bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0219501
HIT000522247 (
ENST00000424313
)
(Conserved hypothetical protein.)
genome : 115,498,783 - 115,500,461 (1,679)
query : 1 - 479 (479/479)
3 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 11.5, cyto_nucl 8.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219501)
HIX0026295
HIT000054296
(
BX537510
)
Representative transcript
(Conserved hypothetical protein.)
genome : 115,509,281 - 115,517,677 (8,397)
query : 1 - 8,403 (8,403/8,419)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 2.5, cyto_nucl 2.5, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026295)
HIX0026295
HIT000677733 (
ENST00000564619
)
(Hypothetical protein.)
genome : 115,509,281 - 115,517,680 (8,400)
query : 1 - 8,400 (8,400/8,400)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 5.33333, cyto 5, nucl 4.5,
cyto_pero 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026295)
HIX0026213
HIT000044861
(
AK124988
)
Representative transcript
(Conserved hypothetical protein.)
genome : 115,529,886 - 115,532,135 (2,250)
query : 1 - 2,250 (2,250/2,250)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 13, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026213)
HIX0210470
HIT000638350 (
ENST00000539305
)
(Conserved hypothetical protein.)
genome : 115,530,376 - 115,713,864 (183,489)
query : 1 - 574 (574/574)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210470)
HIX0035976
HIT000259685
(
BC057386
)
(Conserved hypothetical protein.)
genome : 115,602,664 - 115,605,460 (2,797)
query : 1 - 2,797 (2,797/2,831)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035976)
HIX0035976
HIT000094991
(
BC037868
)
Representative transcript
(Conserved hypothetical protein.)
genome : 115,603,672 - 115,605,480 (1,809)
query : 1 - 1,446 (1,446/1,459)
2 exons
identity = 0.999
3'(1.000;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035976)
HIX0022035
HIT000015469
(
AK090602
)
(Conserved hypothetical protein.)
genome : 115,624,966 - 115,630,912 (5,947)
query : 1 - 3,324 (3,324/3,324)
3 exons
identity = 0.997
3'(0.997;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 13.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022035)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001152277
HIX0022035
HIT000602206 (
ENST00000499809
)
(Conserved hypothetical protein.)
genome : 115,624,966 - 115,630,912 (5,947)
query : 1 - 3,322 (3,322/3,322)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022035)
HIX0022035
HIT000659284 (
NR_034148
)
(Conserved hypothetical protein.)
genome : 115,626,052 - 115,630,918 (4,867)
query : 1 - 2,242 (2,242/2,256)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 13.5, extr 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022035)
HIX0022035
HIT000428100
(
AK309234
)
Representative transcript
(Conserved hypothetical protein.)
genome : 115,628,169 - 115,631,345 (3,177)
query : 1 - 982 (982/982)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022035)
HIX0022035
HIT000602467 (
ENST00000501294
)
(Conserved hypothetical protein.)
genome : 115,628,169 - 115,631,345 (3,177)
query : 1 - 982 (982/982)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022035)
HIX0022035
HIT000426174
(
AK307308
)
(Conserved hypothetical protein.)
genome : 115,628,181 - 115,630,915 (2,735)
query : 1 - 995 (995/995)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022035)
HIX0022035
HIT000613803 (
ENST00000514294
)
(Conserved hypothetical protein.)
genome : 115,628,181 - 115,630,915 (2,735)
query : 1 - 995 (995/995)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022035)
HIX0022035
HIT000636115 (
ENST00000537070
)
(Hypothetical protein.)
genome : 115,628,435 - 115,630,904 (2,470)
query : 1 - 693 (693/693)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 12.3333, extr 9, mito_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022035)
HIX0022035
HIT000634728 (
ENST00000535683
)
(Hypothetical protein.)
genome : 115,628,638 - 115,630,918 (2,281)
query : 1 - 504 (504/504)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 12.3333, extr 9, mito_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022035)
HIX0022035
HIT000714536 (
ENST00000602803
)
(Hypothetical protein.)
genome : 115,628,994 - 115,629,571 (578)
query : 1 - 578 (578/578)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, extr 11, nucl 10, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022035)
HIX0209654
eHIT000001497 ( ESTsASS_11_480 )
Representative transcript
(Non-protein coding transcript.)
genome : 115,793,824 - 115,800,237 (6,414)
query : 1 - 472 (472/472)
4 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209654)
ESTs used for assembly :
AI693407,AI806743
HIX0209637
HIT000636536 (
ENST00000537491
)
(Hypothetical protein.)
genome : 115,803,492 - 115,813,713 (10,222)
query : 1 - 548 (548/548)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209637)
HIX0209637
HIT000638267 (
ENST00000539222
)
(Non-protein coding transcript.)
genome : 115,803,575 - 115,810,928 (7,354)
query : 1 - 303 (303/303)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209637)
HIX0209718
HIT000579994 (
ENST00000475768
)
(Ribosomal protein L15e family protein.)
genome : 115,820,914 - 115,821,519 (606)
query : 1 - 606 (606/606)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 11, cyto_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209718)
HIX0209724
HIT000582958 (
ENST00000478870
)
(Conserved hypothetical protein.)
genome : 115,821,823 - 115,822,209 (387)
query : 1 - 387 (387/387)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 8, cyto 2.5, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209724)
HIX0171568
HIT000550563 (
ENST00000452629
)
(Hypothetical short protein.)
genome : 116,367,616 - 116,371,347 (3,732)
query : 1 - 921 (921/921)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 5, cyto_nucl 5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171568)
HIX0095907
HIT000395373
(
EF212254
)
Representative transcript
(Non-protein coding transcript.)
genome : 116,480,712 - 116,480,811 (100)
query : 1 - 100 (100/100)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0095907)
HIX0171305
HIT000542057 (
ENST00000444123
)
(Hypothetical short protein.)
genome : 116,510,139 - 116,528,969 (18,831)
query : 1 - 583 (583/583)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 8, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171305)
HIX0171305
HIT000537417 (
ENST00000439483
)
(Hypothetical short protein.)
genome : 116,510,197 - 116,525,906 (15,710)
query : 1 - 369 (369/369)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 5.5, cyto 4.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171305)
HIX0219458
HIT000049871
(
AK130600
)
Representative transcript
(Bud13 family protein.)
genome : 116,628,194 - 116,629,687 (1,494)
query : 1 - 1,490 (1,490/1,490)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
InterPro :
IPR018609 : Bud13
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219458)
HIX0219480
HIT000429934
(
AK311068
)
Representative transcript
(Conserved hypothetical protein.)
genome : 116,631,167 - 116,643,703 (12,537)
query : 1 - 1,561 (1,561/1,561)
5 exons
identity = 0.999
3'(1.000;0.997;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219480)
HIX0171515
HIT000537038 (
ENST00000439104
)
(Hypothetical short protein.)
genome : 116,644,105 - 116,644,921 (817)
query : 1 - 419 (419/419)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171515)
HIX0036381
HIT000094015
(
BC035670
)
Representative transcript
(Hypothetical short protein.)
genome : 116,644,518 - 116,645,976 (1,459)
query : 1 - 1,457 (1,457/1,500)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, cyto 9.5, cyto_nucl 9.5, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036381)
HIX0036381
HIT000347685 (
ENST00000366405
)
(Conserved hypothetical protein.)
genome : 116,645,826 - 116,646,592 (767)
query : 1 - 598 (598/598)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036381)
HIX0010156
HIT000104024 (
ENST00000227322
)
(Zinc finger protein ZPR1; Zinc finger protein 259;)
genome : 116,648,436 - 116,658,766 (10,331)
query : 1 - 2,645 (2,645/2,645)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 6, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010156)
HIX0010156
HIT000542869 (
ENST00000444935
)
(Zinc finger protein ZPR1; Zinc finger protein 259;)
genome : 116,648,436 - 116,658,705 (10,270)
query : 1 - 2,497 (2,497/2,497)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12.5, nucl 5.5, cysk 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010156)
HIX0010156
HIT000527154 (
ENST00000429220
)
(Zinc finger protein ZPR1; Zinc finger protein 259;)
genome : 116,648,436 - 116,658,695 (10,260)
query : 1 - 2,364 (2,364/2,364)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, nucl 5.5, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010156)
HIX0010156
HIT000339851
(
BC111028
)
(Zinc finger protein ZPR1; Zinc finger protein 259;)
genome : 116,649,276 - 116,658,726 (9,451)
query : 1 - 1,765 (1,765/1,895)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004457 : Zinc finger, ZPR1-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 6, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010156)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720477
Mus
sp. (Mouse) : AK168061
Danio
sp. (Zebrafish) : BC052111
Bos
sp. (Cow) : BC109540
Tetraodon
sp. (Tetraodon) : CR650644
Canis
sp. (Dog) : ENSCAFT00000021222
Equus
sp. (Horse) : ENSECAT00000011763
Pongo
sp. (Orangutan) : ENSPPYT00000029393
Rattus
sp. (Rat) : XM_001064960
Pan
sp. (Chimpanzee) : XM_001152978
Monodelphis
sp. (Opossum) : XM_001380848
Macaca
sp. (Macaque) : XR_010915
HIX0010156
HIT000031823
(
BC004256
)
(Zinc finger protein ZPR1; Zinc finger protein 259;)
genome : 116,649,276 - 116,658,709 (9,434)
query : 1 - 1,748 (1,748/1,818)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004457 : Zinc finger, ZPR1-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 6, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010156)
HIX0010156
HIT000062493
(
AF019767
)
(Zinc finger protein ZPR1; Zinc finger protein 259;)
genome : 116,649,276 - 116,658,726 (9,451)
query : 9 - 1,773 (1,765/1,817)
14 exons
identity = 0.997
3'(0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004457 : Zinc finger, ZPR1-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 6, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010156)
HIX0010156
HIT000087734
(
BC011929
)
(Zinc finger protein ZPR1; Zinc finger protein 259;)
genome : 116,649,276 - 116,658,718 (9,443)
query : 1 - 1,756 (1,756/1,793)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004457 : Zinc finger, ZPR1-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 6, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010156)
HIX0010156
HIT000037959
(
BC017349
)
Representative transcript
(Zinc finger protein ZPR1; Zinc finger protein 259;)
genome : 116,649,276 - 116,658,739 (9,464)
query : 1 - 1,778 (1,778/1,810)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004457 : Zinc finger, ZPR1-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 6, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010156)
HIX0010156
HIT000200693 (
NM_003904
)
(Zinc finger protein ZPR1; Zinc finger protein 259;)
genome : 116,649,276 - 116,658,739 (9,464)
query : 1 - 1,778 (1,778/1,810)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 6, cysk 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010156)
HIX0010156
HIT000035702
(
BC012162
)
(Zinc finger protein ZPR1; Zinc finger protein 259;)
genome : 116,649,276 - 116,658,722 (9,447)
query : 1 - 1,761 (1,761/1,781)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004457 : Zinc finger, ZPR1-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 6, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010156)
HIX0010156
HIT000037981
(
BC017380
)
(Zinc finger protein ZPR1; Zinc finger protein 259;)
genome : 116,649,276 - 116,658,722 (9,447)
query : 1 - 1,761 (1,761/1,781)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004457 : Zinc finger, ZPR1-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 6, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010156)
HIX0010156
HIT000495851
(
AK301227
)
(Zinc finger protein ZPR1; Zinc finger protein 259;)
genome : 116,649,578 - 116,658,702 (9,125)
query : 1 - 1,439 (1,439/1,439)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004457 : Zinc finger, ZPR1-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 6, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010156)
HIX0010156
HIT000099562
(
BT006642
)
(Zinc finger protein ZPR1; Zinc finger protein 259;)
genome : 116,649,641 - 116,658,706 (9,066)
query : 1 - 1,380 (1,380/1,380)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004457 : Zinc finger, ZPR1-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 6, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010156)
HIX0010156
HIT000547364 (
ENST00000449430
)
(Zinc finger protein ZPR1; Zinc finger protein 259;)
genome : 116,652,874 - 116,656,559 (3,686)
query : 1 - 691 (691/691)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010156)
HIX0010156
HIT000529907 (
ENST00000431973
)
(Zinc finger protein ZPR1; Zinc finger protein 259;)
genome : 116,656,294 - 116,658,614 (2,321)
query : 1 - 508 (508/508)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010156)
HIX0010156
HIT000523725 (
ENST00000425791
)
(Zinc finger protein ZPR1;)
genome : 116,656,512 - 116,658,755 (2,244)
query : 1 - 603 (603/603)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 6.5, cyto_nucl 6, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010156)
HIX0010156
HIT000601304 (
ENST00000498065
)
(Zinc finger protein ZPR1; Zinc finger protein 259;)
genome : 116,657,241 - 116,658,052 (812)
query : 1 - 425 (425/425)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, cyto 10, mito 10, cyto_mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010156)
HIX0010156
HIT000590751 (
ENST00000487030
)
(Zinc finger protein ZPR1; Zinc finger protein 259;)
genome : 116,657,728 - 116,658,703 (976)
query : 1 - 554 (554/554)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 12.5, cyto_nucl 9.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010156)
HIX0035880
HIT000211560 (
NM_052968
)
(Apolipoprotein A-V; Apo-AV; ApoA-V; Apolipoprotein A5; Regeneration-associated protein 3; Precursor;)
genome : 116,660,086 - 116,663,136 (3,051)
query : 1 - 1,932 (1,932/1,954)
4 exons
identity = 0.999
3'(1.000;1.000;0.988;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, lyso 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035880)
HIX0035880
HIT000654380 (
NM_001166598
)
(Apolipoprotein A-V; Apo-AV; ApoA-V; Apolipoprotein A5; Regeneration-associated protein 3; Precursor;)
genome : 116,660,086 - 116,663,136 (3,051)
query : 1 - 1,908 (1,908/1,930)
4 exons
identity = 0.999
3'(1.000;1.000;0.982;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, lyso 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035880)
HIX0035880
HIT000073796
(
AF202889
)
Representative transcript
(Apolipoprotein A-V; Apo-AV; ApoA-V; Apolipoprotein A5; Regeneration-associated protein 3; Precursor;)
genome : 116,660,086 - 116,662,584 (2,499)
query : 1 - 1,867 (1,867/1,889)
3 exons
identity = 0.999
3'(0.999;1.000;0.982)5'
coverage = 1.000
InterPro :
IPR000074 : Apolipoprotein A/E
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, lyso 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035880)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC011198
Rattus
sp. (Rat) : BC089780
Danio
sp. (Zebrafish) : BC107620
Bos
sp. (Cow) : BC123517
Canis
sp. (Dog) : ENSCAFT00000021156
Equus
sp. (Horse) : ENSECAT00000000348
Oryzias
sp. (Medaka) : ENSORLT00000017520
Macaca
sp. (Macaque) : XM_001090194
Monodelphis
sp. (Opossum) : XM_001380842
Gallus
sp. (Chicken) : XM_417939
Pan
sp. (Chimpanzee) : XR_024249
HIX0035880
HIT000104042 (
ENST00000227665
)
(Apolipoprotein A-V; Apo-AV; ApoA-V; Apolipoprotein A5; Regeneration-associated protein 3; Precursor;)
genome : 116,660,083 - 116,662,611 (2,529)
query : 1 - 1,897 (1,897/1,897)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, lyso 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035880)
HIX0035880
HIT000641544 (
ENST00000542499
)
(Apolipoprotein A-V; Apo-AV; ApoA-V; Apolipoprotein A5; Regeneration-associated protein 3; Precursor;)
genome : 116,660,089 - 116,663,136 (3,048)
query : 1 - 1,929 (1,929/1,929)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, lyso 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035880)
HIX0035880
HIT000252793
(
AY358749
)
(Apolipoprotein A-V; Apo-AV; ApoA-V; Apolipoprotein A5; Regeneration-associated protein 3; Precursor;)
genome : 116,660,631 - 116,662,587 (1,957)
query : 1 - 1,325 (1,325/1,371)
3 exons
identity = 0.997
3'(0.997;1.000;0.983)5'
coverage = 1.000
InterPro :
IPR000074 : Apolipoprotein A/E
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035880)
HIX0035880
HIT000073797
(
AF202890
)
(Apolipoprotein A-V; Apo-AV; ApoA-V; Apolipoprotein A5; Regeneration-associated protein 3; Precursor;)
genome : 116,660,631 - 116,662,584 (1,954)
query : 1 - 1,322 (1,322/1,349)
3 exons
identity = 0.998
3'(0.999;1.000;0.982)5'
coverage = 1.000
InterPro :
IPR000074 : Apolipoprotein A/E
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, lyso 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035880)
HIX0035880
HIT000426913
(
AK308047
)
(Apolipoprotein A-V; Apo-AV; ApoA-V; Apolipoprotein A5; Regeneration-associated protein 3; Precursor;)
genome : 116,660,720 - 116,663,136 (2,417)
query : 1 - 1,735 (1,735/1,735)
2 exons
identity = 0.997
3'(0.997;1.000)5'
coverage = 1.000
InterPro :
IPR000074 : Apolipoprotein A/E
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 14.5, nucl 12.5, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035880)
HIX0035880
HIT000425536
(
AK292739
)
(Apolipoprotein A-V; Apo-AV; ApoA-V; Apolipoprotein A5; Regeneration-associated protein 3; Precursor;)
genome : 116,660,747 - 116,662,587 (1,841)
query : 10 - 1,218 (1,209/1,218)
3 exons
identity = 0.998
3'(0.999;1.000;0.983)5'
coverage = 0.993
InterPro :
IPR000074 : Apolipoprotein A/E
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, lyso 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035880)
HIX0035880
HIT000337135
(
BC101787
)
(Apolipoprotein A-V; Apo-AV; ApoA-V; Apolipoprotein A5; Regeneration-associated protein 3; Precursor;)
genome : 116,660,786 - 116,662,612 (1,827)
query : 1 - 1,195 (1,195/1,195)
3 exons
identity = 0.998
3'(0.999;1.000;0.988)5'
coverage = 1.000
InterPro :
IPR000074 : Apolipoprotein A/E
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, lyso 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035880)
HIX0035880
HIT000337137
(
BC101789
)
(Apolipoprotein A-V; Apo-AV; ApoA-V; Apolipoprotein A5; Regeneration-associated protein 3; Precursor;)
genome : 116,660,786 - 116,662,612 (1,827)
query : 1 - 1,195 (1,195/1,195)
3 exons
identity = 0.999
3'(1.000;1.000;0.988)5'
coverage = 1.000
InterPro :
IPR000074 : Apolipoprotein A/E
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, lyso 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035880)
HIX0035880
HIT000434095
(
AK315229
)
(Apolipoprotein A-V; Apo-AV; ApoA-V; Apolipoprotein A5; Regeneration-associated protein 3; Precursor;)
genome : 116,660,844 - 116,662,587 (1,744)
query : 10 - 1,121 (1,112/1,121)
3 exons
identity = 0.998
3'(0.999;1.000;0.983)5'
coverage = 0.992
InterPro :
IPR000074 : Apolipoprotein A/E
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, lyso 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035880)
HIX0035880
HIT000531003 (
ENST00000433069
)
(Apolipoprotein A-V; Apo-AV; ApoA-V; Apolipoprotein A5; Regeneration-associated protein 3; Precursor;)
genome : 116,661,459 - 116,663,127 (1,669)
query : 1 - 526 (526/526)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035880)
HIX0171577
HIT000555680 (
ENST00000457746
)
(Hypothetical short protein.)
genome : 116,683,920 - 116,684,719 (800)
query : 1 - 333 (333/333)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171577)
HIX0036005
HIT000194232
(
M13654
)
(Apolipoprotein A/E family protein.)
genome : 116,691,417 - 116,693,958 (2,542)
query : 1 - 1,404 (1,404/1,416)
3 exons
identity = 0.994
3'(0.993;0.992;1.000)5'
coverage = 1.000
InterPro :
IPR000074 : Apolipoprotein A/E
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036005)
HIX0036005
HIT000197517 (
NM_000482
)
(Apolipoprotein A/E family protein.)
genome : 116,691,418 - 116,694,011 (2,594)
query : 1 - 1,460 (1,460/1,460)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, E.R. 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036005)
HIX0036005
HIT000194343
(
M14566
)
(Apolipoprotein A/E family protein.)
genome : 116,691,418 - 116,693,490 (2,073)
query : 1 - 1,292 (1,292/1,292)
2 exons
identity = 0.993
3'(0.993;0.991)5'
coverage = 1.000
InterPro :
IPR000074 : Apolipoprotein A/E
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 16.5, nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036005)
HIX0036005
HIT000194079
(
M10373
)
(Apolipoprotein A/E family protein.)
genome : 116,691,418 - 116,692,371 (954)
query : 1 - 954 (954/954)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
InterPro :
IPR000074 : Apolipoprotein A/E
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 8, cyto_mito 8, cyto_pero 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036005)
HIX0036005
HIT000311588 (
ENST00000357780
)
(Apolipoprotein A/E family protein.)
genome : 116,691,419 - 116,694,022 (2,604)
query : 1 - 1,470 (1,470/1,470)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, E.R. 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036005)
HIX0036005
HIT000321383
(
X13629
)
Representative transcript
(Apolipoprotein A/E family protein.)
genome : 116,691,419 - 116,693,952 (2,534)
query : 1 - 1,396 (1,396/1,396)
3 exons
identity = 0.995
3'(0.995;0.992;1.000)5'
coverage = 1.000
InterPro :
IPR000074 : Apolipoprotein A/E
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, E.R. 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036005)
HIX0036005
HIT000387047
(
BC113594
)
(Apolipoprotein A/E family protein.)
genome : 116,691,457 - 116,693,936 (2,480)
query : 1 - 1,346 (1,346/1,346)
3 exons
identity = 0.998
3'(0.998;0.992;1.000)5'
coverage = 1.000
InterPro :
IPR000074 : Apolipoprotein A/E
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, E.R. 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036005)
HIX0036005
HIT000387049
(
BC113596
)
(Apolipoprotein A/E family protein.)
genome : 116,691,457 - 116,693,936 (2,480)
query : 1 - 1,342 (1,342/1,342)
3 exons
identity = 0.996
3'(0.996;0.992;1.000)5'
coverage = 1.000
InterPro :
IPR000074 : Apolipoprotein A/E
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, E.R. 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036005)
HIX0036005
HIT000265271
(
BC074764
)
(Apolipoprotein A/E family protein.)
genome : 116,691,543 - 116,693,945 (2,403)
query : 1 - 1,269 (1,269/1,269)
3 exons
identity = 0.998
3'(0.999;0.992;0.989)5'
coverage = 1.000
InterPro :
IPR000074 : Apolipoprotein A/E
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, E.R. 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036005)
HIX0010157
HIT000531711 (
ENST00000433777
)
(Apolipoprotein C-III; Apo-CIII; ApoC-III; Apolipoprotein C3; Precursor;)
genome : 116,700,422 - 116,701,598 (1,177)
query : 1 - 359 (359/359)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010157)
HIX0010157
HIT000320891
(
X01388
)
Representative transcript
(Apolipoprotein C-III; Apo-CIII; ApoC-III; Apolipoprotein C3; Precursor;)
genome : 116,700,620 - 116,703,787 (3,168)
query : 23 - 558 (536/558)
4 exons
identity = 0.998
5'(0.973;1.000;1.000;1.000)3'
coverage = 0.961
InterPro :
IPR008403 : Apolipoprotein CIII
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010157)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK002908
Bos
sp. (Cow) : BC111661
Monodelphis
sp. (Opossum) : ENSMODT00000017567
Pongo
sp. (Orangutan) : ENSPPYT00000004647
Pan
sp. (Chimpanzee) : ENSPTRT00000008022
Canis
sp. (Dog) : M17178
Macaca
sp. (Macaque) : XM_001090312
Bos
sp. (Cow) : XR_028456
HIX0010157
HIT000104044 (
ENST00000227667
)
(Apolipoprotein C-III; Apo-CIII; ApoC-III; Apolipoprotein C3; Precursor;)
genome : 116,700,608 - 116,703,788 (3,181)
query : 1 - 550 (550/550)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010157)
HIX0010157
HIT000197092 (
NM_000040
)
(Apolipoprotein C-III; Apo-CIII; ApoC-III; Apolipoprotein C3; Precursor;)
genome : 116,700,624 - 116,703,787 (3,164)
query : 1 - 533 (533/533)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010157)
HIX0010157
HIT000388278
(
BC121081
)
(Apolipoprotein C-III; Apo-CIII; ApoC-III; Apolipoprotein C3; Precursor;)
genome : 116,700,624 - 116,703,768 (3,145)
query : 1 - 514 (514/514)
4 exons
identity = 0.994
5'(1.000;1.000;0.992;0.993)3'
coverage = 1.000
InterPro :
IPR008403 : Apolipoprotein CIII
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010157)
HIX0010157
HIT000391151
(
BC134419
)
(Apolipoprotein C-III; Apo-CIII; ApoC-III; Apolipoprotein C3; Precursor;)
genome : 116,700,624 - 116,703,768 (3,145)
query : 1 - 514 (514/514)
4 exons
identity = 0.994
5'(1.000;1.000;0.992;0.993)3'
coverage = 1.000
InterPro :
IPR008403 : Apolipoprotein CIII
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010157)
HIX0010157
HIT000040390
(
BC027977
)
(Apolipoprotein C-III; Apo-CIII; ApoC-III; Apolipoprotein C3; Precursor;)
genome : 116,700,626 - 116,703,788 (3,163)
query : 1 - 531 (531/556)
4 exons
identity = 0.996
5'(1.000;1.000;1.000;0.994)3'
coverage = 1.000
InterPro :
IPR008403 : Apolipoprotein CIII
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010157)
HIX0010157
HIT000356625 (
ENST00000375345
)
(Apolipoprotein C-III; Apo-CIII; ApoC-III; Apolipoprotein C3; Precursor;)
genome : 116,700,631 - 116,703,788 (3,158)
query : 1 - 604 (604/604)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010157)
HIX0010157
HIT000574632 (
ENST00000470144
)
(Apolipoprotein C-III; Apo-CIII; ApoC-III; Apolipoprotein C3; Precursor;)
genome : 116,701,283 - 116,701,816 (534)
query : 17 - 269 (253/269)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.941
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010157)
HIX0010157
HIT000195257
(
M28613
)
(Apolipoprotein C-III; Apo-CIII; ApoC-III; Apolipoprotein C3; Precursor;)
genome : 116,701,283 - 116,703,789 (2,507)
query : 15 - 519 (505/519)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.973
InterPro :
IPR008403 : Apolipoprotein CIII
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010157)
HIX0010157
HIT000195258
(
M28614
)
(Apolipoprotein C-III; Apo-CIII; ApoC-III; Apolipoprotein C3; Precursor;)
genome : 116,701,283 - 116,703,789 (2,507)
query : 15 - 519 (505/519)
3 exons
identity = 0.994
5'(1.000;0.992;0.994)3'
coverage = 0.973
InterPro :
IPR008403 : Apolipoprotein CIII
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010157)
HIX0010157
HIT000320871
(
X00567
)
(Apolipoprotein C-III; Apo-CIII; ApoC-III; Apolipoprotein C3; Precursor;)
genome : 116,701,299 - 116,703,787 (2,489)
query : 1 - 487 (487/487)
3 exons
identity = 0.998
5'(1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR008403 : Apolipoprotein CIII
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010157)
HIX0010157
HIT000320845
(
V01513
)
(Non-protein coding transcript.)
genome : 116,703,532 - 116,703,783 (252)
query : 1 - 252 (252/252)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010157)
HIX0010159
HIT000339461_03
(
BC110286
)
Representative transcript
(Apolipoprotein A-I; Apo-AI; ApoA-I; Apolipoprotein A1; Contains: Truncated apolipoprotein A-I; Apolipoprotein A-I(1-242); Precursor;)
genome : 116,706,469 - 116,708,361 (1,893)
query : 1 - 920 (920/1,009)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR000074 : Apolipoprotein A/E
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010159)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK131864
Bos
sp. (Cow) : BC140619
Gallus
sp. (Chicken) : CR386713
Tetraodon
sp. (Tetraodon) : CR734025
Gallus
sp. (Chicken) : ENSGALT00000017628
Pongo
sp. (Orangutan) : ENSPPYT00000004648
Macaca
sp. (Macaque) : M15411
Pan
sp. (Chimpanzee) : XM_001153452
Monodelphis
sp. (Opossum) : XM_001380830
Equus
sp. (Horse) : XM_001502469
Canis
sp. (Dog) : XM_536564
HIX0010159
HIT000032425_03
(
BC005380
)
(Apolipoprotein A-I; Apo-AI; ApoA-I; Apolipoprotein A1; Contains: Truncated apolipoprotein A-I; Apolipoprotein A-I(1-242); Precursor;)
genome : 116,706,468 - 116,708,125 (1,658)
query : 17 - 898 (882/926)
3 exons
identity = 0.999
3'(0.998;1.000;1.000)5'
coverage = 0.982
InterPro :
IPR000074 : Apolipoprotein A/E
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010159)
HIX0010159
HIT000320913_03
(
X02162
)
(Apolipoprotein A-I; Apo-AI; ApoA-I; Apolipoprotein A1; Contains: Truncated apolipoprotein A-I; Apolipoprotein A-I(1-242); Precursor;)
genome : 116,706,467 - 116,708,125 (1,659)
query : 65 - 947 (883/965)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.915
InterPro :
IPR000074 : Apolipoprotein A/E
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010159)
HIX0010159
HIT000104714_03 (
ENST00000236850
)
(Apolipoprotein A-I; Apo-AI; ApoA-I; Apolipoprotein A1; Contains: Truncated apolipoprotein A-I; Apolipoprotein A-I(1-242); Precursor;)
genome : 116,706,467 - 116,708,666 (2,200)
query : 1 - 1,227 (1,227/1,227)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010159)
HIX0010159
HIT000356603_03 (
ENST00000375323
)
(Apolipoprotein A-I; Apo-AI; ApoA-I; Apolipoprotein A1; Contains: Truncated apolipoprotein A-I; Apolipoprotein A-I(1-242); Precursor;)
genome : 116,706,467 - 116,708,330 (1,864)
query : 1 - 1,088 (1,088/1,088)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010159)
HIX0010159
HIT000356609_03 (
ENST00000375329
)
(Apolipoprotein A-I; Apo-AI; ApoA-I; Apolipoprotein A1; Contains: Truncated apolipoprotein A-I; Apolipoprotein A-I(1-242); Precursor;)
genome : 116,706,467 - 116,708,326 (1,860)
query : 1 - 927 (927/927)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010159)
HIX0010159
HIT000313011_03 (
ENST00000359492
)
(Apolipoprotein A-I; Apo-AI; ApoA-I; Apolipoprotein A1; Contains: Truncated apolipoprotein A-I; Apolipoprotein A-I(1-242); Precursor;)
genome : 116,706,467 - 116,708,325 (1,859)
query : 1 - 932 (932/932)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010159)
HIX0010159
HIT000356600_03 (
ENST00000375320
)
(Apolipoprotein A-I; Apo-AI; ApoA-I; Apolipoprotein A1; Contains: Truncated apolipoprotein A-I; Apolipoprotein A-I(1-242); Precursor;)
genome : 116,706,467 - 116,708,302 (1,836)
query : 1 - 940 (940/940)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010159)
HIX0010159
HIT000197091_03 (
NM_000039
)
(Apolipoprotein A-I; Apo-AI; ApoA-I; Apolipoprotein A1; Contains: Truncated apolipoprotein A-I; Apolipoprotein A-I(1-242); Precursor;)
genome : 116,706,469 - 116,708,125 (1,657)
query : 17 - 897 (881/897)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.982
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010159)
HIX0010159
HIT000195194_03
(
M27875
)
(Apolipoprotein A-I; Apo-AI; ApoA-I; Apolipoprotein A1; Contains: Truncated apolipoprotein A-I; Apolipoprotein A-I(1-242); Precursor;)
genome : 116,706,469 - 116,708,122 (1,654)
query : 1 - 878 (878/878)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000074 : Apolipoprotein A/E
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010159)
HIX0010159
HIT000195303_03
(
M29068
)
(Apolipoprotein A-I; Apo-AI; ApoA-I; Apolipoprotein A1; Contains: Truncated apolipoprotein A-I; Apolipoprotein A-I(1-242); Precursor;)
genome : 116,706,469 - 116,707,859 (1,391)
query : 4 - 805 (802/805)
2 exons
identity = 0.986
3'(1.000;0.924)5'
coverage = 0.996
InterPro :
IPR000074 : Apolipoprotein A/E
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010159)
HIX0010159
HIT000425028_03
(
AK292231
)
(Apolipoprotein A-I; Apo-AI; ApoA-I; Apolipoprotein A1; Contains: Truncated apolipoprotein A-I; Apolipoprotein A-I(1-242); Precursor;)
genome : 116,706,470 - 116,708,125 (1,656)
query : 19 - 898 (880/898)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.980
InterPro :
IPR000074 : Apolipoprotein A/E
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010159)
HIX0010159
HIT000320870_03
(
X00566
)
(Apolipoprotein A-I; Apo-AI; ApoA-I; Apolipoprotein A1; Contains: Truncated apolipoprotein A-I; Apolipoprotein A-I(1-242); Precursor;)
genome : 116,706,470 - 116,708,125 (1,656)
query : 14 - 893 (880/893)
3 exons
identity = 0.999
3'(0.998;1.000;1.000)5'
coverage = 0.985
InterPro :
IPR000074 : Apolipoprotein A/E
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010159)
HIX0010159
HIT000194130_03
(
M11791
)
(Apolipoprotein A-I; Apo-AI; ApoA-I; Apolipoprotein A1; Contains: Truncated apolipoprotein A-I; Apolipoprotein A-I(1-242); Precursor;)
genome : 116,706,524 - 116,708,103 (1,580)
query : 1 - 804 (804/804)
3 exons
identity = 0.998
3'(0.997;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000074 : Apolipoprotein A/E
GO :
0005576 : Cellular Component : extracellular region
0006869 : Biological Process : lipid transport
0008289 : Molecular Function : lipid binding
0042157 : Biological Process : lipoprotein metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010159)
HIX0171531
HIT000542134 (
ENST00000444200
)
(Conserved hypothetical protein.)
genome : 116,706,833 - 116,726,445 (19,613)
query : 1 - 563 (563/563)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14.5, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171531)
HIX0201591
HIT000209768 (
NM_025164
)
(Serine/threonine-protein kinase SIK3; EC=2.7.11.1; Salt-inducible kinase 3; SIK-3; Serine/threonine-protein kinase QSK;)
genome : 116,714,118 - 116,968,993 (254,876)
query : 1 - 6,069 (6,069/6,072)
24 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.951;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11, nucl 8.5, pero 5.5,
mito_pero 4.83333, mito 3, E.R._mito 2.33333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000266130
(
BC086858
)
(Serine/threonine-protein kinase SIK3.)
genome : 116,714,131 - 116,730,156 (16,026)
query : 1 - 3,747 (3,747/3,763)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;0.999;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12.1667, cyto 8, mito 6,
cyto_pero 5.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000356580 (
ENST00000375300
)
(Serine/threonine-protein kinase SIK3; EC=2.7.11.1; Salt-inducible kinase 3; SIK-3; Serine/threonine-protein kinase QSK;)
genome : 116,714,118 - 116,969,137 (255,020)
query : 1 - 6,213 (6,213/6,213)
24 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.951;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R._mito 8.16667, E.R. 8, cyto 7, mito_pero 5.33333,
nucl 5, mito 4, pero 4, plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000543111 (
ENST00000445177
)
(Serine/threonine-protein kinase SIK3.)
genome : 116,714,118 - 116,969,111 (254,994)
query : 1 - 6,331 (6,331/6,331)
25 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.951;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 8, cyto 7, extr_plas 5.5, plas 4.5,
mito_pero 3.83333, extr 3.5, cyto_golg 3.5, E.R._mito 3.16667, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000591989 (
ENST00000488337
)
(Serine/threonine-protein kinase SIK3.)
genome : 116,714,118 - 116,740,967 (26,850)
query : 1 - 4,220 (4,220/4,220)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, cyto_mito 12.6667, cyto 10.5,
cyto_pero 6.83333, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000113506 (
ENST00000292055
)
(Serine/threonine-protein kinase SIK3; EC=2.7.11.1; Salt-inducible kinase 3; SIK-3; Serine/threonine-protein kinase QSK;)
genome : 116,714,120 - 116,968,993 (254,874)
query : 1 - 6,067 (6,067/6,067)
24 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.951;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11, nucl 8.5, pero 5.5,
mito_pero 4.83333, mito 3, E.R._mito 2.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000356568 (
ENST00000375288
)
(Serine/threonine-protein kinase SIK3.)
genome : 116,714,120 - 116,968,993 (254,874)
query : 1 - 5,777 (5,777/5,777)
23 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.951;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 11.5, mito 7, mito_pero 5.66667,
E.R._mito 5.16667, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000329262
(
AB209327
)
(Serine/threonine-protein kinase SIK3.)
genome : 116,714,120 - 116,747,073 (32,954)
query : 1 - 5,209 (5,209/5,209)
17 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;0.999;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.951;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR015940 : Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 18, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000552839 (
ENST00000454905
)
(Serine/threonine-protein kinase SIK3.)
genome : 116,715,900 - 116,718,324 (2,425)
query : 20 - 294 (275/294)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.935
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 8, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000261262
(
BC063887
)
(Serine/threonine-protein kinase SIK3.)
genome : 116,716,127 - 116,740,967 (24,841)
query : 1 - 2,211 (2,211/2,239)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, cyto_mito 12.6667, cyto 10.5,
cyto_pero 6.83333, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000000716
(
AB023216
)
Representative transcript
(Serine/threonine-protein kinase SIK3; EC=2.7.11.1; Salt-inducible kinase 3; SIK-3; Serine/threonine-protein kinase QSK;)
genome : 116,716,128 - 116,969,117 (252,990)
query : 278 - 4,460 (4,183/4,460)
24 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.951;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.985)5'
coverage = 0.938
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11, nucl 8.5, pero 5.5,
mito_pero 4.83333, mito 3, E.R._mito 2.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC063268
Bos
sp. (Cow) : ENSBTAT00000020116
Danio
sp. (Zebrafish) : ENSDART00000093359
Equus
sp. (Horse) : ENSECAT00000010836
Macaca
sp. (Macaque) : ENSMMUT00000022673
Oryzias
sp. (Medaka) : ENSORLT00000019802
Pongo
sp. (Orangutan) : ENSPPYT00000004650
Pan
sp. (Chimpanzee) : ENSPTRT00000055185
Tetraodon
sp. (Tetraodon) : GSTENT00012259001
Takifugu
sp. (Fugu) : SINFRUT00000162411
Monodelphis
sp. (Opossum) : XM_001380826
Canis
sp. (Dog) : XM_536563
HIX0201591
HIT000042711
(
AK122838
)
(Serine/threonine-protein kinase SIK3; EC=2.7.11.1; Salt-inducible kinase 3; SIK-3; Serine/threonine-protein kinase QSK;)
genome : 116,716,128 - 116,735,784 (19,657)
query : 1 - 3,459 (3,459/3,459)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.999)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 17, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000570120 (
ENST00000465421
)
(Serine/threonine-protein kinase SIK3; EC=2.7.11.1; Salt-inducible kinase 3; SIK-3; Serine/threonine-protein kinase QSK;)
genome : 116,716,128 - 116,735,784 (19,657)
query : 1 - 3,459 (3,459/3,459)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 17, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000005576
(
AK022302
)
(Serine/threonine-protein kinase SIK3.)
genome : 116,716,128 - 116,730,156 (14,029)
query : 1 - 1,752 (1,752/1,752)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12.1667, cyto 8, mito 6,
cyto_pero 5.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000389875
(
BC128510
)
(Serine/threonine-protein kinase SIK3.)
genome : 116,716,309 - 116,968,993 (252,685)
query : 1 - 3,698 (3,698/3,703)
24 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.951;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 10.5, cyto 5.5, plas 5, mito 3,
pero 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000389876
(
BC128511
)
(Serine/threonine-protein kinase SIK3.)
genome : 116,716,309 - 116,968,987 (252,679)
query : 1 - 3,816 (3,816/3,821)
25 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.951;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR008271 : Serine/threonine-protein kinase, active site
IPR015940 : Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, nucl 7, mito_pero 6.5, pero 6, cyto_golg 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000641652 (
ENST00000542607
)
(Serine/threonine-protein kinase SIK3.)
genome : 116,716,307 - 116,968,993 (252,687)
query : 1 - 3,700 (3,700/3,700)
24 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.951;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 10.5, cyto 5.5, plas 5, mito 3,
pero 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000532249 (
ENST00000434315
)
(Serine/threonine-protein kinase SIK3; EC=2.7.11.1; Salt-inducible kinase 3; SIK-3; Serine/threonine-protein kinase QSK;)
genome : 116,716,307 - 116,968,987 (252,681)
query : 1 - 3,818 (3,818/3,818)
25 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.951;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 9, cyto_nucl 8, nucl 5, extr 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000544855 (
ENST00000446921
)
(Serine/threonine-protein kinase SIK3.)
genome : 116,716,309 - 116,969,153 (252,845)
query : 1 - 3,858 (3,858/3,858)
24 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.951;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R._mito 7.16667, cyto 7, E.R. 6, mito_pero 4.83333,
nucl 4, mito 4, cyto_golg 4, plas 3.5, extr_plas 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000513475 (
ENST00000415541
)
(Serine/threonine-protein kinase SIK3.)
genome : 116,716,309 - 116,968,987 (252,679)
query : 1 - 3,816 (3,816/3,816)
25 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.951;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, nucl 7, mito_pero 6.5, pero 6, cyto_golg 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000255693
(
AY598338
)
(Serine/threonine-protein kinase SIK3.)
genome : 116,717,112 - 116,730,153 (13,042)
query : 1 - 1,518 (1,518/1,518)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 9.5, cyto_nucl 9.16667, nucl 7.5,
cyto_pero 6.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000051425
(
BC035583
)
(Serine/threonine-protein kinase SIK3.)
genome : 116,727,633 - 116,732,100 (4,468)
query : 1 - 2,234 (2,234/2,267)
3 exons
identity = 1.000
3'(0.999;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 6, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000584486 (
ENST00000480468
)
(Serine/threonine-protein kinase SIK3.)
genome : 116,727,630 - 116,732,100 (4,471)
query : 1 - 2,237 (2,237/2,237)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000584249 (
ENST00000480222
)
(Serine/threonine-protein kinase SIK3.)
genome : 116,738,404 - 116,744,388 (5,985)
query : 1 - 665 (665/665)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 14, cyto 7.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000511487 (
ENST00000413553
)
(Serine/threonine-protein kinase SIK3.)
genome : 116,739,508 - 116,827,760 (88,253)
query : 1 - 3,054 (3,054/3,054)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.951;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 19, cyto_nucl 13, nucl 5, mito_pero 4.5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000577016 (
ENST00000472648
)
(Serine/threonine-protein kinase SIK3.)
genome : 116,745,874 - 116,746,229 (356)
query : 1 - 250 (250/267)
2 exons
identity = 0.984
3'(1.000;0.972)5'
coverage = 0.936
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 11, cyto_nucl 11, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0017564
HIT000014628
(
AK058022
)
Representative transcript
(Activating molecule in BECN1-regulated autophagy protein 1 isoform 1.)
genome : 116,756,762 - 116,761,437 (4,676)
query : 5 - 2,475 (2,471/2,475)
3 exons
identity = 0.996
5'(0.998;0.971;0.999)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 8, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017564)
HIX0017564
HIT000552766 (
ENST00000454832
)
(Conserved hypothetical protein.)
genome : 116,756,762 - 116,761,437 (4,676)
query : 1 - 2,472 (2,472/2,472)
3 exons
identity = 0.998
5'(0.999;0.983;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017564)
HIX0201591
HIT000600344 (
ENST00000497049
)
(Serine/threonine-protein kinase SIK3.)
genome : 116,764,561 - 116,827,780 (63,220)
query : 1 - 715 (715/715)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 24, extr 3, mito 2, pero 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000388385
(
BC121188
)
(Serine/threonine-protein kinase SIK3.)
genome : 116,775,429 - 116,969,024 (193,596)
query : 1 - 800 (800/922)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 11.5, extr 7, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201591
HIT000589170 (
ENST00000485363
)
(Serine/threonine-protein kinase SIK3.)
genome : 116,775,462 - 116,969,021 (193,560)
query : 1 - 764 (764/764)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 10, cyto_nucl 9, mito 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201591)
HIX0201788
HIT000349847_04 (
ENST00000368567
)
(Ribosomal protein S27e family protein.)
genome : 116,906,456 - 116,906,802 (347)
query : 4 - 350 (347/350)
1 exon
identity = 0.974
3'(0.974)5'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201788)
HIX0201788
HIT000635854_04 (
ENST00000536809
)
(Ribosomal protein S27e family protein.)
genome : 116,906,459 - 116,906,778 (320)
query : 3 - 322 (320/322)
1 exon
identity = 0.978
3'(0.978)5'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201788)
HIX0201788
HIT000637044_04 (
ENST00000537999
)
(Ribosomal protein S27e family protein.)
genome : 116,906,459 - 116,906,778 (320)
query : 3 - 322 (320/322)
1 exon
identity = 0.972
3'(0.972)5'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201788)
HIX0201788
HIT000349845_05 (
ENST00000368565
)
(Ribosomal protein S27e family protein.)
genome : 116,906,507 - 116,906,772 (266)
query : 1 - 266 (266/266)
1 exon
identity = 0.966
3'(0.966)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201788)
HIX0201788
HIT000536061 (
ENST00000438127
)
(Ribosomal protein S27e family protein.)
genome : 116,906,513 - 116,906,767 (255)
query : 1 - 255 (255/255)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 7, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201788)
HIX0201788
HIT000567919_06 (
ENST00000463110
)
(Ribosomal protein S27e family protein.)
genome : 116,906,513 - 116,906,767 (255)
query : 1 - 252 (252/252)
1 exon
identity = 0.957
3'(0.957)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 6, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201788)
HIX0201788
HIT000584865_05 (
ENST00000480875
)
(Ribosomal protein S27e family protein.)
genome : 116,906,513 - 116,906,767 (255)
query : 1 - 255 (255/255)
1 exon
identity = 0.953
3'(0.953)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201788)
HIX0201788
HIT000598757_04 (
ENST00000495392
)
(Ribosomal protein S27e family protein.)
genome : 116,906,513 - 116,906,767 (255)
query : 1 - 255 (255/255)
1 exon
identity = 0.976
3'(0.976)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201788)
HIX0201788
HIT000520391_04 (
ENST00000422457
)
(Ribosomal protein S27e family protein.)
genome : 116,906,514 - 116,906,767 (254)
query : 1 - 254 (254/254)
1 exon
identity = 0.972
3'(0.972)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201788)
HIX0201788
HIT000521150_04 (
ENST00000423216
)
(Ribosomal protein S27e family protein.)
genome : 116,906,515 - 116,906,767 (253)
query : 1 - 253 (253/253)
1 exon
identity = 0.964
3'(0.964)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201788)
HIX0201788
HIT000590699_03 (
ENST00000486977
)
(Ribosomal protein S27e family protein.)
genome : 116,906,516 - 116,906,767 (252)
query : 1 - 252 (252/252)
1 exon
identity = 0.960
3'(0.960)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201788)
HIX0035979
HIT000095686
(
BC039419
)
Representative transcript
(Conserved hypothetical protein.)
genome : 116,941,485 - 116,942,328 (844)
query : 1 - 845 (845/860)
1 exon
identity = 0.991
3'(0.991)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035979)
HIX0035979
HIT000097212
(
BC042385
)
(Conserved hypothetical protein.)
genome : 116,941,485 - 116,942,325 (841)
query : 3 - 844 (842/859)
1 exon
identity = 0.992
3'(0.992)5'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035979)
HIX0153983
HIT000393138
(
DQ656025
)
Representative transcript
(Conserved hypothetical protein.)
genome : 116,949,161 - 116,949,994 (834)
query : 15 - 849 (835/849)
1 exon
identity = 0.990
5'(0.990)3'
coverage = 0.984
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 7, cyto_nucl 6.5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0153983)
HIX0171529
HIT000540058 (
ENST00000442124
)
(Conserved hypothetical protein.)
genome : 116,969,703 - 116,978,886 (9,184)
query : 1 - 483 (483/483)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 14, extr 5, nucl 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171529)
HIX0171544
HIT000545085 (
ENST00000447151
)
(Conserved hypothetical protein.)
genome : 116,988,510 - 116,989,897 (1,388)
query : 1 - 681 (681/681)
3 exons
identity = 0.999
5'(1.000;1.000;0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 9, cyto 9, cyto_nucl 9, cyto_pero 7.66667,
mito 7, nucl 3.5, E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171544)
HIX0191666
HIT000627642 (
ENST00000528464
)
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Lymphoma proprotein convertase; Prohormone convertase 7; Proprotein convertase 7; PC7; Proprotein convertase 8; PC8; hPC8; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,006,244 - 117,009,298 (3,055)
query : 1 - 822 (822/822)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8, pero 6.5, mito_pero 5.66667, extr 5.5,
cyto_nucl 5.5, extr_plas 5.5, plas 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0191666)
HIX0191666
HIT000630697_01 (
ENST00000531573
)
(Hypothetical short protein.)
genome : 117,006,811 - 117,007,606 (796)
query : 1 - 562 (562/562)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, extr 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0191666)
HIX0191666
HIT000329950_03
(
AB231710
)
Representative transcript
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Lymphoma proprotein convertase; Prohormone convertase 7; Proprotein convertase 7; PC7; Proprotein convertase 8; PC8; hPC8; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,007,262 - 117,008,585 (1,324)
query : 1 - 247 (247/247)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002884 : Proprotein convertase, P
IPR008979 : Galactose-binding domain-like
IPR015500 : Peptidase S8, subtilisin-related
GO :
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 10.6667, nucl 8.5, cyto 7.5,
cyto_pero 6.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0191666)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720169
Oryzias
sp. (Medaka) : ENSORLT00000019690
Pongo
sp. (Orangutan) : ENSPPYT00000004651
Tetraodon
sp. (Tetraodon) : GSTENT00026811001
Takifugu
sp. (Fugu) : SINFRUT00000163741
HIX0191666
HIT000329951_03
(
AB231711
)
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Lymphoma proprotein convertase; Prohormone convertase 7; Proprotein convertase 7; PC7; Proprotein convertase 8; PC8; hPC8; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,007,262 - 117,008,585 (1,324)
query : 1 - 152 (152/152)
2 exons
identity = 0.993
5'(0.985;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0191666)
HIX0209854
HIT000624709 (
ENST00000525475
)
(Conserved hypothetical protein.)
genome : 117,014,607 - 117,014,907 (301)
query : 1 - 301 (301/301)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9.83333, extr 9, mito 9, cyto 8.5,
cyto_pero 5.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209854)
HIX0010160
pHIT000020665 ( pHIT000020665 )
(Platelet-activating factor acetylhydrolase IB subunit beta isoform a.)
genome : 117,014,949 - 117,038,415 (23,467)
query : 1 - 678 (678/678)
4 exons
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
CAGE tag :
H05BA44H0603
HIX0010160
HIT000627150 (
ENST00000527958
)
(Platelet-activating factor acetylhydrolase IB subunit beta; EC=3.1.1.47; PAF acetylhydrolase 30 kDa subunit; PAF-AH 30 kDa subunit; PAF-AH subunit beta; PAFAH subunit beta;)
genome : 117,014,983 - 117,041,761 (26,779)
query : 1 - 4,195 (4,195/4,195)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 11.5, extr 6, pero 3,
extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000655401 (
NM_001184748
)
(Platelet-activating factor acetylhydrolase IB subunit beta isoform d.)
genome : 117,015,000 - 117,047,591 (32,592)
query : 1 - 2,518 (2,518/2,537)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 12, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000517131 (
ENST00000419197
)
(Platelet-activating factor acetylhydrolase IB subunit beta isoform d.)
genome : 117,015,000 - 117,047,590 (32,591)
query : 1 - 2,517 (2,517/2,517)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 12, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000655399 (
NM_001184746
)
(Platelet-activating factor acetylhydrolase IB subunit beta isoform b.)
genome : 117,015,000 - 117,047,138 (32,139)
query : 1 - 1,195 (1,195/1,195)
7 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.994)3'
coverage = 1.000
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 10.5, extr 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000655400 (
NM_001184747
)
(Platelet-activating factor acetylhydrolase IB subunit beta isoform c.)
genome : 117,015,000 - 117,047,138 (32,139)
query : 1 - 1,070 (1,070/1,070)
6 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;0.994)3'
coverage = 1.000
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, extr 12, cyto_nucl 9, nucl 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000199461 (
NM_002572
)
(Platelet-activating factor acetylhydrolase IB subunit beta; EC=3.1.1.47; PAF acetylhydrolase 30 kDa subunit; PAF-AH 30 kDa subunit; PAF-AH subunit beta; PAFAH subunit beta;)
genome : 117,015,000 - 117,041,760 (26,761)
query : 1 - 4,177 (4,177/4,200)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 11.5, extr 6, pero 3,
extr_plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000425770
(
AK292973
)
(Platelet-activating factor acetylhydrolase IB subunit beta; EC=3.1.1.47; PAF acetylhydrolase 30 kDa subunit; PAF-AH 30 kDa subunit; PAF-AH subunit beta; PAFAH subunit beta;)
genome : 117,015,008 - 117,038,756 (23,749)
query : 1 - 1,165 (1,165/1,165)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 11.5, extr 6, pero 3,
extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000116855 (
ENST00000304808
)
(Platelet-activating factor acetylhydrolase IB subunit beta isoform a.)
genome : 117,015,009 - 117,038,708 (23,700)
query : 1 - 821 (821/821)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14.5, extr 8, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000426232
(
AK307366
)
(Platelet-activating factor acetylhydrolase IB subunit beta isoform a.)
genome : 117,015,009 - 117,038,708 (23,700)
query : 1 - 821 (821/821)
3 exons
identity = 0.999
5'(1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14.5, extr 8, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000629039 (
ENST00000529887
)
(Platelet-activating factor acetylhydrolase IB subunit beta isoform c.)
genome : 117,015,014 - 117,047,138 (32,125)
query : 1 - 1,056 (1,056/1,056)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, extr 12, cyto_nucl 9, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000095892
(
BC039721
)
(Platelet-activating factor acetylhydrolase IB subunit beta isoform c.)
genome : 117,015,025 - 117,047,591 (32,567)
query : 11 - 1,090 (1,080/1,122)
2 exons
identity = 0.998
5'(1.000;0.998)3'
coverage = 0.991
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000626096 (
ENST00000526888
)
(Platelet-activating factor acetylhydrolase IB subunit beta isoform c.)
genome : 117,015,025 - 117,047,591 (32,567)
query : 1 - 1,080 (1,080/1,099)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000029587
(
BC000398
)
(Platelet-activating factor acetylhydrolase IB subunit beta; EC=3.1.1.47; PAF acetylhydrolase 30 kDa subunit; PAF-AH 30 kDa subunit; PAF-AH subunit beta; PAFAH subunit beta;)
genome : 117,015,025 - 117,038,748 (23,724)
query : 1 - 1,140 (1,140/1,165)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 11.5, extr 6, pero 3,
extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000038621
(
BC019301
)
(Platelet-activating factor acetylhydrolase IB subunit beta; EC=3.1.1.47; PAF acetylhydrolase 30 kDa subunit; PAF-AH 30 kDa subunit; PAF-AH subunit beta; PAFAH subunit beta;)
genome : 117,015,025 - 117,038,748 (23,724)
query : 1 - 1,140 (1,140/1,165)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 11.5, extr 6, pero 3,
extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000101677
(
D63390
)
(Platelet-activating factor acetylhydrolase IB subunit beta; EC=3.1.1.47; PAF acetylhydrolase 30 kDa subunit; PAF-AH 30 kDa subunit; PAF-AH subunit beta; PAFAH subunit beta;)
genome : 117,015,040 - 117,038,814 (23,775)
query : 1 - 1,191 (1,191/1,195)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.997
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 11.5, extr 6, pero 3,
extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000086085
(
BC001774
)
(Conserved hypothetical protein.)
genome : 117,015,044 - 117,041,760 (26,717)
query : 1 - 1,290 (1,290/1,346)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13, extr 10, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000468598
(
DQ836739
)
(Platelet-activating factor acetylhydrolase IB subunit beta isoform c.)
genome : 117,015,060 - 117,048,888 (33,829)
query : 1 - 831 (831/850)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, extr 12, cyto_nucl 9, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000468599
(
DQ836740
)
(Platelet-activating factor acetylhydrolase IB subunit beta isoform c.)
genome : 117,015,060 - 117,048,888 (33,829)
query : 1 - 956 (956/974)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.992;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 10.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000468597
(
DQ836738
)
(Platelet-activating factor acetylhydrolase IB subunit beta isoform d.)
genome : 117,015,060 - 117,047,591 (32,532)
query : 1 - 2,455 (2,455/2,476)
6 exons
identity = 0.998
5'(1.000;0.989;1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 12, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000468600
(
DQ836741
)
(Platelet-activating factor acetylhydrolase IB subunit beta isoform c.)
genome : 117,015,060 - 117,047,128 (32,069)
query : 1 - 1,125 (1,125/1,153)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.992;1.000)3'
coverage = 1.000
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 10.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000468601
(
DQ836742
)
(Platelet-activating factor acetylhydrolase IB subunit beta isoform c.)
genome : 117,015,060 - 117,047,125 (32,066)
query : 1 - 997 (997/1,024)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, extr 12, cyto_nucl 9, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000629424 (
ENST00000530272
)
(Platelet-activating factor acetylhydrolase IB subunit beta isoform b.)
genome : 117,015,060 - 117,046,853 (31,794)
query : 1 - 850 (850/850)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 10.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000468602
(
DQ836743
)
Representative transcript
(Platelet-activating factor acetylhydrolase IB subunit beta; EC=3.1.1.47; PAF acetylhydrolase 30 kDa subunit; PAF-AH 30 kDa subunit; PAF-AH subunit beta; PAFAH subunit beta;)
genome : 117,015,060 - 117,041,760 (26,701)
query : 1 - 4,118 (4,118/4,141)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 11.5, extr 6, pero 3,
extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB173767
Gallus
sp. (Chicken) : AJ719312
Mus
sp. (Mouse) : AK153424
Rattus
sp. (Rat) : BC081714
Danio
sp. (Zebrafish) : BC160649
Pongo
sp. (Orangutan) : CR861287
Bos
sp. (Cow) : D49678
Equus
sp. (Horse) : ENSECAT00000019425
Monodelphis
sp. (Opossum) : ENSMODT00000017529
Oryzias
sp. (Medaka) : ENSORLT00000011279
Pan
sp. (Chimpanzee) : ENSPTRT00000008026
Takifugu
sp. (Fugu) : SINFRUT00000160360
Canis
sp. (Dog) : XM_536562
HIX0010160
HIT000632292 (
ENST00000533206
)
(Platelet-activating factor acetylhydrolase IB subunit beta isoform d.)
genome : 117,015,098 - 117,034,838 (19,741)
query : 1 - 685 (685/685)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11, extr 9, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000267586
(
CR456736
)
(Platelet-activating factor acetylhydrolase IB subunit beta; EC=3.1.1.47; PAF acetylhydrolase 30 kDa subunit; PAF-AH 30 kDa subunit; PAF-AH subunit beta; PAFAH subunit beta;)
genome : 117,023,164 - 117,038,411 (15,248)
query : 1 - 686 (686/690)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.994
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 11.5, extr 6, pero 3,
extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000632753 (
ENST00000533677
)
(Platelet-activating factor acetylhydrolase IB subunit beta isoform d.)
genome : 117,030,103 - 117,031,979 (1,877)
query : 1 - 756 (756/756)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14, mito 6, nucl 5.5, pero 3,
E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000090417
(
BC021287
)
(Conserved hypothetical protein.)
genome : 117,039,254 - 117,041,343 (2,090)
query : 1 - 2,091 (2,091/2,112)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 9, nucl 8.5, mito 6.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0010160
HIT000087424
(
BC010009
)
(Conserved hypothetical protein.)
genome : 117,039,326 - 117,041,343 (2,018)
query : 3 - 2,020 (2,018/2,039)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 9, nucl 8.5, mito 6.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
HIX0201696
HIT000123775 (
ENST00000324225
)
(SID1 transmembrane family member 2; Precursor;)
genome : 117,049,449 - 117,068,158 (18,710)
query : 1 - 4,406 (4,406/4,406)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000632047 (
ENST00000532960
)
(SID1 transmembrane family member 2 precursor.)
genome : 117,049,452 - 117,052,547 (3,096)
query : 1 - 540 (540/540)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000425298
(
AK292501
)
(SID1 transmembrane family member 2; Precursor;)
genome : 117,049,459 - 117,067,250 (17,792)
query : 1 - 3,488 (3,488/3,488)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR025958 : SID1 transmembrane family
GO :
0016021 : Cellular Component : integral component of membrane
0033227 : Biological Process : dsRNA transport
0051033 : Molecular Function : RNA transmembrane transporter activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000071612
(
AF151799
)
(SID1 transmembrane family member 2 precursor.)
genome : 117,049,897 - 117,068,160 (18,264)
query : 1 - 3,142 (3,142/3,146)
27 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.954;0.986)3'
coverage = 0.999
InterPro :
IPR025958 : SID1 transmembrane family
GO :
0016021 : Cellular Component : integral component of membrane
0033227 : Biological Process : dsRNA transport
0051033 : Molecular Function : RNA transmembrane transporter activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000111796 (
ENST00000278951
)
(SID1 transmembrane family member 2 precursor.)
genome : 117,049,897 - 117,068,160 (18,264)
query : 1 - 3,135 (3,135/3,135)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000624579 (
ENST00000525339
)
(SID1 transmembrane family member 2 precursor.)
genome : 117,049,897 - 117,062,408 (12,512)
query : 1 - 382 (382/382)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000340727
(
BC114522
)
(SID1 transmembrane family member 2; Precursor;)
genome : 117,049,910 - 117,068,011 (18,102)
query : 1 - 3,789 (3,789/3,789)
26 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;0.990;1.000;1.000;
1.000;1.000;1.000;0.902;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR025958 : SID1 transmembrane family
GO :
0016021 : Cellular Component : integral component of membrane
0033227 : Biological Process : dsRNA transport
0051033 : Molecular Function : RNA transmembrane transporter activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000340778
(
BC114959
)
(SID1 transmembrane family member 2 precursor.)
genome : 117,049,910 - 117,068,011 (18,102)
query : 1 - 1,860 (1,860/1,860)
6 exons
identity = 0.998
5'(1.000;0.940;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR025958 : SID1 transmembrane family
GO :
0016021 : Cellular Component : integral component of membrane
0033227 : Biological Process : dsRNA transport
0051033 : Molecular Function : RNA transmembrane transporter activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000529015 (
ENST00000431081
)
(SID1 transmembrane family member 2; Precursor;)
genome : 117,049,910 - 117,068,011 (18,102)
query : 1 - 3,789 (3,789/3,789)
26 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.902;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000252486
(
AY358442
)
Representative transcript
(SID1 transmembrane family member 2; Precursor;)
genome : 117,049,939 - 117,068,158 (18,220)
query : 10 - 3,925 (3,916/3,940)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR025958 : SID1 transmembrane family
GO :
0016021 : Cellular Component : integral component of membrane
0033227 : Biological Process : dsRNA transport
0051033 : Molecular Function : RNA transmembrane transporter activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC051101
Bos
sp. (Cow) : BT021773
Oryzias
sp. (Medaka) : ENSORLT00000019777
Pongo
sp. (Orangutan) : ENSPPYT00000004653
Tetraodon
sp. (Tetraodon) : GSTENT00012607001
Takifugu
sp. (Fugu) : SINFRUT00000163757
Rattus
sp. (Rat) : XM_001068825
Macaca
sp. (Macaque) : XM_001091606
Pan
sp. (Chimpanzee) : XM_001156008
Danio
sp. (Zebrafish) : XM_001337194
Monodelphis
sp. (Opossum) : XM_001380823
Equus
sp. (Horse) : XM_001502574
Canis
sp. (Dog) : XM_546509
HIX0201696
HIT000366768 (
NM_001040455
)
(SID1 transmembrane family member 2; Precursor;)
genome : 117,049,939 - 117,068,161 (18,223)
query : 1 - 3,919 (3,919/3,919)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000425771
(
AK292974
)
(SID1 transmembrane family member 2; Precursor;)
genome : 117,049,948 - 117,066,933 (16,986)
query : 1 - 2,682 (2,682/2,682)
26 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.986;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.987;
0.979;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR025958 : SID1 transmembrane family
GO :
0016021 : Cellular Component : integral component of membrane
0033227 : Biological Process : dsRNA transport
0051033 : Molecular Function : RNA transmembrane transporter activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000722473
(
KC109742
)
(SID1 transmembrane family member 2 precursor.)
genome : 117,049,983 - 117,066,779 (16,797)
query : 1 - 2,493 (2,493/2,493)
26 exons
identity = 0.996
5'(0.983;1.000;0.994;0.978;1.000;1.000;1.000;
0.985;1.000;1.000;1.000;1.000;1.000;0.973;
1.000;1.000;1.000;1.000;1.000;1.000;0.987;
1.000;0.991;1.000;0.991;1.000)3'
coverage = 1.000
InterPro :
IPR025958 : SID1 transmembrane family
GO :
0016021 : Cellular Component : integral component of membrane
0033227 : Biological Process : dsRNA transport
0051033 : Molecular Function : RNA transmembrane transporter activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000497647
(
AK303023
)
(SID1 transmembrane family member 2 precursor.)
genome : 117,049,983 - 117,066,717 (16,735)
query : 1 - 2,519 (2,519/2,519)
25 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.985;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR025958 : SID1 transmembrane family
GO :
0016021 : Cellular Component : integral component of membrane
0033227 : Biological Process : dsRNA transport
0051033 : Molecular Function : RNA transmembrane transporter activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000624091 (
ENST00000524842
)
(SID1 transmembrane family member 2 precursor.)
genome : 117,050,085 - 117,056,940 (6,856)
query : 1 - 835 (835/835)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 20, cyto 4, mito 4, cyto_mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000630483 (
ENST00000531353
)
(SID1 transmembrane family member 2 precursor.)
genome : 117,050,404 - 117,053,314 (2,911)
query : 1 - 583 (583/583)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 6, cyto 5, mito 5, cyto_mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000627577 (
ENST00000528397
)
(SID1 transmembrane family member 2 precursor.)
genome : 117,052,160 - 117,053,256 (1,097)
query : 1 - 596 (596/596)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000630085 (
ENST00000530948
)
(SID1 transmembrane family member 2 precursor.)
genome : 117,052,180 - 117,054,855 (2,676)
query : 1 - 568 (568/568)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 13, cyto_nucl 9.83333, cyto_pero 8,
nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000630387 (
ENST00000531255
)
(SID1 transmembrane family member 2 precursor.)
genome : 117,052,814 - 117,054,594 (1,781)
query : 1 - 707 (707/724)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.977
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 9, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000496125
(
AK301501
)
(SID1 transmembrane family member 2 precursor.)
genome : 117,056,667 - 117,063,329 (6,663)
query : 1 - 1,258 (1,258/1,258)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR025958 : SID1 transmembrane family
GO :
0016021 : Cellular Component : integral component of membrane
0033227 : Biological Process : dsRNA transport
0051033 : Molecular Function : RNA transmembrane transporter activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, plas 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000628598 (
ENST00000529441
)
(SID1 transmembrane family member 2 precursor.)
genome : 117,056,667 - 117,063,329 (6,663)
query : 1 - 1,258 (1,258/1,258)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, plas 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000057084
(
BX648437
)
(SID1 transmembrane family member 2 precursor.)
genome : 117,056,846 - 117,068,161 (11,316)
query : 8 - 3,017 (3,010/3,097)
18 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.985;
1.000;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.999)3'
coverage = 0.997
InterPro :
IPR025958 : SID1 transmembrane family
GO :
0016021 : Cellular Component : integral component of membrane
0033227 : Biological Process : dsRNA transport
0051033 : Molecular Function : RNA transmembrane transporter activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000082172
(
AK075137
)
(SID1 transmembrane family member 2 precursor.)
genome : 117,057,319 - 117,068,143 (10,825)
query : 1 - 2,879 (2,879/2,879)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.986;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR025958 : SID1 transmembrane family
GO :
0016021 : Cellular Component : integral component of membrane
0033227 : Biological Process : dsRNA transport
0051033 : Molecular Function : RNA transmembrane transporter activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000626021 (
ENST00000526813
)
(SID1 transmembrane family member 2; Precursor;)
genome : 117,058,343 - 117,062,645 (4,303)
query : 1 - 2,259 (2,259/2,259)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000626849 (
ENST00000527654
)
(SID1 transmembrane family member 2 precursor.)
genome : 117,059,707 - 117,060,155 (449)
query : 1 - 357 (357/357)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9.5, cyto_mito 8.83333, plas 7, mito 7,
E.R._mito 5.33333, cyto_pero 5.33333, cyto_golg 5.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000624234 (
ENST00000524988
)
(SID1 transmembrane family member 2 precursor.)
genome : 117,059,741 - 117,060,998 (1,258)
query : 1 - 476 (476/476)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000628641 (
ENST00000529484
)
(SID1 transmembrane family member 2 precursor.)
genome : 117,061,399 - 117,064,867 (3,469)
query : 1 - 833 (833/833)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000624311 (
ENST00000525065
)
(SID1 transmembrane family member 2 precursor.)
genome : 117,061,444 - 117,063,721 (2,278)
query : 1 - 1,828 (1,828/1,828)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000459000
(
DQ592469
)
(Non-protein coding transcript.)
genome : 117,062,429 - 117,062,459 (31)
query : 1 - 31 (31/31)
1 exon
identity = 0.968
5'(0.968)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000082505
(
AK075471
)
(SID1 transmembrane family member 2 precursor.)
genome : 117,062,626 - 117,068,161 (5,536)
query : 1 - 2,111 (2,111/2,111)
8 exons
identity = 0.998
5'(0.990;1.000;1.000;1.000;1.000;1.000;0.991;
0.999)3'
coverage = 1.000
InterPro :
IPR025958 : SID1 transmembrane family
GO :
0016021 : Cellular Component : integral component of membrane
0033227 : Biological Process : dsRNA transport
0051033 : Molecular Function : RNA transmembrane transporter activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000624712 (
ENST00000525478
)
(SID1 transmembrane family member 2 precursor.)
genome : 117,063,295 - 117,067,220 (3,926)
query : 1 - 840 (840/840)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0201696
HIT000631174 (
ENST00000532062
)
(SID1 transmembrane family member 2 precursor.)
genome : 117,063,333 - 117,067,995 (4,663)
query : 1 - 2,143 (2,143/2,143)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201696)
HIX0010161
HIT000009493
(
AK026219
)
Representative transcript
(Conserved hypothetical protein.)
genome : 117,066,329 - 117,072,630 (6,302)
query : 1 - 1,244 (1,244/1,261)
8 exons
identity = 0.997
3'(0.998;1.000;1.000;0.984;0.992;1.000;1.000;
1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, extr 6, cyto 3, cyto_nucl 3, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010161)
HIX0010161
HIT000726294 (
NR_045215
)
(Conserved hypothetical protein.)
genome : 117,066,329 - 117,072,630 (6,302)
query : 1 - 1,244 (1,244/1,261)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, extr 6, cyto 3, cyto_nucl 3, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010161)
HIX0010162
HIT000476420 (
ENST00000392951
)
(Transgelin; 22 kDa actin-binding protein; Protein WS3-10; Smooth muscle protein 22-alpha; SM22-alpha;)
genome : 117,070,037 - 117,075,273 (5,237)
query : 1 - 928 (928/928)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, extr 6, mito 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010162
HIT000200044 (
NM_003186
)
(Transgelin; 22 kDa actin-binding protein; Protein WS3-10; Smooth muscle protein 22-alpha; SM22-alpha;)
genome : 117,070,040 - 117,075,508 (5,469)
query : 1 - 1,160 (1,160/1,177)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, extr 6, mito 3, extr_plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010162
HIT000315405 (
NM_001001522
)
(Transgelin; 22 kDa actin-binding protein; Protein WS3-10; Smooth muscle protein 22-alpha; SM22-alpha;)
genome : 117,070,040 - 117,075,508 (5,469)
query : 1 - 1,557 (1,557/1,574)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, extr 6, mito 3, extr_plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010162
HIT000196914
(
M95787
)
(Transgelin; 22 kDa actin-binding protein; Protein WS3-10; Smooth muscle protein 22-alpha; SM22-alpha;)
genome : 117,070,086 - 117,075,476 (5,391)
query : 1 - 1,083 (1,083/1,083)
5 exons
identity = 0.994
5'(1.000;0.990;0.994;1.000;0.993)3'
coverage = 1.000
InterPro :
IPR000557 : Calponin repeat
IPR001715 : Calponin homology domain
IPR003096 : Smooth muscle protein/calponin
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 11.5, extr 7, nucl 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010162
HIT000035136
(
BC010946
)
(Hypothetical short protein.)
genome : 117,070,091 - 117,075,477 (5,387)
query : 5 - 469 (465/549)
3 exons
identity = 0.998
5'(1.000;1.000;0.997)3'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 8, cyto_nucl 3.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010162
HIT000432909
(
AK314043
)
(Transgelin; 22 kDa actin-binding protein; Protein WS3-10; Smooth muscle protein 22-alpha; SM22-alpha;)
genome : 117,070,091 - 117,075,075 (4,985)
query : 1 - 676 (676/676)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000557 : Calponin repeat
IPR001715 : Calponin homology domain
IPR003096 : Smooth muscle protein/calponin
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, extr 6, mito 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010162
HIT000334541
(
BC093050
)
Representative transcript
(Transgelin; 22 kDa actin-binding protein; Protein WS3-10; Smooth muscle protein 22-alpha; SM22-alpha;)
genome : 117,070,097 - 117,075,523 (5,427)
query : 1 - 1,121 (1,121/1,241)
5 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;0.995)3'
coverage = 1.000
InterPro :
IPR000557 : Calponin repeat
IPR001715 : Calponin homology domain
IPR003096 : Smooth muscle protein/calponin
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, extr 6, mito 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB220378
Equus
sp. (Horse) : AB364290
Mus
sp. (Mouse) : AK077235
Danio
sp. (Zebrafish) : AY398421
Bos
sp. (Cow) : BC105336
Tetraodon
sp. (Tetraodon) : CR724579
Gallus
sp. (Chicken) : ENSGALT00000019425
Monodelphis
sp. (Opossum) : ENSMODT00000017501
Oryzias
sp. (Medaka) : ENSORLT00000011293
Pongo
sp. (Orangutan) : ENSPPYT00000004655
Rattus
sp. (Rat) : M83107
Takifugu
sp. (Fugu) : SINFRUT00000163740
Pan
sp. (Chimpanzee) : XM_001156008
Canis
sp. (Dog) : XM_856022
HIX0010162
HIT000624764 (
ENST00000525531
)
(Transgelin; 22 kDa actin-binding protein; Protein WS3-10; Smooth muscle protein 22-alpha; SM22-alpha;)
genome : 117,070,098 - 117,075,257 (5,160)
query : 1 - 1,048 (1,048/1,048)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, extr 6, mito 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010162
HIT000032090
(
BC004927
)
(Transgelin; 22 kDa actin-binding protein; Protein WS3-10; Smooth muscle protein 22-alpha; SM22-alpha;)
genome : 117,070,110 - 117,075,477 (5,368)
query : 1 - 1,456 (1,456/1,479)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000557 : Calponin repeat
IPR001715 : Calponin homology domain
IPR003096 : Smooth muscle protein/calponin
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, extr 6, mito 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010162
HIT000111800 (
ENST00000278968
)
(Transgelin; 22 kDa actin-binding protein; Protein WS3-10; Smooth muscle protein 22-alpha; SM22-alpha;)
genome : 117,070,110 - 117,075,477 (5,368)
query : 1 - 1,456 (1,456/1,477)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, extr 6, mito 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010162
HIT000101069
(
D17409
)
(Transgelin; 22 kDa actin-binding protein; Protein WS3-10; Smooth muscle protein 22-alpha; SM22-alpha;)
genome : 117,070,114 - 117,075,476 (5,363)
query : 1 - 1,054 (1,054/1,056)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR000557 : Calponin repeat
IPR001715 : Calponin homology domain
IPR003096 : Smooth muscle protein/calponin
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, extr 6, mito 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010162
HIT000306613
(
CR749612
)
(Transgelin; 22 kDa actin-binding protein; Protein WS3-10; Smooth muscle protein 22-alpha; SM22-alpha;)
genome : 117,070,743 - 117,075,477 (4,735)
query : 1 - 3,754 (3,754/3,903)
5 exons
identity = 0.998
5'(0.997;0.999;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000557 : Calponin repeat
IPR001715 : Calponin homology domain
IPR003096 : Smooth muscle protein/calponin
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, extr 6, mito 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010162
HIT000628945 (
ENST00000529792
)
(Transgelin; 22 kDa actin-binding protein; Protein WS3-10; Smooth muscle protein 22-alpha; SM22-alpha;)
genome : 117,070,971 - 117,074,117 (3,147)
query : 1 - 375 (375/375)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 12, extr 7, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010162
HIT000329490
(
AB209555
)
(Transgelin-2 isoform a.)
genome : 117,071,882 - 117,075,476 (3,595)
query : 1 - 3,298 (3,298/3,298)
2 exons
identity = 0.999
5'(0.999;1.000)3'
coverage = 1.000
InterPro :
IPR001715 : Calponin homology domain
IPR003096 : Smooth muscle protein/calponin
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14.5, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010162
HIT000632936 (
ENST00000533863
)
(Transgelin-2 isoform a.)
genome : 117,071,882 - 117,075,476 (3,595)
query : 1 - 3,298 (3,298/3,298)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010162
HIT000262069
(
BC065829
)
(Transgelin; 22 kDa actin-binding protein; Protein WS3-10; Smooth muscle protein 22-alpha; SM22-alpha;)
genome : 117,072,465 - 117,075,503 (3,039)
query : 1 - 1,241 (1,241/1,278)
5 exons
identity = 0.998
5'(0.995;1.000;1.000;1.000;0.997)3'
coverage = 0.999
InterPro :
IPR000557 : Calponin repeat
IPR001715 : Calponin homology domain
IPR003096 : Smooth muscle protein/calponin
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, extr 6, mito 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010162
HIT000629793 (
ENST00000530649
)
(Transgelin; 22 kDa actin-binding protein; Protein WS3-10; Smooth muscle protein 22-alpha; SM22-alpha;)
genome : 117,072,466 - 117,075,477 (3,012)
query : 1 - 1,212 (1,212/1,227)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, extr 6, mito 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010162
HIT000090929
(
BC024296
)
(Transgelin; 22 kDa actin-binding protein; Protein WS3-10; Smooth muscle protein 22-alpha; SM22-alpha;)
genome : 117,072,589 - 117,075,477 (2,889)
query : 1 - 2,149 (2,149/2,166)
4 exons
identity = 1.000
5'(0.999;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000557 : Calponin repeat
IPR001715 : Calponin homology domain
IPR003096 : Smooth muscle protein/calponin
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, extr 6, mito 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010162
HIT000096802
(
BC041624
)
(Transgelin; 22 kDa actin-binding protein; Protein WS3-10; Smooth muscle protein 22-alpha; SM22-alpha;)
genome : 117,072,589 - 117,075,477 (2,889)
query : 1 - 2,149 (2,149/2,166)
4 exons
identity = 1.000
5'(0.999;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000557 : Calponin repeat
IPR001715 : Calponin homology domain
IPR003096 : Smooth muscle protein/calponin
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, extr 6, mito 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010162
HIT000631960 (
ENST00000532870
)
(Transgelin; 22 kDa actin-binding protein; Protein WS3-10; Smooth muscle protein 22-alpha; SM22-alpha;)
genome : 117,072,589 - 117,075,477 (2,889)
query : 1 - 2,149 (2,149/2,166)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, extr 6, mito 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010162
HIT000334393
(
BC092415
)
(Transgelin; 22 kDa actin-binding protein; Protein WS3-10; Smooth muscle protein 22-alpha; SM22-alpha;)
genome : 117,073,606 - 117,075,508 (1,903)
query : 1 - 1,164 (1,164/1,198)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000557 : Calponin repeat
IPR001715 : Calponin homology domain
IPR003096 : Smooth muscle protein/calponin
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, extr 6, mito 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010162
HIT000266590
(
BT019648
)
(Transgelin; 22 kDa actin-binding protein; Protein WS3-10; Smooth muscle protein 22-alpha; SM22-alpha;)
genome : 117,073,730 - 117,075,075 (1,346)
query : 1 - 606 (606/606)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000557 : Calponin repeat
IPR001715 : Calponin homology domain
IPR003096 : Smooth muscle protein/calponin
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, extr 6, mito 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010162
HIT000266591
(
BT019649
)
(Transgelin; 22 kDa actin-binding protein; Protein WS3-10; Smooth muscle protein 22-alpha; SM22-alpha;)
genome : 117,073,730 - 117,075,075 (1,346)
query : 1 - 606 (606/606)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000557 : Calponin repeat
IPR001715 : Calponin homology domain
IPR003096 : Smooth muscle protein/calponin
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, extr 6, mito 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010162
HIT000268422
(
CR536484
)
(Transgelin; 22 kDa actin-binding protein; Protein WS3-10; Smooth muscle protein 22-alpha; SM22-alpha;)
genome : 117,073,730 - 117,075,075 (1,346)
query : 1 - 606 (606/606)
4 exons
identity = 0.997
5'(0.994;0.994;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000557 : Calponin repeat
IPR001715 : Calponin homology domain
IPR003096 : Smooth muscle protein/calponin
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 11.5, extr 7, nucl 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010162
HIT000196511
(
M83106
)
(Transgelin; 22 kDa actin-binding protein; Protein WS3-10; Smooth muscle protein 22-alpha; SM22-alpha;)
genome : 117,073,730 - 117,075,072 (1,343)
query : 1 - 603 (603/603)
4 exons
identity = 0.995
5'(1.000;0.989;1.000;0.993)3'
coverage = 1.000
InterPro :
IPR000557 : Calponin repeat
IPR001715 : Calponin homology domain
IPR003096 : Smooth muscle protein/calponin
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 10.5, extr 7, mito 3, nucl 2,
pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010162
HIT000268554
(
CR541681
)
(Transgelin; 22 kDa actin-binding protein; Protein WS3-10; Smooth muscle protein 22-alpha; SM22-alpha;)
genome : 117,073,730 - 117,075,072 (1,343)
query : 1 - 603 (603/603)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000557 : Calponin repeat
IPR001715 : Calponin homology domain
IPR003096 : Smooth muscle protein/calponin
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, extr 6, mito 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010162
HIT000628777 (
ENST00000529622
)
(Transgelin; 22 kDa actin-binding protein; Protein WS3-10; Smooth muscle protein 22-alpha; SM22-alpha;)
genome : 117,073,860 - 117,075,121 (1,262)
query : 1 - 501 (501/501)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010162)
HIX0010163
HIT000122610 (
ENST00000320934
)
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Lymphoma proprotein convertase; Prohormone convertase 7; Proprotein convertase 7; PC7; Proprotein convertase 8; PC8; hPC8; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,075,053 - 117,103,241 (28,189)
query : 1 - 4,649 (4,649/4,649)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.21.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
HIX0026164
HIT000055272
(
BX640723
)
Representative transcript
(Conserved hypothetical protein.)
genome : 117,075,683 - 117,078,178 (2,496)
query : 1 - 2,496 (2,496/2,516)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 7.5, extr 7, cyto_nucl 6, E.R._mito 6,
mito_pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026164)
HIX0010163
HIT000219733
(
U40623
)
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Lymphoma proprotein convertase; Prohormone convertase 7; Proprotein convertase 7; PC7; Proprotein convertase 8; PC8; hPC8; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,075,789 - 117,100,575 (24,787)
query : 7 - 3,303 (3,297/3,324)
15 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
EC number :
EC 3.4.21.-
InterPro :
IPR000209 : Peptidase S8/S53 domain
IPR002884 : Proprotein convertase, P
IPR008979 : Galactose-binding domain-like
IPR009020 : Proteinase inhibitor, propeptide
IPR015500 : Peptidase S8, subtilisin-related
IPR022398 : Peptidase S8, subtilisin, His-active site
IPR023828 : Peptidase S8, subtilisin, Ser-active site
GO :
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
HIX0010163
HIT000050468
(
BC006357
)
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Lymphoma proprotein convertase; Prohormone convertase 7; Proprotein convertase 7; PC7; Proprotein convertase 8; PC8; hPC8; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,075,789 - 117,101,185 (25,397)
query : 17 - 3,285 (3,269/3,304)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.995
EC number :
EC 3.4.21.-
InterPro :
IPR000209 : Peptidase S8/S53 domain
IPR002884 : Proprotein convertase, P
IPR008979 : Galactose-binding domain-like
IPR009020 : Proteinase inhibitor, propeptide
IPR015500 : Peptidase S8, subtilisin-related
IPR022398 : Peptidase S8, subtilisin, His-active site
IPR023828 : Peptidase S8, subtilisin, Ser-active site
GO :
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, lyso 4, E.R. 3.5, E.R._mito 3, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
HIX0010163
HIT000035049
(
BC010696
)
Representative transcript
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Lymphoma proprotein convertase; Prohormone convertase 7; Proprotein convertase 7; PC7; Proprotein convertase 8; PC8; hPC8; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,075,789 - 117,102,811 (27,023)
query : 1 - 3,483 (3,483/3,497)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.21.-
InterPro :
IPR000209 : Peptidase S8/S53 domain
IPR002884 : Proprotein convertase, P
IPR008979 : Galactose-binding domain-like
IPR009020 : Proteinase inhibitor, propeptide
IPR015500 : Peptidase S8, subtilisin-related
IPR022398 : Peptidase S8, subtilisin, His-active site
IPR023828 : Peptidase S8, subtilisin, Ser-active site
GO :
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720169
Mus
sp. (Mouse) : BC056456
Macaca
sp. (Macaque) : ENSMMUT00000002921
Oryzias
sp. (Medaka) : ENSORLT00000019690
Pongo
sp. (Orangutan) : ENSPPYT00000004656
Tetraodon
sp. (Tetraodon) : GSTENT00026811001
Rattus
sp. (Rat) : U36580
Monodelphis
sp. (Opossum) : XM_001380817
Equus
sp. (Horse) : XM_001502605
Pan
sp. (Chimpanzee) : XM_508776
Danio
sp. (Zebrafish) : XM_690656
Canis
sp. (Dog) : XM_845131
Bos
sp. (Cow) : XM_864784
HIX0010163
HIT000201453 (
NM_004716
)
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Lymphoma proprotein convertase; Prohormone convertase 7; Proprotein convertase 7; PC7; Proprotein convertase 8; PC8; hPC8; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,075,789 - 117,102,811 (27,023)
query : 1 - 3,483 (3,483/3,497)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.21.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
HIX0010163
HIT000633585 (
ENST00000534529
)
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Lymphoma proprotein convertase; Prohormone convertase 7; Proprotein convertase 7; PC7; Proprotein convertase 8; PC8; hPC8; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,075,790 - 117,097,592 (21,803)
query : 1 - 5,393 (5,393/5,393)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.21.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
HIX0010163
HIT000022062
(
AK097207
)
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Lymphoma proprotein convertase; Prohormone convertase 7; Proprotein convertase 7; PC7; Proprotein convertase 8; PC8; hPC8; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,075,790 - 117,094,884 (19,095)
query : 1 - 3,169 (3,169/3,169)
10 exons
identity = 0.998
3'(0.996;1.000;1.000;0.988;0.989;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.21.-
InterPro :
IPR000209 : Peptidase S8/S53 domain
IPR002884 : Proprotein convertase, P
IPR008979 : Galactose-binding domain-like
IPR015500 : Peptidase S8, subtilisin-related
IPR023828 : Peptidase S8, subtilisin, Ser-active site
GO :
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 13.5, nucl 12.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
HIX0010163
HIT000639073 (
ENST00000540028
)
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Lymphoma proprotein convertase; Prohormone convertase 7; Proprotein convertase 7; PC7; Proprotein convertase 8; PC8; hPC8; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,075,790 - 117,094,884 (19,095)
query : 1 - 3,169 (3,169/3,169)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.21.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 13.5, nucl 12.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
HIX0010163
HIT000047135
(
AK127262
)
(Conserved hypothetical protein.)
genome : 117,075,790 - 117,080,816 (5,027)
query : 1 - 5,027 (5,027/5,027)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 10, extr_plas 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
HIX0010163
HIT000219363
(
U33849
)
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Lymphoma proprotein convertase; Prohormone convertase 7; Proprotein convertase 7; PC7; Proprotein convertase 8; PC8; hPC8; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,075,812 - 117,101,185 (25,374)
query : 19 - 3,409 (3,391/3,409)
16 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.995
EC number :
EC 3.4.21.-
InterPro :
IPR000209 : Peptidase S8/S53 domain
IPR002884 : Proprotein convertase, P
IPR008979 : Galactose-binding domain-like
IPR009020 : Proteinase inhibitor, propeptide
IPR015500 : Peptidase S8, subtilisin-related
IPR022398 : Peptidase S8, subtilisin, His-active site
IPR023828 : Peptidase S8, subtilisin, Ser-active site
GO :
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
HIX0010163
HIT000330687
(
AK222907
)
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Lymphoma proprotein convertase; Prohormone convertase 7; Proprotein convertase 7; PC7; Proprotein convertase 8; PC8; hPC8; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,076,567 - 117,102,781 (26,215)
query : 1 - 2,675 (2,675/2,675)
17 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;1.000)5'
coverage = 1.000
EC number :
EC 3.4.21.-
InterPro :
IPR000209 : Peptidase S8/S53 domain
IPR002884 : Proprotein convertase, P
IPR008979 : Galactose-binding domain-like
IPR009020 : Proteinase inhibitor, propeptide
IPR015500 : Peptidase S8, subtilisin-related
IPR023828 : Peptidase S8, subtilisin, Ser-active site
GO :
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
HIX0010163
HIT000628615 (
ENST00000529458
)
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Lymphoma proprotein convertase; Prohormone convertase 7; Proprotein convertase 7; PC7; Proprotein convertase 8; PC8; hPC8; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,076,663 - 117,078,852 (2,190)
query : 1 - 695 (695/695)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.21.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 8, plas 7, pero 6, cyto 4.5, cyto_mito 4, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
HIX0010163
HIT000431295
(
AK312429
)
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Lymphoma proprotein convertase; Prohormone convertase 7; Proprotein convertase 7; PC7; Proprotein convertase 8; PC8; hPC8; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,076,713 - 117,102,816 (26,104)
query : 1 - 2,564 (2,564/2,564)
17 exons
identity = 0.999
3'(0.997;1.000;1.000;0.989;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.989;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.21.-
InterPro :
IPR000209 : Peptidase S8/S53 domain
IPR002884 : Proprotein convertase, P
IPR008979 : Galactose-binding domain-like
IPR009020 : Proteinase inhibitor, propeptide
IPR015500 : Peptidase S8, subtilisin-related
IPR022398 : Peptidase S8, subtilisin, His-active site
IPR023828 : Peptidase S8, subtilisin, Ser-active site
GO :
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
HIX0010163
HIT000099790
(
BT006870
)
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Lymphoma proprotein convertase; Prohormone convertase 7; Proprotein convertase 7; PC7; Proprotein convertase 8; PC8; hPC8; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,076,715 - 117,100,560 (23,846)
query : 1 - 2,356 (2,356/2,358)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 3.4.21.-
InterPro :
IPR000209 : Peptidase S8/S53 domain
IPR002884 : Proprotein convertase, P
IPR008979 : Galactose-binding domain-like
IPR009020 : Proteinase inhibitor, propeptide
IPR015500 : Peptidase S8, subtilisin-related
IPR022398 : Peptidase S8, subtilisin, His-active site
IPR023828 : Peptidase S8, subtilisin, Ser-active site
GO :
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
HIX0010163
HIT000626243 (
ENST00000527037
)
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Lymphoma proprotein convertase; Prohormone convertase 7; Proprotein convertase 7; PC7; Proprotein convertase 8; PC8; hPC8; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,076,864 - 117,090,854 (13,991)
query : 1 - 2,346 (2,346/2,346)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.21.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18.5, extr_plas 12, mito 5.5, extr 4.5,
cyto_mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
HIX0010163
HIT000627055 (
ENST00000527861
)
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Lymphoma proprotein convertase; Prohormone convertase 7; Proprotein convertase 7; PC7; Proprotein convertase 8; PC8; hPC8; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,077,396 - 117,079,397 (2,002)
query : 1 - 925 (925/925)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.21.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto 9.5, extr 8, cyto_pero 5.5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
HIX0010163
HIT000329950_04
(
AB231710
)
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Lymphoma proprotein convertase; Prohormone convertase 7; Proprotein convertase 7; PC7; Proprotein convertase 8; PC8; hPC8; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,077,430 - 117,078,753 (1,324)
query : 1 - 247 (247/247)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.21.-
InterPro :
IPR002884 : Proprotein convertase, P
IPR008979 : Galactose-binding domain-like
IPR015500 : Peptidase S8, subtilisin-related
GO :
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 10.6667, nucl 8.5, cyto 7.5,
cyto_pero 6.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
HIX0010163
HIT000329951_04
(
AB231711
)
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Lymphoma proprotein convertase; Prohormone convertase 7; Proprotein convertase 7; PC7; Proprotein convertase 8; PC8; hPC8; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,077,430 - 117,078,753 (1,324)
query : 1 - 152 (152/152)
2 exons
identity = 0.993
3'(1.000;0.985)5'
coverage = 1.000
EC number :
EC 3.4.21.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
HIX0010163
HIT000329952
(
AB231712
)
(Conserved hypothetical protein.)
genome : 117,077,433 - 117,078,753 (1,321)
query : 1 - 325 (325/325)
4 exons
identity = 0.991
3'(0.976;1.000;1.000;0.985)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 10, cyto_nucl 8, extr_plas 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
HIX0010163
HIT000631903 (
ENST00000532810
)
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Lymphoma proprotein convertase; Prohormone convertase 7; Proprotein convertase 7; PC7; Proprotein convertase 8; PC8; hPC8; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,077,490 - 117,080,081 (2,592)
query : 1 - 589 (589/589)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.21.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
HIX0010163
HIT000046293
(
AK126420
)
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Lymphoma proprotein convertase; Prohormone convertase 7; Proprotein convertase 7; PC7; Proprotein convertase 8; PC8; hPC8; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,077,988 - 117,081,008 (3,021)
query : 1 - 3,019 (3,019/3,019)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
EC number :
EC 3.4.21.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 14, nucl 8, extr 3, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000043687
HIX0010163
HIT000630697_02 (
ENST00000531573
)
(Hypothetical short protein.)
genome : 117,078,409 - 117,079,204 (796)
query : 1 - 562 (562/562)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, extr 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
HIX0010163
HIT000632221 (
ENST00000533135
)
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Prohormone convertase 7; Proprotein convertase 7; PC7; rPC7; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,078,491 - 117,089,881 (11,391)
query : 1 - 549 (549/549)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.21.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 10, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
HIX0010163
HIT000628139 (
ENST00000528973
)
(Conserved hypothetical protein.)
genome : 117,079,389 - 117,089,180 (9,792)
query : 1 - 9,347 (9,347/9,347)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, extr 10, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
HIX0010163
HIT000010430
(
AK027156
)
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Lymphoma proprotein convertase; Prohormone convertase 7; Proprotein convertase 7; PC7; Proprotein convertase 8; PC8; hPC8; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,087,173 - 117,089,661 (2,489)
query : 25 - 2,511 (2,487/2,538)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 0.989
EC number :
EC 3.4.21.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto 9, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
HIX0010163
HIT000627400 (
ENST00000528217
)
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Lymphoma proprotein convertase; Prohormone convertase 7; Proprotein convertase 7; PC7; Proprotein convertase 8; PC8; hPC8; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,089,840 - 117,093,779 (3,940)
query : 1 - 2,954 (2,954/2,954)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.21.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, cyto 12, extr 9, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
HIX0010163
HIT000624273 (
ENST00000525027
)
(Proprotein convertase subtilisin/kexin type 7; EC=3.4.21.-; Lymphoma proprotein convertase; Prohormone convertase 7; Proprotein convertase 7; PC7; Proprotein convertase 8; PC8; hPC8; Subtilisin/kexin-like protease PC7; Precursor;)
genome : 117,095,416 - 117,100,956 (5,541)
query : 1 - 1,312 (1,312/1,312)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.21.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 6, lyso 3, E.R._mito 3, cyto_mito 3,
mito_pero 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010163)
HIX0010155
HIT000384294
(
AK225164
)
(BUD13 homolog isoform 2.)
genome : 116,618,892 - 116,643,703 (24,812)
query : 1 - 1,787 (1,787/1,822)
10 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;0.997;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR018609 : Bud13
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16.8333, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010155)
HIX0010155
HIT000032775
(
BC006350
)
Representative transcript
(BUD13 homolog;)
genome : 116,618,892 - 116,643,704 (24,813)
query : 1 - 2,190 (2,190/2,216)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.999;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR018609 : Bud13
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 17.3333, cyto 5,
cyto_golg 3.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010155)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720794
Mus
sp. (Mouse) : AK038126
Rattus
sp. (Rat) : BC097995
Danio
sp. (Zebrafish) : BC116479
Bos
sp. (Cow) : BC140567
Tetraodon
sp. (Tetraodon) : CR647366
Equus
sp. (Horse) : ENSECAT00000009100
Oryzias
sp. (Medaka) : ENSORLT00000007144
Pongo
sp. (Orangutan) : ENSPPYT00000004644
Takifugu
sp. (Fugu) : SINFRUT00000128039
Pan
sp. (Chimpanzee) : XM_001152604
Monodelphis
sp. (Opossum) : XM_001370961
Canis
sp. (Dog) : XM_536566
Macaca
sp. (Macaque) : XR_010895
HIX0010155
HIT000210836 (
NM_032725
)
(BUD13 homolog;)
genome : 116,618,886 - 116,643,714 (24,829)
query : 1 - 2,206 (2,206/2,216)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 17.3333, cyto 5,
cyto_golg 3.66667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010155)
HIX0010155
HIT000561800 (
NM_001159736
)
(BUD13 homolog isoform 2.)
genome : 116,618,886 - 116,643,714 (24,829)
query : 1 - 1,804 (1,804/1,814)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16.8333, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010155)
HIX0010155
HIT000107670 (
ENST00000260210
)
(BUD13 homolog;)
genome : 116,618,886 - 116,643,704 (24,819)
query : 1 - 2,196 (2,196/2,196)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 17.3333, cyto 5,
cyto_golg 3.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010155)
HIX0010155
HIT000356725 (
ENST00000375445
)
(BUD13 homolog isoform 2.)
genome : 116,618,886 - 116,643,703 (24,818)
query : 1 - 1,793 (1,793/1,793)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16.8333, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010155)
HIX0010155
HIT000517123 (
ENST00000419189
)
(BUD13 homolog isoform 1.)
genome : 116,618,886 - 116,633,552 (14,667)
query : 1 - 947 (947/947)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010155)
HIX0010155
HIT000014439
(
AK057832
)
(BUD13 homolog isoform 2.)
genome : 116,618,893 - 116,643,703 (24,811)
query : 1 - 1,786 (1,786/1,786)
10 exons
identity = 0.998
3'(0.995;1.000;1.000;1.000;1.000;1.000;0.997;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR018609 : Bud13
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16.8333, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010155)
HIX0010155
HIT000422432
(
AK289635
)
(BUD13 homolog;)
genome : 116,618,893 - 116,643,703 (24,811)
query : 1 - 2,188 (2,188/2,188)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.989;1.000)5'
coverage = 1.000
InterPro :
IPR018609 : Bud13
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 17.3333, cyto 5,
cyto_golg 3.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010155)
HIX0010155
HIT000423908
(
AK291111
)
(BUD13 homolog;)
genome : 116,618,954 - 116,643,703 (24,750)
query : 1 - 2,127 (2,127/2,127)
10 exons
identity = 0.999
3'(1.000;1.000;0.995;1.000;1.000;1.000;1.000;
1.000;1.000;0.994)5'
coverage = 1.000
InterPro :
IPR018609 : Bud13
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 17.3333, cyto 5,
cyto_golg 3.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010155)
HIX0010160
pHIT000020665 ( pHIT000020665 )
(Platelet-activating factor acetylhydrolase IB subunit beta isoform a.)
genome : 117,014,949 - 117,038,415 (23,467)
query : 1 - 678 (678/678)
4 exons
EC number :
EC 3.1.1.47
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010160)
CAGE tag :
H04BA25G2103,H04BA56K2205,H04BA64G2302
H05BA07F2004,H05BA44H0603
HIX0209654
eHIT000001497 ( ESTsASS_11_480 )
Representative transcript
(Non-protein coding transcript.)
genome : 115,793,824 - 115,800,237 (6,414)
query : 1 - 472 (472/472)
4 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209654)
ESTs used for assembly :
AI693407,AI806743
AP000997.1
115500001-115575310 F -
NCBI
AP002991.3
115575311-115687294 F +
NCBI
AP000797.6
115687295-115835784 F +
NCBI
AB017651.2
115835785-115892331 F +
NCBI
AP002760.4
115892332-116104004 F +
NCBI
AP002964.2
116104005-116216119 F +
NCBI
AP002346.3
116216120-116325595 F +
NCBI
AP001891.4
116325596-116469955 F +
NCBI
AP000770.4
116469956-116581668 F +
NCBI
AP006216.1
116581669-116759002 F +
NCBI
AP003070.3
116759003-116791350 F +
NCBI
AP000936.7
116791351-117007455 F +
NCBI
AP005018.1
117007456-117072233 O +
NCBI
AP000892.4
117072234-117100000 F +
NCBI