
HIX0008766
HIT000037363
(
BC015858
)
(Zinc finger protein 37A; Zinc finger protein KOX21;)
genome : 38,383,309 - 38,407,876 (24,568)
query : 5 - 2,108 (2,104/2,136)
7 exons
identity = 0.999
5'(0.991;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.998
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008766)
HIX0008766
HIT000581921 (
ENST00000477790
)
(Zinc finger protein 37A.)
genome : 38,385,502 - 38,404,621 (19,120)
query : 1 - 685 (685/685)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 7.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008766)
HIX0008766
HIT000322962
(
X69115
)
(Zinc finger protein 268 isoform c.)
genome : 38,407,035 - 38,408,041 (1,007)
query : 1 - 1,007 (1,007/1,007)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008766)
HIX0008766
HIT000321765
(
X52352
)
(Non-protein coding transcript.)
genome : 38,407,058 - 38,407,225 (168)
query : 1 - 168 (168/168)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008766)
HIX0035524
HIT000049792
(
AK130521
)
Representative transcript
(Disrupted in schizophrenia 1 protein isoform c.)
genome : 38,409,360 - 38,411,168 (1,809)
query : 1 - 1,810 (1,810/1,810)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035524)
HIX0008767
HIT000028471
(
AL833559
)
Representative transcript
(Conserved hypothetical protein.)
genome : 38,426,265 - 38,433,325 (7,061)
query : 1 - 7,061 (7,061/7,078)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008767)
HIX0170854
HIT000528409 (
ENST00000430475
)
(Conserved hypothetical protein.)
genome : 38,450,498 - 38,450,677 (180)
query : 1 - 180 (180/180)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170854)
HIX0035631
HIT000517713 (
ENST00000419779
)
(Hypothetical short protein.)
genome : 38,453,576 - 38,466,958 (13,383)
query : 1 - 428 (428/428)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035631)
HIX0035631
HIT000098368
(
BC046442
)
Representative transcript
(Cyclin-Y-like protein 1 isoform 2.)
genome : 38,464,596 - 38,503,273 (38,678)
query : 1 - 2,776 (2,776/2,800)
7 exons
identity = 0.996
5'(0.993;1.000;1.000;1.000;1.000;1.000;0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 17, cyto_plas 12.1667, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035631)
Ortholog candidate ( ->
Evola
)
Takifugu
sp. (Fugu) : SINFRUT00000135763
Macaca
sp. (Macaque) : XR_011861
HIX0035631
HIT000521096 (
ENST00000423162
)
(Cyclin-Y-like protein 1 isoform 2.)
genome : 38,464,596 - 38,501,285 (36,690)
query : 1 - 790 (790/790)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 17, cyto_plas 12.1667, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035631)
HIX0035631
HIT000562696 (
NR_024524
)
(Cyclin-Y-like protein 1 isoform 2.)
genome : 38,464,599 - 38,503,273 (38,675)
query : 1 - 2,775 (2,775/2,799)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 17, cyto_plas 12.1667, nucl 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035631)
HIX0171182
HIT000551416 (
ENST00000453482
)
(Conserved hypothetical protein.)
genome : 38,475,598 - 38,475,699 (102)
query : 1 - 102 (102/102)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, extr 12, cyto_nucl 11, cyto 6, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171182)
HIX0171150
HIT000548914 (
ENST00000450980
)
(Conserved hypothetical protein.)
genome : 38,536,850 - 38,622,083 (85,234)
query : 1 - 425 (425/425)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, mito 7, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171150)
HIX0170700
HIT000516667 (
ENST00000418733
)
(Conserved hypothetical protein.)
genome : 38,539,370 - 38,539,531 (162)
query : 1 - 162 (162/162)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 15.5, cyto_plas 13.6667, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170700)
HIX0019166
HIT000589210_02 (
ENST00000485405
)
(3-keto-steroid reductase; EC=1.1.1.270; 17-beta-hydroxysteroid dehydrogenase 7; 17-beta-HSD 7; Estradiol 17-beta-dehydrogenase 7; EC=1.1.1.62;)
genome : 38,645,284 - 38,667,432 (22,149)
query : 1 - 2,541 (2,541/2,541)
9 exons
identity = 0.984
5'(0.985;0.985;0.978;0.982;0.990;0.990;1.000;
0.990;0.983)3'
coverage = 1.000
EC number :
EC 1.1.1.62
,
EC 1.1.1.270
KEGG pathway :
00100 : Steroid biosynthesis (20)
00140 : Steroid hormone biosynthesis (37)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto_mito 13.5, extr 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019166)
HIX0019166
HIT000489956
(
AK295332
)
(3-keto-steroid reductase.)
genome : 38,645,294 - 38,647,980 (2,687)
query : 1 - 864 (864/864)
2 exons
identity = 0.995
5'(0.984;0.997)3'
coverage = 1.000
EC number :
EC 1.1.1.62
KEGG pathway :
00140 : Steroid hormone biosynthesis (37)
01100 : Metabolic pathways (1346)
InterPro :
IPR002198 : Short-chain dehydrogenase/reductase SDR
IPR016040 : NAD(P)-binding domain
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 5, cyto 2, golg 2, cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019166)
HIX0019166
HIT000257870
(
AY829267
)
(3-keto-steroid reductase.)
genome : 38,645,299 - 38,667,035 (21,737)
query : 1 - 1,012 (1,012/1,012)
8 exons
identity = 0.998
5'(1.000;1.000;0.990;1.000;0.995;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 1.1.1.62
KEGG pathway :
00140 : Steroid hormone biosynthesis (37)
01100 : Metabolic pathways (1346)
InterPro :
IPR002198 : Short-chain dehydrogenase/reductase SDR
IPR002347 : Glucose/ribitol dehydrogenase
IPR016040 : NAD(P)-binding domain
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 7.5, mito_pero 4.5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019166)
HIX0019166
HIT000567848_02 (
ENST00000463037
)
(3-keto-steroid reductase.)
genome : 38,645,303 - 38,654,557 (9,255)
query : 1 - 859 (859/859)
6 exons
identity = 0.985
5'(0.983;0.983;0.977;0.978;0.991;0.990)3'
coverage = 1.000
EC number :
EC 1.1.1.62
KEGG pathway :
00140 : Steroid hormone biosynthesis (37)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.3333, cyto 11.5, nucl 9,
cyto_pero 7.33333, extr 5, E.R._mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019166)
HIX0019166
HIT000002168
(
AF165514
)
Representative transcript
(3-keto-steroid reductase.)
genome : 38,645,305 - 38,667,127 (21,823)
query : 1 - 1,242 (1,242/1,272)
10 exons
identity = 0.995
5'(0.991;1.000;1.000;1.000;1.000;1.000;0.980;
1.000;0.980;0.995)3'
coverage = 1.000
EC number :
EC 1.1.1.62
KEGG pathway :
00140 : Steroid hormone biosynthesis (37)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, mito 4.5, mito_pero 3, cyto_plas 3,
cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019166)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC011464
Danio
sp. (Zebrafish) : BC124783
Gallus
sp. (Chicken) : BX935618
Macaca
sp. (Macaque) : DQ266253
Oryzias
sp. (Medaka) : ENSORLT00000013564
Tetraodon
sp. (Tetraodon) : GSTENT00024682001
Takifugu
sp. (Fugu) : SINFRUT00000135503
Rattus
sp. (Rat) : U44803
Monodelphis
sp. (Opossum) : XM_001369972
Pan
sp. (Chimpanzee) : XM_521448
HIX0019166
HIT000111600_01 (
ENST00000277668
)
(3-keto-steroid reductase.)
genome : 38,645,305 - 38,667,124 (21,820)
query : 1 - 1,240 (1,240/1,240)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, mito 4.5, mito_pero 3, cyto_plas 3,
cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019166)
HIX0019166
HIT000002171
(
AF165517
)
(3-keto-steroid reductase.)
genome : 38,645,306 - 38,667,127 (21,822)
query : 1 - 1,192 (1,192/1,221)
9 exons
identity = 0.995
5'(0.991;1.000;1.000;1.000;1.000;0.980;1.000;
0.980;0.995)3'
coverage = 1.000
EC number :
EC 1.1.1.62
KEGG pathway :
00140 : Steroid hormone biosynthesis (37)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 11.5, mito_pero 6.5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019166)
HIX0019166
HIT000355840_01 (
ENST00000374560
)
(3-keto-steroid reductase.)
genome : 38,645,306 - 38,667,124 (21,819)
query : 1 - 1,190 (1,190/1,190)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 11.5, mito_pero 6.5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019166)
HIX0019166
HIT000264793
(
BC071987
)
(3-keto-steroid reductase.)
genome : 38,645,308 - 38,667,433 (22,126)
query : 1 - 1,401 (1,401/1,418)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 1.1.1.62
KEGG pathway :
00140 : Steroid hormone biosynthesis (37)
01100 : Metabolic pathways (1346)
InterPro :
IPR002198 : Short-chain dehydrogenase/reductase SDR
IPR002347 : Glucose/ribitol dehydrogenase
IPR016040 : NAD(P)-binding domain
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 7.5, mito_pero 4.5, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019166)
HIX0019166
HIT000367356 (
NR_003086
)
(3-keto-steroid reductase.)
genome : 38,645,308 - 38,667,433 (22,126)
query : 1 - 1,401 (1,401/1,418)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 1.1.1.62
KEGG pathway :
00140 : Steroid hormone biosynthesis (37)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 7.5, mito_pero 4.5, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019166)
HIX0019166
HIT000597936_02 (
ENST00000494540
)
(3-keto-steroid reductase.)
genome : 38,645,308 - 38,667,433 (22,126)
query : 1 - 1,401 (1,401/1,401)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 1.1.1.62
KEGG pathway :
00140 : Steroid hormone biosynthesis (37)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 7.5, mito_pero 4.5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019166)
HIX0019166
HIT000488592
(
AK293968
)
(3-keto-steroid reductase.)
genome : 38,645,315 - 38,654,939 (9,625)
query : 1 - 819 (819/844)
6 exons
identity = 0.999
5'(0.990;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.970
EC number :
EC 1.1.1.62
KEGG pathway :
00140 : Steroid hormone biosynthesis (37)
01100 : Metabolic pathways (1346)
InterPro :
IPR002198 : Short-chain dehydrogenase/reductase SDR
IPR002347 : Glucose/ribitol dehydrogenase
IPR016040 : NAD(P)-binding domain
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 10.5, mito_pero 6, nucl 2, cyto 2,
cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019166)
HIX0019166
HIT000570840_02 (
ENST00000466176
)
(3-keto-steroid reductase.)
genome : 38,645,315 - 38,654,453 (9,139)
query : 1 - 650 (650/650)
6 exons
identity = 0.985
5'(0.981;0.985;0.977;0.978;0.991;0.989)3'
coverage = 1.000
EC number :
EC 1.1.1.62
KEGG pathway :
00140 : Steroid hormone biosynthesis (37)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 6, mito 3.5, mito_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019166)
HIX0019166
HIT000426040
(
AK307174
)
(3-keto-steroid reductase; EC=1.1.1.270; 17-beta-hydroxysteroid dehydrogenase 7; 17-beta-HSD 7; Estradiol 17-beta-dehydrogenase 7; EC=1.1.1.62; PRL receptor-associated protein; PRAP;)
genome : 38,645,315 - 38,651,196 (5,882)
query : 1 - 1,298 (1,298/1,298)
3 exons
identity = 0.998
5'(1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 1.1.1.62
,
EC 1.1.1.270
KEGG pathway :
00100 : Steroid biosynthesis (20)
00140 : Steroid hormone biosynthesis (37)
01100 : Metabolic pathways (1346)
InterPro :
IPR002198 : Short-chain dehydrogenase/reductase SDR
IPR016040 : NAD(P)-binding domain
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 4.5, cyto 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019166)
HIX0019166
HIT000106643_02 (
ENST00000254521
)
(3-keto-steroid reductase; EC=1.1.1.270; 17-beta-hydroxysteroid dehydrogenase 7; 17-beta-HSD 7; Estradiol 17-beta-dehydrogenase 7; EC=1.1.1.62;)
genome : 38,645,328 - 38,667,144 (21,817)
query : 1 - 1,190 (1,190/1,190)
9 exons
identity = 0.989
5'(0.978;0.985;0.978;0.991;0.990;0.990;1.000;
0.990;0.996)3'
coverage = 1.000
EC number :
EC 1.1.1.62
,
EC 1.1.1.270
KEGG pathway :
00100 : Steroid biosynthesis (20)
00140 : Steroid hormone biosynthesis (37)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17.5, cyto_mito 10, plas 4.5, pero 4,
extr_plas 3.5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019166)
HIX0019166
HIT000310327_01 (
ENST00000356314
)
(3-keto-steroid reductase; EC=1.1.1.270; 17-beta-hydroxysteroid dehydrogenase 7; 17-beta-HSD 7; Estradiol 17-beta-dehydrogenase 7; EC=1.1.1.62;)
genome : 38,645,328 - 38,667,124 (21,797)
query : 1 - 1,170 (1,170/1,170)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.995;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16.5, cyto_mito 9.5, plas 4.5, pero 4,
extr_plas 3.5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019166)
HIX0019166
HIT000575800_02 (
ENST00000471365
)
(3-keto-steroid reductase.)
genome : 38,645,383 - 38,667,035 (21,653)
query : 1 - 1,033 (1,033/1,033)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.1.1.62
KEGG pathway :
00140 : Steroid hormone biosynthesis (37)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 9.5, mito_pero 5.5, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019166)
HIX0019166
HIT000588111_02 (
ENST00000484251
)
(3-keto-steroid reductase.)
genome : 38,651,776 - 38,654,557 (2,782)
query : 1 - 712 (712/712)
4 exons
identity = 0.975
5'(1.000;0.952;0.991;0.990)3'
coverage = 1.000
EC number :
EC 1.1.1.62
KEGG pathway :
00140 : Steroid hormone biosynthesis (37)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11.5, nucl 8.5, extr 4, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019166)
HIX0019166
HIT000597848_02 (
ENST00000494450
)
(3-keto-steroid reductase.)
genome : 38,654,124 - 38,658,926 (4,803)
query : 1 - 585 (585/585)
3 exons
identity = 0.993
5'(0.993;0.990;1.000)3'
coverage = 1.000
EC number :
EC 1.1.1.62
KEGG pathway :
00140 : Steroid hormone biosynthesis (37)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019166)
HIX0019166
HIT000574682_02 (
ENST00000470195
)
(3-keto-steroid reductase.)
genome : 38,654,381 - 38,667,141 (12,761)
query : 1 - 564 (564/564)
4 exons
identity = 0.995
5'(0.989;1.000;1.000;0.996)3'
coverage = 1.000
EC number :
EC 1.1.1.62
KEGG pathway :
00140 : Steroid hormone biosynthesis (37)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 10.5, mito 6, cyto 5.5, extr 4,
mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019166)
HIX0019166
HIT000592295_02 (
ENST00000488656
)
(3-keto-steroid reductase.)
genome : 38,657,539 - 38,658,933 (1,395)
query : 1 - 671 (671/671)
2 exons
identity = 0.990
5'(0.989;1.000)3'
coverage = 1.000
EC number :
EC 1.1.1.62
KEGG pathway :
00140 : Steroid hormone biosynthesis (37)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, mito 5, nucl 4, cyto_mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019166)
HIX0035398
HIT000097213
(
BC042387
)
Representative transcript
(Septin-7;)
genome : 38,671,999 - 38,691,780 (19,782)
query : 1 - 670 (670/685)
4 exons
identity = 0.999
3'(1.000;1.000;1.000;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto_nucl 8.5, cyto_mito 8.5, cyto 7.5,
mito 7.5, cyto_pero 5.66667, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035398)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001153099
HIX0035398
HIT000098906
(
BC048143
)
(Septin-7;)
genome : 38,671,999 - 38,691,780 (19,782)
query : 1 - 670 (670/685)
4 exons
identity = 0.999
3'(1.000;1.000;1.000;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto_nucl 8.5, cyto_mito 8.5, cyto 7.5,
mito 7.5, cyto_pero 5.66667, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035398)
HIX0035398
HIT000563373 (
NR_027269
)
(Septin-7;)
genome : 38,671,997 - 38,691,780 (19,784)
query : 1 - 672 (672/672)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto_nucl 8.5, cyto_mito 8.5, cyto 7.5,
mito 7.5, cyto_pero 5.66667, nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035398)
HIX0035398
HIT000579922 (
ENST00000475691
)
(Septin-7;)
genome : 38,671,997 - 38,691,521 (19,525)
query : 1 - 413 (413/413)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035398)
HIX0035398
HIT000125368 (
ENST00000328105
)
(Septin-7;)
genome : 38,671,997 - 38,682,040 (10,044)
query : 1 - 423 (423/423)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035398)
HIX0035398
HIT000592869 (
ENST00000489259
)
(Septin-7;)
genome : 38,674,074 - 38,691,844 (17,771)
query : 1 - 743 (743/743)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 9, cyto_nucl 9, cyto_mito 9, cyto 8.5, mito 7.5,
cyto_pero 6.16667, nucl 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035398)
HIX0035398
HIT000612742_04 (
ENST00000513147
)
(Septin-7;)
genome : 38,680,852 - 38,682,338 (1,487)
query : 1 - 585 (585/585)
2 exons
identity = 0.966
3'(0.979;0.960)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 8, cyto_nucl 7.5, nucl 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035398)
HIX0035398
HIT000503469
(
BC171738
)
(Septin-7;)
genome : 38,680,911 - 38,691,746 (10,836)
query : 1 - 385 (385/401)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.960
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto_nucl 9, cyto 8.5, cyto_mito 8.5,
mito 6.5, cyto_pero 6.16667, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035398)
HIX0035398
HIT000611517_04 (
ENST00000511823
)
(Septin-7;)
genome : 38,680,898 - 38,688,661 (7,764)
query : 1 - 336 (336/336)
3 exons
identity = 0.973
3'(0.980;0.987;0.955)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 6.5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035398)
HIX0035398
HIT000604641_04 (
ENST00000504422
)
(Hypothetical short protein.)
genome : 38,688,391 - 38,691,791 (3,401)
query : 1 - 563 (563/563)
2 exons
identity = 0.966
3'(0.974;0.959)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 11, cyto 11, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035398)
HIX0209455
HIT000606976_05 (
ENST00000506942
)
(Hypothetical short protein.)
genome : 38,689,357 - 38,690,287 (931)
query : 1 - 573 (573/573)
2 exons
identity = 0.986
3'(0.990;0.966)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 5, extr 4, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209455)
HIX0026039
HIT000659066_04 (
NR_033908
)
(Hypothetical protein.)
genome : 38,692,076 - 38,705,990 (13,915)
query : 2 - 1,371 (1,370/1,371)
7 exons
identity = 0.973
5'(0.960;0.982;0.992;0.981;0.970;0.966;0.974)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 15.5, cyto 12.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000657908_04 (
NR_029401
)
(Hypothetical protein.)
genome : 38,692,117 - 38,737,696 (45,580)
query : 1 - 3,834 (3,834/3,834)
18 exons
identity = 0.974
5'(0.967;0.982;0.992;0.986;0.968;0.955;0.966;
0.977;0.966;1.000;0.992;0.990;0.985;0.982;
0.983;0.984;0.983;0.962)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 9.66667, nucl 9.5, cyto 6.5,
cyto_pero 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000700595_05 (
ENST00000588755
)
(Non-protein coding transcript.)
genome : 38,696,551 - 38,696,653 (103)
query : 1 - 103 (103/103)
1 exon
identity = 0.971
5'(0.971)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000571202_06 (
ENST00000466557
)
(Hypothetical protein.)
genome : 38,696,559 - 38,724,181 (27,623)
query : 1 - 1,301 (1,301/1,301)
8 exons
identity = 0.976
5'(0.973;0.985;0.986;0.970;0.966;0.966;1.000;
0.992)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 14.5, cyto 11.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000677640_04 (
ENST00000564524
)
(Hypothetical protein.)
genome : 38,696,559 - 38,711,737 (15,179)
query : 1 - 284 (284/292)
3 exons
identity = 0.989
5'(0.973;1.000;1.000)3'
coverage = 0.973
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 11.5, nucl 10, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0170515
HIT000453813_06
(
DQ587282
)
Representative transcript
(Non-protein coding transcript.)
genome : 38,697,631 - 38,697,660 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170515)
HIX0026039
HIT000595467_07 (
ENST00000491962
)
(Hypothetical protein.)
genome : 38,701,653 - 38,704,525 (2,873)
query : 1 - 278 (278/278)
3 exons
identity = 0.986
5'(0.994;0.970;0.981)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 3, nucl 2, mito 2, cyto_golg 2,
mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000699751_06 (
ENST00000587910
)
(Non-protein coding transcript.)
genome : 38,705,609 - 38,706,128 (520)
query : 1 - 152 (152/152)
2 exons
identity = 0.961
5'(0.973;0.948)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0209447
HIT000599804_06 (
ENST00000496488
)
(Hypothetical short protein.)
genome : 38,708,847 - 38,709,922 (1,076)
query : 1 - 457 (457/457)
2 exons
identity = 0.967
3'(0.972;0.963)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 5, nucl 3, cyto 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209447)
HIX0026039
HIT000488389
(
AK293765
)
Representative transcript
(Conserved hypothetical protein.)
genome : 38,717,074 - 38,736,820 (19,747)
query : 1 - 992 (992/992)
8 exons
identity = 0.996
5'(0.993;1.000;0.991;0.995;1.000;0.995;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 5, cyto 2.5, E.R._mito 2.5,
mito_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000521621 (
ENST00000423687
)
(Conserved hypothetical protein.)
genome : 38,717,074 - 38,736,820 (19,747)
query : 1 - 992 (992/992)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 4, cyto_nucl 3.33333, cyto 2.5,
cyto_pero 2.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000602235_06 (
ENST00000499986
)
(Hypothetical protein.)
genome : 38,717,129 - 38,736,820 (19,692)
query : 1 - 934 (934/934)
8 exons
identity = 0.982
5'(0.938;0.992;0.991;0.986;1.000;0.984;0.983;
0.974)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 8, cyto 1.5, cyto_nucl 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000588688_05 (
ENST00000484859
)
(Hypothetical protein.)
genome : 38,720,854 - 38,729,315 (8,462)
query : 1 - 4,860 (4,860/4,860)
2 exons
identity = 0.975
5'(0.977;0.971)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, extr 12, cyto_nucl 10.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000594536_05 (
ENST00000490997
)
(Hypothetical protein.)
genome : 38,723,736 - 38,727,987 (4,252)
query : 1 - 518 (518/518)
3 exons
identity = 0.971
5'(0.979;0.992;0.951)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 6, nucl 6, mito 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000517094_04 (
ENST00000419160
)
(Hypothetical protein.)
genome : 38,734,978 - 38,737,259 (2,282)
query : 1 - 607 (607/607)
2 exons
identity = 0.969
5'(0.975;0.956)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000597223_07 (
ENST00000493797
)
(Hypothetical short protein.)
genome : 38,736,100 - 38,736,649 (550)
query : 1 - 323 (323/323)
2 exons
identity = 0.975
5'(0.977;0.966)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000713551_04 (
ENST00000601814
)
(Hypothetical protein.)
genome : 38,736,168 - 38,746,985 (10,818)
query : 4 - 635 (632/635)
3 exons
identity = 0.986
5'(0.985;0.966;0.989)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15, cyto 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000461590_06
(
DQ595059
)
(Non-protein coding transcript.)
genome : 38,736,606 - 38,736,635 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000450242_06
(
DQ583711
)
(Non-protein coding transcript.)
genome : 38,736,607 - 38,736,637 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000680356_05 (
ENST00000567343
)
(Hypothetical protein.)
genome : 38,736,648 - 38,737,546 (899)
query : 1 - 901 (901/901)
1 exon
identity = 0.967
5'(0.967)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 10, cyto_nucl 2, nucl 1.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000442318_11
(
DQ575787
)
(Non-protein coding transcript.)
genome : 38,736,857 - 38,736,887 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000442319_11
(
DQ575788
)
(Non-protein coding transcript.)
genome : 38,736,857 - 38,736,886 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000430471
(
AK311605
)
(Conserved hypothetical protein.)
genome : 38,736,891 - 38,740,938 (4,048)
query : 2 - 3,951 (3,950/3,951)
2 exons
identity = 0.993
5'(0.992;0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15.5, cyto 9.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000334097
(
BC053613
)
(Conserved hypothetical protein.)
genome : 38,737,202 - 38,740,934 (3,733)
query : 1 - 2,092 (2,092/2,104)
2 exons
identity = 0.999
5'(0.999;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 16, cyto 9.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000048619
(
AK128746
)
(Conserved hypothetical protein.)
genome : 38,737,272 - 38,741,080 (3,809)
query : 1 - 3,711 (3,711/3,711)
2 exons
identity = 0.988
5'(0.986;0.990)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15.5, cyto 9.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000456012_10
(
DQ589481
)
(Non-protein coding transcript.)
genome : 38,737,587 - 38,737,617 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000454496_10
(
DQ587965
)
(Non-protein coding transcript.)
genome : 38,740,113 - 38,740,142 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0209456
HIT000503849_05 (
ENST00000401754
)
(Hypothetical protein.)
genome : 38,741,842 - 38,742,248 (407)
query : 1 - 399 (399/399)
1 exon
identity = 0.951
3'(0.951)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209456)
HIX0209456
HIT000607425_07 (
ENST00000507432
)
(Hypothetical protein.)
genome : 38,741,842 - 38,742,248 (407)
query : 1 - 399 (399/399)
1 exon
identity = 0.958
3'(0.958)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209456)
HIX0026039
HIT000542385 (
ENST00000444451
)
(Conserved hypothetical protein.)
genome : 38,741,915 - 38,744,293 (2,379)
query : 1 - 1,913 (1,913/1,913)
3 exons
identity = 0.993
5'(1.000;0.978;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000526849_01 (
ENST00000428915
)
(Hypothetical protein.)
genome : 38,742,109 - 38,755,104 (12,996)
query : 1 - 727 (727/727)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 7, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000726194_01 (
NR_040415
)
(Hypothetical protein.)
genome : 38,742,109 - 38,755,104 (12,996)
query : 1 - 723 (723/723)
3 exons
identity = 0.971
5'(0.969;0.988;0.962)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 5, nucl 3, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000699276_03 (
ENST00000587432
)
(Hypothetical protein.)
genome : 38,742,252 - 38,755,012 (12,761)
query : 1 - 1,034 (1,034/1,034)
4 exons
identity = 0.978
5'(0.971;0.975;0.994;0.983)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto_nucl 6.5, nucl 6, cyto 5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000443594_10
(
DQ577063
)
(Non-protein coding transcript.)
genome : 38,743,405 - 38,743,434 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000623066_07 (
ENST00000523795
)
(Hypothetical protein.)
genome : 38,746,607 - 38,755,104 (8,498)
query : 2 - 380 (379/380)
2 exons
identity = 0.984
5'(0.988;0.981)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 7, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000613015_08 (
ENST00000513445
)
(Hypothetical protein.)
genome : 38,746,607 - 38,746,791 (185)
query : 2 - 186 (185/186)
1 exon
identity = 0.989
5'(0.989)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 5, nucl 5, plas 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000607985_09 (
ENST00000508026
)
(Hypothetical protein.)
genome : 38,746,607 - 38,746,784 (178)
query : 1 - 178 (178/178)
1 exon
identity = 0.989
5'(0.989)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 5, nucl 3, plas 2, pero 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000683615_04 (
ENST00000570774
)
(Hypothetical protein.)
genome : 38,746,609 - 38,746,791 (183)
query : 1 - 183 (183/183)
1 exon
identity = 0.989
5'(0.989)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 4, nucl 4, plas 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0026039
HIT000581874_05 (
ENST00000477740
)
(Hypothetical protein.)
genome : 38,746,615 - 38,763,099 (16,485)
query : 1 - 480 (480/491)
3 exons
identity = 0.990
5'(0.988;0.991;0.990)3'
coverage = 0.978
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 6, pero 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026039)
HIX0219063
HIT000700258_03 (
ENST00000588418
)
(Hypothetical short protein.)
genome : 38,759,761 - 38,760,740 (980)
query : 1 - 1,007 (1,007/1,007)
1 exon
identity = 0.959
3'(0.959)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 9, cyto_nucl 8, nucl 5, cysk 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219063)
HIX0170394
HIT000527247 (
ENST00000429313
)
(Conserved hypothetical protein.)
genome : 38,894,549 - 38,898,740 (4,192)
query : 1 - 1,601 (1,601/1,601)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 21.1667, cyto 19, cyto_plas 12.1667, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170394)
HIX0170394
HIT000712994_02 (
ENST00000601254
)
(Hypothetical protein.)
genome : 38,894,552 - 38,897,746 (3,195)
query : 1 - 604 (604/604)
4 exons
identity = 0.954
5'(0.952;0.941;0.944;0.964)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 13.5, nucl 4.5, plas 2, extr 2,
mito 2, extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170394)
HIX0209388
HIT000316507_03 (
NM_001008388
)
(Iron sulphur domain-containing, mitoNEET, N-terminal containing protein.)
genome : 38,910,385 - 38,915,842 (5,458)
query : 425 - 5,892 (5,468/5,892)
1 exon
identity = 0.952
5'(0.952)3'
coverage = 0.928
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13.5, cyto_mito 9.5, plas 5, cyto 4.5, pero 4,
nucl 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209388)
HIX0209388
HIT000509671_03 (
ENST00000411737
)
(Non-protein coding transcript.)
genome : 38,910,375 - 38,910,472 (98)
query : 1 - 98 (98/98)
1 exon
identity = 0.959
5'(0.959)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209388)
HIX0219046
HIT000678622_01 (
ENST00000565549
)
(Hypothetical protein.)
genome : 38,911,691 - 38,915,842 (4,152)
query : 1 - 4,147 (4,147/4,147)
1 exon
identity = 0.968
3'(0.968)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 7.5, cyto 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219046)
HIX0170820
HIT000526388 (
ENST00000428454
)
(Conserved hypothetical protein.)
genome : 38,929,039 - 38,931,213 (2,175)
query : 1 - 2,175 (2,175/2,175)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 3, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170820)
HIX0170360
HIT000609469_03 (
ENST00000509614
)
(Hypothetical protein.)
genome : 38,934,082 - 38,943,409 (9,328)
query : 3 - 391 (389/391)
3 exons
identity = 0.985
3'(0.983;0.982;1.000)5'
coverage = 0.995
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10, extr 9, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170360)
HIX0170360
HIT000612289_02 (
ENST00000512651
)
(Hypothetical protein.)
genome : 38,934,088 - 38,965,210 (31,123)
query : 1 - 406 (406/406)
2 exons
identity = 0.966
3'(0.983;0.943)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11, extr 8, nucl 4, pero 4, E.R. 2.5,
E.R._mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170360)
HIX0170360
HIT000127081_04 (
ENST00000331172
)
(Cation/H+ exchanger domain containing protein.)
genome : 38,934,088 - 38,965,209 (31,122)
query : 1 - 908 (908/908)
6 exons
identity = 0.964
3'(0.974;0.978;0.982;0.940;0.935;0.966)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170360)
HIX0170360
HIT000550601_01 (
ENST00000452667
)
(Hypothetical protein.)
genome : 38,934,102 - 38,982,199 (48,098)
query : 1 - 1,334 (1,334/1,334)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24.5, extr_plas 13, golg 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170360)
HIX0170360
HIT000676083_01 (
ENST00000562908
)
(Cation/H+ exchanger domain containing protein.)
genome : 38,934,105 - 38,982,203 (48,099)
query : 1 - 1,389 (1,389/1,389)
9 exons
identity = 0.968
3'(0.953;0.993;0.991;0.993;0.935;0.955;0.978;
0.979;0.944)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170360)
HIX0170360
HIT000610979_02 (
ENST00000511253
)
(Cation/H+ exchanger domain containing protein.)
genome : 38,939,184 - 38,944,468 (5,285)
query : 1 - 629 (629/629)
3 exons
identity = 0.964
3'(0.960;0.980;0.955)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, plas 3, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170360)
HIX0201521
HIT000546374 (
ENST00000448440
)
(Actin-related protein 3B isoform 2.)
genome : 38,989,555 - 38,991,033 (1,479)
query : 1 - 1,479 (1,479/1,479)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 8, cyto 8, mito 5, E.R._mito 4.33333, nucl 4,
cyto_golg 4, mito_pero 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201521)
HIX0201521
HIT000603344_02 (
ENST00000503033
)
(Actin-related protein 3B isoform 2.)
genome : 38,989,555 - 38,990,929 (1,375)
query : 1 - 1,244 (1,244/1,244)
2 exons
identity = 0.967
5'(0.977;0.967)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 11, cyto_nucl 7.5, extr 5, nucl 2,
pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201521)
HIX0201521
HIT000726229_02 (
NR_045000
)
(Actin-related protein 3B isoform 2.)
genome : 38,989,727 - 38,991,372 (1,646)
query : 1 - 1,646 (1,646/1,646)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 8, cyto 8, mito 5, E.R._mito 4.33333, nucl 4,
cyto_golg 4, mito_pero 3.83333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201521)
HIX0201521
HIT000678650_01 (
ENST00000565577
)
(Actin-related protein 3C precursor.)
genome : 38,989,952 - 38,990,929 (978)
query : 1 - 979 (979/979)
1 exon
identity = 0.980
5'(0.980)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 15, nucl 4.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201521)
HIX0201521
HIT000483692_04 (
ENST00000400789
)
(Actin-related protein 3C precursor.)
genome : 38,990,022 - 38,991,358 (1,337)
query : 1 - 1,338 (1,338/1,338)
1 exon
identity = 0.981
5'(0.981)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 8, cyto 8, mito 5.5, E.R._mito 5.33333,
mito_pero 4.16667, nucl 4, cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201521)
HIX0201521
HIT000542760_03 (
ENST00000444826
)
(Actin-related protein 3C precursor.)
genome : 38,990,022 - 38,991,358 (1,337)
query : 1 - 1,338 (1,338/1,338)
1 exon
identity = 0.980
5'(0.980)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 8, cyto 8, mito 5, E.R._mito 4.33333, nucl 4,
cyto_golg 4, mito_pero 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201521)
HIX0201521
HIT000083231
(
AY026352
)
Representative transcript
(Actin-related protein 3C precursor.)
genome : 38,990,037 - 38,991,356 (1,320)
query : 1 - 1,320 (1,320/1,320)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR004000 : Actin family
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 8, cyto 8, mito 5, E.R._mito 4.33333, nucl 4,
cyto_golg 4, mito_pero 3.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201521)
Ortholog candidate ( ->
Evola
)
Oryzias
sp. (Medaka) : ENSORLT00000004879
Pan
sp. (Chimpanzee) : XR_020841
HIX0201521
HIT000640192_02 (
ENST00000541147
)
(Actin-related protein 3C precursor.)
genome : 38,990,037 - 38,991,356 (1,320)
query : 1 - 1,320 (1,320/1,320)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 8, cyto 8, mito 5, E.R._mito 4.33333, nucl 4,
cyto_golg 4, mito_pero 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201521)
HIX0201521
HIT000640598_02 (
ENST00000541553
)
(Actin-related protein 3B; ARP3-beta; Actin-like protein 3B; Actin-related protein ARP4;)
genome : 38,990,073 - 38,990,654 (582)
query : 1 - 582 (582/582)
1 exon
identity = 0.978
5'(0.978)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 12.5, mito 4, extr 3,
mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201521)
HIX0035359
HIT000521811_01 (
ENST00000423877
)
(Hypothetical protein.)
genome : 39,006,326 - 39,012,360 (6,035)
query : 1 - 246 (246/246)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035359)
HIX0035359
HIT000676030_01 (
ENST00000562853
)
(Hypothetical protein.)
genome : 39,006,330 - 39,012,359 (6,030)
query : 3 - 231 (229/242)
3 exons
identity = 0.970
5'(0.977;0.985;0.948)3'
coverage = 0.946
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035359)
HIX0219048
HIT000680473_02 (
ENST00000567464
)
(Hypothetical protein.)
genome : 39,042,175 - 39,043,327 (1,153)
query : 1 - 560 (560/560)
2 exons
identity = 0.950
3'(0.967;0.940)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219048)
HIX0170750
HIT000519025_06 (
ENST00000421091
)
(Zinc finger, B-box domain containing protein.)
genome : 39,055,226 - 39,055,624 (399)
query : 1 - 399 (399/399)
1 exon
identity = 0.980
3'(0.980)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170750)
HIX0170750
HIT000521392 (
ENST00000423458
)
(Zinc finger, B-box domain containing protein.)
genome : 39,055,226 - 39,055,622 (397)
query : 1 - 397 (397/397)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170750)
HIX0170750
HIT000539853_03 (
ENST00000441919
)
(Zinc finger, B-box domain containing protein.)
genome : 39,055,244 - 39,055,624 (381)
query : 1 - 381 (381/381)
1 exon
identity = 0.976
3'(0.976)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170750)
HIX0170750
HIT000543314_06 (
ENST00000445380
)
(Zinc finger, B-box domain containing protein.)
genome : 39,055,272 - 39,055,624 (353)
query : 1 - 353 (353/353)
1 exon
identity = 0.980
3'(0.980)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170750)
HIX0170812
HIT000525798 (
ENST00000427864
)
(Conserved hypothetical protein.)
genome : 39,076,135 - 39,076,239 (105)
query : 1 - 105 (105/105)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 16.6667, cyto_plas 11.6667, extr 6,
nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170812)
HIX0219127
HIT000562673 (
NR_024497
)
(Conserved hypothetical protein.)
genome : 38,717,074 - 38,741,081 (24,008)
query : 1 - 5,253 (5,253/5,270)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 16, cyto 9.5, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219127)
HIX0190575
pHIT000017431 ( pHIT000017431 )
Representative transcript
(Conserved hypothetical protein.)
genome : 38,107,896 - 38,108,846 (951)
query : 1 - 951 (951/951)
1 exon
InterPro :
IPR008271 : Serine/threonine-protein kinase, active site
IPR027086 : Serine/threonine-protein kinase TOUSLED-like 2
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005634 : Cellular Component : nucleus
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190575)
CAGE tag :
H04BA95H1506,H05BA46H1110,H05BB73G1806
H05BC29E1902,H05BD67P0506
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000002648
Tetraodon
sp. (Tetraodon) : GSTENT00021801001
Macaca
sp. (Macaque) : XR_011725
Pan
sp. (Chimpanzee) : XR_023557
HIX0190682
pHIT000017436 ( pHIT000017436 )
Representative transcript
(Conserved hypothetical protein.)
genome : 38,349,700 - 38,357,553 (7,854)
query : 1 - 684 (684/684)
4 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190682)
CAGE tag :
H09BA66B1810,H09BA91C0404,H10BA96J0108
H21BB41J1604,H22BA20M1410
AL357148.22
37500001-37507938 F +
NCBI
AL157387.9
37507939-37655668 F +
NCBI
AL391686.10
37655669-37713606 F +
NCBI
AL133350.16
37713607-37803339 F +
NCBI
AL121927.24
37803340-37922560 F +
NCBI
AL132657.33
37922561-38083203 F +
NCBI
AL135791.12
38083204-38150078 F +
NCBI
AL132659.10
38150079-38178483 F +
NCBI
AL117337.26
38178484-38339835 F +
NCBI
AL161931.13
38339836-38359588 F +
NCBI
AL117339.10
38359589-38568130 F +
NCBI
AL132658.10
38568131-38588120 F +
NCBI
AL133217.5
38588121-38652100 F +
NCBI
AL133216.10
38652101-38818835 F +
NCBI
50000
38818836-38868835 N
AL133173.20
38868836-39075027 F -
NCBI
AL590623.16
39075028-39100000 F -
NCBI