bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0209867
HIT000624867 (
ENST00000525638
)
genome : 109,508,194 - 109,508,854 (661)
query : 1 - 661 (661/661)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209867)
HIX0210409
HIT000633313 (
ENST00000534252
)
genome : 109,622,172 - 109,694,573 (72,402)
query : 1 - 613 (613/613)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210409)
HIX0210205
HIT000630268 (
ENST00000531132
)
genome : 109,777,730 - 109,778,467 (738)
query : 1 - 738 (738/738)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210205)
HIX0209731
HIT000585909 (
ENST00000481955
)
genome : 109,852,918 - 109,853,769 (852)
query : 1 - 852 (852/852)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209731)
HIX0209851
HIT000624650 (
ENST00000525414
)
genome : 109,920,253 - 109,920,885 (633)
query : 1 - 633 (633/633)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209851)
HIX0010097
HIT000019956
(
AK095101
)
genome : 109,963,525 - 110,033,126 (69,602)
query : 5 - 2,312 (2,308/2,312)
5 exons
identity = 0.994
5'(1.000;0.989;1.000;0.997;0.984)3'
coverage = 0.998
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010097)
HIX0010097
HIT000111728 (
ENST00000278590
)
genome : 109,964,087 - 110,042,566 (78,480)
query : 1 - 8,807 (8,807/8,807)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010097)
HIX0010097
HIT000486270 (
NM_033390
)
genome : 109,964,087 - 110,042,566 (78,480)
query : 1 - 8,807 (8,807/8,807)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010097)
HIX0010097
HIT000490061
(
AK295437
)
genome : 109,964,087 - 110,037,097 (73,011)
query : 1 - 3,339 (3,339/3,339)
6 exons
identity = 0.999
5'(0.986;0.999;1.000;1.000;1.000;0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010097)
HIX0010097
HIT000493724
(
AK299100
)
genome : 110,001,729 - 110,036,659 (34,931)
query : 3 - 2,933 (2,931/2,933)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010097)
HIX0010097
HIT000627847 (
ENST00000528673
)
genome : 110,001,729 - 110,036,659 (34,931)
query : 1 - 2,931 (2,931/2,931)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010097)
HIX0010097
HIT000061510
(
AB096241
)
genome : 110,006,579 - 110,042,564 (35,986)
query : 1 - 9,542 (9,542/9,542)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010097)
HIX0010097
HIT000551023 (
ENST00000453089
)
genome : 110,006,579 - 110,042,564 (35,986)
query : 1 - 9,542 (9,542/9,542)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010097)
HIX0010097
HIT000001442
(
AB051513
)
genome : 110,023,647 - 110,042,564 (18,918)
query : 1 - 7,981 (7,981/7,981)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010097)
HIX0010097
HIT000027805
(
AL832893
)
genome : 110,030,164 - 110,041,323 (11,160)
query : 1 - 6,417 (6,417/6,425)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010097)
HIX0036307
HIT000250366
(
AL355717
)
genome : 110,033,009 - 110,033,512 (504)
query : 1 - 507 (507/507)
1 exon
identity = 0.972
3'(0.972)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036307)
HIX0010098
HIT000468662
(
DQ916741
)
genome : 110,045,605 - 110,167,437 (121,833)
query : 1 - 2,558 (2,558/2,558)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.996)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000468663
(
DQ916742
)
genome : 110,045,605 - 110,167,437 (121,833)
query : 1 - 2,511 (2,511/2,511)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000627675 (
ENST00000528498
)
genome : 110,045,605 - 110,167,437 (121,833)
query : 1 - 2,511 (2,511/2,511)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000629892 (
ENST00000530749
)
genome : 110,045,605 - 110,167,437 (121,833)
query : 1 - 2,558 (2,558/2,558)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000724330 (
NM_001260493
)
genome : 110,045,605 - 110,167,437 (121,833)
query : 1 - 2,511 (2,511/2,511)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000468659
(
DQ916738
)
genome : 110,066,286 - 110,167,437 (101,152)
query : 1 - 2,761 (2,761/2,761)
16 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000468660
(
DQ916739
)
genome : 110,066,286 - 110,167,437 (101,152)
query : 1 - 1,549 (1,549/1,549)
8 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
0.996)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000468661
(
DQ916740
)
genome : 110,066,286 - 110,167,437 (101,152)
query : 1 - 1,814 (1,814/1,814)
9 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000505091 (
ENST00000405097
)
genome : 110,066,286 - 110,167,437 (101,152)
query : 1 - 2,761 (2,761/2,761)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000628068 (
ENST00000528900
)
genome : 110,066,286 - 110,167,437 (101,152)
query : 1 - 1,814 (1,814/1,814)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000629453 (
ENST00000530301
)
genome : 110,066,286 - 110,167,437 (101,152)
query : 1 - 1,549 (1,549/1,549)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000724329 (
NM_001260492
)
genome : 110,066,286 - 110,167,437 (101,152)
query : 1 - 2,761 (2,761/2,761)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000724332 (
NM_001260495
)
genome : 110,066,286 - 110,167,437 (101,152)
query : 1 - 1,814 (1,814/1,814)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000724333 (
NM_001260496
)
genome : 110,066,286 - 110,167,437 (101,152)
query : 1 - 1,549 (1,549/1,549)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.996)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0036202
HIT000061511
(
AB096242
)
genome : 110,087,283 - 110,092,627 (5,345)
query : 2 - 5,350 (5,349/5,350)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036202)
HIX0010098
HIT000053090
(
BC047109
)
genome : 110,100,175 - 110,167,337 (67,163)
query : 1 - 4,378 (4,378/4,412)
14 exons
identity = 0.997
3'(0.995;1.000;1.000;1.000;0.992;0.994;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.993)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000091818
(
BC029467
)
genome : 110,100,176 - 110,101,288 (1,113)
query : 1 - 1,113 (1,113/1,145)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.998
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000026039
(
AL137751
)
genome : 110,100,172 - 110,107,396 (7,225)
query : 239 - 3,638 (3,400/3,658)
3 exons
identity = 0.997
3'(0.996;1.000;1.000)5'
coverage = 0.934
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000057183
(
BX648536
)
genome : 110,100,175 - 110,108,493 (8,319)
query : 1 - 3,194 (3,194/3,215)
4 exons
identity = 0.996
3'(0.995;1.000;1.000;1.000)5'
coverage = 0.998
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000199781 (
NM_002906
)
genome : 110,100,167 - 110,167,437 (67,271)
query : 1 - 4,489 (4,489/4,498)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.996)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000724331 (
NM_001260494
)
genome : 110,100,166 - 110,167,437 (67,272)
query : 1 - 4,119 (4,119/4,123)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.996)5'
coverage = 0.999
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000626735 (
ENST00000527537
)
genome : 110,100,172 - 110,107,396 (7,225)
query : 1 - 3,403 (3,403/3,403)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000135745 (
ENST00000343115
)
genome : 110,100,175 - 110,167,447 (67,273)
query : 1 - 4,491 (4,491/4,491)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000631563 (
ENST00000532461
)
genome : 110,100,175 - 110,108,582 (8,408)
query : 1 - 3,286 (3,286/3,286)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000066903
(
AF086024
)
genome : 110,100,908 - 110,101,283 (376)
query : 1 - 376 (376/385)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0095892
HIT000389226
(
BC127248
)
genome : 110,102,076 - 110,102,477 (402)
query : 13 - 415 (403/427)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.944
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0095892)
HIX0010098
HIT000633032 (
ENST00000533961
)
genome : 110,102,275 - 110,104,248 (1,974)
query : 1 - 771 (771/771)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000629283 (
ENST00000530131
)
genome : 110,102,276 - 110,167,339 (65,064)
query : 1 - 1,911 (1,911/1,911)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000489699
(
AK295075
)
genome : 110,102,276 - 110,150,443 (48,168)
query : 1 - 1,724 (1,724/1,724)
11 exons
identity = 0.998
3'(0.998;0.996;1.000;1.000;1.000;1.000;1.000;
1.000;0.988;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000643596 (
ENST00000544551
)
genome : 110,102,276 - 110,150,443 (48,168)
query : 1 - 1,725 (1,725/1,725)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000191480
(
L02320
)
genome : 110,102,355 - 110,150,434 (48,080)
query : 14 - 2,021 (2,008/2,022)
13 exons
identity = 1.000
3'(1.000;1.000;0.989;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000499674
(
AK316061
)
genome : 110,102,478 - 110,167,339 (64,862)
query : 1 - 1,709 (1,709/1,709)
12 exons
identity = 0.999
3'(1.000;1.000;0.989;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.993)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000629237 (
ENST00000530085
)
genome : 110,102,563 - 110,108,611 (6,049)
query : 1 - 793 (793/793)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000431769
(
AK312903
)
genome : 110,102,594 - 110,167,339 (64,746)
query : 1 - 1,964 (1,964/1,964)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.993)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000522816_02 (
ENST00000424882
)
genome : 110,102,600 - 110,102,710 (111)
query : 1 - 111 (111/111)
1 exon
identity = 0.973
3'(0.973)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000090233
(
BC020751
)
genome : 110,118,519 - 110,167,337 (48,819)
query : 1 - 1,209 (1,209/1,238)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000086148
(
BC002626
)
genome : 110,124,670 - 110,167,321 (42,652)
query : 1 - 1,154 (1,154/1,213)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992)5'
coverage = 0.989
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000628927 (
ENST00000529774
)
genome : 110,124,670 - 110,128,933 (4,264)
query : 1 - 512 (512/512)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000633732 (
ENST00000534683
)
genome : 110,126,031 - 110,167,337 (41,307)
query : 1 - 562 (562/562)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000631229 (
ENST00000532118
)
genome : 110,134,674 - 110,159,116 (24,443)
query : 1 - 536 (536/536)
4 exons
identity = 0.993
3'(0.986;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000627733 (
ENST00000528556
)
genome : 110,134,685 - 110,167,322 (32,638)
query : 1 - 803 (803/803)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000633060 (
ENST00000533991
)
genome : 110,134,770 - 110,167,365 (32,596)
query : 1 - 544 (544/544)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0010098
HIT000632754 (
ENST00000533678
)
genome : 110,135,504 - 110,167,343 (31,840)
query : 1 - 531 (531/531)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010098)
HIX0017479
HIT000044052
(
AK124179
)
genome : 110,199,130 - 110,278,336 (79,207)
query : 1 - 2,086 (2,086/2,086)
6 exons
identity = 0.993
5'(1.000;1.000;0.968;0.977;1.000;0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017479)
HIX0017479
HIT000625814 (
ENST00000526605
)
genome : 110,225,855 - 110,277,124 (51,270)
query : 1 - 720 (720/720)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017479)
HIX0017479
HIT000018972
(
AK094117
)
genome : 110,225,920 - 110,278,336 (52,417)
query : 1 - 1,693 (1,693/1,693)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017479)
HIX0017479
HIT000625911 (
ENST00000526703
)
genome : 110,225,924 - 110,252,710 (26,787)
query : 1 - 555 (555/555)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017479)
HIX0010099
HIT000107680 (
ENST00000260270
)
genome : 110,300,607 - 110,335,605 (34,999)
query : 1 - 3,206 (3,206/3,206)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010099)
HIX0010099
HIT000200882 (
NM_004109
)
genome : 110,300,661 - 110,335,608 (34,948)
query : 1 - 3,155 (3,155/3,155)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010099)
HIX0010099
HIT000034881
(
BC010284
)
genome : 110,300,692 - 110,335,605 (34,914)
query : 1 - 3,121 (3,121/3,138)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010099)
HIX0010099
HIT000037817
(
BC017063
)
genome : 110,300,711 - 110,333,798 (33,088)
query : 1 - 1,295 (1,295/1,309)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010099)
HIX0010099
HIT000191171
(
J03548
)
genome : 110,300,712 - 110,333,972 (33,261)
query : 1 - 1,463 (1,463/1,463)
4 exons
identity = 0.982
5'(0.994;0.984;1.000;0.975)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010099)
HIX0010099
HIT000061512
(
AB096243
)
genome : 110,300,822 - 110,333,437 (32,616)
query : 5 - 827 (823/827)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.995
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010099)
HIX0010099
HIT000194610
(
M18003
)
genome : 110,300,822 - 110,333,437 (32,616)
query : 5 - 827 (823/827)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.995
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010099)
HIX0010099
HIT000195614
(
M34788
)
genome : 110,300,827 - 110,333,793 (32,967)
query : 1 - 1,174 (1,174/1,174)
4 exons
identity = 0.998
5'(0.995;1.000;1.000;0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010099)
HIX0010099
HIT000099601
(
BT006681
)
genome : 110,300,845 - 110,333,190 (32,346)
query : 1 - 553 (553/555)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.996
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010099)
HIX0010100
HIT000052196
(
BC039340
)
genome : 110,447,767 - 110,460,394 (12,628)
query : 1 - 2,608 (2,608/2,624)
6 exons
identity = 1.000
3'(1.000;0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010100)
HIX0010100
HIT000724281 (
NM_001258416
)
genome : 110,447,759 - 110,583,912 (136,154)
query : 1 - 6,085 (6,085/6,085)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010100)
HIX0010100
HIT000724283 (
NM_001258418
)
genome : 110,447,759 - 110,583,912 (136,154)
query : 1 - 6,017 (6,017/6,017)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010100)
HIX0010100
HIT000317476 (
NM_020809
)
genome : 110,447,759 - 110,583,451 (135,693)
query : 1 - 6,196 (6,196/6,196)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010100)
HIX0010100
HIT000724282 (
NM_001258417
)
genome : 110,447,759 - 110,583,451 (135,693)
query : 1 - 5,899 (5,899/5,899)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010100)
HIX0010100
HIT000724280 (
NM_001258415
)
genome : 110,447,759 - 110,582,773 (135,015)
query : 1 - 6,199 (6,199/6,199)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010100)
HIX0010100
HIT000107684 (
ENST00000260283
)
genome : 110,447,766 - 110,583,451 (135,686)
query : 1 - 6,189 (6,189/6,189)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010100)
HIX0010100
HIT000311029 (
ENST00000357139
)
genome : 110,447,766 - 110,561,721 (113,956)
query : 1 - 5,826 (5,826/5,826)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010100)
HIX0010100
HIT000425087
(
AK292290
)
genome : 110,447,767 - 110,460,409 (12,643)
query : 1 - 2,623 (2,623/2,623)
6 exons
identity = 1.000
3'(1.000;0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010100)
HIX0010100
HIT000628746 (
ENST00000529591
)
genome : 110,447,767 - 110,460,409 (12,643)
query : 1 - 2,623 (2,623/2,623)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010100)
HIX0010100
HIT000254949
(
AY496265
)
genome : 110,447,778 - 110,583,912 (136,135)
query : 1 - 5,997 (5,997/5,997)
15 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010100)
HIX0010100
HIT000254951
(
AY496267
)
genome : 110,447,778 - 110,583,912 (136,135)
query : 1 - 6,065 (6,065/6,065)
16 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010100)
HIX0010100
HIT000626795 (
ENST00000527598
)
genome : 110,447,778 - 110,583,912 (136,135)
query : 1 - 5,998 (5,998/5,998)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010100)
HIX0010100
HIT000632435 (
ENST00000533353
)
genome : 110,447,778 - 110,583,912 (136,135)
query : 1 - 6,066 (6,066/6,066)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010100)
HIX0010100
HIT000254947
(
AY496263
)
genome : 110,447,778 - 110,583,451 (135,674)
query : 1 - 6,176 (6,176/6,176)
16 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010100)
HIX0010100
HIT000254948
(
AY496264
)
genome : 110,447,778 - 110,583,451 (135,674)
query : 1 - 5,879 (5,879/5,879)
15 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010100)
HIX0010100
HIT000627999 (
ENST00000528829
)
genome : 110,447,778 - 110,583,451 (135,674)
query : 1 - 5,880 (5,880/5,880)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010100)
HIX0010100
HIT000001106
(
AB037812
)
genome : 110,447,778 - 110,582,964 (135,187)
query : 1 - 5,901 (5,901/5,901)
15 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010100)
HIX0010100
HIT000254950
(
AY496266
)
genome : 110,447,778 - 110,582,773 (134,996)
query : 1 - 6,179 (6,179/6,179)
15 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010100)
HIX0010100
HIT000624006 (
ENST00000524756
)
genome : 110,447,778 - 110,582,773 (134,996)
query : 1 - 6,180 (6,180/6,180)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010100)
HIX0010100
HIT000426468
(
AK307602
)
genome : 110,450,520 - 110,583,148 (132,629)
query : 1 - 3,344 (3,344/3,344)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010100)
HIX0171444
HIT000626018 (
ENST00000526810
)
genome : 110,658,749 - 110,659,699 (951)
query : 1 - 951 (951/951)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171444)
HIX0171444
HIT000513244 (
ENST00000415310
)
genome : 110,658,755 - 110,659,735 (981)
query : 1 - 981 (981/981)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171444)
HIX0210171
HIT000629736 (
ENST00000530590
)
genome : 110,747,718 - 110,747,901 (184)
query : 1 - 184 (184/184)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210171)
HIX0036203
HIT000061513
(
AB096244
)
genome : 110,769,988 - 110,771,011 (1,024)
query : 1 - 1,024 (1,024/1,032)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036203)
HIX0192127
pHIT000110953 ( pHIT000110953 )
genome : 110,943,776 - 110,976,619 (32,844)
query : 1 - 414 (414/414)
3 exons
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192127)
CAGE tag :
T11R0695D1C0
HIX0192127
HIT000579842 (
ENST00000475609
)
genome : 110,976,271 - 110,976,619 (349)
query : 1 - 349 (349/349)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192127)
HIX0192127
pHIT000110953 ( pHIT000110953 )
genome : 110,943,776 - 110,976,619 (32,844)
query : 1 - 414 (414/414)
3 exons
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192127)
CAGE tag :
T11R0695D1C0
AP003102.2
109500001-109531841 F +
NCBI
AP002444.4
109531842-109669969 F +
NCBI
AP002006.6
109669970-109728674 F +
NCBI
AP001981.6
109728675-109868777 F +
NCBI
AP001889.5
109868778-110018951 F +
NCBI
AP000901.5
110018952-110129407 F +
NCBI
AP002788.3
110129408-110237622 F +
NCBI
AP000924.7
110237623-110349200 F +
NCBI
AP001883.6
110349201-110461429 F +
NCBI
AP001980.6
110461430-110538745 F +
NCBI
AP003460.3
110538746-110615095 F +
NCBI
AC009294.8
110615096-110712467 F -
NCBI
AP002963.3
110712468-110867498 F +
NCBI
AP003973.3
110867499-111039656 F +
NCBI
AP002448.3
111039657-111100000 F +
NCBI