bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0009064
HIT000244767
(
AJ133133
)
(Ectonucleoside triphosphate diphosphohydrolase 1 isoform 5.)
genome : 97,471,536 - 97,626,465 (154,930)
query : 6 - 2,061 (2,056/2,081)
10 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.988;0.996;1.000;
1.000;0.998)3'
coverage = 0.998
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR000407 : Nucleoside phosphatase GDA1/CD39
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 17, plas 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009064)
HIX0009064
HIT000244768
(
AJ133134
)
(Ectonucleoside triphosphate diphosphohydrolase 1 isoform 5.)
genome : 97,471,536 - 97,606,141 (134,606)
query : 6 - 1,801 (1,796/1,815)
6 exons
identity = 0.990
5'(1.000;1.000;1.000;1.000;0.983)3'
coverage = 0.997
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR000407 : Nucleoside phosphatase GDA1/CD39
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, cyto 6, pero 4, lyso 3, cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009064)
HIX0020122
HIT000660376 (
NR_038444
)
(Conserved hypothetical protein.)
genome : 97,512,963 - 97,849,992 (337,030)
query : 1 - 4,262 (4,262/4,262)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 10
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020122)
HIX0020122
HIT000016263
(
AK091396
)
(Conserved hypothetical protein.)
genome : 97,512,963 - 97,849,971 (337,009)
query : 1 - 4,240 (4,240/4,240)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14, nucl 7.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020122)
HIX0020122
HIT000514235 (
ENST00000416301
)
(Conserved hypothetical protein.)
genome : 97,512,963 - 97,849,971 (337,009)
query : 1 - 4,241 (4,241/4,241)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020122)
HIX0009064
HIT000496083
(
AK301459
)
(Ectonucleoside triphosphate diphosphohydrolase 1 isoform 3.)
genome : 97,515,420 - 97,626,411 (110,992)
query : 1 - 1,892 (1,892/1,892)
10 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;0.988;0.996;
1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR000407 : Nucleoside phosphatase GDA1/CD39
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009064)
HIX0009064
HIT000493272
(
AK298648
)
(Ectonucleoside triphosphate diphosphohydrolase 1 isoform 5.)
genome : 97,515,484 - 97,626,398 (110,915)
query : 1 - 1,861 (1,861/1,861)
10 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;0.988;0.996;
1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR000407 : Nucleoside phosphatase GDA1/CD39
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 16, cyto 12, plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009064)
HIX0009064
HIT000023108
(
AK098278
)
(Conserved hypothetical protein.)
genome : 97,515,553 - 97,517,759 (2,207)
query : 1 - 2,208 (2,208/2,208)
1 exon
identity = 0.989
5'(0.989)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 16.5, nucl 9.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009064)
HIX0009064
HIT000352485 (
ENST00000371205
)
(Ectonucleoside triphosphate diphosphohydrolase 1; NTPDase 1; EC=3.6.1.5; Ecto-ATP diphosphohydrolase 1; Ecto-ATPDase 1; Ecto-ATPase 1; Ecto-apyrase; Lymphoid cell activation antigen; AltName: CD_antigen=CD39;)
genome : 97,515,714 - 97,626,359 (110,646)
query : 1 - 2,035 (2,035/2,035)
10 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.988;0.996;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, E.R. 7, pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009064)
HIX0009064
HIT000498642
(
AK304018
)
Representative transcript
(Ectonucleoside triphosphate diphosphohydrolase 1; NTPDase 1; EC=3.6.1.5; Ecto-ATP diphosphohydrolase 1; Ecto-ATPDase 1; Ecto-ATPase 1; Ecto-apyrase; Lymphoid cell activation antigen; AltName: CD_antigen=CD39;)
genome : 97,515,916 - 97,626,551 (110,636)
query : 5 - 2,031 (2,027/2,031)
10 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;0.988;0.996;
1.000;1.000;0.997)3'
coverage = 0.998
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR000407 : Nucleoside phosphatase GDA1/CD39
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, E.R. 7, pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009064)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : AF005940
Gallus
sp. (Chicken) : AJ720369
Mus
sp. (Mouse) : AK029512
Danio
sp. (Zebrafish) : BC078240
Oryzias
sp. (Medaka) : ENSORLT00000012538
Pongo
sp. (Orangutan) : ENSPPYT00000003017
Takifugu
sp. (Fugu) : SINFRUT00000136797
Macaca
sp. (Macaque) : XM_001100060
Monodelphis
sp. (Opossum) : XM_001374562
Equus
sp. (Horse) : XM_001500628
Pan
sp. (Chimpanzee) : XM_507946
Canis
sp. (Dog) : XM_543939
Rattus
sp. (Rat) : Y15685
HIX0009064
HIT000499460
(
AK304836
)
(Ectonucleoside triphosphate diphosphohydrolase 1 isoform 6.)
genome : 97,515,919 - 97,626,510 (110,592)
query : 1 - 1,830 (1,830/1,830)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.988;0.996;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR000407 : Nucleoside phosphatase GDA1/CD39
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito_pero 8, cyto 7, mito 7, pero 7, plas 4, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009064)
HIX0009064
HIT000216493
(
S73813
)
(Ectonucleoside triphosphate diphosphohydrolase 1; NTPDase 1; EC=3.6.1.5; Ecto-ATP diphosphohydrolase 1; Ecto-ATPDase 1; Ecto-ATPase 1; Ecto-apyrase; Lymphoid cell activation antigen; AltName: CD_antigen=CD39;)
genome : 97,515,930 - 97,626,359 (110,430)
query : 1 - 1,818 (1,818/1,818)
10 exons
identity = 0.996
5'(0.976;1.000;1.000;1.000;1.000;0.988;0.996;
1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR000407 : Nucleoside phosphatase GDA1/CD39
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, E.R. 7, pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009064)
HIX0009064
HIT000587114 (
ENST00000483213
)
(Ectonucleoside triphosphate diphosphohydrolase 1 isoform 6.)
genome : 97,515,935 - 97,607,288 (91,354)
query : 1 - 754 (754/754)
6 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;0.988;0.987)3'
coverage = 1.000
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12, cyto_mito 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009064)
HIX0009064
HIT000053188
(
BC047664
)
(Ectonucleoside triphosphate diphosphohydrolase 1 isoform 6.)
genome : 97,515,936 - 97,626,454 (110,519)
query : 1 - 1,639 (1,639/1,665)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;0.988;0.996;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR000407 : Nucleoside phosphatase GDA1/CD39
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito_pero 8, cyto 7, mito 7, pero 7, plas 4, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009064)
HIX0009064
HIT000222064
(
U87967
)
(Ectonucleoside triphosphate diphosphohydrolase 1; NTPDase 1; EC=3.6.1.5; Ecto-ATP diphosphohydrolase 1; Ecto-ATPDase 1; Ecto-ATPase 1; Ecto-apyrase; Lymphoid cell activation antigen; AltName: CD_antigen=CD39;)
genome : 97,515,967 - 97,626,282 (110,316)
query : 1 - 1,704 (1,704/1,704)
10 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;0.988;0.996;
1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR000407 : Nucleoside phosphatase GDA1/CD39
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, E.R. 7, pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009064)
HIX0009064
HIT000352486 (
ENST00000371206
)
(Ectonucleoside triphosphate diphosphohydrolase 1 isoform 4.)
genome : 97,582,993 - 97,606,153 (23,161)
query : 1 - 1,598 (1,598/1,598)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009064)
HIX0009064
HIT000594207 (
ENST00000490659
)
(Ectonucleoside triphosphate diphosphohydrolase 1 isoform 4.)
genome : 97,582,995 - 97,604,604 (21,610)
query : 1 - 768 (768/768)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009064)
HIX0218835
HIT000531047 (
ENST00000433113
)
(Hypothetical short protein.)
genome : 97,593,265 - 97,633,515 (40,251)
query : 1 - 587 (587/587)
2 exons
identity = 0.995
5'(1.000;0.991)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218835)
HIX0009064
HIT000597478 (
ENST00000494070
)
(Ectonucleoside triphosphate diphosphohydrolase 1 isoform 4.)
genome : 97,599,047 - 97,604,310 (5,264)
query : 1 - 628 (628/628)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009064)
HIX0009064
HIT000566788 (
ENST00000461927
)
(Ectonucleoside triphosphate diphosphohydrolase 1 isoform 4.)
genome : 97,599,057 - 97,602,170 (3,114)
query : 1 - 579 (579/579)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009064)
HIX0009064
HIT000499622
(
AK316009
)
(Ectonucleoside triphosphate diphosphohydrolase 1 isoform 5.)
genome : 97,599,442 - 97,626,315 (26,874)
query : 14 - 1,584 (1,571/1,584)
8 exons
identity = 0.996
5'(0.992;1.000;1.000;0.988;0.996;0.991;1.000;
1.000)3'
coverage = 0.992
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR000407 : Nucleoside phosphatase GDA1/CD39
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 16, cyto 12, plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009064)
HIX0009064
HIT000520095 (
ENST00000422161
)
(Ectonucleoside triphosphate diphosphohydrolase 1 isoform 4.)
genome : 97,604,332 - 97,605,977 (1,646)
query : 1 - 439 (439/439)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15, mito 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009064)
HIX0020122
HIT000549298 (
ENST00000451364
)
(Hypothetical short protein.)
genome : 97,621,070 - 97,849,912 (228,843)
query : 1 - 716 (716/716)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 11, cyto_nucl 4.66667, nucl 4,
cyto_pero 3.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020122)
HIX0127652
HIT000448254
(
DQ581723
)
Representative transcript
(Non-protein coding transcript.)
genome : 97,622,676 - 97,622,705 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0127652)
HIX0218835
HIT000028455
(
AL833543
)
Representative transcript
(Conserved hypothetical protein.)
genome : 97,630,601 - 97,637,021 (6,421)
query : 1 - 6,421 (6,421/6,438)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218835)
HIX0020122
HIT000031572
(
BC003519
)
(Conserved hypothetical protein.)
genome : 97,632,797 - 97,635,709 (2,913)
query : 1 - 2,913 (2,913/2,930)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 7.16667, cyto 6.5, cyto_pero 5,
nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020122)
HIX0218835
HIT000023070
(
AK098240
)
(Conserved hypothetical protein.)
genome : 97,634,111 - 97,637,022 (2,912)
query : 1 - 2,911 (2,911/2,911)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218835)
HIX0020122
HIT000547353 (
ENST00000449419
)
(Conserved hypothetical protein.)
genome : 97,634,841 - 97,667,532 (32,692)
query : 1 - 948 (948/948)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, cyto 15.5, cyto_plas 11, nucl 9,
mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020122)
HIX0020122
HIT000550876 (
ENST00000452942
)
(Conserved hypothetical protein.)
genome : 97,635,039 - 97,667,639 (32,601)
query : 1 - 864 (864/864)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, cyto 15.5, cyto_plas 11, nucl 9,
mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020122)
HIX0020122
HIT000550662 (
ENST00000452728
)
(Conserved hypothetical protein.)
genome : 97,635,145 - 97,849,955 (214,811)
query : 1 - 858 (858/858)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, cyto 15.5, cyto_plas 11, nucl 9,
mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020122)
HIX0020122
HIT000511940 (
ENST00000414006
)
(Conserved hypothetical protein.)
genome : 97,635,283 - 97,667,620 (32,338)
query : 1 - 591 (591/591)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020122)
HIX0020122
HIT000525234 (
ENST00000427300
)
(Non-protein coding transcript.)
genome : 97,664,413 - 97,667,640 (3,228)
query : 1 - 389 (389/389)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020122)
HIX0218916
HIT000714381 (
ENST00000602648
)
(Conserved hypothetical protein.)
genome : 97,667,360 - 97,684,569 (17,210)
query : 1 - 446 (446/446)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 7, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218916)
HIX0218916
HIT000489023
(
AK294399
)
Representative transcript
(Conserved hypothetical protein.)
genome : 97,667,722 - 97,698,480 (30,759)
query : 1 - 1,241 (1,241/1,241)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 11.5, extr 9, nucl 4, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218916)
HIX0218916
HIT000521278 (
ENST00000423344
)
(Conserved hypothetical protein.)
genome : 97,667,722 - 97,698,480 (30,759)
query : 1 - 1,241 (1,241/1,241)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11, extr 9, nucl 4.5,
extr_plas 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218916)
HIX0218916
HIT000559709 (
NM_001130446
)
(Conserved hypothetical protein.)
genome : 97,667,722 - 97,698,415 (30,694)
query : 1 - 1,176 (1,176/1,176)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15, nucl 5.5, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218916)
HIX0020122
HIT000021324
(
AK096469
)
(Conserved hypothetical protein.)
genome : 97,678,695 - 97,849,969 (171,275)
query : 1 - 2,933 (2,933/2,933)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16, nucl 4.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020122)
HIX0020122
HIT000552572 (
ENST00000454638
)
(Conserved hypothetical protein.)
genome : 97,678,695 - 97,849,969 (171,275)
query : 1 - 2,933 (2,933/2,933)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16, nucl 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020122)
HIX0218930
HIT000576828 (
ENST00000472454
)
(Conserved hypothetical protein.)
genome : 97,709,725 - 97,744,452 (34,728)
query : 1 - 1,615 (1,615/1,615)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218930)
HIX0218930
HIT000574067 (
ENST00000469549
)
(Conserved hypothetical protein.)
genome : 97,715,183 - 97,744,785 (29,603)
query : 1 - 2,133 (2,133/2,133)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 15, nucl 6, plas 4, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218930)
HIX0218930
HIT000588523 (
ENST00000484685
)
(Conserved hypothetical protein.)
genome : 97,721,331 - 97,725,710 (4,380)
query : 1 - 454 (454/454)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218930)
HIX0170656
HIT000513626 (
ENST00000415692
)
(Conserved hypothetical protein.)
genome : 97,759,535 - 97,760,000 (466)
query : 1 - 466 (466/466)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170656)
HIX0201509
HIT000315505 (
NM_001001732
)
(Protein CC2D2B isoform 2.)
genome : 97,759,848 - 97,792,441 (32,594)
query : 1 - 1,844 (1,844/1,854)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14, nucl 4.5, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201509)
HIX0201509
HIT000561803 (
NM_001159747
)
(Protein CC2D2B isoform 1.)
genome : 97,759,848 - 97,792,441 (32,594)
query : 1 - 2,114 (2,114/2,124)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 16.5, nucl 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201509)
HIX0201509
HIT000522398 (
ENST00000424464
)
(Protein CC2D2B isoform 2.)
genome : 97,759,848 - 97,773,629 (13,782)
query : 1 - 818 (818/818)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13.5, extr 4, nucl 4, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201509)
HIX0201509
HIT000497001
(
AK302377
)
(Protein CC2D2B isoform 1.)
genome : 97,759,869 - 97,792,140 (32,272)
query : 1 - 1,792 (1,792/1,792)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;0.990;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 16.5, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201509)
HIX0201509
HIT000508032 (
ENST00000410012
)
(Protein CC2D2B isoform 1.)
genome : 97,759,869 - 97,792,140 (32,272)
query : 1 - 1,792 (1,792/1,792)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 16.5, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201509)
HIX0201509
HIT000265673
(
BC075861
)
Representative transcript
(Protein CC2D2B isoform 2.)
genome : 97,759,883 - 97,792,441 (32,559)
query : 1 - 1,809 (1,809/1,890)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14, nucl 4.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201509)
Ortholog candidate ( ->
Evola
)
Monodelphis
sp. (Opossum) : ENSMODT00000006140
Oryzias
sp. (Medaka) : ENSORLT00000005880
Pongo
sp. (Orangutan) : ENSPPYT00000003020
Takifugu
sp. (Fugu) : SINFRUT00000130629
Mus
sp. (Mouse) : XM_001000795
Equus
sp. (Horse) : XM_001500593
Rattus
sp. (Rat) : XM_220005
Pan
sp. (Chimpanzee) : XM_507946
Canis
sp. (Dog) : XM_543941
HIX0201509
HIT000137016 (
ENST00000344386
)
(Protein CC2D2B isoform 2.)
genome : 97,759,883 - 97,792,441 (32,559)
query : 1 - 1,809 (1,809/1,809)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14, nucl 4.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201509)
HIX0020122
HIT000556162 (
ENST00000458228
)
(Protein CC2D2B isoform 1.)
genome : 97,778,507 - 97,849,982 (71,476)
query : 1 - 3,244 (3,244/3,274)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020122)
HIX0020122
HIT000091631
(
BC028619
)
Representative transcript
(Protein CC2D2B isoform 1.)
genome : 97,778,507 - 97,849,986 (71,480)
query : 6 - 3,253 (3,248/3,282)
4 exons
identity = 0.997
3'(0.996;1.000;1.000;0.996)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020122)
HIX0201509
HIT000005477
(
AK022203
)
(Protein CC2D2B isoform 2.)
genome : 97,778,508 - 97,781,334 (2,827)
query : 1 - 2,828 (2,828/2,828)
1 exon
identity = 0.988
5'(0.988)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201509)
HIX0020122
HIT000547131 (
ENST00000449197
)
(Conserved hypothetical protein.)
genome : 97,781,035 - 97,802,602 (21,568)
query : 1 - 523 (523/523)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020122)
HIX0020122
HIT000525780 (
ENST00000427846
)
(Hypothetical short protein.)
genome : 97,802,235 - 97,849,995 (47,761)
query : 1 - 749 (749/749)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16, nucl 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020122)
HIX0201473
HIT000052782
(
BC043175
)
Representative transcript
(Cyclin-J isoform 2.)
genome : 97,803,151 - 97,820,622 (17,472)
query : 3 - 4,111 (4,109/4,126)
6 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.999
InterPro :
IPR004367 : Cyclin, C-terminal domain
IPR006671 : Cyclin, N-terminal
IPR013763 : Cyclin-like
IPR028859 : Cyclin-J
GO :
0005634 : Cellular Component : nucleus
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11.5, extr 7, nucl 5, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201473)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK157841
Gallus
sp. (Chicken) : BX935733
Equus
sp. (Horse) : ENSECAT00000016852
Oryzias
sp. (Medaka) : ENSORLT00000006885
Pongo
sp. (Orangutan) : ENSPPYT00000003021
Pan
sp. (Chimpanzee) : ENSPTRT00000005278
Rattus
sp. (Rat) : ENSRNOT00000019521
Tetraodon
sp. (Tetraodon) : GSTENT00006556001
Macaca
sp. (Macaque) : XM_001092632
Monodelphis
sp. (Opossum) : XM_001366908
Canis
sp. (Dog) : XM_543942
Danio
sp. (Zebrafish) : XM_680680
Bos
sp. (Cow) : XM_864570
HIX0201473
HIT000109915 (
ENST00000265992
)
(Cyclin-J isoform 2.)
genome : 97,803,151 - 97,820,627 (17,477)
query : 1 - 4,115 (4,115/4,115)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11.5, extr 7, nucl 5, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201473)
HIX0201473
HIT000504642 (
ENST00000403870
)
(Cyclin-J isoform 3.)
genome : 97,803,151 - 97,819,345 (16,195)
query : 1 - 2,830 (2,830/2,830)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 12, extr 6, nucl 5, E.R. 3,
extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201473)
HIX0201473
HIT000207603 (
NM_019084
)
(Cyclin-J isoform 2.)
genome : 97,803,159 - 97,820,624 (17,466)
query : 1 - 4,104 (4,104/4,120)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11.5, extr 7, nucl 5, E.R. 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201473)
HIX0201473
HIT000559899 (
NM_001134375
)
(Cyclin-J isoform 1.)
genome : 97,803,159 - 97,820,624 (17,466)
query : 1 - 4,137 (4,137/4,153)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13, cyto_nucl 12, nucl 7, extr 6, E.R. 3,
extr_plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201473)
HIX0201473
HIT000559900 (
NM_001134376
)
(Cyclin-J isoform 3.)
genome : 97,803,159 - 97,820,624 (17,466)
query : 1 - 4,101 (4,101/4,117)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 12, extr 6, nucl 5, E.R. 3,
extr_plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201473)
HIX0201473
HIT000017227
(
AK092360
)
(Cyclin-J isoform 2.)
genome : 97,803,340 - 97,820,623 (17,284)
query : 1 - 3,029 (3,029/3,029)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.999;0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15.5, nucl 8.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201473)
HIX0201473
HIT000634019 (
ENST00000534974
)
(Cyclin-J isoform 2.)
genome : 97,803,340 - 97,820,623 (17,284)
query : 1 - 3,031 (3,031/3,031)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11.5, extr 7, nucl 5, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201473)
HIX0201473
HIT000569858 (
ENST00000465148
)
(Cyclin-J isoform 1.)
genome : 97,803,340 - 97,819,345 (16,006)
query : 1 - 2,677 (2,677/2,677)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13, cyto_nucl 12, nucl 7, extr 6, E.R. 3,
extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201473)
HIX0201473
HIT000491888
(
AK297264
)
(Cyclin-J isoform 1.)
genome : 97,803,340 - 97,818,336 (14,997)
query : 1 - 1,668 (1,668/1,668)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004367 : Cyclin, C-terminal domain
IPR006671 : Cyclin, N-terminal
IPR013763 : Cyclin-like
IPR028859 : Cyclin-J
GO :
0005634 : Cellular Component : nucleus
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13, cyto_nucl 12, nucl 7, extr 6, E.R. 3,
extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201473)
HIX0201473
HIT000004231
(
AK001757
)
(Cyclin-J isoform 2.)
genome : 97,816,556 - 97,820,623 (4,068)
query : 1 - 3,361 (3,361/3,361)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15.5, nucl 8.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201473)
HIX0201473
HIT000497642
(
AK303018
)
(Cyclin-J isoform 1.)
genome : 97,816,566 - 97,818,429 (1,864)
query : 1 - 1,195 (1,195/1,195)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15.5, nucl 8.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201473)
HIX0201473
HIT000009206
(
AK025932
)
(Hypothetical short protein.)
genome : 97,818,689 - 97,820,624 (1,936)
query : 1 - 1,936 (1,936/1,952)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 3, cyto 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201473)
HIX0009068
HIT000003448
(
AK000974
)
Representative transcript
(Conserved hypothetical protein.)
genome : 97,820,401 - 97,823,487 (3,087)
query : 1 - 2,441 (2,441/2,441)
2 exons
identity = 0.998
3'(0.999;0.988)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 7, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009068)
HIX0209493
HIT000659377 (
NR_036113
)
(Non-protein coding transcript.)
genome : 97,824,072 - 97,824,156 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209493)
HIX0209493
HIT000690627 (
ENST00000578688
)
(Non-protein coding transcript.)
genome : 97,824,072 - 97,824,156 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209493)
HIX0020122
HIT000542309 (
ENST00000444375
)
(Hypothetical short protein.)
genome : 97,848,666 - 97,849,956 (1,291)
query : 1 - 617 (617/617)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16, nucl 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020122)
HIX0035583
HIT000094487
(
BC036585
)
Representative transcript
(Conserved hypothetical protein.)
genome : 97,867,931 - 97,870,094 (2,164)
query : 1 - 2,164 (2,164/2,179)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 9.5, mito 8, extr 6, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035583)
HIX0026075
HIT000051040
(
BC031678
)
Representative transcript
(Hypothetical short protein.)
genome : 97,888,812 - 97,890,249 (1,438)
query : 1 - 1,438 (1,438/1,496)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 8, extr_plas 8, cyto_nucl 7.66667,
cyto_pero 5.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026075)
HIX0009070
HIT000306204
(
CR627437
)
(Zinc finger protein 518A;)
genome : 97,889,472 - 97,922,490 (33,019)
query : 2 - 7,270 (7,269/7,320)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009070)
HIX0009070
HIT000317151 (
NM_014803
)
(Zinc finger protein 518A;)
genome : 97,889,472 - 97,923,517 (34,046)
query : 1 - 8,296 (8,296/8,296)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009070)
HIX0009070
HIT000633993 (
ENST00000534948
)
(Zinc finger protein 518A.)
genome : 97,889,472 - 97,923,508 (34,037)
query : 1 - 8,284 (8,284/8,284)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009070)
HIX0009070
HIT000680636 (
ENST00000567632
)
(Zinc finger protein 518A;)
genome : 97,889,472 - 97,922,498 (33,027)
query : 1 - 7,276 (7,276/7,276)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009070)
HIX0009070
HIT000685211 (
ENST00000572626
)
(Zinc finger protein 518A;)
genome : 97,889,472 - 97,922,490 (33,019)
query : 1 - 7,269 (7,269/7,269)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009070)
HIX0009070
HIT000592335 (
ENST00000488700
)
(Conserved hypothetical protein.)
genome : 97,889,492 - 97,915,776 (26,285)
query : 1 - 729 (729/729)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, extr 8, cyto_nucl 7.66667, cyto 6.5,
nucl 5.5, E.R._mito 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009070)
HIX0009070
HIT000702836 (
ENST00000591012
)
(Hypothetical short protein.)
genome : 97,889,492 - 97,915,776 (26,285)
query : 1 - 729 (729/729)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, extr 8, cyto_nucl 7.66667, cyto 6.5,
nucl 5.5, E.R._mito 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009070)
HIX0009070
HIT000120737 (
ENST00000316045
)
(Zinc finger protein 518A.)
genome : 97,889,656 - 97,920,530 (30,875)
query : 1 - 3,453 (3,453/3,453)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009070)
HIX0009070
HIT000339214
(
BC109045
)
Representative transcript
(Zinc finger protein 518A.)
genome : 97,889,656 - 97,920,530 (30,875)
query : 1 - 3,456 (3,456/3,456)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009070)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK041506
Rattus
sp. (Rat) : BC099801
Gallus
sp. (Chicken) : ENSGALT00000011284
Pongo
sp. (Orangutan) : ENSPPYT00000003022
Macaca
sp. (Macaque) : XM_001100614
Pan
sp. (Chimpanzee) : XM_001158155
Danio
sp. (Zebrafish) : XM_001338990
Equus
sp. (Horse) : XM_001501787
Bos
sp. (Cow) : XM_603021
Monodelphis
sp. (Opossum) : XR_030391
HIX0009070
HIT000339215
(
BC109046
)
(Zinc finger protein 518A.)
genome : 97,889,661 - 97,920,530 (30,870)
query : 1 - 3,451 (3,451/3,451)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009070)
HIX0009070
HIT000092248
(
BC030967
)
(Zinc finger protein 518A.)
genome : 97,889,813 - 97,917,094 (27,282)
query : 1 - 1,579 (1,579/1,608)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR027760 : Zinc finger protein 518A
IPR027775 : C2H2- zinc finger protein family
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006351 : Biological Process : transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009070)
HIX0009070
HIT000582204 (
ENST00000478086
)
(Zinc finger protein 518A.)
genome : 97,889,813 - 97,917,094 (27,282)
query : 1 - 1,579 (1,579/1,579)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009070)
HIX0009070
HIT000699910 (
ENST00000588069
)
(Zinc finger protein 518A.)
genome : 97,889,813 - 97,917,094 (27,282)
query : 1 - 1,579 (1,579/1,579)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009070)
HIX0009070
HIT000638711 (
ENST00000539666
)
(Hypothetical short protein.)
genome : 97,889,813 - 97,911,323 (21,511)
query : 1 - 485 (485/485)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009070)
HIX0009070
HIT000701520 (
ENST00000589682
)
(Hypothetical short protein.)
genome : 97,889,813 - 97,911,323 (21,511)
query : 1 - 485 (485/485)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009070)
HIX0009070
HIT000020172
(
AK095317
)
(Hypothetical short protein.)
genome : 97,889,813 - 97,892,666 (2,854)
query : 1 - 2,856 (2,856/2,856)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 8, extr_plas 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009070)
HIX0009070
HIT000698033 (
ENST00000586181
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,889,829 - 97,965,045 (75,217)
query : 1 - 1,595 (1,595/1,595)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009070)
HIX0009070
HIT000676358 (
ENST00000563195
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,889,829 - 97,965,044 (75,216)
query : 1 - 1,594 (1,594/1,594)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009070)
HIX0009070
HIT000588605 (
ENST00000484770
)
(Hypothetical short protein.)
genome : 97,890,436 - 97,892,666 (2,231)
query : 1 - 468 (468/468)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 11.5, cyto_nucl 9.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009070)
HIX0009070
HIT000698602 (
ENST00000586756
)
(Hypothetical short protein.)
genome : 97,890,436 - 97,892,666 (2,231)
query : 1 - 468 (468/468)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 11.5, cyto_nucl 9.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009070)
HIX0035473
HIT000068220
(
AF090887
)
Representative transcript
(Conserved hypothetical protein.)
genome : 97,910,896 - 97,913,281 (2,386)
query : 1 - 2,385 (2,385/2,399)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15.5, extr_plas 10, cyto 7, nucl 4, cyto_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035473)
HIX0009070
HIT000352472 (
ENST00000371192
)
(Zinc finger protein 518A;)
genome : 97,915,100 - 97,923,517 (8,418)
query : 1 - 8,269 (8,269/8,269)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009070)
HIX0009070
HIT000000041
(
AB002333
)
(Zinc finger protein 518A;)
genome : 97,915,100 - 97,923,394 (8,295)
query : 1 - 8,147 (8,147/8,147)
2 exons
identity = 0.999
5'(0.999;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009070)
HIX0009070
HIT000697968 (
ENST00000586116
)
(Zinc finger protein 518A.)
genome : 97,915,100 - 97,920,305 (5,206)
query : 1 - 5,058 (5,058/5,058)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009070)
HIX0009070
HIT000540569 (
ENST00000442635
)
(Conserved hypothetical protein.)
genome : 97,915,770 - 97,963,885 (48,116)
query : 1 - 300 (300/300)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009070)
HIX0009070
HIT000697612 (
ENST00000585758
)
(Hypothetical short protein.)
genome : 97,915,770 - 97,963,885 (48,116)
query : 1 - 300 (300/300)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009070)
HIX0127351
HIT000437796
(
DQ571265
)
Representative transcript
(Non-protein coding transcript.)
genome : 97,925,644 - 97,925,674 (31)
query : 1 - 31 (31/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0127351)
HIX0170845
HIT000688972 (
ENST00000576987
)
(Nucleoplasmin core domain containing protein.)
genome : 97,949,116 - 97,949,975 (860)
query : 1 - 860 (860/860)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 16.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170845)
HIX0170845
HIT000527668 (
ENST00000429734
)
(Nucleoplasmin core domain containing protein.)
genome : 97,949,122 - 97,949,975 (854)
query : 1 - 854 (854/854)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 16.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170845)
HIX0009071
HIT000384676
(
AK225546
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,010 - 98,031,316 (80,307)
query : 1 - 2,185 (2,185/2,200)
16 exons
identity = 0.998
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.976;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 13.5, cyto 8.5, mito 2, pero 2,
mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000038468
(
BC018906
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,462 - 98,031,247 (79,786)
query : 1 - 1,730 (1,730/1,784)
17 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.976;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14, cyto 8.5, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000339473
(
BC110298
)
(B-cell linker protein isoform 2.)
genome : 97,951,462 - 98,031,265 (79,804)
query : 1 - 1,572 (1,572/1,620)
16 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;0.969;1.000;1.000;
1.000;1.000;1.000;1.000;0.973;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 12.5, nucl 6, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000065590
(
AF068180
)
Representative transcript
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,462 - 98,031,301 (79,840)
query : 9 - 1,791 (1,783/1,806)
17 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.976;
1.000;1.000;0.995)5'
coverage = 0.996
InterPro :
IPR000980 : SH2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14, cyto 8.5, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AF089727
Danio
sp. (Zebrafish) : AF388205
Rattus
sp. (Rat) : BC098790
Bos
sp. (Cow) : BC105353
Equus
sp. (Horse) : ENSECAT00000016724
Oryzias
sp. (Medaka) : ENSORLT00000000818
Pongo
sp. (Orangutan) : ENSPPYT00000003023
Macaca
sp. (Macaque) : XM_001100700
Pan
sp. (Chimpanzee) : XM_001159266
Monodelphis
sp. (Opossum) : XM_001374401
Canis
sp. (Dog) : XM_543943
Mus
sp. (Mouse) : Y17159
HIX0009071
HIT000065591
(
AF068181
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,462 - 98,031,301 (79,840)
query : 9 - 1,722 (1,714/1,737)
16 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.976;1.000;
1.000;0.995)5'
coverage = 0.995
InterPro :
IPR000980 : SH2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 13.5, cyto 8.5, mito 2, pero 2,
mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000204292 (
NM_013314
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,455 - 98,031,333 (79,879)
query : 1 - 1,823 (1,823/1,829)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14, cyto 8.5, mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000485941 (
NM_001114094
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,455 - 98,031,333 (79,879)
query : 1 - 1,754 (1,754/1,760)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 13.5, cyto 8.5, mito 2, pero 2,
mito_pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000724297 (
NM_001258440
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,455 - 98,031,273 (79,819)
query : 1 - 1,607 (1,607/1,613)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 13.5, cyto 6, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000724298 (
NM_001258441
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,455 - 98,031,273 (79,819)
query : 1 - 1,538 (1,538/1,544)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12.5, cyto 6.5, mito 5, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000724299 (
NM_001258442
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,455 - 98,031,273 (79,819)
query : 1 - 1,292 (1,292/1,298)
13 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.956;1.000;1.000;1.000;1.000)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11.5, cyto 7.5, mito 7, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000727075 (
NR_047680
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,455 - 98,031,273 (79,819)
query : 1 - 1,587 (1,587/1,593)
16 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.973;1.000;1.000;
1.000;1.000)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 12.5, nucl 6, mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000727076 (
NR_047681
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,455 - 98,031,273 (79,819)
query : 1 - 1,535 (1,535/1,541)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 12, mito 5, cyto 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000727077 (
NR_047682
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,455 - 98,031,273 (79,819)
query : 1 - 1,530 (1,530/1,536)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10, nucl 7.5, mito 7, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000727078 (
NR_047683
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,455 - 98,031,273 (79,819)
query : 1 - 1,468 (1,468/1,474)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 10, mito 7, cyto 5.5, extr 4,
mito_pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000686685 (
ENST00000574329
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,458 - 98,031,302 (79,845)
query : 1 - 1,789 (1,789/1,789)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14, cyto 8.5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000103834 (
ENST00000224337
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,458 - 98,031,297 (79,840)
query : 1 - 1,784 (1,784/1,784)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14, cyto 8.5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000352456 (
ENST00000371176
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,458 - 98,031,297 (79,840)
query : 1 - 1,715 (1,715/1,715)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 13.5, cyto 8.5, mito 2, pero 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000687244 (
ENST00000574984
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,458 - 98,031,296 (79,839)
query : 1 - 1,714 (1,714/1,714)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 13.5, cyto 8.5, mito 2, pero 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000511410 (
ENST00000413476
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,463 - 98,031,333 (79,871)
query : 1 - 1,659 (1,659/1,659)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 13.5, cyto 6, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000525301 (
ENST00000427367
)
(B-cell linker protein isoform 3.)
genome : 97,951,463 - 98,031,333 (79,871)
query : 1 - 1,710 (1,710/1,710)
17 exons
identity = 0.997
3'(1.000;0.911;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 14.5, cyto 6, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000011051
(
AK027779
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,463 - 98,031,268 (79,806)
query : 1 - 1,750 (1,750/1,750)
17 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.977;
1.000;1.000;1.000;1.000;1.000;1.000;0.976;
1.000;1.000;0.994)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14, cyto 8.5, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000331491
(
AM180346
)
(B-cell linker protein isoform 3.)
genome : 97,951,729 - 98,031,193 (79,465)
query : 2 - 1,238 (1,237/1,238)
14 exons
identity = 0.996
3'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.973;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000980 : SH2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 12, mito 8, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000331472
(
AM180327
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,729 - 98,031,155 (79,427)
query : 1 - 900 (900/900)
13 exons
identity = 0.992
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.956;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11.5, cyto 7.5, mito 7, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000331473
(
AM180328
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,729 - 98,031,155 (79,427)
query : 1 - 555 (555/555)
7 exons
identity = 0.998
3'(1.000;1.000;1.000;0.976;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, nucl 11, cyto 10, mito 6, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000331474
(
AM180329
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,729 - 98,031,155 (79,427)
query : 1 - 400 (400/400)
6 exons
identity = 0.978
3'(1.000;0.933;0.976;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 11.5, cyto 6, mito 6, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000331475
(
AM180330
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,729 - 98,031,155 (79,427)
query : 1 - 709 (709/709)
8 exons
identity = 0.986
3'(0.978;0.924;1.000;1.000;0.976;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 10, mito 7, cyto 5.5, extr 4,
mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000331476
(
AM180331
)
(B-cell linker protein isoform 5.)
genome : 97,951,729 - 98,031,155 (79,427)
query : 1 - 548 (548/548)
7 exons
identity = 0.995
3'(1.000;1.000;0.993;0.976;1.000;0.985;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, cyto_nucl 11, mito 5, nucl 4, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000331477
(
AM180332
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,729 - 98,031,155 (79,427)
query : 1 - 1,146 (1,146/1,146)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12.5, cyto 6.5, mito 5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000331478
(
AM180333
)
(B-cell linker protein isoform 4.)
genome : 97,951,729 - 98,031,155 (79,427)
query : 1 - 1,302 (1,302/1,302)
16 exons
identity = 0.999
3'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14, cyto 9, mito 2, pero 2,
mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000331479
(
AM180334
)
(B-cell linker protein isoform 4.)
genome : 97,951,729 - 98,031,155 (79,427)
query : 1 - 1,302 (1,302/1,302)
16 exons
identity = 0.999
3'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14, cyto 9, mito 2, pero 2,
mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000331480
(
AM180335
)
(B-cell linker protein; B-cell adapter SH2 domain-containing protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,729 - 98,031,155 (79,427)
query : 1 - 940 (940/940)
13 exons
identity = 0.999
3'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12.5, extr 8, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000331481
(
AM180336
)
(B-cell linker protein isoform 4.)
genome : 97,951,729 - 98,031,155 (79,427)
query : 1 - 1,266 (1,266/1,266)
17 exons
identity = 0.994
3'(0.992;0.911;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 14.5, cyto 6, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000331482
(
AM180337
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,729 - 98,031,155 (79,427)
query : 1 - 1,215 (1,215/1,215)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 13.5, cyto 6, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000331483
(
AM180338
)
(B-cell linker protein isoform 4.)
genome : 97,951,729 - 98,031,155 (79,427)
query : 1 - 1,143 (1,143/1,143)
15 exons
identity = 0.998
3'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.976;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 12, mito 5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000331484
(
AM180339
)
(B-cell linker protein isoform 2.)
genome : 97,951,729 - 98,031,155 (79,427)
query : 1 - 1,138 (1,138/1,138)
15 exons
identity = 0.998
3'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.976;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10, nucl 7.5, mito 7, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000331485
(
AM180340
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,729 - 98,031,155 (79,427)
query : 1 - 1,076 (1,076/1,076)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.976;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 10, mito 7, cyto 5.5, extr 4,
mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000331486
(
AM180341
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,729 - 98,031,155 (79,427)
query : 1 - 413 (413/413)
5 exons
identity = 0.978
3'(1.000;0.952;0.976;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13.5, cyto 9.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000331487
(
AM180342
)
(B-cell linker protein isoform 3.)
genome : 97,951,729 - 98,031,155 (79,427)
query : 1 - 1,165 (1,165/1,165)
15 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.976;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 12, cyto_golg 8, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000331488
(
AM180343
)
(B-cell linker protein; B-cell adapter SH2 domain-containing protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,729 - 98,031,155 (79,427)
query : 1 - 1,321 (1,321/1,321)
16 exons
identity = 0.998
3'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.976;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, nucl 12, cyto_golg 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000331489
(
AM180344
)
(B-cell linker protein; B-cell adapter SH2 domain-containing protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,951,729 - 98,031,155 (79,427)
query : 1 - 1,211 (1,211/1,211)
14 exons
identity = 0.999
3'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_golg 11.5, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000331490
(
AM180345
)
(B-cell linker protein isoform 3.)
genome : 97,951,729 - 98,031,155 (79,427)
query : 1 - 1,026 (1,026/1,026)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.976;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 11, extr 7, cyto_mito 7, cyto_pero 7,
cyto_plas 7, cyto_golg 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000589014 (
ENST00000485193
)
(B-cell linker protein isoform 5.)
genome : 97,959,722 - 97,964,610 (4,889)
query : 1 - 625 (625/625)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, extr 8, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000688284 (
ENST00000576195
)
(B-cell linker protein isoform 5.)
genome : 97,959,722 - 97,964,610 (4,889)
query : 1 - 625 (625/625)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, extr 8, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000683611 (
ENST00000570770
)
(B-cell linker protein isoform 4.)
genome : 97,960,763 - 97,970,066 (9,304)
query : 1 - 713 (713/713)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 6.5, cyto 5.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000572398 (
ENST00000467799
)
(B-cell linker protein isoform 4.)
genome : 97,964,288 - 98,031,265 (66,978)
query : 1 - 836 (836/836)
11 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.973;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 12.5, nucl 6, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000683457 (
ENST00000570590
)
(B-cell linker protein isoform 4.)
genome : 97,964,288 - 98,031,265 (66,978)
query : 1 - 836 (836/836)
11 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.973;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 12.5, nucl 6, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000572829 (
ENST00000468252
)
(B-cell linker protein isoform 4.)
genome : 97,966,756 - 97,970,059 (3,304)
query : 1 - 547 (547/557)
3 exons
identity = 0.995
3'(0.944;1.000;1.000)5'
coverage = 0.982
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000577127 (
ENST00000472763
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,975,605 - 97,987,253 (11,649)
query : 1 - 1,138 (1,138/1,138)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 10, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000684611 (
ENST00000571927
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,976,110 - 97,987,253 (11,144)
query : 1 - 633 (633/633)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 10, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000598635 (
ENST00000495266
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,998,644 - 98,031,155 (32,512)
query : 1 - 440 (440/440)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 12, mito 5, extr 4, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009071
HIT000683550 (
ENST00000570697
)
(B-cell linker protein; B-cell adapter containing a SH2 domain protein; B-cell adapter containing a Src homology 2 domain protein; Cytoplasmic adapter protein; Src homology 2 domain-containing leukocyte protein of 65 kDa; SLP-65;)
genome : 97,998,644 - 98,031,155 (32,512)
query : 1 - 440 (440/440)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 12, mito 5, extr 4, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009071)
HIX0009072
pHIT000109317 ( pHIT000109317 )
(Conserved hypothetical protein.)
genome : 98,027,032 - 98,095,989 (68,958)
query : 1 - 1,689 (1,689/1,689)
12 exons
InterPro :
IPR001357 : BRCT domain
IPR001726 : DNA nucleotidylexotransferase (TdT) / DNA-directed DNA/RNA polymerase mu
IPR002054 : DNA-directed DNA polymerase X
IPR010996 : DNA polymerase beta-like, N-terminal domain
IPR018944 : DNA polymerase lambda, fingers domain
IPR022312 : DNA polymerase family X
IPR027421 : DNA polymerase family X lyase domain
IPR029398 : DNA polymerase beta, thumb domain
GO :
0003677 : Molecular Function : DNA binding
0003824 : Molecular Function : catalytic activity
0003887 : Molecular Function : DNA-directed DNA polymerase activity
0016779 : Molecular Function : nucleotidyltransferase activity
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009072)
CAGE tag :
T10R05D90586
HIX0035665
HIT000552418 (
ENST00000454484
)
(Hypothetical protein.)
genome : 98,052,442 - 98,066,452 (14,011)
query : 1 - 1,924 (1,924/1,924)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035665)
HIX0009072
HIT000194868
(
M22968
)
(Conserved hypothetical protein.)
genome : 98,063,545 - 98,064,467 (923)
query : 1 - 922 (922/922)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 8, mito 4, cyto_pero 4, cyto_plas 4,
cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009072)
HIX0009072
HIT000200862 (
NM_004088
)
(DNA nucleotidylexotransferase (TdT) / DNA-directed DNA/RNA polymerase mu family protein.)
genome : 98,064,085 - 98,098,320 (34,236)
query : 1 - 2,039 (2,039/2,071)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.7.31
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, cyto 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009072)
HIX0009072
HIT000365503 (
NM_001017520
)
(DNA nucleotidylexotransferase (TdT) / DNA-directed DNA/RNA polymerase mu family protein.)
genome : 98,064,085 - 98,098,320 (34,236)
query : 1 - 2,036 (2,036/2,068)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.7.31
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, cyto 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009072)
HIX0009072
HIT000517109 (
ENST00000419175
)
(DNA nucleotidylexotransferase (TdT) / DNA-directed DNA/RNA polymerase mu family protein.)
genome : 98,064,085 - 98,098,300 (34,216)
query : 1 - 2,016 (2,016/2,016)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.7.31
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009072)
HIX0009072
HIT000352454 (
ENST00000371174
)
(DNA nucleotidylexotransferase (TdT) / DNA-directed DNA/RNA polymerase mu family protein.)
genome : 98,064,153 - 98,098,321 (34,169)
query : 1 - 1,972 (1,972/1,972)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.7.31
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009072)
HIX0009072
HIT000059455
(
AB046378
)
Representative transcript
(DNA nucleotidylexotransferase (TdT) / DNA-directed DNA/RNA polymerase mu family protein.)
genome : 98,064,153 - 98,098,319 (34,167)
query : 1 - 1,969 (1,969/1,969)
11 exons
identity = 0.998
5'(0.997;0.989;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 2.7.7.31
InterPro :
IPR001357 : BRCT domain
IPR001726 : DNA nucleotidylexotransferase (TdT) / DNA-directed DNA/RNA polymerase mu
IPR002054 : DNA-directed DNA polymerase X
IPR010996 : DNA polymerase beta-like, N-terminal domain
IPR018944 : DNA polymerase lambda, fingers domain
IPR019843 : DNA polymerase family X, binding site
IPR022312 : DNA polymerase family X
IPR027421 : DNA polymerase family X lyase domain
IPR028207 : DNA polymerase beta, palm domain
IPR029398 : DNA polymerase beta, thumb domain
GO :
0003677 : Molecular Function : DNA binding
0003824 : Molecular Function : catalytic activity
0003887 : Molecular Function : DNA-directed DNA polymerase activity
0016779 : Molecular Function : nucleotidyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009072)
HIX0009072
HIT000432481
(
AK313615
)
(DNA nucleotidylexotransferase (TdT) / DNA-directed DNA/RNA polymerase mu family protein.)
genome : 98,064,176 - 98,097,981 (33,806)
query : 1 - 1,609 (1,609/1,609)
11 exons
identity = 0.999
5'(1.000;0.989;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001357 : BRCT domain
IPR001726 : DNA nucleotidylexotransferase (TdT) / DNA-directed DNA/RNA polymerase mu
IPR002054 : DNA-directed DNA polymerase X
IPR010996 : DNA polymerase beta-like, N-terminal domain
IPR018944 : DNA polymerase lambda, fingers domain
IPR019843 : DNA polymerase family X, binding site
IPR022312 : DNA polymerase family X
IPR027421 : DNA polymerase family X lyase domain
IPR028207 : DNA polymerase beta, palm domain
IPR029398 : DNA polymerase beta, thumb domain
GO :
0003677 : Molecular Function : DNA binding
0003824 : Molecular Function : catalytic activity
0003887 : Molecular Function : DNA-directed DNA polymerase activity
0016779 : Molecular Function : nucleotidyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009072)
HIX0009072
HIT000195037
(
M26144
)
(Non-protein coding transcript.)
genome : 98,064,190 - 98,064,260 (71)
query : 1 - 70 (70/70)
1 exon
identity = 0.958
5'(0.958)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009072)
HIX0009072
HIT000036037
(
BC012920
)
(DNA nucleotidylexotransferase (TdT) / DNA-directed DNA/RNA polymerase mu family protein.)
genome : 98,064,212 - 98,098,320 (34,109)
query : 1 - 1,912 (1,912/1,944)
11 exons
identity = 0.999
5'(1.000;0.989;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001357 : BRCT domain
IPR001726 : DNA nucleotidylexotransferase (TdT) / DNA-directed DNA/RNA polymerase mu
IPR002054 : DNA-directed DNA polymerase X
IPR010996 : DNA polymerase beta-like, N-terminal domain
IPR018944 : DNA polymerase lambda, fingers domain
IPR019843 : DNA polymerase family X, binding site
IPR022312 : DNA polymerase family X
IPR027421 : DNA polymerase family X lyase domain
IPR028207 : DNA polymerase beta, palm domain
IPR029398 : DNA polymerase beta, thumb domain
GO :
0003677 : Molecular Function : DNA binding
0003824 : Molecular Function : catalytic activity
0003887 : Molecular Function : DNA-directed DNA polymerase activity
0016779 : Molecular Function : nucleotidyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009072)
HIX0009072
HIT000331097
(
AK223317
)
(DNA nucleotidylexotransferase (TdT) / DNA-directed DNA/RNA polymerase mu family protein.)
genome : 98,064,241 - 98,098,289 (34,049)
query : 1 - 1,852 (1,852/1,852)
11 exons
identity = 0.996
5'(0.995;0.989;1.000;1.000;1.000;1.000;0.985;
1.000;0.992;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001357 : BRCT domain
IPR001726 : DNA nucleotidylexotransferase (TdT) / DNA-directed DNA/RNA polymerase mu
IPR002054 : DNA-directed DNA polymerase X
IPR010996 : DNA polymerase beta-like, N-terminal domain
IPR018944 : DNA polymerase lambda, fingers domain
IPR019843 : DNA polymerase family X, binding site
IPR022312 : DNA polymerase family X
IPR027421 : DNA polymerase family X lyase domain
IPR028207 : DNA polymerase beta, palm domain
IPR029398 : DNA polymerase beta, thumb domain
GO :
0003677 : Molecular Function : DNA binding
0003824 : Molecular Function : catalytic activity
0003887 : Molecular Function : DNA-directed DNA polymerase activity
0016779 : Molecular Function : nucleotidyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009072)
HIX0009072
HIT000194742
(
M20694
)
(DNA nucleotidylexotransferase (TdT) / DNA-directed DNA/RNA polymerase mu family protein.)
genome : 98,078,099 - 98,078,294 (196)
query : 1 - 195 (195/195)
1 exon
identity = 0.985
5'(0.985)3'
coverage = 1.000
InterPro :
IPR001357 : BRCT domain
IPR001726 : DNA nucleotidylexotransferase (TdT) / DNA-directed DNA/RNA polymerase mu
GO :
0016779 : Molecular Function : nucleotidyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 11.5, nucl 9.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009072)
HIX0009072
HIT000194743
(
M20695
)
(DNA polymerase family X lyase domain containing protein.)
genome : 98,079,011 - 98,079,158 (148)
query : 3 - 149 (147/149)
1 exon
identity = 0.986
5'(0.986)3'
coverage = 0.987
InterPro :
IPR027421 : DNA polymerase family X lyase domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009072)
HIX0009072
HIT000050042
(
AK130771
)
(DNA nucleotidylexotransferase (TdT) / DNA-directed DNA/RNA polymerase mu family protein.)
genome : 98,079,115 - 98,098,319 (19,205)
query : 1 - 1,390 (1,390/1,390)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001726 : DNA nucleotidylexotransferase (TdT) / DNA-directed DNA/RNA polymerase mu
IPR002054 : DNA-directed DNA polymerase X
IPR010996 : DNA polymerase beta-like, N-terminal domain
IPR018944 : DNA polymerase lambda, fingers domain
IPR019843 : DNA polymerase family X, binding site
IPR022312 : DNA polymerase family X
IPR027421 : DNA polymerase family X lyase domain
IPR028207 : DNA polymerase beta, palm domain
IPR029398 : DNA polymerase beta, thumb domain
GO :
0003677 : Molecular Function : DNA binding
0003824 : Molecular Function : catalytic activity
0003887 : Molecular Function : DNA-directed DNA polymerase activity
0016779 : Molecular Function : nucleotidyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 16.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009072)
HIX0009072
HIT000194744
(
M20696
)
(DNA nucleotidylexotransferase (TdT) / DNA-directed DNA/RNA polymerase mu family protein.)
genome : 98,080,365 - 98,080,555 (191)
query : 1 - 191 (191/191)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR001726 : DNA nucleotidylexotransferase (TdT) / DNA-directed DNA/RNA polymerase mu
IPR010996 : DNA polymerase beta-like, N-terminal domain
IPR027421 : DNA polymerase family X lyase domain
GO :
0003677 : Molecular Function : DNA binding
0003824 : Molecular Function : catalytic activity
0016779 : Molecular Function : nucleotidyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 12.5, cyto_nucl 8, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009072)
HIX0009072
HIT000194745
(
M20697
)
(Non-protein coding transcript.)
genome : 98,082,404 - 98,082,495 (92)
query : 1 - 92 (92/92)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009072)
HIX0009072
HIT000194746
(
M20698
)
(DNA polymerase lambda, fingers domain containing protein.)
genome : 98,084,013 - 98,084,157 (145)
query : 1 - 144 (144/144)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 1.000
InterPro :
IPR018944 : DNA polymerase lambda, fingers domain
GO :
0016779 : Molecular Function : nucleotidyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, extr 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009072)
HIX0009072
HIT000191374
(
K01919
)
(DNA nucleotidylexotransferase (TdT) / DNA-directed DNA/RNA polymerase mu family protein.)
genome : 98,084,082 - 98,098,195 (14,114)
query : 1 - 931 (931/931)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR001726 : DNA nucleotidylexotransferase (TdT) / DNA-directed DNA/RNA polymerase mu
IPR002054 : DNA-directed DNA polymerase X
IPR018944 : DNA polymerase lambda, fingers domain
IPR019843 : DNA polymerase family X, binding site
IPR022312 : DNA polymerase family X
IPR028207 : DNA polymerase beta, palm domain
IPR029398 : DNA polymerase beta, thumb domain
GO :
0003677 : Molecular Function : DNA binding
0003887 : Molecular Function : DNA-directed DNA polymerase activity
0016779 : Molecular Function : nucleotidyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12.5, nucl 10.5, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009072)
HIX0009072
HIT000194747
(
M20699
)
(Conserved hypothetical protein.)
genome : 98,087,215 - 98,087,367 (153)
query : 1 - 153 (153/153)
1 exon
identity = 0.987
5'(0.987)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009072)
HIX0009072
HIT000194748
(
M20700
)
(Conserved hypothetical protein.)
genome : 98,088,473 - 98,088,597 (125)
query : 1 - 126 (126/126)
1 exon
identity = 0.992
5'(0.992)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009072)
HIX0009072
HIT000194749
(
M20701
)
(DNA nucleotidylexotransferase (TdT) / DNA-directed DNA/RNA polymerase mu family protein.)
genome : 98,092,098 - 98,092,351 (254)
query : 1 - 254 (254/269)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.944
InterPro :
IPR001726 : DNA nucleotidylexotransferase (TdT) / DNA-directed DNA/RNA polymerase mu
GO :
0016779 : Molecular Function : nucleotidyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009072)
HIX0009072
HIT000194750
(
M20702
)
(Non-protein coding transcript.)
genome : 98,095,638 - 98,095,740 (103)
query : 1 - 103 (103/104)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.990
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009072)
HIX0009072
HIT000194751
(
M20703
)
(Conserved hypothetical protein.)
genome : 98,097,886 - 98,098,195 (310)
query : 1 - 310 (310/310)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_mito 11.5, extr 9, mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009072)
HIX0009073
HIT000041930
(
BC033737
)
(Opalin; Oligodendrocytic myelin paranodal and inner loop protein; Transmembrane protein 10;)
genome : 98,102,978 - 98,118,739 (15,762)
query : 1 - 3,233 (3,233/3,289)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026609 : Opalin
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9.5, extr_plas 8.5, extr 6.5, cyto 6, nucl 3,
E.R. 3, cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009073)
HIX0009073
HIT000028959
(
AL834229
)
(Opalin; Oligodendrocytic myelin paranodal and inner loop protein; Transmembrane protein 10;)
genome : 98,102,976 - 98,118,739 (15,764)
query : 1 - 3,235 (3,235/3,253)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026609 : Opalin
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9.5, extr_plas 8.5, extr 6.5, cyto 6, nucl 3,
E.R. 3, cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009073)
HIX0009073
HIT000211209 (
NM_033207
)
(Opalin; Oligodendrocytic myelin paranodal and inner loop protein; Transmembrane protein 10;)
genome : 98,102,973 - 98,119,092 (16,120)
query : 1 - 3,590 (3,590/3,590)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9.5, extr_plas 8.5, extr 6.5, cyto 6, nucl 3,
E.R. 3, cyto_golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009073)
HIX0009073
HIT000366662 (
NM_001040102
)
(Opalin isoform b.)
genome : 98,102,973 - 98,119,092 (16,120)
query : 1 - 3,521 (3,521/3,521)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, E.R. 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009073)
HIX0009073
HIT000366663 (
NM_001040103
)
(Opalin; Oligodendrocytic myelin paranodal and inner loop protein; Transmembrane protein 10;)
genome : 98,102,973 - 98,119,092 (16,120)
query : 1 - 3,629 (3,629/3,629)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, plas 5, pero 5, lyso 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009073)
HIX0009073
HIT000477299 (
ENST00000393871
)
(Opalin isoform b.)
genome : 98,102,973 - 98,119,092 (16,120)
query : 1 - 3,521 (3,521/3,521)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009073)
HIX0009073
HIT000517413 (
ENST00000419479
)
(Opalin; Oligodendrocytic myelin paranodal and inner loop protein; Transmembrane protein 10;)
genome : 98,102,973 - 98,119,092 (16,120)
query : 1 - 3,629 (3,629/3,629)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, plas 5, pero 5, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009073)
HIX0009073
HIT000352452 (
ENST00000371172
)
(Opalin; Oligodendrocytic myelin paranodal and inner loop protein; Transmembrane protein 10;)
genome : 98,102,973 - 98,119,059 (16,087)
query : 1 - 3,557 (3,557/3,557)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9.5, extr_plas 8.5, extr 6.5, cyto 6, nucl 3,
E.R. 3, cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009073)
HIX0009073
HIT000078498
(
AF367761
)
Representative transcript
(Opalin; Oligodendrocytic myelin paranodal and inner loop protein; Transmembrane protein 10;)
genome : 98,102,979 - 98,119,059 (16,081)
query : 1 - 3,555 (3,555/3,555)
6 exons
identity = 0.998
3'(0.999;1.000;1.000;1.000;1.000;0.990)5'
coverage = 1.000
InterPro :
IPR026609 : Opalin
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9.5, extr_plas 8.5, extr 6.5, cyto 6, nucl 3,
E.R. 3, cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009073)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK140031
Rattus
sp. (Rat) : BC092200
Bos
sp. (Cow) : BC120118
Pongo
sp. (Orangutan) : CR861397
Equus
sp. (Horse) : ENSECAT00000016010
Monodelphis
sp. (Opossum) : ENSMODT00000040171
Macaca
sp. (Macaque) : XM_001093096
Pan
sp. (Chimpanzee) : XM_001159789
Canis
sp. (Dog) : XM_845718
HIX0009073
HIT000477298 (
ENST00000393870
)
(Opalin; Oligodendrocytic myelin paranodal and inner loop protein; Transmembrane protein 10;)
genome : 98,104,765 - 98,118,738 (13,974)
query : 1 - 1,411 (1,411/1,411)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, plas 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009073)
HIX0009073
HIT000491186
(
AK296562
)
(Opalin; Oligodendrocytic myelin paranodal and inner loop protein; Transmembrane protein 10;)
genome : 98,104,765 - 98,118,738 (13,974)
query : 1 - 1,411 (1,411/1,411)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026609 : Opalin
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, plas 6, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009073)
HIX0009073
HIT000090892
(
BC024191
)
(Opalin; Oligodendrocytic myelin paranodal and inner loop protein; Transmembrane protein 10;)
genome : 98,104,984 - 98,118,759 (13,776)
query : 6 - 1,249 (1,244/1,265)
6 exons
identity = 0.997
3'(1.000;1.000;0.983;1.000;1.000;0.982)5'
coverage = 0.995
InterPro :
IPR026609 : Opalin
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9.5, extr_plas 8.5, extr 6.5, cyto 6, nucl 3,
E.R. 3, cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009073)
HIX0009073
HIT000491086
(
AK296462
)
(Opalin isoform c.)
genome : 98,105,256 - 98,116,916 (11,661)
query : 1 - 1,047 (1,047/1,047)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026609 : Opalin
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, plas 5, pero 5, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009073)
HIX0009073
HIT000635432 (
ENST00000536387
)
(Opalin isoform c.)
genome : 98,105,256 - 98,116,916 (11,661)
query : 1 - 1,047 (1,047/1,047)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, plas 5, pero 5, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009073)
HIX0009073
HIT000427961
(
AK309095
)
(Opalin isoform b.)
genome : 98,105,322 - 98,118,756 (13,435)
query : 1 - 1,486 (1,486/1,486)
5 exons
identity = 0.997
3'(1.000;1.000;0.997;0.952;1.000)5'
coverage = 1.000
InterPro :
IPR026609 : Opalin
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, plas 8, cyto 2, nucl 1, E.R. 1, pero 1,
lyso 1, cyto_mito 1, cyto_golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009073)
HIX0009073
HIT000499703
(
AK316090
)
(Opalin; Oligodendrocytic myelin paranodal and inner loop protein; Transmembrane protein 10;)
genome : 98,105,324 - 98,118,731 (13,408)
query : 1 - 918 (918/918)
7 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;0.988)5'
coverage = 1.000
InterPro :
IPR026609 : Opalin
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, plas 5, pero 5, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009073)
HIX0009073
HIT000422632
(
AK289835
)
(Opalin; Oligodendrocytic myelin paranodal and inner loop protein; Transmembrane protein 10;)
genome : 98,105,676 - 98,118,765 (13,090)
query : 2 - 561 (560/561)
6 exons
identity = 0.998
3'(1.000;1.000;1.000;0.970;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR026609 : Opalin
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9.5, extr_plas 8.5, extr 6.5, cyto 6, nucl 3,
E.R. 3, cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009073)
HIX0009073
HIT000430126
(
AK311260
)
(Conserved hypothetical protein.)
genome : 98,110,245 - 98,118,694 (8,450)
query : 1 - 1,004 (1,004/1,004)
3 exons
identity = 0.997
3'(0.997;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009073)
HIX0009074
HIT000204195 (
NM_012465
)
(Tolloid-like protein 2; EC=3.4.24.-; Precursor;)
genome : 98,124,363 - 98,273,683 (149,321)
query : 1 - 6,771 (6,771/6,788)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 3, E.R. 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009074)
HIX0009074
HIT000311726 (
ENST00000357947
)
(Tolloid-like protein 2; EC=3.4.24.-; Precursor;)
genome : 98,124,363 - 98,273,668 (149,306)
query : 1 - 6,756 (6,756/6,756)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 3, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009074)
HIX0009074
HIT000000649
(
AB023149
)
(Tolloid-like protein 2; EC=3.4.24.-; Precursor;)
genome : 98,124,366 - 98,273,633 (149,268)
query : 1 - 6,717 (6,717/6,717)
21 exons
identity = 0.999
3'(0.999;1.000;0.995;1.000;1.000;1.000;1.000;
1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 3, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009074)
HIX0009074
HIT000340461
(
BC112341
)
Representative transcript
(Tolloid-like protein 2; EC=3.4.24.-; Precursor;)
genome : 98,125,943 - 98,273,566 (147,624)
query : 1 - 5,074 (5,074/5,074)
21 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR000859 : CUB domain
IPR001506 : Peptidase M12A, astacin
IPR001881 : EGF-like calcium-binding domain
IPR006026 : Peptidase, metallopeptidase
IPR013032 : EGF-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 3, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009074)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : AF027596
Mus
sp. (Mouse) : AF073526
Gallus
sp. (Chicken) : CR406193
Equus
sp. (Horse) : ENSECAT00000015970
Macaca
sp. (Macaque) : ENSMMUT00000022234
Oryzias
sp. (Medaka) : ENSORLT00000010048
Pongo
sp. (Orangutan) : ENSPPYT00000003027
Tetraodon
sp. (Tetraodon) : GSTENT00013718001
Takifugu
sp. (Fugu) : SINFRUT00000160396
Rattus
sp. (Rat) : XM_001054070
Monodelphis
sp. (Opossum) : XM_001374337
Pan
sp. (Chimpanzee) : XM_507953
Canis
sp. (Dog) : XM_543945
Bos
sp. (Cow) : XM_864694
HIX0009074
HIT000340484
(
BC112366
)
(Tolloid-like protein 2; EC=3.4.24.-; Precursor;)
genome : 98,125,943 - 98,273,566 (147,624)
query : 1 - 5,074 (5,074/5,074)
21 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.991;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR000859 : CUB domain
IPR001506 : Peptidase M12A, astacin
IPR001881 : EGF-like calcium-binding domain
IPR006026 : Peptidase, metallopeptidase
IPR013032 : EGF-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 3, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009074)
HIX0009074
HIT000064838
(
AF059516
)
(Tolloid-like protein 2; EC=3.4.24.-; Precursor;)
genome : 98,126,252 - 98,273,668 (147,417)
query : 139 - 5,007 (4,869/5,021)
21 exons
identity = 0.995
3'(0.990;1.000;1.000;1.000;1.000;0.994;1.000;
0.992;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.998)5'
coverage = 0.972
EC number :
EC 3.4.24.-
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR000859 : CUB domain
IPR001506 : Peptidase M12A, astacin
IPR001881 : EGF-like calcium-binding domain
IPR006026 : Peptidase, metallopeptidase
IPR013032 : EGF-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 3, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009074)
HIX0009074
HIT000387030
(
BC113577
)
(Tolloid-like protein 2; EC=3.4.24.-; Precursor;)
genome : 98,127,755 - 98,273,499 (145,745)
query : 1 - 3,195 (3,195/3,195)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR000859 : CUB domain
IPR001506 : Peptidase M12A, astacin
IPR001881 : EGF-like calcium-binding domain
IPR006026 : Peptidase, metallopeptidase
IPR013032 : EGF-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 3, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009074)
HIX0009074
HIT000606118 (
ENST00000506028
)
(Conserved hypothetical protein.)
genome : 98,133,458 - 98,135,109 (1,652)
query : 1 - 915 (915/915)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 7, cyto_nucl 3.66667, cyto 3.5,
cyto_pero 3.33333, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009074)
HIX0009074
HIT000018535
(
AK093668
)
(Hypothetical protein.)
genome : 98,134,351 - 98,136,449 (2,099)
query : 1 - 2,099 (2,099/2,099)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, extr 6, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009074)
HIX0009074
HIT000092143
(
BC030548
)
(Tolloid-like protein 1 isoform 2 precursor.)
genome : 98,154,947 - 98,273,667 (118,721)
query : 1 - 1,946 (1,946/2,041)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.983;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
InterPro :
IPR000859 : CUB domain
IPR001506 : Peptidase M12A, astacin
IPR006026 : Peptidase, metallopeptidase
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, E.R. 9.5, E.R._golg 7.5, golg 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009074)
HIX0009074
HIT000088216
(
BC013871
)
(Tolloid-like protein 1 isoform 2 precursor.)
genome : 98,154,941 - 98,273,643 (118,703)
query : 1 - 1,930 (1,930/1,980)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
InterPro :
IPR000859 : CUB domain
IPR001506 : Peptidase M12A, astacin
IPR006026 : Peptidase, metallopeptidase
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, E.R. 9, E.R._golg 8, golg 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009074)
HIX0009074
HIT000009380
(
AK026106
)
(Tolloid-like protein 1 isoform 2 precursor.)
genome : 98,154,950 - 98,273,675 (118,726)
query : 1 - 1,887 (1,887/1,907)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 3.4.24.-
InterPro :
IPR000859 : CUB domain
IPR001506 : Peptidase M12A, astacin
IPR006026 : Peptidase, metallopeptidase
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009074)
HIX0009074
HIT000574114 (
ENST00000469598
)
(Tolloid-like protein 1 isoform 2 precursor.)
genome : 98,154,950 - 98,273,675 (118,726)
query : 1 - 1,887 (1,887/1,887)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009074)
HIX0115029
pHIT000017958 ( pHIT000017958 )
Representative transcript
(Hypothetical short protein.)
genome : 98,247,972 - 98,248,163 (192)
query : 1 - 192 (192/192)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0115029)
CAGE tag :
H05BE92G1806
HIX0219073
HIT000721376
(
JQ313908
)
Representative transcript
(Hypothetical protein.)
genome : 98,280,433 - 98,280,747 (315)
query : 1 - 315 (315/315)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 7, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219073)
HIX0035480
HIT000070485
(
AF124819
)
Representative transcript
(Hypothetical short protein.)
genome : 98,280,742 - 98,281,484 (743)
query : 1 - 742 (742/753)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 6, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035480)
HIX0218919
HIT000492345
(
AK297721
)
Representative transcript
(Nonaspanin (TM9SF) family protein.)
genome : 98,281,922 - 98,319,442 (37,521)
query : 1 - 1,038 (1,038/1,038)
10 exons
identity = 0.988
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.918;1.000)5'
coverage = 1.000
InterPro :
IPR004240 : Nonaspanin (TM9SF)
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218919)
HIX0218919
HIT000588916 (
ENST00000485093
)
(Nonaspanin (TM9SF) family protein.)
genome : 98,282,034 - 98,287,930 (5,897)
query : 1 - 407 (407/407)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218919)
HIX0218919
HIT000593761 (
ENST00000490192
)
(Nonaspanin (TM9SF) family protein.)
genome : 98,303,358 - 98,311,174 (7,817)
query : 12 - 884 (873/884)
3 exons
identity = 0.999
3'(1.000;1.000;0.994)5'
coverage = 0.988
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218919)
HIX0170794
HIT000524273 (
ENST00000426339
)
(Nucleoplasmin core domain containing protein.)
genome : 98,319,942 - 98,320,679 (738)
query : 1 - 738 (738/738)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, extr 5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170794)
HIX0219023
HIT000579643 (
ENST00000475401
)
(Nonaspanin (TM9SF) family protein.)
genome : 98,336,102 - 98,346,516 (10,415)
query : 1 - 511 (511/511)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 12, nucl 7, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219023)
HIX0201490
HIT000057197
(
BX648550
)
Representative transcript
(Phosphoinositide 3-kinase adapter protein 1; B-cell adapter for phosphoinositide 3-kinase; B-cell phosphoinositide 3-kinase adapter protein 1;)
genome : 98,353,074 - 98,480,175 (127,102)
query : 1 - 4,702 (4,702/4,724)
17 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000;1.000;0.995;1.000;
0.980;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998;1.000)5'
coverage = 1.000
InterPro :
IPR017893 : DBB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_pero 8.5, plas 5.5, pero 5.5, nucl 4,
extr_plas 4, E.R. 2, extr 1.5, E.R._mito 1.5, E.R._golg 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201490)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AF293805
Mus
sp. (Mouse) : AK171021
Bos
sp. (Cow) : ENSBTAT00000026477
Oryzias
sp. (Medaka) : ENSORLT00000017706
Pongo
sp. (Orangutan) : ENSPPYT00000003029
Tetraodon
sp. (Tetraodon) : GSTENT00024529001
Takifugu
sp. (Fugu) : SINFRUT00000162024
Macaca
sp. (Macaque) : XM_001101530
Danio
sp. (Zebrafish) : XM_001342048
Monodelphis
sp. (Opossum) : XM_001374231
Equus
sp. (Horse) : XM_001500468
Pan
sp. (Chimpanzee) : XM_507955
Canis
sp. (Dog) : XM_845744
HIX0201490
HIT000213580 (
NM_152309
)
(Phosphoinositide 3-kinase adapter protein 1; B-cell adapter for phosphoinositide 3-kinase; B-cell phosphoinositide 3-kinase adapter protein 1;)
genome : 98,353,069 - 98,480,279 (127,211)
query : 1 - 4,811 (4,811/4,817)
17 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.980;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_pero 8.5, plas 5.5, pero 5.5,
extr_plas 4, nucl 3, E.R. 3, extr 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201490)
HIX0201490
HIT000131994 (
ENST00000339364
)
(Phosphoinositide 3-kinase adapter protein 1; B-cell adapter for phosphoinositide 3-kinase; B-cell phosphoinositide 3-kinase adapter protein 1;)
genome : 98,353,069 - 98,480,271 (127,203)
query : 1 - 4,803 (4,803/4,803)
17 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.980;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_pero 8.5, plas 5.5, pero 5.5,
extr_plas 4, nucl 3, E.R. 3, extr 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201490)
HIX0201490
HIT000042457
(
AK122584
)
(Phosphoinositide 3-kinase adapter protein 1.)
genome : 98,353,071 - 98,383,006 (29,936)
query : 1 - 5,637 (5,637/5,637)
6 exons
identity = 0.997
3'(0.997;1.000;1.000;0.994;1.000;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201490)
HIX0201490
HIT000045508
(
AK125635
)
(Phosphoinositide 3-kinase adapter protein 1; B-cell adapter for phosphoinositide 3-kinase; B-cell phosphoinositide 3-kinase adapter protein 1;)
genome : 98,354,252 - 98,480,271 (126,020)
query : 1 - 3,620 (3,620/3,620)
17 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;0.995;1.000;
0.975;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998;1.000)5'
coverage = 1.000
InterPro :
IPR017893 : DBB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_pero 8.83333, pero 6, plas 5.5,
mito_pero 4.33333, extr_plas 4, nucl 3, E.R. 2, extr 1.5, mito 1.5,
E.R._golg 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201490)
HIX0201490
HIT000017750
(
AK092883
)
(Phosphoinositide 3-kinase adapter protein 1.)
genome : 98,354,252 - 98,429,368 (75,117)
query : 1 - 3,151 (3,151/3,151)
16 exons
identity = 0.997
3'(0.998;1.000;0.986;1.000;1.000;1.000;1.000;
0.975;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR017893 : DBB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201490)
HIX0201490
HIT000352390 (
ENST00000371110
)
(Phosphoinositide 3-kinase adapter protein 1.)
genome : 98,354,252 - 98,429,368 (75,117)
query : 1 - 3,151 (3,151/3,151)
16 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.980;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201490)
HIX0201490
HIT000040921
(
BC029917
)
(Phosphoinositide 3-kinase adapter protein 1.)
genome : 98,354,965 - 98,392,998 (38,034)
query : 1 - 1,766 (1,766/1,807)
10 exons
identity = 0.996
3'(1.000;1.000;1.000;0.994;1.000;1.000;1.000;
0.975;1.000;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 9, nucl 5.5, cyto_nucl 4, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201490)
HIX0201490
HIT000352389 (
ENST00000371109
)
(Phosphoinositide 3-kinase adapter protein 1.)
genome : 98,354,965 - 98,392,998 (38,034)
query : 1 - 1,766 (1,766/1,766)
10 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.980;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 9, nucl 5.5, cyto_nucl 4, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201490)
HIX0201490
HIT000572228 (
ENST00000467625
)
(Phosphoinositide 3-kinase adapter protein 1.)
genome : 98,355,322 - 98,378,545 (23,224)
query : 1 - 627 (627/627)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 7, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201490)
HIX0201490
HIT000593561 (
ENST00000489982
)
(Phosphoinositide 3-kinase adapter protein 1.)
genome : 98,363,497 - 98,380,168 (16,672)
query : 1 - 599 (599/599)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 14.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201490)
HIX0201490
HIT000554450 (
ENST00000456516
)
(Conserved hypothetical protein.)
genome : 98,380,634 - 98,381,464 (831)
query : 1 - 831 (831/831)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, cyto_nucl 10.6667, mito 9, mito_nucl 8.16667,
nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201490)
HIX0201490
HIT000573334 (
ENST00000468783
)
(Phosphoinositide 3-kinase adapter protein 1.)
genome : 98,388,155 - 98,460,635 (72,481)
query : 1 - 1,117 (1,117/1,117)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, cyto 8, mito 3, pero 3,
mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201490)
HIX0153302
HIT000464710
(
DQ598179
)
Representative transcript
(Non-protein coding transcript.)
genome : 98,452,480 - 98,452,508 (29)
query : 2 - 30 (29/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0153302)
HIX0190524
HIT000562909 (
NR_026712
)
(Ribosomal protein L13 family protein.)
genome : 98,510,023 - 98,510,680 (658)
query : 1 - 658 (658/658)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, nucl 5.5, mito 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190524)
HIX0190524
HIT000110598 (
ENST00000270634
)
(Ribosomal protein L13 family protein.)
genome : 98,510,045 - 98,510,675 (631)
query : 1 - 438 (438/438)
2 exons
identity = 0.982
5'(1.000;0.930)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13.5, mito 3.5, nucl 2.5,
E.R._mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190524)
HIX0190524
HIT000537123 (
ENST00000439189
)
(Ribosomal protein L13 family protein.)
genome : 98,510,045 - 98,510,656 (612)
query : 1 - 612 (612/612)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, nucl 5.5, mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190524)
HIX0190524
HIT000587993_03 (
ENST00000484130
)
(Ribosomal protein L13 family protein.)
genome : 98,510,045 - 98,510,656 (612)
query : 1 - 612 (612/612)
1 exon
identity = 0.975
5'(0.975)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13.5, nucl 12.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190524)
HIX0190524
HIT000564684_03 (
ENST00000459725
)
(Ribosomal protein L13 family protein.)
genome : 98,510,045 - 98,510,653 (609)
query : 1 - 609 (609/609)
1 exon
identity = 0.969
5'(0.969)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 11.5, extr 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190524)
HIX0190524
HIT000598983_03 (
ENST00000495623
)
(Ribosomal protein L13 family protein.)
genome : 98,510,047 - 98,510,653 (607)
query : 1 - 606 (606/606)
1 exon
identity = 0.970
5'(0.970)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, mito 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190524)
HIX0190524
HIT000572423_01 (
ENST00000467825
)
(Ribosomal protein L13 family protein.)
genome : 98,510,057 - 98,510,680 (624)
query : 1 - 648 (648/652)
1 exon
identity = 0.958
5'(0.958)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, nucl 8, mito 7.5, E.R._mito 6, E.R. 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190524)
HIX0209398
HIT000444657_04
(
DQ578126
)
Representative transcript
(Non-protein coding transcript.)
genome : 98,510,162 - 98,510,191 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209398)
HIX0209421
HIT000563981
(
AB593180
)
Representative transcript
(Non-protein coding transcript.)
genome : 98,591,562 - 98,592,215 (654)
query : 1 - 654 (654/654)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209421)
HIX0009079
HIT000654689 (
NM_001170765
)
(Ligand-dependent corepressor; LCoR; Mblk1-related protein 2;)
genome : 98,592,017 - 98,724,198 (132,182)
query : 1 - 10,364 (10,364/10,370)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 15, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009079)
HIX0009079
HIT000654690 (
NM_001170766
)
(Ligand-dependent corepressor isoform 2.)
genome : 98,592,017 - 98,724,198 (132,182)
query : 1 - 7,787 (7,787/7,793)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 15, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009079)
HIX0009079
HIT000639709 (
ENST00000540664
)
(Ligand-dependent corepressor isoform 2.)
genome : 98,592,017 - 98,724,188 (132,172)
query : 1 - 7,777 (7,777/7,777)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 15, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009079)
HIX0009079
HIT000027018
(
AL832106
)
(Ligand-dependent corepressor; LCoR; Mblk1-related protein 2;)
genome : 98,592,039 - 98,718,662 (126,624)
query : 3 - 4,809 (4,807/4,839)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.997;1.000;
1.000)3'
coverage = 0.999
InterPro :
IPR007889 : DNA binding HTH domain, Psq-type
GO :
0003677 : Molecular Function : DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 14.5, cyto 3, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009079)
HIX0009079
HIT000352383 (
ENST00000371103
)
(Ligand-dependent corepressor; LCoR; Mblk1-related protein 2;)
genome : 98,592,039 - 98,718,664 (126,626)
query : 1 - 4,808 (4,808/4,834)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 15, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009079)
HIX0009079
HIT000053884
(
BC053359
)
(Ligand-dependent corepressor isoform 2.)
genome : 98,592,076 - 98,718,664 (126,589)
query : 1 - 2,194 (2,194/2,213)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007889 : DNA binding HTH domain, Psq-type
GO :
0003677 : Molecular Function : DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 15, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009079)
HIX0009079
HIT000317651 (
NM_032440
)
(Ligand-dependent corepressor; LCoR; Mblk1-related protein 2;)
genome : 98,592,712 - 98,724,198 (131,487)
query : 1 - 10,384 (10,384/10,390)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 15, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009079)
HIX0009079
HIT000352377 (
ENST00000371097
)
(Ligand-dependent corepressor; LCoR; Mblk1-related protein 2;)
genome : 98,592,714 - 98,724,198 (131,485)
query : 1 - 10,390 (10,390/10,390)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 15, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009079)
HIX0009079
HIT000028975
(
AL834245
)
(Ligand-dependent corepressor; LCoR; Mblk1-related protein 2;)
genome : 98,592,737 - 98,718,665 (125,929)
query : 1 - 4,834 (4,834/4,852)
8 exons
identity = 0.999
5'(0.993;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 1.000
InterPro :
IPR007889 : DNA binding HTH domain, Psq-type
GO :
0003677 : Molecular Function : DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 15, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009079)
HIX0009079
HIT000001510
(
AB058698
)
Representative transcript
(Ligand-dependent corepressor; LCoR; Mblk1-related protein 2;)
genome : 98,592,799 - 98,718,648 (125,850)
query : 1 - 4,747 (4,747/4,747)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 15, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009079)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AB076079
Danio
sp. (Zebrafish) : BC127573
Oryzias
sp. (Medaka) : ENSORLT00000009782
Pan
sp. (Chimpanzee) : ENSPTRT00000005298
Tetraodon
sp. (Tetraodon) : GSTENT00005551001
Takifugu
sp. (Fugu) : SINFRUT00000146513
Takifugu
sp. (Fugu) : SINFRUT00000148866
Rattus
sp. (Rat) : XM_001054322
Macaca
sp. (Macaque) : XM_001093998
Monodelphis
sp. (Opossum) : XM_001374194
Equus
sp. (Horse) : XM_001500431
Gallus
sp. (Chicken) : XM_421716
Canis
sp. (Dog) : XM_543946
Bos
sp. (Cow) : XM_584325
HIX0009079
HIT000310081 (
ENST00000356016
)
(Ligand-dependent corepressor; LCoR; Mblk1-related protein 2;)
genome : 98,592,799 - 98,718,648 (125,850)
query : 1 - 4,747 (4,747/4,747)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 15, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009079)
HIX0009079
HIT000596922 (
ENST00000493486
)
(Ligand-dependent corepressor isoform 2.)
genome : 98,667,042 - 98,708,883 (41,842)
query : 1 - 245 (245/245)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 13.5, extr 9, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009079)
HIX0009079
HIT000574030 (
ENST00000469510
)
(Ligand-dependent nuclear receptor corepressor-like protein; LCoR-like protein; Mblk1-related protein 1; Transcription factor MLR1;)
genome : 98,667,043 - 98,667,847 (805)
query : 1 - 468 (468/468)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 9, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009079)
HIX0170602
HIT000510098 (
ENST00000412164
)
(Conserved hypothetical protein.)
genome : 98,675,390 - 98,675,659 (270)
query : 1 - 270 (270/270)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 6, cyto 5, lyso 3, extr_plas 3,
cyto_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170602)
HIX0170569
HIT000506630 (
ENST00000408538
)
(Non-protein coding transcript.)
genome : 98,680,459 - 98,680,548 (90)
query : 1 - 90 (90/90)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170569)
HIX0035320
HIT000070049
(
AF116714
)
Representative transcript
(Hypothetical short protein.)
genome : 98,685,145 - 98,686,428 (1,284)
query : 1 - 1,284 (1,284/1,297)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035320)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000003032
Pan
sp. (Chimpanzee) : ENSPTRT00000046578
HIX0009079
HIT000389906
(
BC128542
)
(Ligand-dependent corepressor isoform 2.)
genome : 98,708,872 - 98,715,229 (6,358)
query : 3 - 799 (797/806)
3 exons
identity = 0.995
5'(0.978;1.000;1.000)3'
coverage = 0.989
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 7, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009079)
HIX0009079
HIT000601666 (
ENST00000498444
)
(Ligand-dependent corepressor isoform 2.)
genome : 98,708,899 - 98,740,800 (31,902)
query : 1 - 499 (499/499)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 3, mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009079)
HIX0009079
HIT000568210 (
ENST00000463415
)
(Ligand-dependent corepressor isoform 2.)
genome : 98,708,980 - 98,718,272 (9,293)
query : 1 - 271 (271/271)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 12, cyto_nucl 10.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009079)
HIX0009079
HIT000026956
(
AL832044
)
(Ligand-dependent corepressor isoform 1.)
genome : 98,715,076 - 98,718,650 (3,575)
query : 1 - 3,574 (3,574/3,600)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.999
InterPro :
IPR007889 : DNA binding HTH domain, Psq-type
GO :
0003677 : Molecular Function : DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009079)
HIX0009079
HIT000020200
(
AK095345
)
(Ligand-dependent corepressor isoform 1.)
genome : 98,715,473 - 98,718,663 (3,191)
query : 1 - 3,193 (3,193/3,193)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR007889 : DNA binding HTH domain, Psq-type
GO :
0003677 : Molecular Function : DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, extr 5, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009079)
HIX0009079
HIT000006522
(
AK023248
)
(Hypothetical protein.)
genome : 98,716,395 - 98,718,663 (2,269)
query : 1 - 2,268 (2,268/2,268)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, nucl 10, cyto 8, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009079)
HIX0009079
HIT000328412
(
AB072899
)
(Hypothetical short protein.)
genome : 98,721,662 - 98,724,198 (2,537)
query : 1 - 2,537 (2,537/2,543)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009079)
HIX0170441
HIT000046759
(
AK126886
)
(Uncharacterized protein C10orf12;)
genome : 98,740,988 - 98,744,633 (3,646)
query : 1 - 3,646 (3,646/3,646)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR028104 : Protein of unknown function DUF4553
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 16, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170441)
HIX0170441
HIT000050888
(
BC024315
)
Representative transcript
(Uncharacterized protein C10orf12;)
genome : 98,741,041 - 98,745,585 (4,545)
query : 1 - 4,545 (4,545/4,565)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR028104 : Protein of unknown function DUF4553
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 16, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170441)
HIX0170441
HIT000205593 (
NM_015652
)
(Uncharacterized protein C10orf12;)
genome : 98,741,041 - 98,745,585 (4,545)
query : 1 - 4,545 (4,545/4,565)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 16, cyto 12.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170441)
HIX0170441
HIT000112676 (
ENST00000286067
)
(Uncharacterized protein C10orf12;)
genome : 98,741,041 - 98,745,582 (4,542)
query : 1 - 4,542 (4,542/4,542)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 16, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170441)
HIX0170441
HIT000092391
(
BC031482
)
(Uncharacterized protein C10orf12;)
genome : 98,741,644 - 98,744,598 (2,955)
query : 1 - 2,955 (2,955/2,969)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR028104 : Protein of unknown function DUF4553
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 19, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170441)
HIX0170441
HIT000006358
(
AK023084
)
(Uncharacterized protein C10orf12;)
genome : 98,741,852 - 98,745,580 (3,729)
query : 1 - 3,729 (3,729/3,729)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR028104 : Protein of unknown function DUF4553
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, extr 3, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170441)
HIX0170441
HIT000023845
(
AL049938
)
(Uncharacterized protein C10orf12;)
genome : 98,744,220 - 98,745,487 (1,268)
query : 1 - 1,268 (1,268/1,438)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR028104 : Protein of unknown function DUF4553
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 17.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170441)
HIX0009081
HIT000519740 (
ENST00000421806
)
(Hypothetical protein.)
genome : 98,752,207 - 98,755,716 (3,510)
query : 1 - 3,510 (3,510/3,510)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009081)
HIX0009081
HIT000008440
(
AK025166
)
Representative transcript
(Hypothetical protein.)
genome : 98,753,748 - 98,755,712 (1,965)
query : 1 - 1,965 (1,965/1,988)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009081)
HIX0079168
HIT000199928 (
NM_003061
)
(Slit homolog 1 protein; Slit-1; Multiple epidermal growth factor-like domains protein 4; Multiple EGF-like domains protein 4; Precursor;)
genome : 98,757,795 - 98,945,683 (187,889)
query : 1 - 7,931 (7,931/7,949)
37 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 3, E.R. 3, lyso 3, E.R._mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079168)
HIX0079168
HIT000435553
(
BC146761
)
(Slit homolog 1 protein; Slit-1; Multiple epidermal growth factor-like domains protein 4; Multiple EGF-like domains protein 4; Precursor;)
genome : 98,757,795 - 98,945,683 (187,889)
query : 1 - 7,931 (7,931/7,949)
37 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.986;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000372 : Leucine-rich repeat-containing N-terminal
IPR000483 : Cysteine-rich flanking region, C-terminal
IPR000742 : Epidermal growth factor-like domain
IPR001611 : Leucine-rich repeat
IPR001791 : Laminin G domain
IPR001881 : EGF-like calcium-binding domain
IPR003591 : Leucine-rich repeat, typical subtype
IPR003645 : Follistatin-like, N-terminal
IPR006207 : Cystine knot, C-terminal
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR013032 : EGF-like, conserved site
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR018097 : EGF-like calcium-binding, conserved site
IPR025875 : Leucine rich repeat 4
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 3, E.R. 3, lyso 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079168)
HIX0079168
HIT000000330
(
AB011537
)
(Slit homolog 1 protein; Slit-1; Multiple epidermal growth factor-like domains protein 4; Multiple EGF-like domains protein 4; Precursor;)
genome : 98,757,795 - 98,945,683 (187,889)
query : 1 - 7,931 (7,931/7,931)
37 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.986;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 3, E.R. 3, lyso 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079168)
HIX0079168
HIT000109946 (
ENST00000266058
)
(Slit homolog 1 protein; Slit-1; Multiple epidermal growth factor-like domains protein 4; Multiple EGF-like domains protein 4; Precursor;)
genome : 98,757,795 - 98,945,677 (187,883)
query : 1 - 7,925 (7,925/7,925)
37 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 3, E.R. 3, lyso 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079168)
HIX0079168
HIT000598350 (
ENST00000494968
)
(Hypothetical short protein.)
genome : 98,757,877 - 98,758,563 (687)
query : 1 - 470 (470/470)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079168)
HIX0079168
HIT000058508
(
AB017167
)
(Slit homolog 1 protein; Slit-1; Multiple epidermal growth factor-like domains protein 4; Multiple EGF-like domains protein 4; Precursor;)
genome : 98,760,611 - 98,945,663 (185,053)
query : 1 - 5,094 (5,094/5,094)
37 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.990;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.986;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000372 : Leucine-rich repeat-containing N-terminal
IPR000483 : Cysteine-rich flanking region, C-terminal
IPR000742 : Epidermal growth factor-like domain
IPR001611 : Leucine-rich repeat
IPR001791 : Laminin G domain
IPR001881 : EGF-like calcium-binding domain
IPR003591 : Leucine-rich repeat, typical subtype
IPR003645 : Follistatin-like, N-terminal
IPR006207 : Cystine knot, C-terminal
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR013032 : EGF-like, conserved site
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR018097 : EGF-like calcium-binding, conserved site
IPR025875 : Leucine rich repeat 4
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 3, E.R. 3, lyso 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079168)
HIX0079168
HIT000503108
(
BC146851
)
Representative transcript
(Slit homolog 1 protein; Slit-1; Multiple epidermal growth factor-like domains protein 4; Multiple EGF-like domains protein 4; Precursor;)
genome : 98,760,761 - 98,945,596 (184,836)
query : 1 - 4,878 (4,878/4,878)
37 exons
identity = 1.000
3'(1.000;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000372 : Leucine-rich repeat-containing N-terminal
IPR000483 : Cysteine-rich flanking region, C-terminal
IPR000742 : Epidermal growth factor-like domain
IPR001611 : Leucine-rich repeat
IPR001791 : Laminin G domain
IPR001881 : EGF-like calcium-binding domain
IPR003591 : Leucine-rich repeat, typical subtype
IPR003645 : Follistatin-like, N-terminal
IPR006207 : Cystine knot, C-terminal
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR013032 : EGF-like, conserved site
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR018097 : EGF-like calcium-binding, conserved site
IPR025875 : Leucine rich repeat 4
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 3, E.R. 3, lyso 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079168)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF133730
Mus
sp. (Mouse) : AF144627
Gallus
sp. (Chicken) : AF364044
Macaca
sp. (Macaque) : AY650311
Danio
sp. (Zebrafish) : DQ177286
Canis
sp. (Dog) : ENSCAFT00000014303
Danio
sp. (Zebrafish) : ENSDART00000041466
Monodelphis
sp. (Opossum) : ENSMODT00000005664
Oryzias
sp. (Medaka) : ENSORLT00000000072
Oryzias
sp. (Medaka) : ENSORLT00000009943
Pongo
sp. (Orangutan) : ENSPPYT00000003033
Pan
sp. (Chimpanzee) : ENSPTRT00000050665
Tetraodon
sp. (Tetraodon) : GSTENT00005588001
Tetraodon
sp. (Tetraodon) : GSTENT00010079001
Takifugu
sp. (Fugu) : SINFRUT00000146494
Takifugu
sp. (Fugu) : SINFRUT00000178864
Equus
sp. (Horse) : XM_001917112
Bos
sp. (Cow) : XM_587954
HIX0079168
HIT000352350 (
ENST00000371070
)
(Slit homolog 1 protein precursor.)
genome : 98,760,870 - 98,945,515 (184,646)
query : 1 - 4,564 (4,564/4,564)
37 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 3, E.R. 3, cyto_nucl 3, lyso 3,
E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079168)
HIX0079168
HIT000083321
(
AY029183
)
(Slit homolog 1 protein precursor.)
genome : 98,791,388 - 98,945,380 (153,993)
query : 1 - 2,392 (2,392/2,395)
23 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994;1.000;1.000;0.990;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000372 : Leucine-rich repeat-containing N-terminal
IPR000483 : Cysteine-rich flanking region, C-terminal
IPR001611 : Leucine-rich repeat
IPR003591 : Leucine-rich repeat, typical subtype
IPR025875 : Leucine rich repeat 4
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 6, E.R. 6, E.R._mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079168)
HIX0079168
HIT000120316 (
ENST00000314867
)
(Slit homolog 1 protein precursor.)
genome : 98,797,455 - 98,945,380 (147,926)
query : 1 - 2,345 (2,345/2,345)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 7, E.R. 6, lyso 3, E.R._golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079168)
HIX0079168
HIT000091490
(
BC028105
)
(Slit homolog 2 protein; Slit-2; Contains: Slit homolog 2 protein N-product; Contains: Slit homolog 2 protein C-product; Precursor;)
genome : 98,817,500 - 98,945,677 (128,178)
query : 1 - 1,694 (1,694/1,729)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000372 : Leucine-rich repeat-containing N-terminal
IPR000483 : Cysteine-rich flanking region, C-terminal
IPR001611 : Leucine-rich repeat
IPR003591 : Leucine-rich repeat, typical subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 4, nucl 3, E.R. 3, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079168)
HIX0079168
HIT000352321 (
ENST00000371041
)
(Slit homolog 2 protein; Slit-2; Contains: Slit homolog 2 protein N-product; Contains: Slit homolog 2 protein C-product; Precursor;)
genome : 98,817,499 - 98,945,677 (128,179)
query : 1 - 1,695 (1,695/1,695)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 4, nucl 3, E.R. 3, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079168)
HIX0079168
HIT000600975 (
ENST00000497714
)
(Conserved hypothetical protein.)
genome : 98,825,270 - 98,862,313 (37,044)
query : 1 - 500 (500/500)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079168)
HIX0170440
HIT000045311
(
AK125438
)
Representative transcript
(Conserved hypothetical protein.)
genome : 98,825,270 - 98,829,221 (3,952)
query : 1 - 3,948 (3,948/3,949)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 15.5, cyto 8, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170440)
HIX0035553
HIT000039127
(
BC021189
)
Representative transcript
(Hypothetical protein.)
genome : 98,862,513 - 98,863,490 (978)
query : 1 - 675 (675/690)
3 exons
identity = 0.997
5'(0.997;1.000;0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 6.5, nucl 5.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035553)
HIX0035553
HIT000522362 (
ENST00000424428
)
(Hypothetical protein.)
genome : 98,862,513 - 98,863,504 (992)
query : 1 - 689 (689/689)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 3, mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035553)
HIX0035553
HIT000660266 (
NR_038330
)
(Hypothetical protein.)
genome : 98,862,513 - 98,863,504 (992)
query : 1 - 689 (689/689)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 3, mito 3, mito_nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035553)
HIX0009084
HIT000022773
(
AK097919
)
Representative transcript
(Hypothetical protein.)
genome : 98,912,802 - 98,915,190 (2,389)
query : 1 - 2,389 (2,389/2,389)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009084)
HIX0009084
HIT000579535 (
ENST00000475285
)
(Hypothetical protein.)
genome : 98,912,802 - 98,915,190 (2,389)
query : 1 - 2,389 (2,389/2,389)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009084)
HIX0079168
HIT000553942 (
ENST00000456008
)
(Slit homolog 1 protein precursor.)
genome : 98,917,091 - 98,945,610 (28,520)
query : 1 - 948 (948/948)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 4, nucl 2.5, cyto_nucl 2.5,
E.R._mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079168)
HIX0079168
HIT000391230
(
BC139909
)
(Slit homolog 1 protein precursor.)
genome : 98,944,431 - 98,945,704 (1,274)
query : 1 - 1,274 (1,274/1,310)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.999
InterPro :
IPR000372 : Leucine-rich repeat-containing N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, extr 11, cyto_nucl 11, nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079168)
HIX0209362
eHIT000000139 ( ESTsASS_10_139 )
Representative transcript
(Non-protein coding transcript.)
genome : 98,955,687 - 98,974,520 (18,834)
query : 1 - 571 (571/571)
4 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209362)
ESTs used for assembly :
DB043330
HIX0009085
HIT000056841
(
BX648194
)
(Rho GTPase-activating protein 19 isoform 3.)
genome : 98,981,932 - 99,052,430 (70,499)
query : 1 - 4,920 (4,920/4,972)
9 exons
identity = 0.998
3'(0.998;0.987;1.000;1.000;0.995;1.000;1.000;
0.996;0.990)5'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0009085
HIT000056836
(
BX648189
)
(Rho GTPase-activating protein 19; Rho-type GTPase-activating protein 19;)
genome : 98,981,936 - 99,052,405 (70,470)
query : 1 - 5,449 (5,449/5,494)
12 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
0.991;1.000;0.988;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0009085
HIT000306445
(
CR749412
)
(Rho GTPase-activating protein 19; Rho-type GTPase-activating protein 19;)
genome : 98,981,936 - 99,052,406 (70,471)
query : 1 - 5,450 (5,450/5,493)
12 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;0.985;1.000;
0.996;0.995;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0009085
HIT000221480
(
U79256
)
(Hypothetical short protein.)
genome : 98,981,930 - 98,983,126 (1,197)
query : 1 - 1,197 (1,197/1,218)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 7.5, cyto_nucl 6.83333, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0009085
HIT000210981 (
NM_032900
)
(Rho GTPase-activating protein 19; Rho-type GTPase-activating protein 19;)
genome : 98,981,930 - 99,052,430 (70,501)
query : 1 - 5,480 (5,480/5,495)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15, cyto 13.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0009085
HIT000657052 (
NM_001204300
)
(Rho GTPase-activating protein 19 isoform 2.)
genome : 98,981,930 - 99,052,430 (70,501)
query : 1 - 5,393 (5,393/5,408)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15, cyto 12.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0009085
HIT000723660 (
NM_001256423
)
(Rho GTPase-activating protein 19 isoform 3.)
genome : 98,981,930 - 99,030,447 (48,518)
query : 1 - 5,463 (5,463/5,478)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, cyto 9, extr 5, cyto_mito 5, cyto_pero 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0009085
HIT000033487
(
BC007848
)
(Hypothetical short protein.)
genome : 98,981,936 - 98,983,357 (1,422)
query : 1 - 1,422 (1,422/1,440)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 7.5, cyto_nucl 6.83333, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0009085
HIT000265967
(
BC082250
)
(Hypothetical short protein.)
genome : 98,981,936 - 98,983,529 (1,594)
query : 1 - 1,594 (1,594/1,611)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 7.5, cyto_nucl 6.83333, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0009085
HIT000337341
(
BC103749
)
(Hypothetical short protein.)
genome : 98,981,936 - 98,983,832 (1,897)
query : 1 - 1,897 (1,897/1,911)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 7.5, cyto_nucl 6.83333, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0009085
HIT000312223 (
ENST00000358531
)
(Rho GTPase-activating protein 19; Rho-type GTPase-activating protein 19;)
genome : 98,981,930 - 99,052,413 (70,484)
query : 1 - 5,463 (5,463/5,463)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15, cyto 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0009085
HIT000595704 (
ENST00000492211
)
(Rho GTPase-activating protein 19 isoform 1.)
genome : 98,981,930 - 99,052,380 (70,451)
query : 1 - 5,525 (5,525/5,525)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0009085
HIT000015314
(
AK090447
)
(Rho GTPase-activating protein 19 isoform 1.)
genome : 98,981,933 - 99,052,380 (70,448)
query : 1 - 5,522 (5,522/5,522)
13 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0009085
HIT000014902
(
AK074122
)
(Rho GTPase-activating protein 19 isoform 2.)
genome : 98,981,937 - 99,016,272 (34,336)
query : 1 - 4,553 (4,553/4,553)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.985;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 3, mito 3, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0009085
HIT000590756 (
ENST00000487035
)
(Rho GTPase-activating protein 19 isoform 2.)
genome : 98,981,937 - 99,016,272 (34,336)
query : 1 - 4,553 (4,553/4,553)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 3, mito 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0009085
HIT000387210
(
BC113888
)
(Rho GTPase-activating protein 19 isoform 2.)
genome : 98,982,900 - 99,052,406 (69,507)
query : 1 - 4,400 (4,400/4,407)
11 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;0.996;
1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0009085
HIT000387263
(
BC114490
)
Representative transcript
(Rho GTPase-activating protein 19; Rho-type GTPase-activating protein 19;)
genome : 98,982,901 - 99,052,406 (69,506)
query : 1 - 4,486 (4,486/4,486)
12 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
0.996;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ851690
Mus
sp. (Mouse) : AK164477
Macaca
sp. (Macaque) : AY650311
Oryzias
sp. (Medaka) : ENSORLT00000000074
Pongo
sp. (Orangutan) : ENSPPYT00000003034
Pan
sp. (Chimpanzee) : ENSPTRT00000050665
Tetraodon
sp. (Tetraodon) : GSTENT00030599001
Takifugu
sp. (Fugu) : SINFRUT00000146491
Takifugu
sp. (Fugu) : SINFRUT00000148808
Monodelphis
sp. (Opossum) : XM_001374130
Equus
sp. (Horse) : XM_001500418
Canis
sp. (Dog) : XM_534979
Bos
sp. (Cow) : XM_605328
Danio
sp. (Zebrafish) : XM_696074
HIX0009085
HIT000391862
(
DQ338460
)
(Rho GTPase-activating protein 19; Rho-type GTPase-activating protein 19;)
genome : 98,985,066 - 99,052,394 (67,329)
query : 2 - 2,309 (2,308/2,309)
12 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;0.985;1.000;
0.996;0.995;1.000;0.996;1.000)5'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0009085
HIT000018308
(
AK093441
)
(Rho GTPase-activating protein 19 isoform 3.)
genome : 98,985,066 - 99,030,421 (45,356)
query : 1 - 2,302 (2,302/2,302)
12 exons
identity = 0.998
3'(1.000;1.000;1.000;0.990;1.000;1.000;1.000;
0.991;0.995;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10, cyto 9, extr 5, cyto_mito 5, cyto_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0009085
HIT000352307 (
ENST00000371027
)
(Rho GTPase-activating protein 19 isoform 3.)
genome : 98,985,066 - 99,030,421 (45,356)
query : 1 - 2,301 (2,301/2,301)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, cyto 9, extr 5, cyto_mito 5, cyto_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0009085
HIT000018183
(
AK093316
)
(Rho GTPase-activating protein 19 isoform 3.)
genome : 98,985,140 - 99,030,456 (45,317)
query : 2 - 1,901 (1,900/1,901)
10 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;0.985;1.000;
0.996;1.000;0.936)5'
coverage = 0.999
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0009085
HIT000497679
(
AK303055
)
(Rho GTPase-activating protein 19; Rho-type GTPase-activating protein 19;)
genome : 98,985,521 - 99,052,391 (66,871)
query : 1 - 1,850 (1,850/1,850)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.996;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0009085
HIT000120997 (
ENST00000316676
)
(Rho GTPase-activating protein 19; Rho-type GTPase-activating protein 19;)
genome : 98,988,904 - 99,052,413 (63,510)
query : 1 - 1,503 (1,503/1,514)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15, cyto 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0009085
HIT000312032 (
ENST00000358308
)
(Rho GTPase-activating protein 19 isoform 2.)
genome : 98,988,904 - 99,052,413 (63,510)
query : 1 - 1,416 (1,416/1,427)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0009085
HIT000309518 (
ENST00000355366
)
(Rho GTPase-activating protein 19 isoform 3.)
genome : 98,988,904 - 99,030,421 (41,518)
query : 1 - 1,477 (1,477/1,488)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, cyto 9, extr 5, cyto_mito 5, cyto_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0009085
HIT000571134 (
ENST00000466484
)
(Rho GTPase-activating protein 19 isoform 3.)
genome : 99,019,187 - 99,052,392 (33,206)
query : 1 - 601 (601/601)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 23, cyto 5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0009085
HIT000596524 (
ENST00000493068
)
(Rho GTPase-activating protein 19 isoform 2.)
genome : 99,025,137 - 99,052,394 (27,258)
query : 1 - 812 (812/812)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 15, extr 9, nucl 4, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009085)
HIX0171224
HIT000554443 (
ENST00000456509
)
(CD164-related protein family protein.)
genome : 99,034,769 - 99,037,854 (3,086)
query : 1 - 365 (365/365)
3 exons
identity = 0.995
5'(1.000;1.000;0.987)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, cyto 7, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171224)
HIX0025907
pHIT000083248 ( pHIT000083248 )
(Proto-oncogene FRAT1; Frequently rearranged in advanced T-cell lymphomas 1; FRAT-1;)
genome : 99,062,084 - 99,080,050 (17,967)
query : 1 - 609 (609/609)
2 exons
InterPro :
IPR008014 : Glycogen synthase kinase-3 binding protein
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025907)
CAGE tag :
H10BA26H0703
HIX0025907
pHIT000082786 ( pHIT000082786 )
(Proto-oncogene FRAT1; Frequently rearranged in advanced T-cell lymphomas 1; FRAT-1;)
genome : 99,062,228 - 99,080,050 (17,823)
query : 1 - 648 (648/648)
2 exons
InterPro :
IPR008014 : Glycogen synthase kinase-3 binding protein
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025907)
CAGE tag :
H04BB02H2004
HIX0190579
HIT000512804 (
ENST00000414870
)
(Ribosomal protein L11/L12 family protein.)
genome : 99,068,895 - 99,069,715 (821)
query : 1 - 496 (496/496)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.5, nucl 5, golg 3, mito 2,
cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190579)
HIX0025907
HIT000202167 (
NM_005479
)
(Proto-oncogene FRAT1; Frequently rearranged in advanced T-cell lymphomas 1; FRAT-1;)
genome : 99,079,022 - 99,081,672 (2,651)
query : 1 - 2,651 (2,651/2,651)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 15, cyto 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025907)
HIX0025907
HIT000352301 (
ENST00000371021
)
(Proto-oncogene FRAT1; Frequently rearranged in advanced T-cell lymphomas 1; FRAT-1;)
genome : 99,079,022 - 99,081,672 (2,651)
query : 1 - 2,651 (2,651/2,651)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 15, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025907)
HIX0025907
HIT000220564
(
U58975
)
(Proto-oncogene FRAT1; Frequently rearranged in advanced T-cell lymphomas 1; FRAT-1;)
genome : 99,079,024 - 99,081,580 (2,557)
query : 3 - 2,558 (2,556/2,558)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 0.999
InterPro :
IPR008014 : Glycogen synthase kinase-3 binding protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 15, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025907)
HIX0025907
HIT000426111
(
AK307245
)
(Proto-oncogene FRAT1; Frequently rearranged in advanced T-cell lymphomas 1; FRAT-1;)
genome : 99,079,024 - 99,080,184 (1,161)
query : 1 - 842 (842/842)
2 exons
identity = 0.989
5'(0.995;0.985)3'
coverage = 1.000
InterPro :
IPR008014 : Glycogen synthase kinase-3 binding protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15, cyto 9.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025907)
HIX0025907
HIT000051158
(
BC034476
)
(Proto-oncogene FRAT1; Frequently rearranged in advanced T-cell lymphomas 1; FRAT-1;)
genome : 99,079,048 - 99,080,183 (1,136)
query : 6 - 1,141 (1,136/1,156)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.995
InterPro :
IPR008014 : Glycogen synthase kinase-3 binding protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 16, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025907)
HIX0025907
HIT000061243
(
AB074890
)
Representative transcript
(Proto-oncogene FRAT1; Frequently rearranged in advanced T-cell lymphomas 1; FRAT-1;)
genome : 99,079,098 - 99,081,097 (2,000)
query : 1 - 1,999 (1,999/1,999)
1 exon
identity = 0.999
5'(0.998)3'
coverage = 1.000
InterPro :
IPR008014 : Glycogen synthase kinase-3 binding protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 15, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025907)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000033246
Pongo
sp. (Orangutan) : ENSPPYT00000003036
Mus
sp. (Mouse) : U58974
Monodelphis
sp. (Opossum) : XM_001374068
Rattus
sp. (Rat) : XM_218737
Canis
sp. (Dog) : XM_543948
Bos
sp. (Cow) : XM_581986
HIX0025907
HIT000594519 (
ENST00000490980
)
(Hypothetical short protein.)
genome : 99,080,498 - 99,081,580 (1,083)
query : 1 - 633 (633/633)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025907)
HIX0201505
HIT000203893 (
NM_012083
)
(GSK-3-binding protein FRAT2; Frequently rearranged in advanced T-cell lymphomas 2; FRAT-2;)
genome : 99,092,254 - 99,094,458 (2,205)
query : 1 - 2,205 (2,205/2,222)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 14.5, cyto 11.5, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201505)
HIX0201505
HIT000038737
(
BC020165
)
(GSK-3-binding protein FRAT2; Frequently rearranged in advanced T-cell lymphomas 2; FRAT-2;)
genome : 99,092,274 - 99,094,433 (2,160)
query : 1 - 2,160 (2,160/2,186)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR008014 : Glycogen synthase kinase-3 binding protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 14.5, cyto 11.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201505)
HIX0201505
HIT000352299 (
ENST00000371019
)
(GSK-3-binding protein FRAT2; Frequently rearranged in advanced T-cell lymphomas 2; FRAT-2;)
genome : 99,092,255 - 99,094,458 (2,204)
query : 1 - 2,204 (2,204/2,204)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 14.5, cyto 11.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201505)
HIX0201505
HIT000059437
(
AB045118
)
Representative transcript
(GSK-3-binding protein FRAT2; Frequently rearranged in advanced T-cell lymphomas 2; FRAT-2;)
genome : 99,092,295 - 99,094,458 (2,164)
query : 1 - 2,164 (2,164/2,164)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR008014 : Glycogen synthase kinase-3 binding protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 14.5, cyto 11.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201505)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK081171
Macaca
sp. (Macaque) : ENSMMUT00000027577
Takifugu
sp. (Fugu) : SINFRUT00000179146
Bos
sp. (Cow) : XM_585194
HIX0201505
HIT000065258
(
AF062739
)
(GSK-3-binding protein FRAT2; Frequently rearranged in advanced T-cell lymphomas 2; FRAT-2;)
genome : 99,093,489 - 99,093,969 (481)
query : 1 - 481 (481/481)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR008014 : Glycogen synthase kinase-3 binding protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 10.8333, mito 9, cyto_pero 8,
nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201505)
HIX0201505
HIT000266332
(
BT009770
)
(GSK-3-binding protein FRAT2; Frequently rearranged in advanced T-cell lymphomas 2; FRAT-2;)
genome : 99,093,630 - 99,094,329 (700)
query : 1 - 700 (700/702)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.997
InterPro :
IPR008014 : Glycogen synthase kinase-3 binding protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 14.5, cyto 11.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201505)
HIX0209417
HIT000543742 (
ENST00000445808
)
(Conserved hypothetical protein.)
genome : 99,094,321 - 99,102,960 (8,640)
query : 1 - 805 (805/805)
2 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 8, cyto 7, nucl 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209417)
HIX0219097
HIT000485160 (
NM_001098175
)
(Nucleoside phosphatase GDA1/CD39 family protein.)
genome : 97,471,536 - 97,637,023 (165,488)
query : 1 - 12,615 (12,615/12,615)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.988;0.996;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 17, plas 12
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219097)
HIX0219097
HIT000551192 (
ENST00000453258
)
(Nucleoside phosphatase GDA1/CD39 family protein.)
genome : 97,471,536 - 97,629,452 (157,917)
query : 1 - 5,044 (5,044/5,044)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.988;0.996;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 17, plas 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219097)
HIX0219097
HIT000352487 (
ENST00000371207
)
(Nucleoside phosphatase GDA1/CD39 family protein.)
genome : 97,515,409 - 97,637,023 (121,615)
query : 1 - 12,515 (12,515/12,515)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.988;0.996;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219097)
HIX0219097
HIT000643009 (
ENST00000543964
)
(Nucleoside phosphatase GDA1/CD39 family protein.)
genome : 97,515,409 - 97,637,023 (121,615)
query : 1 - 12,387 (12,387/12,387)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.988;0.996;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 16, cyto 12, plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219097)
HIX0219097
HIT000653906 (
NM_001164178
)
(Nucleoside phosphatase GDA1/CD39 family protein.)
genome : 97,515,409 - 97,637,023 (121,615)
query : 1 - 12,515 (12,515/12,515)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.988;0.996;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, pero 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219097)
HIX0219097
HIT000653908 (
NM_001164181
)
(Nucleoside phosphatase GDA1/CD39 family protein.)
genome : 97,515,409 - 97,637,023 (121,615)
query : 1 - 12,387 (12,387/12,387)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.988;0.996;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 16, cyto 12, plas 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219097)
HIX0219097
HIT000198712 (
NM_001776
)
(Nucleoside phosphatase GDA1/CD39 family protein.)
genome : 97,515,673 - 97,637,023 (121,351)
query : 1 - 12,740 (12,740/12,740)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.988;0.996;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, E.R. 7, pero 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219097)
HIX0219097
HIT000352483 (
ENST00000371203
)
(Nucleoside phosphatase GDA1/CD39 family protein.)
genome : 97,515,673 - 97,637,023 (121,351)
query : 1 - 12,589 (12,589/12,589)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.988;0.996;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito_pero 8, cyto 7, mito 7, pero 7, plas 4, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219097)
HIX0219097
HIT000638170 (
ENST00000539125
)
(Nucleoside phosphatase GDA1/CD39 family protein.)
genome : 97,515,673 - 97,637,023 (121,351)
query : 1 - 12,471 (12,471/12,471)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;0.988;0.996;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito_pero 8, cyto 7, mito 7, pero 7, plas 4, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219097)
HIX0219097
HIT000653907 (
NM_001164179
)
(Nucleoside phosphatase GDA1/CD39 family protein.)
genome : 97,515,673 - 97,637,023 (121,351)
query : 1 - 12,617 (12,617/12,617)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.992;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, E.R. 7, pero 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219097)
HIX0219097
HIT000653909 (
NM_001164182
)
(Nucleoside phosphatase GDA1/CD39 family protein.)
genome : 97,515,673 - 97,637,023 (121,351)
query : 1 - 12,589 (12,589/12,589)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.988;0.996;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito_pero 8, cyto 7, mito 7, pero 7, plas 4, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219097)
HIX0219097
HIT000653910 (
NM_001164183
)
(Nucleoside phosphatase GDA1/CD39 family protein.)
genome : 97,515,673 - 97,637,023 (121,351)
query : 1 - 12,471 (12,471/12,471)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;0.988;0.996;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito_pero 8, cyto 7, mito 7, pero 7, plas 4, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219097)
HIX0219097
HIT000594650 (
ENST00000491114
)
(Conserved hypothetical protein.)
genome : 97,620,305 - 97,684,601 (64,297)
query : 1 - 492 (492/492)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 6, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219097)
HIX0219097
HIT000054307
(
BX537522
)
Representative transcript
(Conserved hypothetical protein.)
genome : 97,628,145 - 97,637,021 (8,877)
query : 1 - 8,877 (8,877/8,909)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219097)
HIX0219096
HIT000043296
(
AK123423
)
Representative transcript
(C2 domain containing protein.)
genome : 97,733,786 - 97,792,432 (58,647)
query : 2 - 2,468 (2,467/2,468)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;0.970;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 7, cyto 7, cyto_nucl 6, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219096)
HIX0219096
HIT000352478 (
ENST00000371198
)
(C2 domain containing protein.)
genome : 97,733,786 - 97,792,432 (58,647)
query : 1 - 2,467 (2,467/2,467)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 7, cyto 7, cyto_nucl 6, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219096)
HIX0219096
HIT000579503 (
ENST00000475252
)
(C2 domain containing protein.)
genome : 97,733,786 - 97,792,432 (58,647)
query : 1 - 2,467 (2,467/2,467)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 7, cyto 7, cyto_nucl 6, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219096)
HIX0009076
HIT000352422 (
ENST00000371142
)
(Transmembrane 9 superfamily member 3; EP70-P-iso; SM-11044-binding protein; Precursor;)
genome : 98,277,866 - 98,346,809 (68,944)
query : 1 - 6,141 (6,141/6,141)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009076)
HIX0009076
HIT000207731 (
NM_020123
)
(Transmembrane 9 superfamily member 3; EP70-P-iso; SM-11044-binding protein; Precursor;)
genome : 98,277,867 - 98,346,809 (68,943)
query : 1 - 6,140 (6,140/6,140)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009076)
HIX0009076
HIT000002057
(
AF160213
)
(Conserved hypothetical protein.)
genome : 98,280,431 - 98,346,603 (66,173)
query : 9 - 3,369 (3,361/3,389)
15 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.986;1.000;0.985;
1.000;1.000;1.000;0.949;0.988;1.000;1.000;
0.973)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009076)
HIX0009076
HIT000075752
(
AF269150
)
(Transmembrane 9 superfamily member 3; EP70-P-iso; SM-11044-binding protein; Precursor;)
genome : 98,280,431 - 98,346,809 (66,379)
query : 1 - 3,575 (3,575/3,592)
15 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR004240 : Nonaspanin (TM9SF)
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009076)
HIX0009076
HIT000081859
(
AK074824
)
(Transmembrane 9 superfamily member 3 precursor.)
genome : 98,280,432 - 98,321,824 (41,393)
query : 1 - 2,864 (2,864/2,864)
12 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004240 : Nonaspanin (TM9SF)
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009076)
HIX0009076
HIT000082486
(
AK075451
)
(Transmembrane 9 superfamily member 3 precursor.)
genome : 98,280,432 - 98,287,934 (7,503)
query : 15 - 1,976 (1,962/1,976)
4 exons
identity = 0.997
3'(0.997;1.000;1.000;0.993)5'
coverage = 0.993
InterPro :
IPR004240 : Nonaspanin (TM9SF)
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, plas 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009076)
HIX0009076
HIT000003231
(
AK000756
)
(Transmembrane 9 superfamily member 3 precursor.)
genome : 98,280,437 - 98,325,101 (44,665)
query : 1 - 2,973 (2,973/2,973)
13 exons
identity = 0.997
3'(0.997;0.987;1.000;0.993;1.000;0.993;1.000;
1.000;1.000;0.992;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009076)
HIX0009076
HIT000500777
(
BC136788
)
Representative transcript
(Transmembrane 9 superfamily member 3; EP70-P-iso; SM-11044-binding protein; Precursor;)
genome : 98,280,479 - 98,346,809 (66,331)
query : 1 - 3,528 (3,528/3,528)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR004240 : Nonaspanin (TM9SF)
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009076)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB174125
Mus
sp. (Mouse) : AK220279
Danio
sp. (Zebrafish) : BC046021
Bos
sp. (Cow) : BC151456
Gallus
sp. (Chicken) : BX931394
Oryzias
sp. (Medaka) : ENSORLT00000017942
Pongo
sp. (Orangutan) : ENSPPYT00000003028
Tetraodon
sp. (Tetraodon) : GSTENT00005423001
Takifugu
sp. (Fugu) : SINFRUT00000174672
Pan
sp. (Chimpanzee) : XM_001160298
Monodelphis
sp. (Opossum) : XM_001374298
Equus
sp. (Horse) : XM_001917088
Rattus
sp. (Rat) : XM_220013
Canis
sp. (Dog) : XM_844680
HIX0009076
HIT000500778
(
BC136789
)
(Transmembrane 9 superfamily member 3; EP70-P-iso; SM-11044-binding protein; Precursor;)
genome : 98,280,479 - 98,346,809 (66,331)
query : 1 - 3,527 (3,527/3,527)
15 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR004240 : Nonaspanin (TM9SF)
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009076)
HIX0009076
HIT000502824
(
BC144412
)
(Transmembrane 9 superfamily member 3; EP70-P-iso; SM-11044-binding protein; Precursor;)
genome : 98,280,479 - 98,346,657 (66,179)
query : 9 - 3,385 (3,377/3,385)
15 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.995;
0.994)5'
coverage = 0.998
InterPro :
IPR004240 : Nonaspanin (TM9SF)
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009076)
HIX0009076
HIT000039046
(
BC020959
)
(Transmembrane 9 superfamily member 3 precursor.)
genome : 98,280,744 - 98,336,485 (55,742)
query : 1 - 2,843 (2,843/2,870)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004240 : Nonaspanin (TM9SF)
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009076)
HIX0009076
HIT000252863
(
AY358819
)
(Transmembrane 9 superfamily member 3 precursor.)
genome : 98,280,744 - 98,336,574 (55,831)
query : 1 - 2,932 (2,932/2,955)
14 exons
identity = 0.998
3'(0.999;1.000;1.000;0.993;1.000;0.986;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.995)5'
coverage = 1.000
InterPro :
IPR004240 : Nonaspanin (TM9SF)
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009076)
HIX0009076
HIT000010710
(
AK027438
)
(Transmembrane 9 superfamily member 3 precursor.)
genome : 98,280,745 - 98,312,743 (31,999)
query : 1 - 2,311 (2,311/2,311)
10 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004240 : Nonaspanin (TM9SF)
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009076)
HIX0009076
HIT000082128
(
AK075093
)
(Transmembrane 9 superfamily member 3 precursor.)
genome : 98,280,745 - 98,312,731 (31,987)
query : 1 - 2,299 (2,299/2,299)
10 exons
identity = 0.999
3'(0.999;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004240 : Nonaspanin (TM9SF)
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009076)
HIX0009076
HIT000011060
(
AK027788
)
(Transmembrane 9 superfamily member 3 precursor.)
genome : 98,281,203 - 98,336,561 (55,359)
query : 1 - 2,459 (2,459/2,459)
14 exons
identity = 0.999
3'(0.999;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004240 : Nonaspanin (TM9SF)
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009076)
HIX0009076
HIT000069925
(
AF116347
)
(Transmembrane 9 superfamily member 3 precursor.)
genome : 98,281,953 - 98,346,559 (64,607)
query : 1 - 1,804 (1,804/1,804)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR004240 : Nonaspanin (TM9SF)
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009076)
HIX0009076
HIT000433214
(
AK314348
)
(Transmembrane 9 superfamily member 3; EP70-P-iso; SM-11044-binding protein; Precursor;)
genome : 98,282,020 - 98,346,775 (64,756)
query : 1 - 1,953 (1,953/1,953)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR004240 : Nonaspanin (TM9SF)
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009076)
HIX0009076
HIT000541572 (
ENST00000443638
)
(Transmembrane 9 superfamily member 3 precursor.)
genome : 98,311,068 - 98,347,209 (36,142)
query : 1 - 868 (868/868)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, E.R._mito 8.5, cyto_pero 8.5, mito 7.5,
cyto_golg 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009076)
HIX0009076
HIT000569391 (
ENST00000464654
)
(Transmembrane 9 superfamily member 3 precursor.)
genome : 98,312,781 - 98,337,299 (24,519)
query : 1 - 658 (658/658)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 15.1667, cyto_plas 12.8333, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009076)
HIX0219126
HIT000427222
(
AK308356
)
Representative transcript
(Conserved hypothetical protein.)
genome : 98,592,055 - 98,742,626 (150,572)
query : 1 - 2,913 (2,913/2,913)
8 exons
identity = 0.998
5'(1.000;1.000;0.985;1.000;1.000;0.997;0.989;
0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219126)
HIX0079267
HIT000551481 (
ENST00000453547
)
(Rho GTPase-activating protein 19 isoform 1.)
genome : 98,757,795 - 99,052,384 (294,590)
query : 1 - 8,956 (8,956/8,956)
47 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 15.5, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079267)
HIX0079267
HIT000660062 (
NR_037909
)
(Rho GTPase-activating protein 19 isoform 1.)
genome : 98,912,799 - 99,052,430 (139,632)
query : 1 - 1,916 (1,916/1,916)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 15.5, cyto 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079267)
HIX0079267
HIT000251923
(
AY336750
)
Representative transcript
(Rho GTPase-activating protein 19 isoform 1.)
genome : 98,912,803 - 99,052,394 (139,592)
query : 2 - 1,877 (1,876/1,877)
15 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.985;1.000;0.996;0.995;1.000;0.996;
1.000)5'
coverage = 0.999
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079267)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ851690
Mus
sp. (Mouse) : AK164477
Macaca
sp. (Macaque) : AY650311
Oryzias
sp. (Medaka) : ENSORLT00000000074
Oryzias
sp. (Medaka) : ENSORLT00000009953
Pongo
sp. (Orangutan) : ENSPPYT00000003034
Pan
sp. (Chimpanzee) : ENSPTRT00000050665
Tetraodon
sp. (Tetraodon) : GSTENT00030599001
Takifugu
sp. (Fugu) : SINFRUT00000146491
Takifugu
sp. (Fugu) : SINFRUT00000148808
Monodelphis
sp. (Opossum) : XM_001374130
Equus
sp. (Horse) : XM_001500418
Canis
sp. (Dog) : XM_534979
Bos
sp. (Cow) : XM_605328
Danio
sp. (Zebrafish) : XM_696074
HIX0079267
HIT000583684 (
ENST00000479633
)
(Rho GTPase-activating protein 19 isoform 1.)
genome : 98,912,803 - 99,052,394 (139,592)
query : 1 - 1,876 (1,876/1,876)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 15.5, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079267)
HIX0009072
pHIT000109317 ( pHIT000109317 )
(Conserved hypothetical protein.)
genome : 98,027,032 - 98,095,989 (68,958)
query : 1 - 1,689 (1,689/1,689)
12 exons
InterPro :
IPR001357 : BRCT domain
IPR001726 : DNA nucleotidylexotransferase (TdT) / DNA-directed DNA/RNA polymerase mu
IPR002054 : DNA-directed DNA polymerase X
IPR010996 : DNA polymerase beta-like, N-terminal domain
IPR018944 : DNA polymerase lambda, fingers domain
IPR022312 : DNA polymerase family X
IPR027421 : DNA polymerase family X lyase domain
IPR029398 : DNA polymerase beta, thumb domain
GO :
0003677 : Molecular Function : DNA binding
0003824 : Molecular Function : catalytic activity
0003887 : Molecular Function : DNA-directed DNA polymerase activity
0016779 : Molecular Function : nucleotidyltransferase activity
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009072)
CAGE tag :
T10R05D90586
HIX0115029
pHIT000017958 ( pHIT000017958 )
Representative transcript
(Hypothetical short protein.)
genome : 98,247,972 - 98,248,163 (192)
query : 1 - 192 (192/192)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0115029)
CAGE tag :
H04BA38H1906,H05BB25K2001,H05BE58M0903
H05BE87E2204,H05BE92G1806
HIX0025907
pHIT000083248 ( pHIT000083248 )
(Proto-oncogene FRAT1; Frequently rearranged in advanced T-cell lymphomas 1; FRAT-1;)
genome : 99,062,084 - 99,080,050 (17,967)
query : 1 - 609 (609/609)
2 exons
InterPro :
IPR008014 : Glycogen synthase kinase-3 binding protein
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025907)
CAGE tag :
H05BF60D1804,H09BA07M1708,H10BA04H2012
H10BA04I0702,H10BA26H0703
HIX0025907
pHIT000082786 ( pHIT000082786 )
(Proto-oncogene FRAT1; Frequently rearranged in advanced T-cell lymphomas 1; FRAT-1;)
genome : 99,062,228 - 99,080,050 (17,823)
query : 1 - 648 (648/648)
2 exons
InterPro :
IPR008014 : Glycogen synthase kinase-3 binding protein
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025907)
CAGE tag :
H04BA67E1204,H04BA88P1103,H04BA89K2411
H04BB02C1002,H04BB02H2004
HIX0209362
eHIT000000139 ( ESTsASS_10_139 )
Representative transcript
(Non-protein coding transcript.)
genome : 98,955,687 - 98,974,520 (18,834)
query : 1 - 571 (571/571)
4 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209362)
ESTs used for assembly :
DB043330
AL365273.25
97500001-97679197 F +
NCBI
AL513355.16
97679198-97790409 F +
NCBI
AL356155.10
97790410-97861450 F +
NCBI
AC021037.6
97861451-98039369 F -
NCBI
AL391057.12
98039370-98041363 F +
NCBI
AL136181.13
98041364-98186272 F +
NCBI
AL391136.10
98186273-98250460 F +
NCBI
AL138765.18
98250461-98411280 F +
NCBI
AL591364.3
98411281-98431174 F +
NCBI
AL358235.16
98431175-98535683 F +
NCBI
AL162502.17
98535684-98697302 F +
NCBI
AL442123.12
98697303-98791962 F +
NCBI
AL512424.14
98791963-98962472 F +
NCBI
AL359385.28
98962473-99059880 F +
NCBI
AL355490.24
99059881-99100000 F +
NCBI