bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0020961
HIT000021570_04
(
AK096715
)
(Hypothetical protein.)
genome : 47,746,962 - 48,279,199 (532,238)
query : 1 - 1,962 (1,962/1,962)
2 exons
identity = 0.989
5'(0.989)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 3, nucl 2, cyto 2, cyto_nucl 2,
mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020961)
HIX0170375
HIT000524544 (
ENST00000426610
)
(Neutral/alkaline nonlysosomal ceramidase family protein.)
genome : 48,001,603 - 48,055,018 (53,416)
query : 1 - 2,050 (2,050/2,050)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 5, mito 4, mito_pero 4, plas 2.5,
pero 2, golg 2, extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170375)
HIX0170375
HIT000518013 (
ENST00000420079
)
(Neutral/alkaline nonlysosomal ceramidase family protein.)
genome : 48,001,781 - 48,050,538 (48,758)
query : 1 - 1,841 (1,841/1,841)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 7.5, mito_pero 7.5, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170375)
HIX0170416
HIT000537710_02 (
ENST00000439776
)
(Hypothetical short protein.)
genome : 48,139,532 - 48,150,303 (10,772)
query : 1 - 828 (828/828)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170416)
HIX0170416
HIT000553968_02 (
ENST00000456034
)
(Hypothetical short protein.)
genome : 48,149,037 - 48,150,184 (1,148)
query : 1 - 491 (491/491)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 8.5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170416)
HIX0058839
HIT000427975
(
AK309109
)
Representative transcript
(Cathepsin L1; EC=3.4.22.15; Major excreted protein; MEP; Contains: Cathepsin L1 heavy chain; Contains: Cathepsin L1 light chain; Precursor;)
genome : 48,155,943 - 48,158,691 (2,749)
query : 1 - 1,105 (1,105/1,105)
4 exons
identity = 0.994
5'(0.994;1.000;1.000;0.991)3'
coverage = 1.000
EC number :
EC 3.4.22.15
InterPro :
IPR013128 : Peptidase C1A
IPR013201 : Proteinase inhibitor I29, cathepsin propeptide
GO :
0008234 : Molecular Function : cysteine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 12.5, extr 6, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058839)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XR_019691
HIX0058839
HIT000658818 (
NR_033407
)
(Cathepsin L1; EC=3.4.22.15; Major excreted protein; MEP; Contains: Cathepsin L1 heavy chain; Contains: Cathepsin L1 light chain; Precursor;)
genome : 48,155,943 - 48,158,691 (2,749)
query : 1 - 1,105 (1,105/1,105)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.22.15
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 12.5, extr 6, nucl 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058839)
HIX0058839
HIT000521709_02 (
ENST00000423775
)
(Cathepsin L1; EC=3.4.22.15; Major excreted protein; MEP; Contains: Cathepsin L1 heavy chain; Contains: Cathepsin L1 light chain; Precursor;)
genome : 48,157,032 - 48,158,151 (1,120)
query : 1 - 403 (403/403)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.22.15
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12, extr 7, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058839)
HIX0058839
HIT000525991_02 (
ENST00000428057
)
(Cathepsin L1; EC=3.4.22.15; Major excreted protein; MEP; Contains: Cathepsin L1 heavy chain; Contains: Cathepsin L1 light chain; Precursor;)
genome : 48,157,041 - 48,158,148 (1,108)
query : 1 - 391 (391/391)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.22.15
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12, extr 7, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058839)
HIX0058839
HIT000692416_02 (
ENST00000580501
)
(Cathepsin L1; EC=3.4.22.15; Major excreted protein; MEP; Contains: Cathepsin L1 heavy chain; Contains: Cathepsin L1 light chain; Precursor;)
genome : 48,157,041 - 48,158,148 (1,108)
query : 1 - 391 (391/391)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.22.15
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12, extr 7, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058839)
HIX0058839
HIT000192636_04
(
L25628
)
(Cathepsin L1; EC=3.4.22.15; Major excreted protein; MEP; Contains: Cathepsin L1 heavy chain; Contains: Cathepsin L1 light chain; Precursor;)
genome : 48,157,090 - 48,157,903 (814)
query : 1 - 196 (196/208)
2 exons
identity = 0.995
5'(1.000;0.992)3'
coverage = 0.942
EC number :
EC 3.4.22.15
InterPro :
IPR013128 : Peptidase C1A
GO :
0008234 : Molecular Function : cysteine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058839)
HIX0170708
HIT000517938 (
ENST00000420004
)
(Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain containing protein.)
genome : 48,169,665 - 48,175,810 (6,146)
query : 1 - 255 (255/255)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, cyto_nucl 14.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170708)
HIX0170708
HIT000696922 (
ENST00000585063
)
(Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain containing protein.)
genome : 48,169,665 - 48,175,810 (6,146)
query : 1 - 255 (255/255)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, cyto_nucl 14.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170708)
HIX0170333
HIT000482522 (
ENST00000399452
)
(Mitogen-activated protein (MAP) kinase phosphatase family protein.)
genome : 48,173,347 - 48,175,106 (1,760)
query : 1 - 1,760 (1,760/1,760)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10.5, extr_plas 9, plas 6.5, cyto 6, pero 4,
nucl 3, cyto_mito 3, cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170333)
HIX0170333
HIT000693905 (
ENST00000582007
)
(Mitogen-activated protein (MAP) kinase phosphatase family protein.)
genome : 48,173,347 - 48,175,106 (1,760)
query : 1 - 1,760 (1,760/1,760)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10.5, extr_plas 9, plas 6.5, cyto 6, pero 4,
nucl 3, cyto_mito 3, cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170333)
HIX0170498
HIT000441765_07
(
DQ575234
)
Representative transcript
(Non-protein coding transcript.)
genome : 48,184,843 - 48,184,871 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170498)
HIX0008796
HIT000562671_02 (
NR_024495
)
(Elongation factor, GTP-binding domain containing protein.)
genome : 48,185,839 - 48,203,779 (17,941)
query : 1 - 4,695 (4,695/4,704)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto_nucl 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000727368_02 (
NR_072978
)
(Elongation factor, GTP-binding domain containing protein.)
genome : 48,185,839 - 48,203,779 (17,941)
query : 1 - 4,695 (4,695/4,704)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto_nucl 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000427890_04
(
AK309024
)
(Elongation factor, GTP-binding domain containing protein.)
genome : 48,185,848 - 48,216,004 (30,157)
query : 1 - 1,241 (1,241/1,241)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000795 : Elongation factor, GTP-binding domain
GO :
0003924 : Molecular Function : GTPase activity
0005525 : Molecular Function : GTP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000529774_02 (
ENST00000431840
)
(Elongation factor, GTP-binding domain containing protein.)
genome : 48,185,848 - 48,216,004 (30,157)
query : 1 - 1,241 (1,241/1,241)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000087091_04
(
BC008503
)
(Hypothetical short protein.)
genome : 48,185,856 - 48,186,659 (804)
query : 1 - 804 (804/833)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000265655
(
BC075841
)
Representative transcript
(Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 8; AGAP-8; Centaurin-gamma-like family member 5;)
genome : 48,185,879 - 48,237,584 (51,706)
query : 1 - 3,750 (3,750/3,770)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001164 : Arf GTPase activating protein
IPR001849 : Pleckstrin homology domain
IPR020683 : Ankyrin repeat-containing domain
GO :
0008060 : Molecular Function : ARF GTPase activator activity
0008270 : Molecular Function : zinc ion binding
0032312 : Biological Process : regulation of ARF GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000099302_04
(
BC051298
)
(Ribosome biogenesis protein BMS1 homolog; Ribosome assembly protein BMS1 homolog;)
genome : 48,187,408 - 48,200,979 (13,572)
query : 10 - 1,861 (1,852/1,878)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.996)3'
coverage = 0.995
InterPro :
IPR000795 : Elongation factor, GTP-binding domain
GO :
0003924 : Molecular Function : GTPase activity
0005525 : Molecular Function : GTP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000631945_02 (
ENST00000532854
)
(Elongation factor, GTP-binding domain containing protein.)
genome : 48,187,408 - 48,200,985 (13,578)
query : 1 - 1,858 (1,858/1,858)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000554666 (
ENST00000456732
)
(Elongation factor, GTP-binding domain containing protein.)
genome : 48,187,416 - 48,199,256 (11,841)
query : 1 - 1,331 (1,331/1,331)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000692084 (
ENST00000580164
)
(Elongation factor, GTP-binding domain containing protein.)
genome : 48,187,416 - 48,199,256 (11,841)
query : 1 - 1,331 (1,331/1,331)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000556278 (
ENST00000458344
)
(Elongation factor, GTP-binding domain containing protein.)
genome : 48,187,429 - 48,199,256 (11,828)
query : 1 - 1,318 (1,318/1,318)
9 exons
identity = 0.998
5'(0.989;1.000;0.988;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto_nucl 3.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000714173 (
ENST00000602440
)
(Elongation factor, GTP-binding domain containing protein.)
genome : 48,187,429 - 48,199,256 (11,828)
query : 1 - 1,318 (1,318/1,318)
9 exons
identity = 0.997
5'(0.989;0.995;0.988;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto_nucl 3.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000548294 (
ENST00000450360
)
(Elongation factor, GTP-binding domain containing protein.)
genome : 48,187,443 - 48,199,285 (11,843)
query : 1 - 1,333 (1,333/1,333)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000511127_02 (
ENST00000413193
)
(Arf GTPase activating protein family protein.)
genome : 48,189,612 - 48,237,508 (47,897)
query : 1 - 2,410 (2,410/2,410)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 17, cyto 10.5, mito_nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000551853_02 (
ENST00000453919
)
(Arf GTPase activating protein family protein.)
genome : 48,189,612 - 48,237,508 (47,897)
query : 1 - 2,410 (2,410/2,410)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 17, cyto 10.5, mito_nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000696205_02 (
ENST00000584334
)
(Arf GTPase activating protein family protein.)
genome : 48,189,612 - 48,237,508 (47,897)
query : 1 - 2,410 (2,410/2,410)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 17, cyto 10.5, mito_nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000019546_04
(
AK094691
)
(Hypothetical protein.)
genome : 48,199,755 - 48,201,872 (2,118)
query : 1 - 2,118 (2,118/2,118)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, cyto 4, plas 2, cyto_nucl 2, cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000096684_04
(
BC041413
)
(Hypothetical protein.)
genome : 48,202,057 - 48,204,691 (2,635)
query : 6 - 2,641 (2,636/2,656)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3.5, extr 3, cyto_nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000452015_08
(
DQ585484
)
(Non-protein coding transcript.)
genome : 48,202,830 - 48,202,859 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0170538
HIT000463976_07
(
DQ597445
)
Representative transcript
(Non-protein coding transcript.)
genome : 48,205,092 - 48,205,122 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170538)
HIX0008796
HIT000249875_03
(
AK160375
)
(Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 8; AGAP-8; Centaurin-gamma-like family member 5;)
genome : 48,206,527 - 48,237,586 (31,060)
query : 1 - 5,381 (5,381/5,381)
10 exons
identity = 0.996
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993)3'
coverage = 1.000
InterPro :
IPR001164 : Arf GTPase activating protein
IPR001849 : Pleckstrin homology domain
IPR020683 : Ankyrin repeat-containing domain
GO :
0008060 : Molecular Function : ARF GTPase activator activity
0008270 : Molecular Function : zinc ion binding
0032312 : Biological Process : regulation of ARF GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 17, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0209356
HIT000615743_02 (
ENST00000516340
)
(Non-protein coding transcript.)
genome : 48,206,895 - 48,207,010 (116)
query : 1 - 116 (116/116)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209356)
HIX0209356
HIT000616348_02 (
ENST00000516945
)
(Non-protein coding transcript.)
genome : 48,206,895 - 48,207,010 (116)
query : 1 - 116 (116/116)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209356)
HIX0209356
HIT000616471_02 (
ENST00000517068
)
(Non-protein coding transcript.)
genome : 48,206,895 - 48,207,010 (116)
query : 1 - 116 (116/116)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209356)
HIX0209356
HIT000690851_02 (
ENST00000578915
)
(Non-protein coding transcript.)
genome : 48,206,895 - 48,207,010 (116)
query : 1 - 116 (116/116)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209356)
HIX0209356
HIT000693633_02 (
ENST00000581731
)
(Non-protein coding transcript.)
genome : 48,206,895 - 48,207,010 (116)
query : 1 - 116 (116/116)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209356)
HIX0008796
HIT000092682_04
(
BC032492
)
(Hypothetical protein.)
genome : 48,209,406 - 48,209,766 (361)
query : 1 - 361 (361/433)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 3, cyto 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000090273_04
(
BC020871
)
(Hypothetical protein.)
genome : 48,209,573 - 48,211,265 (1,693)
query : 1 - 1,692 (1,692/1,720)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, extr 11, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000503576_02
(
BC171845
)
(Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 8; AGAP-8; Centaurin-gamma-like family member 5;)
genome : 48,215,724 - 48,237,508 (21,785)
query : 1 - 2,387 (2,387/2,387)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 1.000
InterPro :
IPR001164 : Arf GTPase activating protein
IPR001849 : Pleckstrin homology domain
IPR020683 : Ankyrin repeat-containing domain
GO :
0008060 : Molecular Function : ARF GTPase activator activity
0008270 : Molecular Function : zinc ion binding
0032312 : Biological Process : regulation of ARF GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 14, cyto 6, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000503578
(
BC171847
)
(Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 8; AGAP-8; Centaurin-gamma-like family member 5;)
genome : 48,215,724 - 48,237,508 (21,785)
query : 1 - 2,756 (2,756/2,756)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001164 : Arf GTPase activating protein
IPR001849 : Pleckstrin homology domain
IPR020683 : Ankyrin repeat-containing domain
GO :
0008060 : Molecular Function : ARF GTPase activator activity
0008270 : Molecular Function : zinc ion binding
0032312 : Biological Process : regulation of ARF GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 13.5, cyto 7, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000550079_02 (
ENST00000452145
)
(Arf GTPase activating protein family protein.)
genome : 48,215,724 - 48,237,508 (21,785)
query : 1 - 2,387 (2,387/2,387)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 14, cyto 6, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000655677_02 (
NM_001190810
)
(Arf GTPase activating protein family protein.)
genome : 48,215,724 - 48,237,508 (21,785)
query : 1 - 2,387 (2,387/2,387)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 14, cyto 6, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000694193_02 (
ENST00000582299
)
(Arf GTPase activating protein family protein.)
genome : 48,215,724 - 48,237,508 (21,785)
query : 1 - 2,387 (2,387/2,387)
8 exons
identity = 0.993
5'(0.994;1.000;0.986;1.000;1.000;1.000;1.000;
0.992)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 14, cyto 6, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000554918_02 (
ENST00000456984
)
(Arf GTPase activating protein family protein.)
genome : 48,215,836 - 48,237,210 (21,375)
query : 1 - 1,977 (1,977/1,977)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 14, cyto 6, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0008796
HIT000693236 (
ENST00000581330
)
(Arf GTPase activating protein family protein.)
genome : 48,215,836 - 48,237,210 (21,375)
query : 1 - 1,977 (1,977/1,977)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 14, cyto 6, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008796)
HIX0209340
HIT000465122_07
(
DQ598591
)
Representative transcript
(Non-protein coding transcript.)
genome : 48,236,481 - 48,236,510 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209340)
HIX0209340
HIT000454754_07
(
DQ588223
)
(Non-protein coding transcript.)
genome : 48,236,481 - 48,236,509 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209340)
HIX0170909
HIT000532467_02 (
ENST00000434533
)
(Hypothetical short protein.)
genome : 48,237,167 - 48,243,150 (5,984)
query : 1 - 234 (234/234)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170909)
HIX0170432
HIT000021763_04
(
AK096908
)
Representative transcript
(Hypothetical protein.)
genome : 48,238,302 - 48,239,674 (1,373)
query : 1 - 1,376 (1,376/1,376)
1 exon
identity = 0.987
5'(0.987)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, mito 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170432)
HIX0170480
HIT000389414_04
(
BC127791
)
Representative transcript
(FAM25 family protein.)
genome : 48,247,586 - 48,252,112 (4,527)
query : 1 - 2,350 (2,350/2,350)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR023243 : FAM25
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 9.5, extr 8, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170480)
HIX0008798
HIT000560420_02 (
NM_001137548
)
(FAM25 family protein.)
genome : 48,247,662 - 48,252,126 (4,465)
query : 1 - 335 (335/335)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000560421_02 (
NM_001137549
)
(FAM25 family protein.)
genome : 48,247,662 - 48,252,126 (4,465)
query : 1 - 335 (335/335)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000560427_02 (
NM_001137556
)
(FAM25 family protein.)
genome : 48,247,662 - 48,252,126 (4,465)
query : 1 - 335 (335/335)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000503225_02
(
BC146972
)
(FAM25 family protein.)
genome : 48,247,662 - 48,252,110 (4,449)
query : 1 - 319 (319/319)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR023243 : FAM25
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000503237_02
(
BC146989
)
(FAM25 family protein.)
genome : 48,247,662 - 48,252,110 (4,449)
query : 1 - 319 (319/319)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR023243 : FAM25
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000503238_02
(
BC146990
)
(FAM25 family protein.)
genome : 48,247,662 - 48,252,110 (4,449)
query : 1 - 319 (319/319)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR023243 : FAM25
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000503239_02
(
BC146991
)
(FAM25 family protein.)
genome : 48,247,662 - 48,252,110 (4,449)
query : 1 - 319 (319/319)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR023243 : FAM25
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000503268_02
(
BC147022
)
(FAM25 family protein.)
genome : 48,247,662 - 48,252,110 (4,449)
query : 1 - 319 (319/319)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR023243 : FAM25
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000503602_02
(
BC171871
)
(FAM25 family protein.)
genome : 48,247,662 - 48,252,110 (4,449)
query : 1 - 319 (319/319)
3 exons
identity = 0.997
5'(1.000;0.984;1.000)3'
coverage = 1.000
InterPro :
IPR023243 : FAM25
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000503272_02
(
BC147026
)
(FAM25 family protein.)
genome : 48,247,662 - 48,252,101 (4,440)
query : 1 - 310 (310/310)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR023243 : FAM25
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000503211_02
(
BC146955
)
(FAM25 family protein.)
genome : 48,247,665 - 48,252,126 (4,462)
query : 1 - 332 (332/332)
3 exons
identity = 0.997
5'(0.990;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR023243 : FAM25
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001161303
HIX0008798
HIT000503222_02
(
BC146968
)
(FAM25 family protein.)
genome : 48,247,665 - 48,252,126 (4,462)
query : 1 - 332 (332/332)
3 exons
identity = 0.997
5'(0.990;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR023243 : FAM25
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000550201_02 (
ENST00000452267
)
(FAM25 family protein.)
genome : 48,247,669 - 48,252,143 (4,475)
query : 1 - 345 (345/345)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000555554_02 (
ENST00000457620
)
(FAM25 family protein.)
genome : 48,247,669 - 48,252,143 (4,475)
query : 1 - 345 (345/345)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000696681_02 (
ENST00000584817
)
(FAM25 family protein.)
genome : 48,247,669 - 48,252,143 (4,475)
query : 1 - 345 (345/345)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000135393_05 (
ENST00000342763
)
(FAM25 family protein.)
genome : 48,247,669 - 48,252,099 (4,431)
query : 1 - 301 (301/301)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000691075_02 (
ENST00000579142
)
(FAM25 family protein.)
genome : 48,247,669 - 48,252,099 (4,431)
query : 1 - 301 (301/301)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000570873_02 (
ENST00000466209
)
(FAM25 family protein.)
genome : 48,248,922 - 48,252,143 (3,222)
query : 1 - 407 (407/407)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000696858_02 (
ENST00000584996
)
(FAM25 family protein.)
genome : 48,248,922 - 48,252,143 (3,222)
query : 1 - 407 (407/407)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000585158_02 (
ENST00000481177
)
(FAM25 family protein.)
genome : 48,248,955 - 48,252,143 (3,189)
query : 1 - 374 (374/374)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000714112 (
ENST00000602379
)
(Annexin A8; Annexin VIII; Annexin-8; Vascular anticoagulant-beta; VAC-beta;)
genome : 48,249,334 - 48,262,214 (12,881)
query : 1 - 497 (497/497)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 9.5, cyto_nucl 7.5, cyto 4.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000714447 (
ENST00000602714
)
(Annexin A8; Annexin VIII; Annexin-8; Vascular anticoagulant-beta; VAC-beta;)
genome : 48,249,334 - 48,262,214 (12,881)
query : 1 - 497 (497/497)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 9.5, cyto_nucl 7.5, cyto 4.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000725009 (
NM_001271702
)
(Annexin A8; Annexin VIII; Annexin-8; Vascular anticoagulant-beta; VAC-beta;)
genome : 48,255,204 - 48,271,367 (16,164)
query : 1 - 2,175 (2,175/2,205)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, mito 10, cyto_nucl 10
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000725010 (
NM_001271703
)
(Annexin A8; Annexin VIII; Annexin-8; Vascular anticoagulant-beta; VAC-beta;)
genome : 48,255,204 - 48,271,367 (16,164)
query : 1 - 1,875 (1,875/1,905)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, mito 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000366655 (
NM_001040084
)
(Annexin A8; Annexin VIII; Annexin-8; Vascular anticoagulant-beta; VAC-beta;)
genome : 48,255,204 - 48,271,367 (16,164)
query : 1 - 2,061 (2,061/2,070)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000493385
(
AK298761
)
(Annexin A8; Annexin VIII; Annexin-8; Vascular anticoagulant-beta; VAC-beta;)
genome : 48,255,224 - 48,270,670 (15,447)
query : 1 - 1,344 (1,344/1,344)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR009115 : Annexin, type VIII
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000311531 (
ENST00000357718
)
(Annexin A8; Annexin VIII; Annexin-8; Vascular anticoagulant-beta; VAC-beta;)
genome : 48,255,253 - 48,271,369 (16,117)
query : 1 - 1,861 (1,861/1,861)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000695752 (
ENST00000583874
)
(Annexin A8; Annexin VIII; Annexin-8; Vascular anticoagulant-beta; VAC-beta;)
genome : 48,255,253 - 48,271,369 (16,117)
query : 1 - 1,861 (1,861/1,861)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000311883 (
ENST00000358140
)
(Annexin A8 isoform 3.)
genome : 48,255,254 - 48,271,369 (16,116)
query : 1 - 1,860 (1,860/1,860)
9 exons
identity = 0.998
5'(1.000;0.989;1.000;1.000;1.000;1.000;1.000;
1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27.5, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000264983
(
BC073755
)
(Annexin A8; Annexin VIII; Annexin-8; Vascular anticoagulant-beta; VAC-beta;)
genome : 48,255,273 - 48,271,367 (16,095)
query : 1 - 1,992 (1,992/2,022)
12 exons
identity = 0.997
5'(1.000;1.000;0.989;0.991;1.000;1.000;0.967;
1.000;1.000;0.983;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR009115 : Annexin, type VIII
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.8333, cyto_pero 12.6667,
nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000327138
(
Z36830
)
(Annexin A8; Annexin VIII; Annexin-8; Vascular anticoagulant-beta; VAC-beta;)
genome : 48,255,293 - 48,262,269 (6,977)
query : 1 - 443 (443/445)
4 exons
identity = 0.991
5'(1.000;1.000;0.978;0.981)3'
coverage = 0.996
InterPro :
IPR001464 : Annexin
IPR009115 : Annexin, type VIII
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 16.5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000491600_02
(
AK296976
)
(Annexin A8; Annexin VIII; Annexin-8; Vascular anticoagulant-beta; VAC-beta;)
genome : 48,255,300 - 48,261,706 (6,407)
query : 1 - 1,213 (1,213/1,213)
3 exons
identity = 0.998
5'(1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR018502 : Annexin repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 5, extr 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000714087 (
ENST00000602354
)
(Annexin A8; Annexin VIII; Annexin-8; Vascular anticoagulant-beta; VAC-beta;)
genome : 48,255,300 - 48,261,706 (6,407)
query : 1 - 1,213 (1,213/1,213)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 5, extr 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000714610 (
ENST00000602877
)
(Annexin A8; Annexin VIII; Annexin-8; Vascular anticoagulant-beta; VAC-beta;)
genome : 48,255,300 - 48,261,706 (6,407)
query : 1 - 1,213 (1,213/1,213)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 5, extr 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000031901
(
BC004376
)
Representative transcript
(Annexin A8; Annexin VIII; Annexin-8; Vascular anticoagulant-beta; VAC-beta;)
genome : 48,255,307 - 48,271,362 (16,056)
query : 1 - 1,953 (1,953/1,975)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR009115 : Annexin, type VIII
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.8333, cyto_pero 12.6667,
nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC030407
Rattus
sp. (Rat) : BC099106
Bos
sp. (Cow) : BT021645
Pan
sp. (Chimpanzee) : ENSPTRT00000042157
Macaca
sp. (Macaque) : XM_001083294
Equus
sp. (Horse) : XM_001500694
HIX0008798
HIT000137046 (
ENST00000344416
)
(Annexin A8; Annexin VIII; Annexin-8; Vascular anticoagulant-beta; VAC-beta;)
genome : 48,255,307 - 48,271,363 (16,057)
query : 1 - 1,954 (1,954/1,954)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.8333, cyto_pero 12.6667,
nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000312763 (
ENST00000359178
)
(Annexin A8 isoform 3.)
genome : 48,255,307 - 48,271,363 (16,057)
query : 1 - 1,954 (1,954/1,954)
12 exons
identity = 0.998
5'(1.000;0.989;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14.8333, cyto_pero 12.1667,
nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000485325 (
NM_001098845
)
(Annexin A8 isoform 3.)
genome : 48,255,307 - 48,271,363 (16,057)
query : 1 - 1,954 (1,954/1,954)
12 exons
identity = 0.998
5'(1.000;0.989;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14.8333, cyto_pero 12.1667,
nucl 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000697139 (
ENST00000585281
)
(Annexin A8; Annexin VIII; Annexin-8; Vascular anticoagulant-beta; VAC-beta;)
genome : 48,255,307 - 48,271,363 (16,057)
query : 1 - 1,954 (1,954/1,954)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.8333, cyto_pero 12.6667,
nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000494782
(
AK300158
)
(Annexin A8; Annexin VIII; Annexin-8; Vascular anticoagulant-beta; VAC-beta;)
genome : 48,255,346 - 48,270,821 (15,476)
query : 1 - 1,171 (1,171/1,171)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR009115 : Annexin, type VIII
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 13.3333, cyto_pero 13.3333, extr 3,
nucl 2.5, pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000634919 (
ENST00000535874
)
(Annexin A8; Annexin VIII; Annexin-8; Vascular anticoagulant-beta; VAC-beta;)
genome : 48,255,346 - 48,270,821 (15,476)
query : 1 - 1,171 (1,171/1,171)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 13.3333, cyto_pero 13.3333, extr 3,
nucl 2.5, pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000644343 (
ENST00000545298
)
(Annexin A8 isoform 1.)
genome : 48,255,346 - 48,270,821 (15,476)
query : 1 - 1,171 (1,171/1,171)
12 exons
identity = 0.998
5'(1.000;0.989;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.993;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 13.3333, cyto_pero 13.3333, extr 3,
nucl 2.5, pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000689763 (
ENST00000577813
)
(Annexin A8; Annexin VIII; Annexin-8; Vascular anticoagulant-beta; VAC-beta;)
genome : 48,255,346 - 48,270,821 (15,476)
query : 1 - 1,171 (1,171/1,171)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 13.3333, cyto_pero 13.3333, extr 3,
nucl 2.5, pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000491197
(
AK296573
)
(Annexin A8; Annexin VIII; Annexin-8; Vascular anticoagulant-beta; VAC-beta;)
genome : 48,255,353 - 48,270,820 (15,468)
query : 1 - 1,179 (1,179/1,179)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR009115 : Annexin, type VIII
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, cyto 10, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000554045 (
ENST00000456111
)
(Annexin A8; Annexin VIII; Annexin-8; Vascular anticoagulant-beta; VAC-beta;)
genome : 48,255,353 - 48,270,820 (15,468)
query : 1 - 1,179 (1,179/1,179)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, cyto 10, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000695789 (
ENST00000583911
)
(Annexin A8; Annexin VIII; Annexin-8; Vascular anticoagulant-beta; VAC-beta;)
genome : 48,255,353 - 48,270,820 (15,468)
query : 1 - 1,179 (1,179/1,179)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, cyto 10, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000494763
(
AK300139
)
(Annexin A8 isoform 3.)
genome : 48,255,353 - 48,270,783 (15,431)
query : 1 - 1,442 (1,442/1,442)
12 exons
identity = 0.999
5'(1.000;1.000;0.995;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR009115 : Annexin, type VIII
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16.5, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0008798
HIT000196491
(
M81844
)
(Annexin A8; Annexin VIII; Annexin-8; Vascular anticoagulant-beta; VAC-beta;)
genome : 48,255,402 - 48,271,361 (15,960)
query : 1 - 1,856 (1,856/1,856)
12 exons
identity = 0.995
5'(1.000;1.000;0.978;0.991;1.000;0.988;1.000;
1.000;1.000;0.983;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR009115 : Annexin, type VIII
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14.8333, cyto_pero 13.6667,
nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008798)
HIX0020961
HIT000714007 (
ENST00000602274
)
(Conserved hypothetical protein.)
genome : 48,276,679 - 48,279,171 (2,493)
query : 1 - 1,872 (1,872/1,872)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, extr 13, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020961)
HIX0020961
HIT000714673 (
ENST00000602940
)
(Conserved hypothetical protein.)
genome : 48,276,679 - 48,279,171 (2,493)
query : 1 - 1,872 (1,872/1,872)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, extr 13, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020961)
HIX0171196
HIT000552606 (
ENST00000454672
)
(Hypothetical short protein.)
genome : 48,324,788 - 48,332,197 (7,410)
query : 1 - 599 (599/599)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171196)
HIX0171196
HIT000695241 (
ENST00000583360
)
(Hypothetical short protein.)
genome : 48,324,788 - 48,332,197 (7,410)
query : 1 - 599 (599/599)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171196)
HIX0008802
HIT000479067 (
ENST00000395702
)
(Zinc finger protein 488.)
genome : 48,355,024 - 48,373,866 (18,843)
query : 1 - 3,561 (3,561/3,561)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008802)
HIX0008802
HIT000697174 (
ENST00000585316
)
(Zinc finger protein 488.)
genome : 48,355,024 - 48,373,866 (18,843)
query : 1 - 3,561 (3,561/3,561)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008802)
HIX0008802
HIT000531011 (
ENST00000433077
)
(Zinc finger protein 488.)
genome : 48,355,073 - 48,370,846 (15,774)
query : 1 - 538 (538/538)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13, cyto 12.5, cyto_nucl 7.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008802)
HIX0008802
HIT000691451 (
ENST00000579523
)
(Zinc finger protein 488.)
genome : 48,355,073 - 48,370,846 (15,774)
query : 1 - 538 (538/538)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13, cyto 12.5, cyto_nucl 7.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008802)
HIX0008802
HIT000539935 (
ENST00000442001
)
(Zinc finger protein 488.)
genome : 48,355,073 - 48,370,738 (15,666)
query : 1 - 503 (503/503)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, mito 8, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008802)
HIX0008802
HIT000692383 (
ENST00000580468
)
(Zinc finger protein 488.)
genome : 48,355,073 - 48,370,738 (15,666)
query : 1 - 503 (503/503)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, mito 8, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008802)
HIX0008802
HIT000013280
(
AK056666
)
Representative transcript
(Zinc finger protein 488.)
genome : 48,355,075 - 48,373,865 (18,791)
query : 1 - 2,761 (2,761/2,777)
3 exons
identity = 0.999
5'(1.000;1.000;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008802)
HIX0008802
HIT000534784 (
ENST00000436850
)
(Zinc finger protein 488.)
genome : 48,355,075 - 48,370,790 (15,716)
query : 1 - 537 (537/537)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, mito 11, cyto 7.5, cyto_nucl 5.5,
extr_plas 5.5, E.R._mito 5.5, mito_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008802)
HIX0008802
HIT000692330 (
ENST00000580415
)
(Zinc finger protein 488.)
genome : 48,355,075 - 48,370,790 (15,716)
query : 1 - 537 (537/537)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, mito 11, cyto 7.5, cyto_nucl 5.5,
extr_plas 5.5, E.R._mito 5.5, mito_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008802)
HIX0008802
HIT000053624
(
BC051323
)
(Zinc finger protein 488.)
genome : 48,355,089 - 48,373,865 (18,777)
query : 1 - 3,495 (3,495/3,513)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008802)
HIX0008802
HIT000214175 (
NM_153034
)
(Zinc finger protein 488.)
genome : 48,355,089 - 48,373,865 (18,777)
query : 1 - 3,495 (3,495/3,513)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008802)
HIX0008802
HIT000091302
(
BC026895
)
(Zinc finger protein 488.)
genome : 48,355,101 - 48,373,865 (18,765)
query : 1 - 3,377 (3,377/3,405)
3 exons
identity = 0.999
5'(1.000;0.997;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008802)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC055201
Mus
sp. (Mouse) : BC089025
Gallus
sp. (Chicken) : CR385750
Oryzias
sp. (Medaka) : ENSORLT00000010985
Pongo
sp. (Orangutan) : ENSPPYT00000002694
Takifugu
sp. (Fugu) : SINFRUT00000151579
Rattus
sp. (Rat) : XM_001060134
Macaca
sp. (Macaque) : XM_001114284
Monodelphis
sp. (Opossum) : XM_001371805
Equus
sp. (Horse) : XM_001494851
Canis
sp. (Dog) : XM_546200
Bos
sp. (Cow) : XM_602141
Pan
sp. (Chimpanzee) : XR_022795
HIX0008802
HIT000597563 (
ENST00000494156
)
(Zinc finger protein 488.)
genome : 48,355,101 - 48,373,866 (18,766)
query : 1 - 3,378 (3,378/3,378)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008802)
HIX0008802
HIT000694688 (
ENST00000582800
)
(Zinc finger protein 488.)
genome : 48,355,101 - 48,373,866 (18,766)
query : 1 - 3,378 (3,378/3,378)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008802)
HIX0008802
HIT000698383 (
ENST00000586537
)
(Zinc finger protein 488.)
genome : 48,355,101 - 48,373,860 (18,760)
query : 1 - 3,372 (3,372/3,372)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008802)
HIX0008802
HIT000702849 (
ENST00000591025
)
(Zinc finger protein 488.)
genome : 48,355,101 - 48,373,860 (18,760)
query : 1 - 3,372 (3,372/3,372)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008802)
HIX0170867
HIT000529708 (
ENST00000431774
)
(Hypothetical short protein.)
genome : 48,357,926 - 48,358,600 (675)
query : 1 - 227 (227/227)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170867)
HIX0170867
HIT000689923 (
ENST00000577974
)
(Hypothetical short protein.)
genome : 48,357,926 - 48,358,600 (675)
query : 1 - 227 (227/227)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170867)
HIX0008802
HIT000510468 (
ENST00000412534
)
(Zinc finger protein 488.)
genome : 48,359,351 - 48,370,751 (11,401)
query : 1 - 543 (543/543)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, mito 10, nucl 2, cyto 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008802)
HIX0008802
HIT000691826 (
ENST00000579906
)
(Zinc finger protein 488.)
genome : 48,359,351 - 48,370,751 (11,401)
query : 1 - 543 (543/543)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, mito 10, nucl 2, cyto 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008802)
HIX0008802
HIT000542519 (
ENST00000444585
)
(Zinc finger protein 488.)
genome : 48,359,365 - 48,370,921 (11,557)
query : 1 - 580 (580/580)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 14, cyto 12.5, cyto_nucl 7.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008802)
HIX0008802
HIT000692696 (
ENST00000580786
)
(Zinc finger protein 488.)
genome : 48,359,365 - 48,370,921 (11,557)
query : 1 - 580 (580/580)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 14, cyto 12.5, cyto_nucl 7.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008802)
HIX0008802
HIT000523130 (
ENST00000425196
)
(Zinc finger protein 488.)
genome : 48,364,386 - 48,370,890 (6,505)
query : 1 - 982 (982/982)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, mito 13, cyto_nucl 8, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008802)
HIX0008802
HIT000693401 (
ENST00000581498
)
(Zinc finger protein 488.)
genome : 48,364,386 - 48,370,890 (6,505)
query : 1 - 982 (982/982)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, mito 13, cyto_nucl 8, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008802)
HIX0008802
HIT000015964
(
AK091097
)
(Zinc finger protein 488.)
genome : 48,371,330 - 48,373,864 (2,535)
query : 1 - 2,535 (2,535/2,535)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008802)
HIX0035509
HIT000011632
(
AK055018
)
Representative transcript
(Conserved hypothetical protein.)
genome : 48,372,082 - 48,373,864 (1,783)
query : 1 - 1,783 (1,783/1,783)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, extr 11, cyto_nucl 11, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035509)
HIX0025952
HIT000199775 (
NM_002900
)
(Retinol-binding protein 3; Interphotoreceptor retinoid-binding protein; IRBP; Interstitial retinol-binding protein; Precursor;)
genome : 48,381,488 - 48,390,991 (9,504)
query : 1 - 4,275 (4,275/4,289)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025952)
HIX0025952
HIT000052267
(
BC039844
)
(Retinol-binding protein 3; Interphotoreceptor retinoid-binding protein; IRBP; Interstitial retinol-binding protein; Precursor;)
genome : 48,381,488 - 48,390,981 (9,494)
query : 1 - 4,265 (4,265/4,279)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005151 : Tail specific protease
IPR029045 : ClpP/crotonase-like domain
GO :
0006508 : Biological Process : proteolysis
0008236 : Molecular Function : serine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025952)
HIX0025952
HIT000103840 (
ENST00000224600
)
(Retinol-binding protein 3; Interphotoreceptor retinoid-binding protein; IRBP; Interstitial retinol-binding protein; Precursor;)
genome : 48,381,487 - 48,390,991 (9,505)
query : 1 - 4,276 (4,276/4,276)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025952)
HIX0025952
HIT000696567 (
ENST00000584701
)
(Retinol-binding protein 3; Interphotoreceptor retinoid-binding protein; IRBP; Interstitial retinol-binding protein; Precursor;)
genome : 48,381,487 - 48,390,991 (9,505)
query : 1 - 4,276 (4,276/4,276)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025952)
HIX0025952
HIT000194841
(
M22453
)
Representative transcript
(Retinol-binding protein 3; Interphotoreceptor retinoid-binding protein; IRBP; Interstitial retinol-binding protein; Precursor;)
genome : 48,381,489 - 48,390,991 (9,503)
query : 1 - 4,275 (4,275/4,275)
4 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005151 : Tail specific protease
IPR029045 : ClpP/crotonase-like domain
GO :
0006508 : Biological Process : proteolysis
0008236 : Molecular Function : serine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025952)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AY994153
Mus
sp. (Mouse) : BC017610
Equus
sp. (Horse) : ENSECAT00000014572
Pongo
sp. (Orangutan) : ENSPPYT00000002695
Takifugu
sp. (Fugu) : SINFRUT00000149027
Macaca
sp. (Macaque) : XM_001109573
Monodelphis
sp. (Opossum) : XM_001371829
Pan
sp. (Chimpanzee) : XM_507774
Canis
sp. (Dog) : XM_546201
HIX0025952
HIT000563922
(
AB593121
)
(Retinol-binding protein 3; Interphotoreceptor retinoid-binding protein; IRBP; Interstitial retinol-binding protein; Precursor;)
genome : 48,381,505 - 48,390,983 (9,479)
query : 1 - 4,250 (4,250/4,250)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005151 : Tail specific protease
IPR029045 : ClpP/crotonase-like domain
GO :
0006508 : Biological Process : proteolysis
0008236 : Molecular Function : serine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025952)
HIX0025952
HIT000191218
(
J03912
)
(Retinol-binding protein 3; Interphotoreceptor retinoid-binding protein; IRBP; Interstitial retinol-binding protein; Precursor;)
genome : 48,381,522 - 48,390,874 (9,353)
query : 1 - 4,124 (4,124/4,124)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005151 : Tail specific protease
IPR029045 : ClpP/crotonase-like domain
GO :
0006508 : Biological Process : proteolysis
0008236 : Molecular Function : serine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025952)
HIX0218944
HIT000693761 (
ENST00000581861
)
(Non-protein coding transcript.)
genome : 48,387,524 - 48,387,622 (99)
query : 1 - 99 (99/99)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218944)
HIX0218944
HIT000696732 (
ENST00000584869
)
(Non-protein coding transcript.)
genome : 48,387,524 - 48,387,622 (99)
query : 1 - 99 (99/99)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218944)
HIX0025952
HIT000391940
(
DQ426897
)
(Non-protein coding transcript.)
genome : 48,390,848 - 48,390,999 (152)
query : 1 - 152 (152/152)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025952)
HIX0035330
HIT000072970
(
AF188285
)
Representative transcript
(Growth/differentiation factor 2; GDF-2; Bone morphogenetic protein 9; BMP-9; Precursor;)
genome : 48,413,092 - 48,416,853 (3,762)
query : 4 - 1,939 (1,936/1,942)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.997
InterPro :
IPR001111 : Transforming growth factor-beta, N-terminal
IPR001839 : Transforming growth factor-beta, C-terminal
IPR002405 : Inhibin, alpha subunit
IPR015615 : Transforming growth factor-beta-related
IPR017948 : Transforming growth factor beta, conserved site
IPR029034 : Cystine-knot cytokine
GO :
0005576 : Cellular Component : extracellular region
0008083 : Molecular Function : growth factor activity
0040007 : Biological Process : growth
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, plas 5, mito_pero 5, E.R._mito 4.5, mito 3.5,
nucl 3, E.R. 3, pero 3, cyto_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035330)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK147029
Equus
sp. (Horse) : ENSECAT00000013073
Tetraodon
sp. (Tetraodon) : GSTENT00008231001
Gallus
sp. (Chicken) : L12032
Takifugu
sp. (Fugu) : SINFRUT00000149023
Rattus
sp. (Rat) : XM_001060244
Macaca
sp. (Macaque) : XM_001109523
Monodelphis
sp. (Opossum) : XM_001371850
Pan
sp. (Chimpanzee) : XM_507775
Bos
sp. (Cow) : XM_593677
Danio
sp. (Zebrafish) : XM_686651
Canis
sp. (Dog) : XM_848793
HIX0035330
HIT000205951 (
NM_016204
)
(Growth/differentiation factor 2; GDF-2; Bone morphogenetic protein 9; BMP-9; Precursor;)
genome : 48,413,092 - 48,416,853 (3,762)
query : 4 - 1,939 (1,936/1,942)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.997
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, plas 5, mito_pero 5, E.R._mito 4.5, mito 3.5,
nucl 3, E.R. 3, pero 3, cyto_pero 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035330)
HIX0035330
HIT000105972 (
ENST00000249598
)
(Growth/differentiation factor 2; GDF-2; Bone morphogenetic protein 9; BMP-9; Precursor;)
genome : 48,413,092 - 48,416,853 (3,762)
query : 1 - 1,936 (1,936/1,936)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, plas 5, mito_pero 5, E.R._mito 4.5, mito 3.5,
nucl 3, E.R. 3, pero 3, cyto_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035330)
HIX0035330
HIT000693395 (
ENST00000581492
)
(Growth/differentiation factor 2; GDF-2; Bone morphogenetic protein 9; BMP-9; Precursor;)
genome : 48,413,092 - 48,416,853 (3,762)
query : 1 - 1,936 (1,936/1,936)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, plas 5, mito_pero 5, E.R._mito 4.5, mito 3.5,
nucl 3, E.R. 3, pero 3, cyto_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035330)
HIX0035330
HIT000263794
(
BC069643
)
(Growth/differentiation factor 2; GDF-2; Bone morphogenetic protein 9; BMP-9; Precursor;)
genome : 48,413,459 - 48,416,775 (3,317)
query : 1 - 1,491 (1,491/1,491)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001111 : Transforming growth factor-beta, N-terminal
IPR001839 : Transforming growth factor-beta, C-terminal
IPR002405 : Inhibin, alpha subunit
IPR015615 : Transforming growth factor-beta-related
IPR017948 : Transforming growth factor beta, conserved site
IPR029034 : Cystine-knot cytokine
GO :
0005576 : Cellular Component : extracellular region
0008083 : Molecular Function : growth factor activity
0040007 : Biological Process : growth
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, plas 5, mito_pero 5, E.R._mito 4.5, mito 3.5,
nucl 3, E.R. 3, pero 3, cyto_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035330)
HIX0035330
HIT000265428
(
BC074921
)
(Growth/differentiation factor 2; GDF-2; Bone morphogenetic protein 9; BMP-9; Precursor;)
genome : 48,413,528 - 48,416,724 (3,197)
query : 1 - 1,371 (1,371/1,371)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001111 : Transforming growth factor-beta, N-terminal
IPR001839 : Transforming growth factor-beta, C-terminal
IPR002405 : Inhibin, alpha subunit
IPR015615 : Transforming growth factor-beta-related
IPR017948 : Transforming growth factor beta, conserved site
IPR029034 : Cystine-knot cytokine
GO :
0005576 : Cellular Component : extracellular region
0008083 : Molecular Function : growth factor activity
0040007 : Biological Process : growth
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, plas 5, mito_pero 5, E.R._mito 4.5, mito 3.5,
nucl 3, E.R. 3, pero 3, cyto_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035330)
HIX0035330
HIT000433822
(
AK314956
)
(Growth/differentiation factor 2; GDF-2; Bone morphogenetic protein 9; BMP-9; Precursor;)
genome : 48,413,578 - 48,416,872 (3,295)
query : 1 - 1,469 (1,469/1,469)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
InterPro :
IPR001111 : Transforming growth factor-beta, N-terminal
IPR001839 : Transforming growth factor-beta, C-terminal
IPR002405 : Inhibin, alpha subunit
IPR015615 : Transforming growth factor-beta-related
IPR017948 : Transforming growth factor beta, conserved site
IPR029034 : Cystine-knot cytokine
GO :
0005576 : Cellular Component : extracellular region
0008083 : Molecular Function : growth factor activity
0040007 : Biological Process : growth
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, plas 5, mito_pero 5, E.R._mito 4.5, mito 3.5,
nucl 3, E.R. 3, pero 3, cyto_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035330)
HIX0035330
HIT000071984
(
AF156891
)
(Growth/differentiation factor 2; GDF-2; Bone morphogenetic protein 9; BMP-9; Precursor;)
genome : 48,413,578 - 48,413,922 (345)
query : 1 - 345 (345/345)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR001839 : Transforming growth factor-beta, C-terminal
IPR002405 : Inhibin, alpha subunit
IPR015615 : Transforming growth factor-beta-related
IPR017948 : Transforming growth factor beta, conserved site
IPR029034 : Cystine-knot cytokine
GO :
0005576 : Cellular Component : extracellular region
0008083 : Molecular Function : growth factor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 8, extr_plas 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035330)
HIX0008801
HIT000040505
(
BC028237
)
(Bone morphogenetic protein 3B; BMP-3B; Bone-inducing protein; BIP; Growth/differentiation factor 10; GDF-10; Precursor;)
genome : 48,425,789 - 48,439,138 (13,350)
query : 1 - 2,076 (2,076/2,175)
3 exons
identity = 0.998
3'(0.998;1.000;0.993)5'
coverage = 1.000
InterPro :
IPR001839 : Transforming growth factor-beta, C-terminal
IPR002405 : Inhibin, alpha subunit
IPR015615 : Transforming growth factor-beta-related
IPR017948 : Transforming growth factor beta, conserved site
IPR029034 : Cystine-knot cytokine
GO :
0005576 : Cellular Component : extracellular region
0008083 : Molecular Function : growth factor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 14, cyto 12, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008801)
HIX0008801
HIT000201682 (
NM_004962
)
(Bone morphogenetic protein 3B; BMP-3B; Bone-inducing protein; BIP; Growth/differentiation factor 10; GDF-10; Precursor;)
genome : 48,425,789 - 48,439,138 (13,350)
query : 1 - 2,646 (2,646/2,658)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, pero 6, E.R. 4, lyso 3, golg 3, cyto_pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008801)
HIX0008801
HIT000101519
(
D49492
)
Representative transcript
(Bone morphogenetic protein 3B; BMP-3B; Bone-inducing protein; BIP; Growth/differentiation factor 10; GDF-10; Precursor;)
genome : 48,425,815 - 48,438,976 (13,162)
query : 1 - 2,458 (2,458/2,458)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001111 : Transforming growth factor-beta, N-terminal
IPR001839 : Transforming growth factor-beta, C-terminal
IPR015615 : Transforming growth factor-beta-related
IPR017948 : Transforming growth factor beta, conserved site
IPR029034 : Cystine-knot cytokine
GO :
0008083 : Molecular Function : growth factor activity
0040007 : Biological Process : growth
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, pero 6, E.R. 4, lyso 3, golg 3, cyto_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008801)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK042684
Bos
sp. (Cow) : BC123524
Rattus
sp. (Rat) : D49494
Macaca
sp. (Macaque) : ENSMMUT00000016687
Oryzias
sp. (Medaka) : ENSORLT00000022257
Pongo
sp. (Orangutan) : ENSPPYT00000002697
Pan
sp. (Chimpanzee) : ENSPTRT00000043773
Tetraodon
sp. (Tetraodon) : GSTENT00008232001
Takifugu
sp. (Fugu) : SINFRUT00000149019
Takifugu
sp. (Fugu) : SINFRUT00000151580
Monodelphis
sp. (Opossum) : XM_001371873
Equus
sp. (Horse) : XM_001494773
Gallus
sp. (Chicken) : XM_421648
Danio
sp. (Zebrafish) : XM_686367
Canis
sp. (Dog) : XM_848811
HIX0008801
HIT000103841 (
ENST00000224605
)
(Bone morphogenetic protein 3B; BMP-3B; Bone-inducing protein; BIP; Growth/differentiation factor 10; GDF-10; Precursor;)
genome : 48,425,815 - 48,438,976 (13,162)
query : 1 - 2,458 (2,458/2,458)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, pero 6, E.R. 4, lyso 3, golg 3, cyto_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008801)
HIX0008801
HIT000692196 (
ENST00000580279
)
(Bone morphogenetic protein 3B; BMP-3B; Bone-inducing protein; BIP; Growth/differentiation factor 10; GDF-10; Precursor;)
genome : 48,425,815 - 48,438,976 (13,162)
query : 1 - 2,458 (2,458/2,458)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, pero 6, E.R. 4, lyso 3, golg 3, cyto_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008801)
HIX0008801
HIT000434188
(
AK315322
)
(Bone morphogenetic protein 3B; BMP-3B; Bone-inducing protein; BIP; Growth/differentiation factor 10; GDF-10; Precursor;)
genome : 48,426,570 - 48,438,994 (12,425)
query : 1 - 1,718 (1,718/1,718)
3 exons
identity = 0.998
3'(1.000;0.999;0.997)5'
coverage = 1.000
InterPro :
IPR001839 : Transforming growth factor-beta, C-terminal
IPR015615 : Transforming growth factor-beta-related
IPR017948 : Transforming growth factor beta, conserved site
IPR029034 : Cystine-knot cytokine
GO :
0008083 : Molecular Function : growth factor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, pero 6, E.R. 4, lyso 3, golg 3, cyto_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008801)
HIX0008801
HIT000193799
(
L42113
)
(Bone morphogenetic protein 3B; BMP-3B; Bone-inducing protein; BIP; Growth/differentiation factor 10; GDF-10; Precursor;)
genome : 48,426,570 - 48,428,808 (2,239)
query : 1 - 360 (360/360)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001839 : Transforming growth factor-beta, C-terminal
IPR002405 : Inhibin, alpha subunit
IPR015615 : Transforming growth factor-beta-related
IPR017948 : Transforming growth factor beta, conserved site
IPR029034 : Cystine-knot cytokine
GO :
0005576 : Cellular Component : extracellular region
0008083 : Molecular Function : growth factor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 6, nucl 3.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008801)
HIX0008801
HIT000429226
(
AK310360
)
(Bone morphogenetic protein 3B; BMP-3B; Bone-inducing protein; BIP; Growth/differentiation factor 10; GDF-10; Precursor;)
genome : 48,428,084 - 48,438,995 (10,912)
query : 1 - 2,087 (2,087/2,087)
2 exons
identity = 0.997
3'(0.998;0.995)5'
coverage = 1.000
InterPro :
IPR001111 : Transforming growth factor-beta, N-terminal
IPR001839 : Transforming growth factor-beta, C-terminal
IPR015615 : Transforming growth factor-beta-related
IPR017948 : Transforming growth factor beta, conserved site
IPR029034 : Cystine-knot cytokine
GO :
0008083 : Molecular Function : growth factor activity
0040007 : Biological Process : growth
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, pero 5, lyso 4, golg 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008801)
HIX0017425
HIT000003323
(
AK000848
)
Representative transcript
(Conserved hypothetical protein.)
genome : 48,571,841 - 48,573,537 (1,697)
query : 1 - 1,702 (1,702/1,702)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, nucl 2.5, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017425)
HIX0026109
HIT000355517 (
ENST00000374237
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 5.)
genome : 48,736,874 - 48,798,780 (61,907)
query : 1 - 3,125 (3,125/3,125)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 12.5, nucl 3.5, mito 3, plas 2,
E.R._mito 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000689843 (
ENST00000577893
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 5.)
genome : 48,736,874 - 48,798,780 (61,907)
query : 1 - 3,125 (3,125/3,125)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 12.5, nucl 3.5, mito 3, plas 2,
E.R._mito 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000057560_03
(
BX648913
)
(Tyrosine-protein phosphatase non-receptor type 20; hPTPN20; EC=3.1.3.48;)
genome : 48,737,042 - 48,827,966 (90,925)
query : 2 - 1,928 (1,927/1,948)
4 exons
identity = 0.998
3'(0.999;1.000;1.000;0.991)5'
coverage = 0.999
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000051737_04
(
BC036539
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 2.)
genome : 48,737,042 - 48,827,923 (90,882)
query : 1 - 2,478 (2,478/2,494)
9 exons
identity = 0.998
3'(1.000;1.000;0.989;0.980;1.000;1.000;1.000;
1.000;0.984)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 14.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000306849_04
(
CR933668
)
(Tyrosine-protein phosphatase non-receptor type 20; hPTPN20; EC=3.1.3.48;)
genome : 48,737,044 - 48,827,934 (90,891)
query : 1 - 1,991 (1,991/2,008)
5 exons
identity = 0.999
3'(0.999;1.000;0.991;1.000;1.000)5'
coverage = 0.998
EC number :
EC 3.1.3.48
InterPro :
IPR000242 : Protein-tyrosine phosphatase, receptor/non-receptor type
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 10.5, cyto_nucl 6.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000023936_04
(
AL050040
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 5.)
genome : 48,737,044 - 48,827,924 (90,881)
query : 1 - 2,776 (2,776/2,786)
9 exons
identity = 0.997
3'(0.998;1.000;0.995;0.997;0.978;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
InterPro :
IPR000242 : Protein-tyrosine phosphatase, receptor/non-receptor type
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR016130 : Protein-tyrosine phosphatase, active site
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, plas 3, mito 2.5, E.R._mito 2.5, nucl 2,
extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000604925 (
ENST00000504747
)
(Tyrosine-protein phosphatase non-receptor type 20; hPTPN20; EC=3.1.3.48;)
genome : 48,737,040 - 48,827,966 (90,927)
query : 1 - 1,929 (1,929/1,929)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000695512 (
ENST00000583632
)
(Tyrosine-protein phosphatase non-receptor type 20; hPTPN20; EC=3.1.3.48;)
genome : 48,737,040 - 48,827,966 (90,927)
query : 1 - 1,929 (1,929/1,929)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000127355 (
ENST00000331650
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 8.)
genome : 48,737,040 - 48,827,934 (90,895)
query : 1 - 2,789 (2,789/2,789)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 7, plas 3, mito_pero 3, mito 2.5,
pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000609404 (
ENST00000509544
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 10.)
genome : 48,737,040 - 48,827,934 (90,895)
query : 1 - 1,995 (1,995/1,995)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000696713 (
ENST00000584849
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 8.)
genome : 48,737,040 - 48,827,934 (90,895)
query : 1 - 2,789 (2,789/2,789)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 7, plas 3, mito_pero 3, mito 2.5,
pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000696784 (
ENST00000584922
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 10.)
genome : 48,737,040 - 48,827,934 (90,895)
query : 1 - 1,995 (1,995/1,995)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000355520 (
ENST00000374240
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 2.)
genome : 48,737,042 - 48,827,927 (90,886)
query : 1 - 2,481 (2,481/2,481)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 14.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000694954 (
ENST00000583073
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 2.)
genome : 48,737,042 - 48,827,927 (90,886)
query : 1 - 2,481 (2,481/2,481)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 14.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000205566 (
NM_015605
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 2.)
genome : 48,737,042 - 48,827,924 (90,883)
query : 1 - 2,478 (2,478/2,478)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 14.5, cyto 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000397461 (
NM_001042363
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 8.)
genome : 48,737,042 - 48,827,924 (90,883)
query : 1 - 2,872 (2,872/2,872)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 7, plas 3, mito_pero 3, mito 2.5,
pero 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000397462 (
NM_001042364
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 9.)
genome : 48,737,042 - 48,827,924 (90,883)
query : 1 - 2,226 (2,226/2,226)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 15, cyto 6, mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000397463 (
NM_001042365
)
(Tyrosine-protein phosphatase non-receptor type 20; hPTPN20; EC=3.1.3.48;)
genome : 48,737,042 - 48,827,924 (90,883)
query : 1 - 1,885 (1,885/1,885)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000479029 (
ENST00000395662
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 9.)
genome : 48,737,042 - 48,827,924 (90,883)
query : 1 - 2,226 (2,226/2,226)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 15, cyto 6, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000479035 (
ENST00000395668
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 8.)
genome : 48,737,042 - 48,827,924 (90,883)
query : 1 - 2,872 (2,872/2,872)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 7, plas 3, mito_pero 3, mito 2.5,
pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000693256 (
ENST00000581350
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 9.)
genome : 48,737,042 - 48,827,924 (90,883)
query : 1 - 2,226 (2,226/2,226)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 15, cyto 6, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000695956 (
ENST00000584081
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 8.)
genome : 48,737,042 - 48,827,924 (90,883)
query : 1 - 2,872 (2,872/2,872)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 7, plas 3, mito_pero 3, mito 2.5,
pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000397456 (
NM_001042358
)
(Tyrosine-protein phosphatase non-receptor type 20; hPTPN20; EC=3.1.3.48;)
genome : 48,737,042 - 48,827,581 (90,540)
query : 1 - 2,870 (2,870/2,870)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8, mito_pero 8, mito 7, pero 7, plas 4, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000397457 (
NM_001042359
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 4.)
genome : 48,737,042 - 48,827,581 (90,540)
query : 1 - 2,444 (2,444/2,444)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 7, cyto 7, cyto_nucl 7, plas 5.5, cyto_mito 5.5,
mito_nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000397458 (
NM_001042360
)
(Tyrosine-protein phosphatase non-receptor type 20; hPTPN20; EC=3.1.3.48;)
genome : 48,737,042 - 48,827,581 (90,540)
query : 1 - 2,321 (2,321/2,321)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000397459 (
NM_001042361
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 6.)
genome : 48,737,042 - 48,827,581 (90,540)
query : 1 - 2,319 (2,319/2,319)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000397460 (
NM_001042362
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 7.)
genome : 48,737,042 - 48,827,581 (90,540)
query : 1 - 2,076 (2,076/2,076)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 15.5, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000355515_03 (
ENST00000374235
)
(Tyrosine-protein phosphatase non-receptor type 20; hPTPN20; EC=3.1.3.48;)
genome : 48,737,042 - 48,806,985 (69,944)
query : 1 - 2,539 (2,539/2,539)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, nucl 8, plas 6.5, pero 6, cyto_mito 6,
extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000397455 (
NM_001042357
)
(Tyrosine-protein phosphatase non-receptor type 20; hPTPN20; EC=3.1.3.48;)
genome : 48,737,042 - 48,806,985 (69,944)
query : 1 - 2,965 (2,965/2,965)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 8, pero 5.5, mito_pero 4, plas 3.5,
extr_plas 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000479027 (
ENST00000395660
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 8.)
genome : 48,737,042 - 48,806,985 (69,944)
query : 1 - 2,870 (2,870/2,870)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, mito 6.5, mito_pero 5.5, nucl 5, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000479028 (
ENST00000395661
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 9.)
genome : 48,737,042 - 48,806,985 (69,944)
query : 1 - 2,323 (2,323/2,323)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 9, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000690025 (
ENST00000578079
)
(Tyrosine-protein phosphatase non-receptor type 20; hPTPN20; EC=3.1.3.48;)
genome : 48,737,042 - 48,806,985 (69,944)
query : 1 - 2,539 (2,539/2,539)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, nucl 8, plas 6.5, pero 6, cyto_mito 6,
extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000692770 (
ENST00000580860
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 9.)
genome : 48,737,042 - 48,806,985 (69,944)
query : 1 - 2,323 (2,323/2,323)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 9, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000695614 (
ENST00000583736
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 8.)
genome : 48,737,042 - 48,806,985 (69,944)
query : 1 - 2,870 (2,870/2,870)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, mito 6.5, mito_pero 5.5, nucl 5, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000501850_02
(
BC143394
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 10.)
genome : 48,738,566 - 48,806,945 (68,380)
query : 1 - 607 (607/607)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 15, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000332195_04
(
AY704142
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 4.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 913 (913/913)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
InterPro :
IPR000242 : Protein-tyrosine phosphatase, receptor/non-receptor type
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR016130 : Protein-tyrosine phosphatase, active site
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 7, cyto 7, cyto_nucl 7, plas 5.5, cyto_mito 5.5,
mito_nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000332196_04
(
AY704143
)
(Tyrosine-protein phosphatase non-receptor type 20; hPTPN20; EC=3.1.3.48;)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 790 (790/790)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
InterPro :
IPR000242 : Protein-tyrosine phosphatase, receptor/non-receptor type
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR016130 : Protein-tyrosine phosphatase, active site
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000332198_04
(
AY704145
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 7.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 545 (545/545)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 15.5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000332201_04
(
AY704148
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 9.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 854 (854/854)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
InterPro :
IPR000242 : Protein-tyrosine phosphatase, receptor/non-receptor type
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 9, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000332203_04
(
AY704150
)
Representative transcript
(Tyrosine-protein phosphatase non-receptor type 20 isoform 8.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 1,401 (1,401/1,401)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.989;1.000;1.000;
1.000;0.994;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
InterPro :
IPR000242 : Protein-tyrosine phosphatase, receptor/non-receptor type
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR016130 : Protein-tyrosine phosphatase, active site
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, mito 6.5, mito_pero 5.5, nucl 5, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168280
Mus
sp. (Mouse) : AK017003
Rattus
sp. (Rat) : BC129117
Bos
sp. (Cow) : ENSBTAT00000019887
Pongo
sp. (Orangutan) : ENSPPYT00000002699
Pan
sp. (Chimpanzee) : XM_001136909
Monodelphis
sp. (Opossum) : XM_001371949
Equus
sp. (Horse) : XM_001494649
Canis
sp. (Dog) : XM_543895
HIX0026109
HIT000332206_04
(
AY704153
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 4.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 818 (818/818)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
InterPro :
IPR000242 : Protein-tyrosine phosphatase, receptor/non-receptor type
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR003595 : Protein-tyrosine phosphatase, catalytic
IPR016130 : Protein-tyrosine phosphatase, active site
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, nucl 8, cyto_mito 7, pero 4, mito 3.5,
plas 3, extr 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000332209_04
(
AY704156
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 10.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 586 (586/586)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000332210_04
(
AY704157
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 10.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 450 (450/450)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000332211_04
(
AY704158
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 5.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 1,153 (1,153/1,153)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
InterPro :
IPR000242 : Protein-tyrosine phosphatase, receptor/non-receptor type
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR016130 : Protein-tyrosine phosphatase, active site
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, mito 5, mito_pero 4.5, plas 2, nucl 2,
pero 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000479041_01 (
ENST00000395674
)
(Tyrosine-protein phosphatase non-receptor type 20; hPTPN20; EC=3.1.3.48;)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 790 (790/790)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000479092_02 (
ENST00000395727
)
(Tyrosine-protein phosphatase non-receptor type 20; hPTPN20; EC=3.1.3.48;)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 790 (790/790)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000602631 (
ENST00000502266
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 9.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 693 (693/693)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 15, cyto 6, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000603039_02 (
ENST00000502705
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 9.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 854 (854/854)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 9, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000604115_02 (
ENST00000503851
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 7.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 545 (545/545)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 15.5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000605825_02 (
ENST00000505714
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 10.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 586 (586/586)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000607326_02 (
ENST00000507329
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 10.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 450 (450/450)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000608627_02 (
ENST00000508715
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 10.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 586 (586/586)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000609107 (
ENST00000509230
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 6.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 788 (788/788)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000609486 (
ENST00000509631
)
(Tyrosine-protein phosphatase non-receptor type 20; hPTPN20; EC=3.1.3.48;)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 1,244 (1,244/1,244)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 7, plas 3, mito_pero 3, mito 2.5,
pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000609601 (
ENST00000509753
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 8.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 1,401 (1,401/1,401)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, mito 6.5, mito_pero 5.5, nucl 5, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000610139_02 (
ENST00000510335
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 5.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 1,153 (1,153/1,153)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, mito 5, mito_pero 4.5, plas 2, nucl 2,
pero 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000610593_02 (
ENST00000510840
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 9.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 854 (854/854)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 9, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000611109_02 (
ENST00000511387
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 7.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 545 (545/545)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 15.5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000612541_02 (
ENST00000512924
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 4.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 818 (818/818)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, nucl 8, cyto_mito 7, pero 4, mito 3.5,
plas 3, extr 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000612751_02 (
ENST00000513156
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 4.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 913 (913/913)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 7, cyto 7, cyto_nucl 7, plas 5.5, cyto_mito 5.5,
mito_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000612754_02 (
ENST00000513159
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 10.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 450 (450/450)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000612851_02 (
ENST00000513266
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 4.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 818 (818/818)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, nucl 8, cyto_mito 7, pero 4, mito 3.5,
plas 3, extr 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000613468_02 (
ENST00000513933
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 5.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 1,153 (1,153/1,153)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, mito 5, mito_pero 4.5, plas 2, nucl 2,
pero 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000613983 (
ENST00000514491
)
(Tyrosine-protein phosphatase non-receptor type 20; hPTPN20; EC=3.1.3.48;)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 1,339 (1,339/1,339)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8, mito_pero 8, mito 7, pero 7, plas 4, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000614077_02 (
ENST00000514592
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 4.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 913 (913/913)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 7, cyto 7, cyto_nucl 7, plas 5.5, cyto_mito 5.5,
mito_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000614955 (
ENST00000515532
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 2.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 945 (945/945)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 14.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000689445 (
ENST00000577492
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 8.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 1,401 (1,401/1,401)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, mito 6.5, mito_pero 5.5, nucl 5, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000690003 (
ENST00000578057
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 6.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 788 (788/788)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000690475_02 (
ENST00000578533
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 9.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 854 (854/854)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 9, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000690707_02 (
ENST00000578769
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 4.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 913 (913/913)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 7, cyto 7, cyto_nucl 7, plas 5.5, cyto_mito 5.5,
mito_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000691147_02 (
ENST00000579217
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 10.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 450 (450/450)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000691260 (
ENST00000579331
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 2.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 945 (945/945)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 14.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000693410 (
ENST00000581507
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 9.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 693 (693/693)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 15, cyto 6, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000693943_02 (
ENST00000582045
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 7.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 545 (545/545)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 15.5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000693966_02 (
ENST00000582068
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 10.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 586 (586/586)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000694206 (
ENST00000582312
)
(Tyrosine-protein phosphatase non-receptor type 20; hPTPN20; EC=3.1.3.48;)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 1,339 (1,339/1,339)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8, mito_pero 8, mito 7, pero 7, plas 4, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000694241_02 (
ENST00000582347
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 5.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 1,153 (1,153/1,153)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, mito 5, mito_pero 4.5, plas 2, nucl 2,
pero 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000695558_02 (
ENST00000583680
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 4.)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 818 (818/818)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, nucl 8, cyto_mito 7, pero 4, mito 3.5,
plas 3, extr 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000695601 (
ENST00000583723
)
(Tyrosine-protein phosphatase non-receptor type 20; hPTPN20; EC=3.1.3.48;)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 1,244 (1,244/1,244)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 7, plas 3, mito_pero 3, mito 2.5,
pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000696687_02 (
ENST00000584823
)
(Tyrosine-protein phosphatase non-receptor type 20; hPTPN20; EC=3.1.3.48;)
genome : 48,738,573 - 48,827,581 (89,009)
query : 1 - 790 (790/790)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000332199_04
(
AY704146
)
(Tyrosine-protein phosphatase non-receptor type 20; hPTPN20; EC=3.1.3.48;)
genome : 48,738,573 - 48,806,939 (68,367)
query : 1 - 1,388 (1,388/1,388)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.989;1.000;1.000;
1.000;1.000;0.991)5'
coverage = 1.000
EC number :
EC 3.1.3.48
InterPro :
IPR000242 : Protein-tyrosine phosphatase, receptor/non-receptor type
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR016130 : Protein-tyrosine phosphatase, active site
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 8, pero 5.5, mito_pero 4, plas 3.5,
extr_plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000332202_04
(
AY704149
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 10.)
genome : 48,738,573 - 48,806,939 (68,367)
query : 1 - 594 (594/594)
6 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;0.991)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 15, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000332208_04
(
AY704155
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 10.)
genome : 48,738,573 - 48,806,939 (68,367)
query : 1 - 635 (635/635)
6 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;0.991)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000355513 (
ENST00000374233
)
(Tyrosine-protein phosphatase non-receptor type 20; hPTPN20; EC=3.1.3.48;)
genome : 48,738,573 - 48,806,939 (68,367)
query : 1 - 1,388 (1,388/1,388)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 8, pero 5.5, mito_pero 4, plas 3.5,
extr_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000607413 (
ENST00000507417
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 9.)
genome : 48,738,573 - 48,806,939 (68,367)
query : 1 - 742 (742/742)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 17.5, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000692031 (
ENST00000580111
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 9.)
genome : 48,738,573 - 48,806,939 (68,367)
query : 1 - 742 (742/742)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 17.5, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000695178 (
ENST00000583297
)
(Tyrosine-protein phosphatase non-receptor type 20; hPTPN20; EC=3.1.3.48;)
genome : 48,738,573 - 48,806,939 (68,367)
query : 1 - 1,388 (1,388/1,388)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 8, pero 5.5, mito_pero 4, plas 3.5,
extr_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000503456_02
(
BC171725
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 10.)
genome : 48,738,574 - 48,806,945 (68,372)
query : 1 - 599 (599/599)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 15, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000602621_02 (
ENST00000502254
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 10.)
genome : 48,738,574 - 48,806,945 (68,372)
query : 1 - 599 (599/599)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 15, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000603397_02 (
ENST00000503086
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 10.)
genome : 48,738,574 - 48,806,945 (68,372)
query : 1 - 640 (640/640)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000611989_02 (
ENST00000512321
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 10.)
genome : 48,738,574 - 48,806,945 (68,372)
query : 1 - 599 (599/599)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 15, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000613304_02 (
ENST00000513756
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 10.)
genome : 48,738,574 - 48,806,945 (68,372)
query : 1 - 640 (640/640)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000689569_02 (
ENST00000577619
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 10.)
genome : 48,738,574 - 48,806,945 (68,372)
query : 1 - 640 (640/640)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000693166_02 (
ENST00000581259
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 10.)
genome : 48,738,574 - 48,806,945 (68,372)
query : 1 - 599 (599/599)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 15, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000515848 (
ENST00000417914
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 9.)
genome : 48,739,412 - 48,827,934 (88,523)
query : 1 - 567 (567/567)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 5.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000697033 (
ENST00000585175
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 9.)
genome : 48,739,412 - 48,827,934 (88,523)
query : 1 - 567 (567/567)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 5.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000607676 (
ENST00000507697
)
(Tyrosine-protein phosphatase non-receptor type 20; hPTPN20; EC=3.1.3.48;)
genome : 48,757,708 - 48,818,461 (60,754)
query : 1 - 1,213 (1,213/1,213)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10.5, cysk 8, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000693491 (
ENST00000581588
)
(Tyrosine-protein phosphatase non-receptor type 20; hPTPN20; EC=3.1.3.48;)
genome : 48,757,708 - 48,818,461 (60,754)
query : 1 - 1,213 (1,213/1,213)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10.5, cysk 8, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000571540_02 (
ENST00000466912
)
(Tyrosine-protein phosphatase non-receptor type 20 isoform 9.)
genome : 48,792,520 - 48,806,896 (14,377)
query : 1 - 446 (446/446)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 16.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0026109
HIT000332248_04
(
AY753191
)
(Tyrosine-protein phosphatase non-receptor type 20; hPTPN20; EC=3.1.3.48;)
genome : 48,792,727 - 48,827,640 (34,914)
query : 1 - 387 (387/387)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026109)
HIX0035410
HIT000529637 (
ENST00000431703
)
(FERM and PDZ domain-containing protein 2 isoform 4.)
genome : 48,844,036 - 48,862,688 (18,653)
query : 1 - 1,947 (1,947/1,947)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8, cyto 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035410)
HIX0035410
HIT000658683 (
NR_033172
)
(FERM and PDZ domain-containing protein 2 isoform 4.)
genome : 48,844,036 - 48,862,688 (18,653)
query : 1 - 1,947 (1,947/1,947)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8, cyto 4, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035410)
HIX0035410
HIT000690709 (
ENST00000578771
)
(FERM and PDZ domain-containing protein 2 isoform 4.)
genome : 48,844,036 - 48,862,688 (18,653)
query : 1 - 1,947 (1,947/1,947)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8, cyto 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035410)
HIX0035410
HIT000264463_04
(
BC071635
)
Representative transcript
(FERM and PDZ domain-containing protein 2 isoform 4.)
genome : 48,844,242 - 48,862,600 (18,359)
query : 1 - 1,653 (1,653/1,727)
6 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035410)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : ENSBTAT00000031283
Pongo
sp. (Orangutan) : ENSPPYT00000002702
Pan
sp. (Chimpanzee) : XM_001135868
Equus
sp. (Horse) : XM_001500557
Macaca
sp. (Macaque) : XR_013629
HIX0035410
HIT000264840
(
BC072395
)
(FERM and PDZ domain-containing protein 2 isoform 4.)
genome : 48,844,249 - 48,862,603 (18,355)
query : 12 - 1,660 (1,649/1,740)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.993
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035410)
HIX0035410
HIT000489274
(
AK294650
)
(FERM and PDZ domain-containing protein 2 isoform 4.)
genome : 48,844,550 - 48,862,643 (18,094)
query : 1 - 1,388 (1,388/1,388)
6 exons
identity = 0.999
3'(0.997;0.997;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035410)
HIX0035410
HIT000499584
(
AK315971
)
(FERM and PDZ domain-containing protein 2 isoform 4.)
genome : 48,844,575 - 48,862,688 (18,114)
query : 1 - 1,408 (1,408/1,408)
6 exons
identity = 0.999
3'(0.996;1.000;1.000;1.000;0.993;1.000)5'
coverage = 1.000
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035410)
HIX0035410
HIT000501336
(
BC137434
)
(FERM and PDZ domain-containing protein 2 isoform 4.)
genome : 48,844,661 - 48,862,575 (17,915)
query : 1 - 1,209 (1,209/1,209)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035410)
HIX0035410
HIT000501342
(
BC137440
)
(FERM and PDZ domain-containing protein 2 isoform 4.)
genome : 48,844,661 - 48,862,575 (17,915)
query : 1 - 1,209 (1,209/1,209)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035410)
HIX0035410
HIT000503037_01
(
BC144636
)
(FERM and PDZ domain-containing protein 2 isoform 4.)
genome : 48,844,661 - 48,862,575 (17,915)
query : 1 - 1,209 (1,209/1,209)
6 exons
identity = 0.998
3'(1.000;0.997;0.990;1.000;0.993;1.000)5'
coverage = 1.000
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 9, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035410)
HIX0035410
HIT000501341
(
BC137439
)
(FERM and PDZ domain-containing protein 2 isoform 4.)
genome : 48,844,662 - 48,862,572 (17,911)
query : 2 - 1,206 (1,205/1,206)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035410)
HIX0035410
HIT000501333
(
BC137431
)
(FERM and PDZ domain-containing protein 2 isoform 4.)
genome : 48,844,666 - 48,862,575 (17,910)
query : 1 - 1,204 (1,204/1,204)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035410)
HIX0035410
HIT000528293 (
ENST00000430359
)
(FERM and PDZ domain-containing protein 2 isoform 3.)
genome : 48,844,800 - 48,868,504 (23,705)
query : 1 - 1,347 (1,347/1,347)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, nucl 11, cyto 10, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035410)
HIX0035410
HIT000694542 (
ENST00000582652
)
(FERM and PDZ domain-containing protein 2 isoform 3.)
genome : 48,844,800 - 48,868,504 (23,705)
query : 1 - 1,347 (1,347/1,347)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, nucl 11, cyto 10, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035410)
HIX0035410
HIT000432525
(
AK313659
)
(FERM and PDZ domain-containing protein 2 isoform 4.)
genome : 48,844,800 - 48,862,645 (17,846)
query : 1 - 1,140 (1,140/1,140)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.996)5'
coverage = 1.000
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035410)
HIX0021743
HIT000523121 (
ENST00000425187
)
(Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 8; AGAP-8; Centaurin-gamma-like family member 5;)
genome : 48,901,102 - 48,922,972 (21,871)
query : 1 - 2,431 (2,431/2,431)
7 exons
identity = 0.998
3'(1.000;1.000;1.000;0.962;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14, cyto 6.5, extr 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021743)
HIX0021743
HIT000693098 (
ENST00000581191
)
(Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 8; AGAP-8; Centaurin-gamma-like family member 5;)
genome : 48,901,102 - 48,922,972 (21,871)
query : 1 - 2,431 (2,431/2,431)
7 exons
identity = 0.998
3'(1.000;1.000;1.000;0.962;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14, cyto 6.5, extr 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021743)
HIX0021743
HIT000543368 (
ENST00000445434
)
(Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 8; AGAP-8; Centaurin-gamma-like family member 5;)
genome : 48,901,194 - 48,922,958 (21,765)
query : 1 - 2,387 (2,387/2,387)
8 exons
identity = 0.995
3'(0.996;1.000;1.000;0.962;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14, cyto 6.5, extr 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021743)
HIX0021743
HIT000690287 (
ENST00000578343
)
(Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 8; AGAP-8; Centaurin-gamma-like family member 5;)
genome : 48,901,194 - 48,922,958 (21,765)
query : 1 - 2,387 (2,387/2,387)
8 exons
identity = 0.995
3'(0.996;1.000;1.000;0.962;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14, cyto 6.5, extr 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021743)
HIX0209341
HIT000465122_08
(
DQ598591
)
Representative transcript
(Non-protein coding transcript.)
genome : 48,902,199 - 48,902,228 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209341)
HIX0209341
HIT000454754_08
(
DQ588223
)
(Non-protein coding transcript.)
genome : 48,902,200 - 48,902,228 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209341)
HIX0021743
HIT000534114 (
ENST00000436180
)
(Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 8; AGAP-8; Centaurin-gamma-like family member 5;)
genome : 48,903,540 - 48,942,646 (39,107)
query : 1 - 759 (759/759)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12, extr 10, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021743)
HIX0021743
HIT000696896 (
ENST00000585036
)
(Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 8; AGAP-8; Centaurin-gamma-like family member 5;)
genome : 48,903,540 - 48,942,646 (39,107)
query : 1 - 759 (759/759)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12, extr 10, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021743)
HIX0021743
HIT000609774 (
ENST00000509944
)
(Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 8; AGAP-8; Centaurin-gamma-like family member 5;)
genome : 48,906,886 - 48,922,780 (15,895)
query : 1 - 366 (366/378)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.968
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 3.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021743)
HIX0021743
HIT000689850 (
ENST00000577900
)
(Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 8; AGAP-8; Centaurin-gamma-like family member 5;)
genome : 48,906,886 - 48,922,780 (15,895)
query : 1 - 366 (366/378)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.968
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 3.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021743)
HIX0021743
HIT000090921_04
(
BC024278
)
(Ribosome biogenesis protein BMS1 homolog; Ribosome assembly protein BMS1 homolog;)
genome : 48,927,375 - 48,950,972 (23,598)
query : 10 - 4,077 (4,068/4,095)
8 exons
identity = 0.996
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, extr 5, cyto_nucl 4, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021743)
HIX0021743
HIT000089203_04
(
BC017177
)
(Ribosome biogenesis protein BMS1 homolog; Ribosome assembly protein BMS1 homolog;)
genome : 48,927,375 - 48,950,972 (23,598)
query : 10 - 4,077 (4,068/4,094)
8 exons
identity = 0.996
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, extr 5, cyto_nucl 4, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021743)
HIX0021743
HIT000486350_03 (
NR_003611
)
(Ribosome biogenesis protein BMS1 homolog; Ribosome assembly protein BMS1 homolog;)
genome : 48,927,373 - 48,952,629 (25,257)
query : 1 - 4,235 (4,235/4,235)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, extr 5, cyto_nucl 4, cyto 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021743)
HIX0021743
HIT000547734 (
ENST00000449800
)
(Ribosome biogenesis protein BMS1 homolog; Ribosome assembly protein BMS1 homolog;)
genome : 48,927,373 - 48,950,972 (23,600)
query : 1 - 4,074 (4,074/4,074)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, extr 5, cyto_nucl 4, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021743)
HIX0021743
HIT000692014 (
ENST00000580094
)
(Ribosome biogenesis protein BMS1 homolog; Ribosome assembly protein BMS1 homolog;)
genome : 48,927,373 - 48,950,972 (23,600)
query : 1 - 4,074 (4,074/4,074)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, extr 5, cyto_nucl 4, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021743)
HIX0021743
HIT000307047
(
CR936774
)
(Conserved hypothetical protein.)
genome : 48,927,432 - 48,932,900 (5,469)
query : 1 - 5,461 (5,461/5,477)
1 exon
identity = 0.992
3'(0.992)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, plas 2, mito 1.5, mito_pero 1.5,
cyto_plas 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021743)
HIX0021743
HIT000426199
(
AK307333
)
(Ribosome biogenesis protein BMS1 homolog; Ribosome assembly protein BMS1 homolog;)
genome : 48,929,735 - 48,950,972 (21,238)
query : 21 - 1,731 (1,711/1,731)
8 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;0.995;1.000;0.995;
1.000)5'
coverage = 0.988
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, extr 6, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021743)
HIX0170343
HIT000508190_02 (
ENST00000410176
)
(Non-protein coding transcript.)
genome : 48,931,789 - 48,931,904 (116)
query : 1 - 116 (116/116)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170343)
HIX0170343
HIT000508475_02 (
ENST00000410474
)
(Non-protein coding transcript.)
genome : 48,931,789 - 48,931,904 (116)
query : 1 - 116 (116/116)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170343)
HIX0170343
HIT000509231_02 (
ENST00000411290
)
(Non-protein coding transcript.)
genome : 48,931,789 - 48,931,904 (116)
query : 1 - 116 (116/116)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170343)
HIX0170343
HIT000692201_02 (
ENST00000580284
)
(Non-protein coding transcript.)
genome : 48,931,789 - 48,931,904 (116)
query : 1 - 116 (116/116)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170343)
HIX0021743
HIT000026981
(
AL832069
)
Representative transcript
(Ribosome biogenesis protein BMS1 homolog; Ribosome assembly protein BMS1 homolog;)
genome : 48,933,996 - 48,952,513 (18,518)
query : 4 - 7,993 (7,990/8,012)
9 exons
identity = 0.996
3'(0.997;0.994;1.000;1.000;1.000;1.000;0.995;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, extr 5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021743)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC057054
Danio
sp. (Zebrafish) : BC155771
Rattus
sp. (Rat) : XM_001057343
Canis
sp. (Dog) : XM_852256
HIX0021743
HIT000452015_09
(
DQ585484
)
(Non-protein coding transcript.)
genome : 48,935,924 - 48,935,953 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021743)
HIX0021743
HIT000390531
(
BC131568
)
(Ribosome biogenesis protein BMS1 homolog; Ribosome assembly protein BMS1 homolog;)
genome : 48,939,512 - 48,951,787 (12,276)
query : 1 - 2,576 (2,576/2,576)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, extr 5, cyto_nucl 4, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021743)
HIX0021743
HIT000355616_04 (
ENST00000374336
)
(Ribosome biogenesis protein BMS1 homolog; Ribosome assembly protein BMS1 homolog;)
genome : 48,939,543 - 48,950,965 (11,423)
query : 1 - 1,332 (1,332/1,332)
9 exons
identity = 0.996
3'(1.000;1.000;0.979;1.000;1.000;0.995;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13.5, mito 7, nucl 3.5,
E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021743)
HIX0021743
HIT000609262_02 (
ENST00000509393
)
(Ribosome biogenesis protein BMS1 homolog; Ribosome assembly protein BMS1 homolog;)
genome : 48,939,543 - 48,950,964 (11,422)
query : 1 - 1,330 (1,330/1,330)
9 exons
identity = 0.997
3'(1.000;1.000;0.979;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 18, mito 3, pero 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021743)
HIX0021743
HIT000696519_02 (
ENST00000584653
)
(Ribosome biogenesis protein BMS1 homolog; Ribosome assembly protein BMS1 homolog;)
genome : 48,939,543 - 48,950,964 (11,422)
query : 1 - 1,330 (1,330/1,330)
9 exons
identity = 0.997
3'(1.000;1.000;0.979;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 18, mito 3, pero 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021743)
HIX0008797
HIT000005045
(
AK021771
)
Representative transcript
(Conserved hypothetical protein.)
genome : 48,945,438 - 48,947,120 (1,683)
query : 1 - 1,683 (1,683/1,683)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 5.5, cyto 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008797)
HIX0021743
HIT000262003
(
BC065722
)
(Ribosome biogenesis protein BMS1 homolog; Ribosome assembly protein BMS1 homolog;)
genome : 48,947,637 - 48,952,494 (4,858)
query : 5 - 1,195 (1,191/1,224)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 10, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021743)
HIX0035678
HIT000709017 (
ENST00000597237
)
(Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain containing protein.)
genome : 48,952,491 - 48,980,269 (27,779)
query : 1 - 591 (591/591)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14, nucl 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035678)
HIX0035678
HIT000710180 (
ENST00000598412
)
(Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain containing protein.)
genome : 48,952,491 - 48,980,269 (27,779)
query : 1 - 591 (591/591)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14, nucl 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035678)
HIX0035678
HIT000535944 (
ENST00000438010
)
(Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain containing protein.)
genome : 48,952,569 - 48,980,343 (27,775)
query : 1 - 573 (573/573)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14, nucl 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035678)
HIX0035678
HIT000696629 (
ENST00000584765
)
(Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain containing protein.)
genome : 48,952,569 - 48,980,343 (27,775)
query : 1 - 573 (573/573)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14, nucl 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035678)
HIX0035678
HIT000712070 (
ENST00000600326
)
(Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain containing protein.)
genome : 48,953,206 - 48,968,615 (15,410)
query : 1 - 769 (769/769)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 10.5, cyto_nucl 7.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035678)
HIX0035678
HIT000713940 (
ENST00000602207
)
(Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain containing protein.)
genome : 48,953,206 - 48,968,615 (15,410)
query : 1 - 769 (769/769)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 10.5, cyto_nucl 7.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035678)
HIX0035678
HIT000441765_08
(
DQ575234
)
Representative transcript
(Non-protein coding transcript.)
genome : 48,953,458 - 48,953,486 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035678)
HIX0035678
HIT000706323 (
ENST00000594520
)
(Conserved hypothetical protein.)
genome : 48,954,138 - 48,980,269 (26,132)
query : 1 - 932 (932/932)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 11, cyto_nucl 10.5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035678)
HIX0035678
HIT000710863 (
ENST00000599102
)
(Conserved hypothetical protein.)
genome : 48,954,138 - 48,980,269 (26,132)
query : 1 - 932 (932/932)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 11, cyto_nucl 10.5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035678)
HIX0035678
HIT000709339 (
ENST00000597561
)
(Hypothetical short protein.)
genome : 48,954,322 - 48,966,933 (12,612)
query : 1 - 710 (710/710)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035678)
HIX0035678
HIT000709804 (
ENST00000598032
)
(Hypothetical short protein.)
genome : 48,954,322 - 48,966,933 (12,612)
query : 1 - 710 (710/710)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035678)
HIX0035678
HIT000712954 (
ENST00000601214
)
(Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain containing protein.)
genome : 48,961,994 - 48,980,266 (18,273)
query : 1 - 911 (911/911)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 14, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035678)
HIX0035678
HIT000713234 (
ENST00000601495
)
(Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain containing protein.)
genome : 48,961,994 - 48,980,266 (18,273)
query : 1 - 911 (911/911)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 14, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035678)
HIX0035678
HIT000549242 (
ENST00000451308
)
(Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain containing protein.)
genome : 48,962,529 - 48,968,623 (6,095)
query : 1 - 201 (201/201)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13, mito 5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035678)
HIX0035678
HIT000695220_01 (
ENST00000583339
)
(Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain containing protein.)
genome : 48,962,529 - 48,968,623 (6,095)
query : 1 - 201 (201/201)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13, mito 5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035678)
HIX0170331
HIT000546310_02 (
ENST00000448376
)
(Mitogen-activated protein (MAP) kinase phosphatase family protein.)
genome : 48,963,181 - 48,964,127 (947)
query : 1 - 947 (947/947)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10.5, extr_plas 10.5, plas 9.5, cyto 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170331)
HIX0170331
HIT000690034_02 (
ENST00000578088
)
(Mitogen-activated protein (MAP) kinase phosphatase family protein.)
genome : 48,963,181 - 48,964,127 (947)
query : 1 - 947 (947/947)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10.5, extr_plas 10.5, plas 9.5, cyto 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170331)
HIX0170425
HIT000556140 (
ENST00000458206
)
(Proteinase inhibitor I29, cathepsin propeptide domain containing protein.)
genome : 48,980,162 - 48,981,273 (1,112)
query : 1 - 393 (393/393)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13, nucl 6.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170425)
HIX0170425
HIT000692344 (
ENST00000580429
)
(Proteinase inhibitor I29, cathepsin propeptide domain containing protein.)
genome : 48,980,162 - 48,981,273 (1,112)
query : 1 - 393 (393/393)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13, nucl 6.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170425)
HIX0170384
HIT000528218 (
ENST00000430284
)
(Hypothetical short protein.)
genome : 48,988,121 - 48,998,766 (10,646)
query : 1 - 709 (709/709)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170384)
HIX0170384
HIT000694434 (
ENST00000582543
)
(Hypothetical short protein.)
genome : 48,988,121 - 48,998,766 (10,646)
query : 1 - 709 (709/709)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170384)
HIX0170384
HIT000521798 (
ENST00000423864
)
(Hypothetical short protein.)
genome : 48,988,121 - 48,989,268 (1,148)
query : 1 - 491 (491/491)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 9.5, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170384)
HIX0170384
HIT000694277 (
ENST00000582385
)
(Hypothetical short protein.)
genome : 48,988,121 - 48,989,268 (1,148)
query : 1 - 491 (491/491)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 9.5, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170384)
HIX0170372
HIT000517361_02 (
ENST00000419427
)
(Hypothetical protein.)
genome : 49,087,398 - 49,094,515 (7,118)
query : 1 - 1,631 (1,631/1,631)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 12.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170372)
HIX0170312
HIT000583827 (
ENST00000479781
)
(Non-protein coding transcript.)
genome : 49,199,649 - 49,205,776 (6,128)
query : 1 - 242 (242/242)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170312)
HIX0170312
HIT000693731 (
ENST00000581831
)
(Non-protein coding transcript.)
genome : 49,199,649 - 49,205,776 (6,128)
query : 1 - 242 (242/242)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170312)
HIX0170312
HIT000550201_03 (
ENST00000452267
)
(FAM25 family protein.)
genome : 49,203,355 - 49,207,818 (4,464)
query : 1 - 345 (345/345)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170312)
HIX0170312
HIT000555554_03 (
ENST00000457620
)
(FAM25 family protein.)
genome : 49,203,355 - 49,207,818 (4,464)
query : 1 - 345 (345/345)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170312)
HIX0170312
HIT000696681_03 (
ENST00000584817
)
(FAM25 family protein.)
genome : 49,203,355 - 49,207,818 (4,464)
query : 1 - 345 (345/345)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170312)
HIX0170312
HIT000560420_03 (
NM_001137548
)
(FAM25 family protein.)
genome : 49,203,372 - 49,207,825 (4,454)
query : 1 - 335 (335/335)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170312)
HIX0170312
HIT000560421_03 (
NM_001137549
)
(FAM25 family protein.)
genome : 49,203,372 - 49,207,825 (4,454)
query : 1 - 335 (335/335)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170312)
HIX0170312
HIT000560427_03 (
NM_001137556
)
(FAM25 family protein.)
genome : 49,203,372 - 49,207,825 (4,454)
query : 1 - 335 (335/335)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170312)
HIX0170312
HIT000503211_03
(
BC146955
)
Representative transcript
(FAM25 family protein.)
genome : 49,203,372 - 49,207,822 (4,451)
query : 1 - 332 (332/332)
3 exons
identity = 0.997
3'(1.000;1.000;0.990)5'
coverage = 1.000
InterPro :
IPR023243 : FAM25
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170312)
Ortholog candidate ( ->
Evola
)
Canis
sp. (Dog) : ENSCAFT00000025534
Macaca
sp. (Macaque) : ENSMMUT00000022709
Monodelphis
sp. (Opossum) : ENSMODT00000003428
HIX0170312
HIT000503222_03
(
BC146968
)
(FAM25 family protein.)
genome : 49,203,372 - 49,207,822 (4,451)
query : 1 - 332 (332/332)
3 exons
identity = 0.997
3'(1.000;1.000;0.990)5'
coverage = 1.000
InterPro :
IPR023243 : FAM25
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170312)
HIX0170312
HIT000503225_03
(
BC146972
)
(FAM25 family protein.)
genome : 49,203,388 - 49,207,825 (4,438)
query : 1 - 319 (319/319)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR023243 : FAM25
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170312)
HIX0170312
HIT000503237_03
(
BC146989
)
(FAM25 family protein.)
genome : 49,203,388 - 49,207,825 (4,438)
query : 1 - 319 (319/319)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR023243 : FAM25
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170312)
HIX0170312
HIT000503238_03
(
BC146990
)
(FAM25 family protein.)
genome : 49,203,388 - 49,207,825 (4,438)
query : 1 - 319 (319/319)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR023243 : FAM25
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170312)
HIX0170312
HIT000503239_03
(
BC146991
)
(FAM25 family protein.)
genome : 49,203,388 - 49,207,825 (4,438)
query : 1 - 319 (319/319)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR023243 : FAM25
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170312)
HIX0170312
HIT000503268_03
(
BC147022
)
(FAM25 family protein.)
genome : 49,203,388 - 49,207,825 (4,438)
query : 1 - 319 (319/319)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR023243 : FAM25
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170312)
HIX0170312
HIT000503602_03
(
BC171871
)
(FAM25 family protein.)
genome : 49,203,388 - 49,207,825 (4,438)
query : 1 - 319 (319/319)
3 exons
identity = 0.997
3'(1.000;0.984;1.000)5'
coverage = 1.000
InterPro :
IPR023243 : FAM25
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170312)
HIX0170312
HIT000503272_03
(
BC147026
)
(FAM25 family protein.)
genome : 49,203,397 - 49,207,825 (4,429)
query : 1 - 310 (310/310)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR023243 : FAM25
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170312)
HIX0170312
HIT000135393_06 (
ENST00000342763
)
(FAM25 family protein.)
genome : 49,203,399 - 49,207,818 (4,420)
query : 1 - 301 (301/301)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170312)
HIX0170312
HIT000691075_03 (
ENST00000579142
)
(FAM25 family protein.)
genome : 49,203,399 - 49,207,818 (4,420)
query : 1 - 301 (301/301)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170312)
HIX0170910
HIT000532467_03 (
ENST00000434533
)
(Hypothetical short protein.)
genome : 49,212,325 - 49,218,315 (5,991)
query : 1 - 234 (234/234)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170910)
HIX0008794
HIT000132401 (
ENST00000339771
)
(Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 11.)
genome : 49,217,898 - 49,239,743 (21,846)
query : 1 - 2,485 (2,485/2,485)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 9.5, extr_plas 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008794)
HIX0008794
HIT000697085 (
ENST00000585227
)
(Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 11.)
genome : 49,217,898 - 49,239,743 (21,846)
query : 1 - 2,485 (2,485/2,485)
8 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000;0.971;1.000;1.000;
0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 10.5, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008794)
HIX0008794
HIT000522686 (
ENST00000424752
)
(Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 8; AGAP-8; Centaurin-gamma-like family member 5;)
genome : 49,217,974 - 49,239,729 (21,756)
query : 1 - 2,387 (2,387/2,387)
8 exons
identity = 0.997
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 13.5, cyto 6, extr 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008794)
HIX0008794
HIT000694193_03 (
ENST00000582299
)
(Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 8; AGAP-8; Centaurin-gamma-like family member 5;)
genome : 49,217,974 - 49,239,729 (21,756)
query : 1 - 2,387 (2,387/2,387)
8 exons
identity = 0.993
3'(0.992;1.000;1.000;1.000;0.971;1.000;1.000;
0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 14, cyto 6, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008794)
HIX0008794
HIT000389372
(
BC127745
)
Representative transcript
(Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 11.)
genome : 49,218,157 - 49,239,658 (21,502)
query : 1 - 2,140 (2,140/2,140)
8 exons
identity = 0.996
3'(0.995;1.000;1.000;0.990;0.971;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001164 : Arf GTPase activating protein
IPR001849 : Pleckstrin homology domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
0008060 : Molecular Function : ARF GTPase activator activity
0008270 : Molecular Function : zinc ion binding
0032312 : Biological Process : regulation of ARF GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 9.5, extr_plas 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008794)
Ortholog candidate ( ->
Evola
)
Oryzias
sp. (Medaka) : ENSORLT00000001699
HIX0008794
HIT000657906 (
NR_029396
)
(Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 11.)
genome : 49,218,157 - 49,239,658 (21,502)
query : 1 - 2,141 (2,141/2,141)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 9.5, extr_plas 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008794)
HIX0209342
HIT000465122_09
(
DQ598591
)
Representative transcript
(Non-protein coding transcript.)
genome : 49,218,979 - 49,219,008 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209342)
HIX0209342
HIT000454754_09
(
DQ588223
)
(Non-protein coding transcript.)
genome : 49,218,980 - 49,219,008 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209342)
HIX0058794
HIT000018201
(
AK093334
)
(Conserved hypothetical protein.)
genome : 49,244,218 - 49,245,864 (1,647)
query : 1 - 1,646 (1,646/1,646)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 16, nucl 7, mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058794)
HIX0058794
HIT000028242
(
AL833330
)
Representative transcript
(Conserved hypothetical protein.)
genome : 49,244,690 - 49,248,867 (4,178)
query : 1 - 4,184 (4,184/4,204)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 15, extr 15, extr_plas 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058794)
HIX0209357
HIT000615743_03 (
ENST00000516340
)
(Non-protein coding transcript.)
genome : 49,248,476 - 49,248,591 (116)
query : 1 - 116 (116/116)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209357)
HIX0209357
HIT000616348_03 (
ENST00000516945
)
(Non-protein coding transcript.)
genome : 49,248,476 - 49,248,591 (116)
query : 1 - 116 (116/116)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209357)
HIX0209357
HIT000616471_03 (
ENST00000517068
)
(Non-protein coding transcript.)
genome : 49,248,476 - 49,248,591 (116)
query : 1 - 116 (116/116)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209357)
HIX0209357
HIT000690851_03 (
ENST00000578915
)
(Non-protein coding transcript.)
genome : 49,248,476 - 49,248,591 (116)
query : 1 - 116 (116/116)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209357)
HIX0209357
HIT000693633_03 (
ENST00000581731
)
(Non-protein coding transcript.)
genome : 49,248,476 - 49,248,591 (116)
query : 1 - 116 (116/116)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209357)
HIX0170539
HIT000463976_08
(
DQ597445
)
Representative transcript
(Non-protein coding transcript.)
genome : 49,250,364 - 49,250,394 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170539)
HIX0170509
HIT000452015_10
(
DQ585484
)
Representative transcript
(Non-protein coding transcript.)
genome : 49,252,634 - 49,252,663 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170509)
HIX0020417
HIT000007430
(
AK024156
)
Representative transcript
(Conserved hypothetical protein.)
genome : 49,264,443 - 49,265,237 (795)
query : 1 - 795 (795/795)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020417)
HIX0035423
HIT000121021 (
ENST00000316733
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 8.)
genome : 49,272,334 - 49,319,280 (46,947)
query : 1 - 1,137 (1,137/1,137)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, pero 5.5, mito_pero 4, plas 3, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035423)
HIX0035423
HIT000606264 (
ENST00000506185
)
(Protein tyrosine phosphatase, non-receptor type 20 isoform 5.)
genome : 49,272,348 - 49,327,498 (55,151)
query : 1 - 1,255 (1,255/1,255)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, pero 6, nucl 5, plas 3.5, mito_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035423)
HIX0035423
HIT000428788
(
AK309922
)
Representative transcript
(Tyrosine-protein phosphatase non-receptor type 20; hPTPN20; EC=3.1.3.48;)
genome : 49,278,239 - 49,338,996 (60,758)
query : 1 - 1,213 (1,213/1,213)
7 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;0.991;1.000;0.997)5'
coverage = 1.000
EC number :
EC 3.1.3.48
InterPro :
IPR029021 : Protein-tyrosine phosphatase-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10.5, cysk 8, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035423)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168280
Mus
sp. (Mouse) : AK017003
Rattus
sp. (Rat) : BC129117
Pongo
sp. (Orangutan) : ENSPPYT00000002699
Monodelphis
sp. (Opossum) : XM_001371949
Canis
sp. (Dog) : XM_543895
HIX0170839
HIT000527241 (
ENST00000429307
)
(Hypothetical short protein.)
genome : 49,363,368 - 49,364,177 (810)
query : 1 - 421 (421/421)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 7.5, cyto_nucl 6.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170839)
HIX0008804
HIT000339689
(
BC110798
)
(FERM and PDZ domain-containing protein 2 isoform 4.)
genome : 49,364,607 - 49,383,163 (18,557)
query : 1 - 1,864 (1,864/1,933)
6 exons
identity = 0.998
3'(0.999;1.000;0.990;1.000;0.993;0.996)5'
coverage = 1.000
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008804)
HIX0008804
HIT000578854 (
ENST00000474573
)
(PDZ domain containing protein.)
genome : 49,364,601 - 49,384,255 (19,655)
query : 1 - 1,959 (1,959/1,959)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13, cyto 11.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008804)
HIX0008804
HIT000397561 (
NM_001042512
)
(PDZ domain containing protein.)
genome : 49,364,602 - 49,383,186 (18,585)
query : 1 - 1,892 (1,892/1,892)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8, cyto 4, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008804)
HIX0008804
HIT000265177
(
BC073954
)
Representative transcript
(FERM and PDZ domain-containing protein 2 isoform 4.)
genome : 49,364,807 - 49,383,167 (18,361)
query : 1 - 1,668 (1,668/1,711)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.996)5'
coverage = 1.000
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008804)
HIX0008804
HIT000041335
(
BC031614
)
(FERM and PDZ domain-containing protein 2 isoform 4.)
genome : 49,364,811 - 49,384,184 (19,374)
query : 1 - 1,678 (1,678/1,716)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.988;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13, cyto 11.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008804)
HIX0008804
HIT000331841
(
AY491519
)
(FERM and PDZ domain-containing protein 2 isoform 4.)
genome : 49,364,810 - 49,383,186 (18,377)
query : 2 - 1,683 (1,682/1,683)
6 exons
identity = 0.995
3'(0.998;0.991;1.000;0.995;1.000;0.989)5'
coverage = 0.999
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008804)
HIX0008804
HIT000594666 (
ENST00000491130
)
(PDZ domain containing protein.)
genome : 49,364,810 - 49,383,186 (18,377)
query : 1 - 1,684 (1,684/1,684)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9, cyto 4, mito 2, lyso 2, cyto_pero 2,
cyto_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008804)
HIX0008804
HIT000503036
(
BC144635
)
(FERM and PDZ domain-containing protein 2 isoform 4.)
genome : 49,365,226 - 49,383,126 (17,901)
query : 2 - 1,209 (1,208/1,209)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.995)5'
coverage = 0.999
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008804)
HIX0008804
HIT000503037_02
(
BC144636
)
(FERM and PDZ domain-containing protein 2 isoform 4.)
genome : 49,365,226 - 49,383,127 (17,902)
query : 1 - 1,209 (1,209/1,209)
6 exons
identity = 0.998
3'(1.000;0.997;1.000;1.000;1.000;0.995)5'
coverage = 1.000
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 9, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008804)
HIX0008804
HIT000503040
(
BC144639
)
(FERM and PDZ domain-containing protein 2 isoform 4.)
genome : 49,365,226 - 49,383,127 (17,902)
query : 1 - 1,209 (1,209/1,209)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.995)5'
coverage = 1.000
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008804)
HIX0008804
HIT000581845 (
ENST00000477710
)
(PDZ domain containing protein.)
genome : 49,382,938 - 49,384,388 (1,451)
query : 1 - 561 (561/561)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 14.5, cyto_nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008804)
HIX0218881
HIT000249674
(
AK131386
)
Representative transcript
(FERM and PDZ domain-containing protein 2; PDZ domain-containing protein 4; PDZ domain-containing protein 5C;)
genome : 49,385,336 - 49,482,717 (97,382)
query : 1 - 3,466 (3,466/3,466)
20 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000299 : FERM domain
IPR011019 : KIND
IPR012153 : Tyrosine-protein phosphatase non-receptor type 13
IPR018979 : FERM, N-terminal
IPR029071 : Ubiquitin-related domain
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0005856 : Cellular Component : cytoskeleton
0006470 : Biological Process : protein dephosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, lyso 4, cyto_mito 3.83333, mito 3.5, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218881)
HIX0218881
HIT000589923 (
ENST00000486151
)
(Tyrosine-protein phosphatase non-receptor type 13 family protein.)
genome : 49,385,336 - 49,482,717 (97,382)
query : 1 - 3,466 (3,466/3,466)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, lyso 4, cyto_mito 3.83333, mito 3.5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218881)
HIX0218881
HIT000498547
(
AK303923
)
(FERM and PDZ domain-containing protein 2; PDZ domain-containing protein 4; PDZ domain-containing protein 5C;)
genome : 49,392,607 - 49,482,720 (90,114)
query : 1 - 2,615 (2,615/2,633)
19 exons
identity = 0.993
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.922;0.975;1.000;1.000)5'
coverage = 0.993
InterPro :
IPR000299 : FERM domain
IPR001478 : PDZ domain
IPR011019 : KIND
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR018979 : FERM, N-terminal
IPR018980 : FERM, C-terminal PH-like domain
IPR019748 : FERM central domain
IPR019749 : Band 4.1 domain
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
0005856 : Cellular Component : cytoskeleton
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 9.5, cyto_mito 5.83333,
mito_pero 5.83333, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218881)
HIX0218881
HIT000597901 (
ENST00000494505
)
(FERM, C-terminal PH-like domain containing protein.)
genome : 49,395,237 - 49,409,491 (14,255)
query : 1 - 531 (531/531)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 5, nucl 4, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218881)
HIX0218881
HIT000605670 (
ENST00000505547
)
(FERM, C-terminal PH-like domain containing protein.)
genome : 49,407,711 - 49,409,697 (1,987)
query : 1 - 606 (606/606)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 5.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218881)
HIX0218881
HIT000573116 (
ENST00000468556
)
(Tyrosine-protein phosphatase non-receptor type 13 family protein.)
genome : 49,450,089 - 49,459,696 (9,608)
query : 1 - 619 (619/619)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 9, extr_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218881)
HIX0218881
HIT000595546 (
ENST00000492045
)
(KIND domain containing protein.)
genome : 49,456,586 - 49,459,654 (3,069)
query : 1 - 682 (682/682)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13.5, cyto 10.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218881)
HIX0170768
HIT000523099 (
ENST00000425165
)
(Conserved hypothetical protein.)
genome : 49,500,742 - 49,501,460 (719)
query : 1 - 719 (719/719)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, mito 11, cyto 5.5, cyto_nucl 5.5,
extr_plas 5.5, E.R._mito 5.5, mito_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170768)
HIX0008805
HIT000530313 (
ENST00000432379
)
(Mitogen-activated protein (MAP) kinase, JNK family protein.)
genome : 49,514,698 - 49,618,189 (103,492)
query : 1 - 907 (907/907)
7 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 14.8333, cyto_plas 13, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008805)
HIX0008805
HIT000526975 (
ENST00000429041
)
(Mitogen-activated protein (MAP) kinase, JNK family protein.)
genome : 49,514,723 - 49,628,289 (113,567)
query : 1 - 603 (603/603)
5 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 16, nucl 7, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008805)
HIX0008805
HIT000425320
(
AK292523
)
Representative transcript
(Mitogen-activated protein kinase 8; MAP kinase 8; MAPK 8; EC=2.7.11.24; JNK-46; Stress-activated protein kinase 1c; SAPK1c; Stress-activated protein kinase JNK1; c-Jun N-terminal kinase 1;)
genome : 49,514,786 - 49,643,430 (128,645)
query : 1 - 1,769 (1,769/1,769)
12 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.24
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR003527 : Mitogen-activated protein (MAP) kinase, conserved site
IPR008271 : Serine/threonine-protein kinase, active site
IPR008351 : Mitogen-activated protein (MAP) kinase, JNK
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0004707 : Molecular Function : MAP kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008805)
HIX0008805
HIT000524491 (
ENST00000426557
)
(Mitogen-activated protein (MAP) kinase, JNK family protein.)
genome : 49,515,069 - 49,618,187 (103,119)
query : 1 - 860 (860/860)
7 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 14.8333, cyto_plas 13, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008805)
HIX0026112
HIT000057797
(
BX649150
)
Representative transcript
(Conserved hypothetical protein.)
genome : 49,551,376 - 49,562,837 (11,462)
query : 1 - 10,318 (10,318/10,336)
2 exons
identity = 0.998
5'(0.998;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 14, cyto 6.5, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026112)
HIX0219120
HIT000714427 (
ENST00000602694
)
(Conserved hypothetical protein.)
genome : 48,255,279 - 48,279,200 (23,922)
query : 1 - 1,971 (1,971/1,971)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 3, nucl 2, cyto 2, cyto_nucl 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219120)
HIX0219120
HIT000714550 (
ENST00000602817
)
(Conserved hypothetical protein.)
genome : 48,255,279 - 48,279,200 (23,922)
query : 1 - 1,971 (1,971/1,971)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 3, nucl 2, cyto 2, cyto_nucl 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219120)
HIX0219120
HIT000355538 (
ENST00000374258
)
(Conserved hypothetical protein.)
genome : 48,255,279 - 48,279,199 (23,921)
query : 1 - 1,970 (1,970/1,970)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 3, nucl 2, cyto 2, cyto_nucl 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219120)
HIX0219120
HIT000695329 (
ENST00000583448
)
(Conserved hypothetical protein.)
genome : 48,255,279 - 48,279,199 (23,921)
query : 1 - 1,970 (1,970/1,970)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 3, nucl 2, cyto 2, cyto_nucl 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219120)
HIX0219095
HIT000355481 (
ENST00000374201
)
(FERM and PDZ domain-containing protein 2; PDZ domain-containing protein 4; PDZ domain-containing protein 5C;)
genome : 49,364,601 - 49,482,913 (118,313)
query : 1 - 4,997 (4,997/4,997)
29 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 7.5, nucl 5.5, cyto_mito 4.83333,
mito_pero 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219095)
HIX0219095
HIT000365601 (
NM_001018071
)
(FERM and PDZ domain-containing protein 2; PDZ domain-containing protein 4; PDZ domain-containing protein 5C;)
genome : 49,364,602 - 49,482,941 (118,340)
query : 1 - 5,024 (5,024/5,024)
29 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.988;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 7.5, nucl 5.5, cyto_mito 4.83333,
mito_pero 4.83333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219095)
HIX0219095
HIT000505974 (
ENST00000407470
)
(FERM and PDZ domain-containing protein 2; PDZ domain-containing protein 4; PDZ domain-containing protein 5C;)
genome : 49,364,602 - 49,482,941 (118,340)
query : 1 - 4,955 (4,955/4,955)
28 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 7.5, extr_plas 7.5, nucl 5.5,
cyto_mito 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219095)
HIX0219095
HIT000042911
(
AK123038
)
(FERM and PDZ domain-containing protein 2 isoform 4.)
genome : 49,364,602 - 49,459,800 (95,199)
query : 1 - 4,433 (4,433/4,433)
28 exons
identity = 0.998
3'(1.000;0.998;1.000;0.990;1.000;0.993;0.988;
1.000;1.000;0.990;1.000;1.000;1.000;1.000;
1.000;1.000;0.995;0.993;1.000;1.000;0.994;
1.000;1.000;1.000;1.000;1.000;1.000;0.995)5'
coverage = 1.000
InterPro :
IPR000299 : FERM domain
IPR001478 : PDZ domain
IPR011019 : KIND
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR018979 : FERM, N-terminal
IPR018980 : FERM, C-terminal PH-like domain
IPR019748 : FERM central domain
IPR019749 : Band 4.1 domain
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
0005856 : Cellular Component : cytoskeleton
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, E.R. 5, lyso 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219095)
HIX0219095
HIT000117058 (
ENST00000305531
)
(FERM and PDZ domain-containing protein 2; PDZ domain-containing protein 4; PDZ domain-containing protein 5C;)
genome : 49,364,602 - 49,459,800 (95,199)
query : 1 - 4,665 (4,665/4,665)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, E.R. 5, lyso 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219095)
HIX0219095
HIT000306281
(
CR749241
)
Representative transcript
(FERM and PDZ domain-containing protein 2; PDZ domain-containing protein 4; PDZ domain-containing protein 5C;)
genome : 49,364,814 - 49,482,913 (118,100)
query : 1 - 4,784 (4,784/4,804)
29 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.988;1.000;
1.000;1.000;0.991;1.000;1.000;1.000;1.000;
0.987;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000299 : FERM domain
IPR001478 : PDZ domain
IPR011019 : KIND
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR018979 : FERM, N-terminal
IPR018980 : FERM, C-terminal PH-like domain
IPR019748 : FERM central domain
IPR019749 : Band 4.1 domain
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
0005856 : Cellular Component : cytoskeleton
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 7.5, nucl 5.5, cyto_mito 4.83333,
mito_pero 4.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219095)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : CR407180
Bos
sp. (Cow) : ENSBTAT00000031283
Oryzias
sp. (Medaka) : ENSORLT00000011042
Pongo
sp. (Orangutan) : ENSPPYT00000002703
Tetraodon
sp. (Tetraodon) : GSTENT00030622001
Takifugu
sp. (Fugu) : SINFRUT00000151583
Pan
sp. (Chimpanzee) : XM_001135868
Equus
sp. (Horse) : XM_001500557
Canis
sp. (Dog) : XM_543895
Danio
sp. (Zebrafish) : XM_695474
Macaca
sp. (Macaque) : XR_013629
Danio
sp. (Zebrafish) : XR_029324
HIX0219095
HIT000568489 (
ENST00000463706
)
(FERM and PDZ domain-containing protein 2 isoform 4.)
genome : 49,366,936 - 49,386,933 (19,998)
query : 1 - 1,845 (1,845/1,845)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 11, cyto_nucl 11, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219095)
HIX0219095
HIT000096445
(
BC040910
)
(FERM and PDZ domain-containing protein 2 isoform 4.)
genome : 49,367,089 - 49,386,933 (19,845)
query : 1 - 1,692 (1,692/1,763)
9 exons
identity = 0.998
3'(1.000;1.000;0.990;1.000;0.993;0.988;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 8.5, extr 6, mito 6, nucl 4.5,
E.R._mito 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219095)
HIX0219119
HIT000355469 (
ENST00000374189
)
(Mitogen-activated protein (MAP) kinase, JNK family protein.)
genome : 49,514,733 - 49,647,403 (132,671)
query : 1 - 5,796 (5,796/5,796)
12 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 15.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219119)
AL954360.3
48000001-48055707 F +
NCBI
50000
48055708-48105707 N
BX547991.4
48105708-48178094 F +
NCBI
AL603922.4
48178095-48181341 F +
NCBI
AL591684.7
48181342-48279407 F +
NCBI
AL731561.12
48279408-48481919 F +
NCBI
AL606504.14
48481920-48561066 F +
NCBI
BX470080.4
48561067-48563060 F +
NCBI
AL645616.4
48563061-48593395 F +
NCBI
AL358791.24
48593396-48790784 F +
NCBI
BX005072.20
48790785-48886191 F +
NCBI
AL731733.9
48886192-49095536 F +
NCBI
100000
49095537-49195536 N
AL603966.9
49195537-49299273 F +
NCBI
AC013284.9
49299274-49451532 F -
NCBI
AC074325.7
49451533-49600000 F +
NCBI