bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0010207
HIT000220651
(
U60975
)
(Sortilin-related receptor; Low-density lipoprotein receptor relative with 11 ligand-binding repeats; LDLR relative with 11 ligand-binding repeats; LR11; SorLA-1; Sorting protein-related receptor containing LDLR class A repeats; SorLA; Precursor;)
genome : 121,322,970 - 121,500,394 (177,425)
query : 127 - 6,964 (6,838/6,981)
48 exons
identity = 0.999
5'(1.000)3'
coverage = 0.982
InterPro :
IPR000033 : LDLR class B repeat
IPR000742 : Epidermal growth factor-like domain
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
IPR003961 : Fibronectin type III
IPR006581 : VPS10
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR023415 : Low-density lipoprotein (LDL) receptor class A, conserved site
GO :
0005515 : Molecular Function : protein binding
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16.5, extr_plas 12, extr 6.5, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010207)
HIX0010207
HIT000199969_03 (
NM_003105
)
(Fibronectin type III domain containing protein.)
genome : 121,322,912 - 121,504,471 (181,560)
query : 1 - 10,973 (10,973/10,973)
48 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16.5, extr_plas 12, extr 6.5, E.R. 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010207)
HIX0010207
HIT000107669 (
ENST00000260197
)
(Fibronectin type III domain containing protein.)
genome : 121,322,912 - 121,504,402 (181,491)
query : 1 - 10,904 (10,904/10,904)
48 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16.5, extr_plas 12, extr 6.5, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010207)
HIX0010207
HIT000325376
(
Y08110
)
Representative transcript
(Sortilin-related receptor; Low-density lipoprotein receptor relative with 11 ligand-binding repeats; LDLR relative with 11 ligand-binding repeats; LR11; SorLA-1; Sorting protein-related receptor containing LDLR class A repeats; SorLA; Precursor;)
genome : 121,322,961 - 121,500,387 (177,427)
query : 1 - 6,840 (6,840/6,840)
48 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000033 : LDLR class B repeat
IPR000742 : Epidermal growth factor-like domain
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
IPR003961 : Fibronectin type III
IPR006581 : VPS10
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR023415 : Low-density lipoprotein (LDL) receptor class A, conserved site
GO :
0005515 : Molecular Function : protein binding
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16.5, extr_plas 12, extr 6.5, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010207)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB174288
Mus
sp. (Mouse) : AK147303
Tetraodon
sp. (Tetraodon) : CR713512
Danio
sp. (Zebrafish) : ENSDART00000011416
Pongo
sp. (Orangutan) : ENSPPYT00000004737
Rattus
sp. (Rat) : ENSRNOT00000059974
Monodelphis
sp. (Opossum) : XM_001370225
Equus
sp. (Horse) : XM_001501368
Canis
sp. (Dog) : XM_536545
Bos
sp. (Cow) : XM_612483
Pan
sp. (Chimpanzee) : XR_022659
Gallus
sp. (Chicken) : Y08109
HIX0010207
HIT000501129
(
BC137171
)
(Sortilin-related receptor; Low-density lipoprotein receptor relative with 11 ligand-binding repeats; LDLR relative with 11 ligand-binding repeats; LR11; SorLA-1; Sorting protein-related receptor containing LDLR class A repeats; SorLA; Precursor;)
genome : 121,322,989 - 121,500,300 (177,312)
query : 1 - 6,725 (6,725/6,725)
48 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000033 : LDLR class B repeat
IPR000742 : Epidermal growth factor-like domain
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
IPR003961 : Fibronectin type III
IPR006581 : VPS10
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR023415 : Low-density lipoprotein (LDL) receptor class A, conserved site
GO :
0005515 : Molecular Function : protein binding
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16.5, extr_plas 12, extr 6.5, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010207)
HIX0010207
HIT000490502
(
AK295878
)
(Sortilin-related receptor preproprotein.)
genome : 121,437,434 - 121,500,393 (62,960)
query : 1 - 3,836 (3,836/3,836)
28 exons
identity = 0.998
5'(0.995)3'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
IPR003961 : Fibronectin type III
IPR023415 : Low-density lipoprotein (LDL) receptor class A, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 11.5, cyto_mito 7.5, plas 6, extr_plas 5, nucl 4,
pero 4, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010207)
HIX0010207
HIT000624765 (
ENST00000525532
)
(Fibronectin type III domain containing protein.)
genome : 121,437,434 - 121,500,393 (62,960)
query : 1 - 3,836 (3,836/3,836)
28 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 6, nucl 6, cyto 6, cyto_nucl 6, cyto_plas 6,
mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010207)
HIX0010207
HIT000489714
(
AK295090
)
(Sortilin-related receptor preproprotein.)
genome : 121,447,469 - 121,500,400 (52,932)
query : 1 - 3,692 (3,692/3,692)
25 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
InterPro :
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
IPR003961 : Fibronectin type III
IPR023415 : Low-density lipoprotein (LDL) receptor class A, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 9, plas 6.5, nucl 6.5,
extr_plas 5, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010207)
HIX0010207
HIT000631789 (
ENST00000532694
)
(Fibronectin type III domain containing protein.)
genome : 121,447,469 - 121,500,400 (52,932)
query : 1 - 3,692 (3,692/3,692)
25 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 9, plas 6.5, nucl 5.5,
extr_plas 5, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010207)
HIX0010207
HIT000497213
(
AK302589
)
(Sortilin-related receptor preproprotein.)
genome : 121,447,547 - 121,500,387 (52,841)
query : 1 - 3,501 (3,501/3,501)
25 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
InterPro :
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
IPR003961 : Fibronectin type III
IPR023415 : Low-density lipoprotein (LDL) receptor class A, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9, nucl 7, mito 6.5, extr_plas 6, cyto_mito 5,
pero 3, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010207)
HIX0010207
HIT000633347 (
ENST00000534286
)
(Fibronectin type III domain containing protein.)
genome : 121,447,547 - 121,500,387 (52,841)
query : 1 - 3,501 (3,501/3,501)
25 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9, nucl 7, mito 6.5, extr_plas 6, cyto_mito 5,
pero 3, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010207)
HIX0010207
HIT000489028
(
AK294404
)
(Sortilin-related receptor preproprotein.)
genome : 121,461,128 - 121,500,393 (39,266)
query : 2 - 3,033 (3,032/3,033)
19 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
InterPro :
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
IPR003961 : Fibronectin type III
IPR023415 : Low-density lipoprotein (LDL) receptor class A, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 9, plas 8, extr_plas 5.5, mito 5, pero 5,
mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010207)
HIX0010207
HIT000627126 (
ENST00000527934
)
(Fibronectin type III domain containing protein.)
genome : 121,461,128 - 121,500,393 (39,266)
query : 1 - 3,032 (3,032/3,032)
19 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 9, plas 8, extr_plas 5.5, mito 5, pero 5,
mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010207)
HIX0010207
HIT000499953
(
AK316340
)
(Low-density lipoprotein receptor; LDL receptor; Precursor;)
genome : 121,461,545 - 121,500,448 (38,904)
query : 1 - 2,670 (2,670/2,670)
19 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
InterPro :
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
IPR003961 : Fibronectin type III
IPR023415 : Low-density lipoprotein (LDL) receptor class A, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 9, plas 8, extr_plas 5.5, mito 5, pero 5,
mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010207)
HIX0010207
HIT000626845 (
ENST00000527649
)
(Conserved hypothetical protein.)
genome : 121,496,910 - 121,500,402 (3,493)
query : 1 - 1,765 (1,765/1,765)
2 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, plas 7, E.R. 4.5, E.R._mito 3.83333, cyto 3,
mito 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010207)
HIX0010207
HIT000629515 (
ENST00000530365
)
(Hypothetical protein.)
genome : 121,499,545 - 121,502,949 (3,405)
query : 1 - 983 (983/983)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010207)
HIX0010207
HIT000096295
(
BC040643
)
(Conserved hypothetical protein.)
genome : 121,500,203 - 121,504,387 (4,185)
query : 1 - 4,191 (4,191/4,206)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11, cyto_nucl 7.5, nucl 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010207)
HIX0010207
HIT000021432
(
AK096577
)
(Conserved hypothetical protein.)
genome : 121,500,694 - 121,504,381 (3,688)
query : 1 - 3,689 (3,689/3,689)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 4.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010207)
HIX0010207
HIT000008857
(
AK025583
)
(Conserved hypothetical protein.)
genome : 121,501,769 - 121,504,396 (2,628)
query : 1 - 2,630 (2,630/2,647)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 9, extr_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010207)
HIX0010207
HIT000222218
(
U90916
)
(Conserved hypothetical protein.)
genome : 121,502,514 - 121,504,382 (1,869)
query : 1 - 1,869 (1,869/1,896)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11, cyto_nucl 7.5, nucl 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010207)
HIX0010207
HIT000092859
(
BC032903
)
(Hypothetical short protein.)
genome : 121,503,931 - 121,504,396 (466)
query : 4 - 469 (466/504)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 11.5, extr 11, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010207)
HIX0210522
HIT000646843_02
(
FM207504
)
Representative transcript
(Non-protein coding transcript.)
genome : 121,844,983 - 121,845,012 (30)
query : 3 - 32 (30/33)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 0.909
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210522)
HIX0036413
HIT000097056
(
BC042020
)
Representative transcript
(Hypothetical short protein.)
genome : 121,856,412 - 121,857,427 (1,016)
query : 1 - 1,016 (1,016/1,031)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 13, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036413)
HIX0209787
HIT000616150 (
ENST00000516747
)
(Non-protein coding transcript.)
genome : 121,875,063 - 121,875,159 (97)
query : 1 - 97 (97/97)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209787)
HIX0010208
HIT000266294
(
BC089451
)
(Conserved hypothetical protein.)
genome : 121,899,037 - 121,971,162 (72,126)
query : 1 - 1,138 (1,138/1,169)
5 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000630092 (
ENST00000530955
)
(Hypothetical short protein.)
genome : 121,899,063 - 121,972,410 (73,348)
query : 1 - 747 (747/747)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 7.5, mito_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0036622
HIT000191978
(
L09269
)
Representative transcript
(Non-protein coding transcript.)
genome : 121,921,861 - 121,922,011 (151)
query : 1 - 149 (149/149)
1 exon
identity = 0.987
3'(0.987)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036622)
HIX0010208
HIT000631425 (
ENST00000532319
)
(Conserved hypothetical protein.)
genome : 121,936,268 - 121,971,156 (34,889)
query : 1 - 950 (950/950)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 8, cyto_nucl 8, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000630595 (
ENST00000531470
)
(Hypothetical short protein.)
genome : 121,937,044 - 121,940,864 (3,821)
query : 1 - 560 (560/560)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 6, nucl 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000054842
(
BX538058
)
(Conserved hypothetical protein.)
genome : 121,959,812 - 121,971,133 (11,322)
query : 1 - 2,689 (2,689/2,725)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 10, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000056255
(
BX647608
)
(Conserved hypothetical protein.)
genome : 121,959,820 - 121,971,155 (11,336)
query : 1 - 2,684 (2,684/2,704)
2 exons
identity = 0.998
3'(0.998;0.986)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, cyto 11.5, cyto_nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000096256
(
BC040599
)
(Hypothetical short protein.)
genome : 121,959,819 - 121,971,156 (11,338)
query : 1 - 2,705 (2,705/2,720)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, cyto 10, extr_plas 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000027381
(
AL832469
)
(Conserved hypothetical protein.)
genome : 121,959,819 - 121,971,159 (11,341)
query : 2 - 2,682 (2,681/2,696)
2 exons
identity = 0.987
3'(0.987;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 10, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000562609 (
NR_024430
)
(Conserved hypothetical protein.)
genome : 121,959,811 - 122,073,770 (113,960)
query : 1 - 3,082 (3,082/3,082)
4 exons
identity = 1.000
3'(1.000;0.988;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 10, cyto_nucl 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000630509 (
ENST00000531381
)
(Hypothetical protein.)
genome : 121,959,811 - 121,972,886 (13,076)
query : 1 - 3,370 (3,370/3,370)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 10.5, cyto_nucl 7, E.R._mito 7,
mito_pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000016580
(
AK091713
)
(Hypothetical short protein.)
genome : 121,959,813 - 122,051,108 (91,296)
query : 1 - 1,932 (1,932/1,932)
4 exons
identity = 0.998
3'(0.998;0.999;0.988;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 10, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000043820
(
AK123947
)
(Conserved hypothetical protein.)
genome : 121,959,814 - 121,972,874 (13,061)
query : 1 - 3,333 (3,333/3,333)
2 exons
identity = 0.998
3'(0.998;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 10.5, cyto_nucl 7, E.R._mito 7,
mito_pero 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000628976 (
ENST00000529823
)
(Hypothetical protein.)
genome : 121,959,814 - 121,972,874 (13,061)
query : 1 - 3,334 (3,334/3,334)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 10.5, cyto_nucl 7, E.R._mito 7,
mito_pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0209674
HIT000328560
(
AB075498
)
Representative transcript
(Hypothetical short protein.)
genome : 121,959,818 - 121,963,560 (3,743)
query : 4 - 3,648 (3,645/3,648)
2 exons
identity = 0.999
5'(0.999;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, extr 9, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209674)
HIX0010208
HIT000628152 (
ENST00000528986
)
(Conserved hypothetical protein.)
genome : 121,959,818 - 121,971,737 (11,920)
query : 1 - 3,287 (3,287/3,287)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 5.5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000623638 (
ENST00000524376
)
(Conserved hypothetical protein.)
genome : 121,959,818 - 121,971,155 (11,338)
query : 1 - 2,684 (2,684/2,684)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 10, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000004826
(
AK021552
)
(Conserved hypothetical protein.)
genome : 121,959,820 - 121,962,105 (2,286)
query : 1 - 2,287 (2,287/2,287)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 10, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000630208 (
ENST00000531071
)
(Hypothetical short protein.)
genome : 121,961,763 - 121,972,405 (10,643)
query : 1 - 970 (970/970)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 9, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000430175
(
AK311309
)
(Hypothetical short protein.)
genome : 121,961,947 - 122,073,770 (111,824)
query : 1 - 946 (946/946)
4 exons
identity = 0.999
3'(1.000;0.988;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000633257 (
ENST00000534195
)
(Hypothetical short protein.)
genome : 121,961,962 - 121,975,877 (13,916)
query : 1 - 586 (586/586)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 7.5, cyto_nucl 7, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000631980 (
ENST00000532890
)
(Hypothetical short protein.)
genome : 121,961,993 - 121,972,394 (10,402)
query : 1 - 708 (708/708)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 9, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000631421 (
ENST00000532315
)
(Hypothetical protein.)
genome : 121,962,125 - 121,976,650 (14,526)
query : 1 - 1,175 (1,175/1,175)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 7, nucl 5.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000633358 (
ENST00000534297
)
(Hypothetical short protein.)
genome : 121,962,253 - 121,987,031 (24,779)
query : 1 - 387 (387/387)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 3, cyto 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010209
HIT000020646
(
AK095791
)
Representative transcript
(Hypothetical short protein.)
genome : 121,966,608 - 121,969,061 (2,454)
query : 1 - 2,454 (2,454/2,454)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, extr 5, nucl 3.5, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010209)
HIX0010209
HIT000005078
(
AK021804
)
(Hypothetical short protein.)
genome : 121,966,906 - 121,968,388 (1,483)
query : 1 - 1,483 (1,483/1,483)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, extr 5, nucl 2.5, cyto_nucl 2.5,
extr_plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010209)
HIX0036326
HIT000257681
(
AY776162
)
Representative transcript
(Hypothetical protein.)
genome : 121,969,717 - 121,970,476 (760)
query : 61 - 811 (751/865)
1 exon
identity = 0.953
3'(0.953)5'
coverage = 0.929
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 13, nucl 3.5, cyto_nucl 3.33333, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036326)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB089206
HIX0036326
HIT000471089 (
ENST00000385236
)
(Non-protein coding transcript.)
genome : 121,970,465 - 121,970,552 (88)
query : 1 - 88 (88/88)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036326)
HIX0036326
HIT000658049 (
NR_029671
)
(Non-protein coding transcript.)
genome : 121,970,465 - 121,970,552 (88)
query : 1 - 88 (88/88)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036326)
HIX0010208
HIT000629224 (
ENST00000530072
)
(Hypothetical short protein.)
genome : 121,971,386 - 121,972,394 (1,009)
query : 1 - 592 (592/592)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 3, mito 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000630752 (
ENST00000531629
)
(Hypothetical short protein.)
genome : 121,971,617 - 121,972,394 (778)
query : 1 - 562 (562/562)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 9, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000020525
(
AK095670
)
(Conserved hypothetical protein.)
genome : 121,974,130 - 121,976,217 (2,088)
query : 1 - 2,088 (2,088/2,088)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 11.5, extr_plas 9, plas 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000076705
(
AF303179
)
(BH3-like motif-containing cell death inducer; Breast cancer cell protein 2;)
genome : 121,986,062 - 121,986,923 (862)
query : 1 - 862 (862/862)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 6, extr 5, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000315508 (
NM_001001786
)
(BH3-like motif-containing cell death inducer; Breast cancer cell protein 2;)
genome : 121,986,062 - 121,986,923 (862)
query : 1 - 862 (862/862)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 7, nucl 4, cysk 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000673353 (
ENST00000560104
)
(BH3-like motif-containing cell death inducer; Breast cancer cell protein 2;)
genome : 121,986,062 - 121,986,923 (862)
query : 1 - 862 (862/862)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 7, nucl 4, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000390151
(
BC130361
)
Representative transcript
(BH3-like motif-containing cell death inducer; Breast cancer cell protein 2;)
genome : 121,986,241 - 121,986,801 (561)
query : 1 - 561 (561/561)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 7, nucl 4, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000004738
HIX0010208
HIT000390153
(
BC130363
)
(BH3-like motif-containing cell death inducer; Breast cancer cell protein 2;)
genome : 121,986,241 - 121,986,801 (561)
query : 1 - 561 (561/561)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 7, nucl 4, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0153757
HIT000343734 (
ENST00000362105
)
(Non-protein coding transcript.)
genome : 122,017,229 - 122,017,301 (73)
query : 1 - 73 (73/73)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0153757)
HIX0153757
HIT000657943 (
NR_029477
)
(Non-protein coding transcript.)
genome : 122,017,230 - 122,017,301 (72)
query : 1 - 72 (72/72)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0153757)
HIX0153759
HIT000422011
(
AF480538
)
Representative transcript
(Non-protein coding transcript.)
genome : 122,022,937 - 122,023,016 (80)
query : 1 - 80 (80/80)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0153759)
HIX0153759
HIT000471112 (
ENST00000385259
)
(Non-protein coding transcript.)
genome : 122,022,937 - 122,023,016 (80)
query : 1 - 80 (80/80)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0153759)
HIX0153759
HIT000657981 (
NR_029515
)
(Non-protein coding transcript.)
genome : 122,022,937 - 122,023,016 (80)
query : 1 - 80 (80/80)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0153759)
HIX0010208
HIT000631455 (
ENST00000532350
)
(Hypothetical short protein.)
genome : 122,026,130 - 122,073,770 (47,641)
query : 1 - 573 (573/573)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000633828 (
ENST00000534782
)
(Hypothetical short protein.)
genome : 122,026,259 - 122,073,770 (47,512)
query : 1 - 444 (444/444)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000632195 (
ENST00000533109
)
(Non-protein coding transcript.)
genome : 122,026,259 - 122,051,108 (24,850)
query : 1 - 147 (147/147)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000633552 (
ENST00000534496
)
(Hypothetical short protein.)
genome : 122,051,044 - 122,073,754 (22,711)
query : 1 - 346 (346/346)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000430599
(
AK311733
)
(Hypothetical short protein.)
genome : 122,051,046 - 122,238,681 (187,636)
query : 1 - 967 (967/967)
4 exons
identity = 0.992
3'(1.000;1.000;1.000;0.984)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 10.5, cyto_nucl 10, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000626673 (
ENST00000527474
)
(Hypothetical short protein.)
genome : 122,051,046 - 122,238,681 (187,636)
query : 1 - 959 (959/959)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 10.5, cyto_nucl 10, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000628957 (
ENST00000529804
)
(Hypothetical short protein.)
genome : 122,073,472 - 122,180,159 (106,688)
query : 1 - 468 (468/468)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000628887 (
ENST00000529733
)
(Hypothetical short protein.)
genome : 122,074,217 - 122,238,580 (164,364)
query : 1 - 584 (584/584)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 10.5, cyto_nucl 10, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0036433
HIT000264317
(
BC070362
)
Representative transcript
(Conserved hypothetical protein.)
genome : 122,092,249 - 122,094,422 (2,174)
query : 1 - 2,173 (2,173/2,196)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, mito_nucl 12.3333, nucl 8,
cyto_nucl 6.33333, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036433)
HIX0209650
eHIT000001323 ( ESTsASS_11_306 )
Representative transcript
(Non-protein coding transcript.)
genome : 122,099,067 - 122,100,966 (1,900)
query : 1 - 534 (534/534)
2 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209650)
ESTs used for assembly :
DB079110
HIX0010208
HIT000627561 (
ENST00000528381
)
(Hypothetical short protein.)
genome : 122,104,970 - 122,238,523 (133,554)
query : 1 - 554 (554/554)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 10.5, cyto_nucl 10, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0010208
HIT000625882 (
ENST00000526674
)
(Non-protein coding transcript.)
genome : 122,162,982 - 122,293,579 (130,598)
query : 1 - 310 (310/310)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010208)
HIX0209961
HIT000626304 (
ENST00000527100
)
(Conserved hypothetical protein.)
genome : 122,165,646 - 122,172,471 (6,826)
query : 1 - 507 (507/507)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209961)
HIX0209936
HIT000625985 (
ENST00000526777
)
(Hypothetical short protein.)
genome : 122,165,898 - 122,178,727 (12,830)
query : 1 - 571 (571/571)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 6.16667, nucl 5, cyto 5,
cyto_pero 4.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209936)
HIX0209790
HIT000616370 (
ENST00000516967
)
(Non-protein coding transcript.)
genome : 122,319,918 - 122,320,039 (122)
query : 1 - 122 (122/122)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209790)
HIX0209794
HIT000616629 (
ENST00000517226
)
(Non-protein coding transcript.)
genome : 122,322,182 - 122,322,307 (126)
query : 1 - 126 (126/126)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209794)
HIX0209883
HIT000625228 (
ENST00000526011
)
(Glutamine synthetase, beta-Grasp domain containing protein.)
genome : 122,484,152 - 122,485,194 (1,043)
query : 1 - 1,043 (1,043/1,043)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 10.5, extr 8, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209883)
HIX0210243
HIT000630845 (
ENST00000531724
)
(Conserved hypothetical protein.)
genome : 122,489,559 - 122,489,982 (424)
query : 1 - 424 (424/424)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, extr 13, cyto_nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210243)
HIX0010211
HIT000112466 (
ENST00000284273
)
(Ubiquitin-associated and SH3 domain-containing protein B; EC=3.1.3.48; Cbl-interacting protein p70; Suppressor of T-cell receptor signaling 1; STS-1; T-cell ubiquitin ligand 2; TULA-2; Tyrosine-protein phosphatase STS1/TULA2;)
genome : 122,526,383 - 122,685,181 (158,799)
query : 1 - 6,912 (6,912/6,912)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 17, nucl 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010211)
HIX0010211
HIT000210960 (
NM_032873
)
(Ubiquitin-associated and SH3 domain-containing protein B; EC=3.1.3.48; Cbl-interacting protein p70; Suppressor of T-cell receptor signaling 1; STS-1; T-cell ubiquitin ligand 2; TULA-2; Tyrosine-protein phosphatase STS1/TULA2;)
genome : 122,526,398 - 122,685,187 (158,790)
query : 1 - 6,903 (6,903/6,917)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 17, nucl 14
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010211)
HIX0010211
HIT000082238
(
AK075203
)
(Ubiquitin-associated and SH3 domain-containing protein B; EC=3.1.3.48; Cbl-interacting protein p70; Suppressor of T-cell receptor signaling 1; STS-1; T-cell ubiquitin ligand 2; TULA-2; Tyrosine-protein phosphatase STS1/TULA2;)
genome : 122,526,430 - 122,680,616 (154,187)
query : 1 - 2,300 (2,300/2,300)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;1.000;0.993;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.48
InterPro :
IPR000449 : Ubiquitin-associated domain/translation elongation factor EF-Ts, N-terminal
IPR001452 : SH3 domain
IPR009060 : UBA-like
IPR013078 : Histidine phosphatase superfamily, clade-1
IPR015940 : Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
IPR029033 : Histidine phosphatase superfamily
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 17, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010211)
HIX0010211
HIT000624939 (
ENST00000525711
)
(Ubiquitin-associated and SH3 domain-containing protein B.)
genome : 122,526,433 - 122,598,307 (71,875)
query : 1 - 572 (572/572)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, extr 11, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010211)
HIX0010211
HIT000033287
(
BC007541
)
(Ubiquitin-associated and SH3 domain-containing protein B; EC=3.1.3.48; Cbl-interacting protein p70; Suppressor of T-cell receptor signaling 1; STS-1; T-cell ubiquitin ligand 2; TULA-2; Tyrosine-protein phosphatase STS1/TULA2;)
genome : 122,526,444 - 122,681,872 (155,429)
query : 1 - 3,543 (3,543/3,560)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.1.3.48
InterPro :
IPR000449 : Ubiquitin-associated domain/translation elongation factor EF-Ts, N-terminal
IPR001452 : SH3 domain
IPR009060 : UBA-like
IPR013078 : Histidine phosphatase superfamily, clade-1
IPR015940 : Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
IPR029033 : Histidine phosphatase superfamily
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 17, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010211)
HIX0010211
HIT000330623
(
AK222843
)
(Ubiquitin-associated and SH3 domain-containing protein B; EC=3.1.3.48; Cbl-interacting protein p70; Suppressor of T-cell receptor signaling 1; STS-1; T-cell ubiquitin ligand 2; TULA-2; Tyrosine-protein phosphatase STS1/TULA2;)
genome : 122,526,448 - 122,680,613 (154,166)
query : 1 - 2,279 (2,279/2,295)
14 exons
identity = 0.997
5'(0.996;0.981;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;0.989;1.000;1.000;1.000;0.994)3'
coverage = 1.000
EC number :
EC 3.1.3.48
InterPro :
IPR000449 : Ubiquitin-associated domain/translation elongation factor EF-Ts, N-terminal
IPR001452 : SH3 domain
IPR009060 : UBA-like
IPR013078 : Histidine phosphatase superfamily, clade-1
IPR015940 : Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
IPR029033 : Histidine phosphatase superfamily
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 17, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010211)
HIX0010211
HIT000330626
(
AK222846
)
(Ubiquitin-associated and SH3 domain-containing protein B; EC=3.1.3.48; Cbl-interacting protein p70; Suppressor of T-cell receptor signaling 1; STS-1; T-cell ubiquitin ligand 2; TULA-2; Tyrosine-protein phosphatase STS1/TULA2;)
genome : 122,526,448 - 122,680,613 (154,166)
query : 1 - 2,279 (2,279/2,295)
14 exons
identity = 0.997
5'(0.996;0.981;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;0.989;1.000;1.000;1.000;0.994)3'
coverage = 1.000
EC number :
EC 3.1.3.48
InterPro :
IPR000449 : Ubiquitin-associated domain/translation elongation factor EF-Ts, N-terminal
IPR001452 : SH3 domain
IPR009060 : UBA-like
IPR013078 : Histidine phosphatase superfamily, clade-1
IPR015940 : Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
IPR029033 : Histidine phosphatase superfamily
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 17, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010211)
HIX0010211
HIT000001674
(
AB075839
)
Representative transcript
(Ubiquitin-associated and SH3 domain-containing protein B; EC=3.1.3.48; Cbl-interacting protein p70; Suppressor of T-cell receptor signaling 1; STS-1; T-cell ubiquitin ligand 2; TULA-2; Tyrosine-protein phosphatase STS1/TULA2;)
genome : 122,526,546 - 122,683,153 (156,608)
query : 1 - 4,722 (4,722/4,722)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 17, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010211)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK154576
Gallus
sp. (Chicken) : CR390572
Equus
sp. (Horse) : ENSECAT00000019982
Oryzias
sp. (Medaka) : ENSORLT00000009650
Pongo
sp. (Orangutan) : ENSPPYT00000004739
Tetraodon
sp. (Tetraodon) : GSTENT00022118001
Tetraodon
sp. (Tetraodon) : GSTENT00026827001
Danio
sp. (Zebrafish) : NM_001128755
Takifugu
sp. (Fugu) : SINFRUT00000134339
Takifugu
sp. (Fugu) : SINFRUT00000179623
Rattus
sp. (Rat) : XM_001065047
Macaca
sp. (Macaque) : XM_001107573
Monodelphis
sp. (Opossum) : XM_001380124
Danio
sp. (Zebrafish) : XM_001923850
Pan
sp. (Chimpanzee) : XM_508828
Canis
sp. (Dog) : XM_546473
Bos
sp. (Cow) : XM_864208
HIX0010211
HIT000625597 (
ENST00000526386
)
(Ubiquitin-associated and SH3 domain-containing protein B.)
genome : 122,579,970 - 122,650,303 (70,334)
query : 1 - 553 (553/553)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 5, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010211)
HIX0010211
HIT000630055 (
ENST00000530917
)
(Ubiquitin-associated and SH3 domain-containing protein B; EC=3.1.3.48; Cbl-interacting protein p70; Suppressor of T-cell receptor signaling 1; STS-1; T-cell ubiquitin ligand 2; TULA-2; Tyrosine-protein phosphatase STS1/TULA2;)
genome : 122,644,804 - 122,660,016 (15,213)
query : 1 - 987 (987/987)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15.5, cyto 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010211)
HIX0010211
HIT000632532 (
ENST00000533451
)
(Ubiquitin-associated and SH3 domain-containing protein B.)
genome : 122,646,342 - 122,650,410 (4,069)
query : 1 - 1,032 (1,032/1,032)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 10.5, cyto_nucl 9, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010211)
HIX0010211
HIT000079432
(
AF425252
)
(Ubiquitin-associated and SH3 domain-containing protein B.)
genome : 122,647,860 - 122,681,874 (34,015)
query : 1 - 2,886 (2,886/2,889)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;0.995;0.992;1.000;1.000;
1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.999
EC number :
EC 3.1.3.48
InterPro :
IPR001452 : SH3 domain
IPR013078 : Histidine phosphatase superfamily, clade-1
IPR029033 : Histidine phosphatase superfamily
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13.5, nucl 8, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010211)
HIX0010211
HIT000629150 (
ENST00000529998
)
(Ubiquitin-associated and SH3 domain-containing protein B.)
genome : 122,650,085 - 122,660,016 (9,932)
query : 1 - 698 (698/698)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 12, nucl 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010211)
HIX0010211
HIT000625704 (
ENST00000526493
)
(Ubiquitin-associated and SH3 domain-containing protein B.)
genome : 122,653,072 - 122,665,504 (12,433)
query : 1 - 1,163 (1,163/1,163)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, mito 8, cyto_nucl 8, extr 6, cyto_pero 6,
cyto_plas 6, mito_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010211)
HIX0010211
HIT000629724 (
ENST00000530578
)
(Ubiquitin-associated and SH3 domain-containing protein B.)
genome : 122,665,486 - 122,667,972 (2,487)
query : 1 - 532 (532/532)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, cyto 4.5, cyto_nucl 4.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010211)
HIX0010211
HIT000028004
(
AL833092
)
(Hypothetical protein.)
genome : 122,680,776 - 122,685,181 (4,406)
query : 1 - 4,408 (4,408/4,424)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11.8333, cyto_pero 9.66667,
extr 7, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010211)
HIX0036294
HIT000016878
(
AK092011
)
Representative transcript
(Conserved hypothetical protein.)
genome : 122,681,832 - 122,683,993 (2,162)
query : 1 - 2,162 (2,162/2,162)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 11.5, mito_pero 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036294)
HIX0035844
HIT000264224
(
BC070266
)
Representative transcript
(Cytotoxic and regulatory T-cell molecule; Class-I MHC-restricted T-cell-associated molecule; AltName: CD_antigen=CD355; Precursor;)
genome : 122,709,206 - 122,743,341 (34,136)
query : 1 - 2,465 (2,465/2,494)
10 exons
identity = 0.998
5'(1.000;1.000;0.993;1.000;1.000;1.000;1.000;
0.993;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR013162 : CD80-like, immunoglobulin C2-set
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 11, extr_plas 8, plas 7.5, extr 7.5, nucl 3,
cyto 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035844)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF001104
Gallus
sp. (Chicken) : AF035677
Bos
sp. (Cow) : BC134770
Equus
sp. (Horse) : ENSECAT00000007846
Monodelphis
sp. (Opossum) : ENSMODT00000016549
Pongo
sp. (Orangutan) : ENSPPYT00000004740
Rattus
sp. (Rat) : ENSRNOT00000010792
Macaca
sp. (Macaque) : XM_001107752
Pan
sp. (Chimpanzee) : XM_001136009
Canis
sp. (Dog) : XM_847764
HIX0035844
HIT000104025 (
ENST00000227348
)
(Cytotoxic and regulatory T-cell molecule; Class-I MHC-restricted T-cell-associated molecule; AltName: CD_antigen=CD355; Precursor;)
genome : 122,709,208 - 122,743,347 (34,140)
query : 1 - 2,469 (2,469/2,469)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 11, extr_plas 8, plas 7.5, extr 7.5, nucl 3,
cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035844)
HIX0035844
HIT000432444
(
AK313578
)
(Cytotoxic and regulatory T-cell molecule; Class-I MHC-restricted T-cell-associated molecule; AltName: CD_antigen=CD355; Precursor;)
genome : 122,709,208 - 122,742,107 (32,900)
query : 1 - 1,229 (1,229/1,229)
10 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.986;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013162 : CD80-like, immunoglobulin C2-set
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 10, extr 8.5, extr_plas 8.5, plas 7.5, nucl 3,
cyto 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035844)
HIX0035844
HIT000061649
(
AF001622
)
(Cytotoxic and regulatory T-cell molecule; Class-I MHC-restricted T-cell-associated molecule; AltName: CD_antigen=CD355; Precursor;)
genome : 122,709,255 - 122,743,347 (34,093)
query : 1 - 2,422 (2,422/2,425)
10 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;0.996)3'
coverage = 0.999
InterPro :
IPR013162 : CD80-like, immunoglobulin C2-set
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 10, extr 8.5, extr_plas 8.5, plas 7.5, nucl 3,
cyto 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035844)
HIX0035844
HIT000207650 (
NM_019604
)
(Cytotoxic and regulatory T-cell molecule; Class-I MHC-restricted T-cell-associated molecule; AltName: CD_antigen=CD355; Precursor;)
genome : 122,709,255 - 122,743,347 (34,093)
query : 1 - 2,422 (2,422/2,422)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 11, extr_plas 8, plas 7.5, extr 7.5, nucl 3,
cyto 3, cyto_nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035844)
HIX0035844
HIT000632784 (
ENST00000533709
)
(Cytotoxic and regulatory T-cell molecule precursor.)
genome : 122,733,011 - 122,743,345 (10,335)
query : 1 - 1,929 (1,929/1,929)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, plas 5, pero 5, nucl 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035844)
HIX0035844
HIT000488094
(
AK293470
)
(Cytotoxic and regulatory T-cell molecule precursor.)
genome : 122,733,090 - 122,742,696 (9,607)
query : 1 - 1,201 (1,201/1,201)
5 exons
identity = 0.998
5'(1.000;1.000;0.993;1.000;0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, pero 6, plas 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035844)
HIX0035844
HIT000329765
(
AB209830
)
(Cytotoxic and regulatory T-cell molecule precursor.)
genome : 122,733,110 - 122,743,345 (10,236)
query : 1 - 1,830 (1,830/1,830)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, plas 5, pero 5, nucl 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035844)
HIX0035844
HIT000632497 (
ENST00000533416
)
(Cytotoxic and regulatory T-cell molecule precursor.)
genome : 122,735,299 - 122,742,205 (6,907)
query : 1 - 592 (592/592)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 13, extr 11, plas 3, cyto 3, cyto_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035844)
HIX0010212
HIT000209496 (
NM_024806
)
(Protein of unknown function DUF4591 family protein.)
genome : 122,753,236 - 122,830,430 (77,195)
query : 1 - 3,148 (3,148/3,160)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 13.5, mito 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010212)
HIX0010212
HIT000319615 (
NM_199124
)
(Conserved hypothetical protein.)
genome : 122,753,236 - 122,776,594 (23,359)
query : 1 - 2,113 (2,113/2,130)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, mito 12
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010212)
HIX0010212
HIT000117604 (
ENST00000307257
)
(Conserved hypothetical protein.)
genome : 122,753,391 - 122,776,600 (23,210)
query : 1 - 1,964 (1,964/1,964)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, mito 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010212)
HIX0010212
HIT000022388
(
AK097534
)
(Conserved hypothetical protein.)
genome : 122,753,391 - 122,776,583 (23,193)
query : 1 - 1,947 (1,947/1,947)
4 exons
identity = 0.999
5'(0.997;1.000;0.998;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, mito 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010212)
HIX0010212
HIT000263064
(
BC068507
)
Representative transcript
(Protein of unknown function DUF4591 family protein.)
genome : 122,753,473 - 122,830,430 (76,958)
query : 1 - 2,911 (2,911/2,926)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998)3'
coverage = 1.000
InterPro :
IPR027968 : Protein of unknown function DUF4591
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 13.5, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010212)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK016487
Bos
sp. (Cow) : BC111348
Canis
sp. (Dog) : ENSCAFT00000018556
Equus
sp. (Horse) : ENSECAT00000011227
Gallus
sp. (Chicken) : ENSGALT00000040926
Monodelphis
sp. (Opossum) : ENSMODT00000016519
Pongo
sp. (Orangutan) : ENSPPYT00000004741
Pan
sp. (Chimpanzee) : ENSPTRT00000008165
Macaca
sp. (Macaque) : XM_001107883
Rattus
sp. (Rat) : XM_236102
HIX0010212
HIT000104026 (
ENST00000227349
)
(Protein of unknown function DUF4591 family protein.)
genome : 122,753,473 - 122,830,429 (76,957)
query : 1 - 2,910 (2,910/2,910)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 13.5, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010212)
HIX0010212
HIT000424422
(
AK291625
)
(Protein of unknown function DUF4591 family protein.)
genome : 122,753,633 - 122,830,288 (76,656)
query : 1 - 2,609 (2,609/2,609)
9 exons
identity = 0.999
5'(1.000;1.000;0.998;1.000;1.000;1.000;1.000;
1.000;0.994)3'
coverage = 1.000
InterPro :
IPR027968 : Protein of unknown function DUF4591
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 13.5, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010212)
HIX0010212
HIT000630446 (
ENST00000531316
)
(Protein of unknown function DUF4591 family protein.)
genome : 122,756,466 - 122,830,506 (74,041)
query : 1 - 2,782 (2,782/2,782)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 13.5, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010212)
HIX0010212
HIT000034594
(
BC009820
)
(Conserved hypothetical protein.)
genome : 122,756,657 - 122,776,594 (19,938)
query : 40 - 1,519 (1,480/1,536)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.974
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010212)
HIX0010212
HIT000010481
(
AK027207
)
(Protein of unknown function DUF4591 family protein.)
genome : 122,756,669 - 122,830,430 (73,762)
query : 1 - 2,503 (2,503/2,521)
8 exons
identity = 0.996
5'(0.991;1.000;0.982;1.000;1.000;1.000;1.000;
0.987)3'
coverage = 1.000
InterPro :
IPR027968 : Protein of unknown function DUF4591
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 16, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010212)
HIX0010212
HIT000633420 (
ENST00000534362
)
(Conserved hypothetical protein.)
genome : 122,805,748 - 122,818,232 (12,485)
query : 1 - 1,063 (1,063/1,063)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010212)
HIX0209910
HIT000625614 (
ENST00000526403
)
(Conserved hypothetical protein.)
genome : 122,831,035 - 122,831,794 (760)
query : 1 - 760 (760/760)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 8.5, cyto_nucl 8, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209910)
HIX0036604
HIT000135665 (
ENST00000343035
)
(Brain-specific homeobox protein homolog.)
genome : 122,848,278 - 122,852,428 (4,151)
query : 1 - 830 (830/830)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036604)
HIX0036604
pHIT000020879 ( pHIT000020879 )
(Brain-specific homeobox protein homolog.)
genome : 122,848,357 - 122,855,094 (6,738)
query : 1 - 1,161 (1,161/1,161)
4 exons
InterPro :
IPR017970 : Homeobox, conserved site
IPR020479 : Homeodomain, metazoa
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036604)
CAGE tag :
H05BF88I1907
HIX0036604
HIT000485158 (
NM_001098169
)
(Brain-specific homeobox protein homolog.)
genome : 122,848,357 - 122,852,379 (4,023)
query : 1 - 702 (702/702)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036604)
HIX0036604
HIT000329978
(
AB231738
)
Representative transcript
(Brain-specific homeobox protein homolog.)
genome : 122,852,117 - 122,852,336 (220)
query : 1 - 220 (220/237)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 0.928
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 15, nucl 12, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036604)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AY233396
Gallus
sp. (Chicken) : AY500594
Danio
sp. (Zebrafish) : AY515251
Pongo
sp. (Orangutan) : ENSPPYT00000004742
Rattus
sp. (Rat) : ENSRNOT00000028909
Takifugu
sp. (Fugu) : SINFRUT00000152475
Macaca
sp. (Macaque) : XM_001107998
Monodelphis
sp. (Opossum) : XM_001370196
Equus
sp. (Horse) : XM_001503370
Pan
sp. (Chimpanzee) : XM_522208
Bos
sp. (Cow) : XM_867133
HIX0129446
HIT000563391 (
NR_027288
)
(Molybdenum cofactor biosynthesis, MoeB domain containing protein.)
genome : 122,888,274 - 122,890,319 (2,046)
query : 1 - 2,046 (2,046/2,046)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 7, nucl 3, pero 3, mito 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0129446)
HIX0129446
HIT000631156 (
ENST00000532044
)
(Molybdenum cofactor biosynthesis, MoeB domain containing protein.)
genome : 122,888,346 - 122,889,369 (1,024)
query : 1 - 1,024 (1,024/1,024)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 7, nucl 3, pero 3, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0129446)
HIX0129446
pHIT000111101 ( pHIT000111101 )
Representative transcript
(Conserved hypothetical protein.)
genome : 122,888,403 - 122,889,372 (970)
query : 1 - 678 (678/678)
2 exons
InterPro :
IPR009036 : Molybdenum cofactor biosynthesis, MoeB
IPR016040 : NAD(P)-binding domain
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0129446)
CAGE tag :
T11R074C41DB
HIX0209708
HIT000574478 (
ENST00000469983
)
(Ribosomal protein L34Ae family protein.)
genome : 122,906,575 - 122,906,932 (358)
query : 1 - 358 (358/358)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 11.5, cyto_nucl 8.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209708)
HIX0209758
HIT000600487 (
ENST00000497201
)
(Ribosomal protein S26e family protein.)
genome : 122,920,495 - 122,921,061 (567)
query : 1 - 299 (299/299)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209758)
HIX0209725
HIT000583630 (
ENST00000479573
)
(Ribosomal protein L31e family protein.)
genome : 122,921,869 - 122,922,109 (241)
query : 1 - 241 (241/241)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 12.6667, cyto_plas 10.3333, extr 5,
nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209725)
HIX0010213
HIT000020955
(
AK096100
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,928,200 - 122,932,844 (4,645)
query : 1 - 2,186 (2,186/2,229)
9 exons
identity = 1.000
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13.5, nucl 10.5, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000037498
(
BC016179
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,928,202 - 122,932,824 (4,623)
query : 1 - 2,239 (2,239/2,276)
9 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.981)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13.5, nucl 10.5, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000033112
(
BC007276
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,928,200 - 122,931,857 (3,658)
query : 1 - 2,008 (2,008/2,031)
8 exons
identity = 1.000
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, nucl 13, cyto_golg 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000002306
(
AF217511
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,928,200 - 122,929,536 (1,337)
query : 39 - 904 (866/923)
3 exons
identity = 0.967
3'(1.000;0.996;0.865)5'
coverage = 0.958
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12.5, cyto_plas 11.3333, mito 5,
extr 3, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000037619
(
BC016660
)
Representative transcript
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,928,200 - 122,932,824 (4,625)
query : 1 - 2,241 (2,241/2,259)
9 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.981)5'
coverage = 0.998
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13.5, nucl 10.5, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB072749
Equus
sp. (Horse) : AB292109
Gallus
sp. (Chicken) : AJ004940
Mus
sp. (Mouse) : AK169293
Bos
sp. (Cow) : BC105182
Danio
sp. (Zebrafish) : BC154755
Tetraodon
sp. (Tetraodon) : CR664071
Pongo
sp. (Orangutan) : CR859135
Oryzias
sp. (Medaka) : EF537020
Pan
sp. (Chimpanzee) : ENSPTRT00000008168
Rattus
sp. (Rat) : ENSRNOT00000044608
Takifugu
sp. (Fugu) : SINFRUT00000149686
Monodelphis
sp. (Opossum) : XM_001380056
Canis
sp. (Dog) : XM_854379
HIX0010213
HIT000003046
(
AK000571
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,928,202 - 122,929,193 (992)
query : 17 - 676 (660/696)
2 exons
identity = 0.997
3'(0.998;0.996)5'
coverage = 0.976
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15, nucl 5.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000087169
(
BC008907
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,928,202 - 122,929,809 (1,608)
query : 1 - 901 (901/919)
4 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_pero 14.5, pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000203186 (
NM_006597
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,928,200 - 122,932,901 (4,702)
query : 1 - 2,318 (2,318/2,331)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13.5, nucl 10.5, cysk 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000214199 (
NM_153201
)
(Heat shock cognate 71 kDa protein isoform 2.)
genome : 122,928,200 - 122,932,901 (4,702)
query : 1 - 1,859 (1,859/1,872)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 13, cyto_nucl 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000330408
(
AK222628
)
(Heat shock cognate 71 kDa protein isoform 2.)
genome : 122,928,200 - 122,932,841 (4,642)
query : 1 - 1,799 (1,799/1,812)
8 exons
identity = 0.998
3'(1.000;1.000;0.990;1.000;1.000;1.000;1.000;
0.971)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 12.5, cyto 12.5, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000088783
(
BC015699
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,928,202 - 122,929,960 (1,759)
query : 1 - 1,052 (1,052/1,066)
4 exons
identity = 0.998
3'(0.998;1.000;0.995;1.000)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 7, extr 6, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000038685
(
BC019816
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,928,205 - 122,932,824 (4,620)
query : 1 - 2,236 (2,236/2,250)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13.5, nucl 10.5, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000328473
(
AB073886
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,928,197 - 122,931,987 (3,791)
query : 1 - 2,141 (2,141/2,142)
8 exons
identity = 1.000
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15, nucl 10.5, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000551722 (
ENST00000453788
)
(Heat shock cognate 71 kDa protein isoform 2.)
genome : 122,928,197 - 122,933,043 (4,847)
query : 1 - 2,004 (2,004/2,004)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 13, cyto_nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000633676 (
ENST00000534624
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,928,197 - 122,933,043 (4,847)
query : 1 - 2,463 (2,463/2,463)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13.5, nucl 10.5, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000632618 (
ENST00000533540
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,928,197 - 122,932,844 (4,648)
query : 1 - 1,826 (1,826/1,826)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 13, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000631733 (
ENST00000532636
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,928,197 - 122,932,497 (4,301)
query : 1 - 2,306 (2,306/2,306)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13.5, nucl 10.5, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000049156
(
AK129885
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,928,201 - 122,932,844 (4,644)
query : 1 - 2,261 (2,261/2,261)
9 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;0.996;0.987;1.000;
0.967;1.000)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 16.8333, nucl 12.5, cyto_plas 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000631203 (
ENST00000532091
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,928,204 - 122,931,134 (2,931)
query : 1 - 2,301 (2,301/2,301)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 13, nucl 3.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000104027 (
ENST00000227378
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,928,205 - 122,932,040 (3,836)
query : 1 - 2,186 (2,186/2,186)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13.5, nucl 10.5, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000424864
(
AK292067
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,928,206 - 122,931,094 (2,889)
query : 1 - 1,884 (1,884/1,884)
6 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, nucl 5, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000633380 (
ENST00000534319
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,928,206 - 122,931,094 (2,889)
query : 1 - 1,884 (1,884/1,884)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, nucl 5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000078246
(
AF352832
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,928,362 - 122,932,829 (4,468)
query : 2 - 2,085 (2,084/2,085)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13.5, nucl 10.5, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000498559
(
AK303935
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,928,385 - 122,932,844 (4,460)
query : 1 - 1,846 (1,846/1,846)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.998;1.000;0.995;
1.000)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000330565
(
AK222785
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,928,390 - 122,932,841 (4,452)
query : 1 - 2,068 (2,068/2,068)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13.5, nucl 10.5, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000625325 (
ENST00000526110
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,928,409 - 122,932,039 (3,631)
query : 1 - 1,924 (1,924/1,924)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13.5, nucl 10.5, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000059114
(
AB034951
)
(Heat shock cognate 71 kDa protein isoform 2.)
genome : 122,928,431 - 122,932,807 (4,377)
query : 1 - 1,534 (1,534/1,534)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 13, cyto_nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000623808 (
ENST00000524552
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,928,487 - 122,930,156 (1,670)
query : 1 - 963 (963/963)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto_nucl 5, cyto 4.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000625894 (
ENST00000526686
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,928,587 - 122,929,805 (1,219)
query : 1 - 740 (740/740)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 14.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000632323 (
ENST00000533238
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,929,499 - 122,932,847 (3,349)
query : 1 - 465 (465/465)
5 exons
identity = 0.985
3'(1.000;1.000;0.931;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 17, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000626070_01 (
ENST00000526862
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,929,864 - 122,930,931 (1,068)
query : 1 - 504 (504/504)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14, extr 6, cysk 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000429333
(
AK310467
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,929,941 - 122,932,915 (2,975)
query : 1 - 1,509 (1,509/1,509)
5 exons
identity = 0.999
3'(1.000;1.000;0.995;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 14.5, cyto 12, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000627175 (
ENST00000527983
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,929,941 - 122,932,915 (2,975)
query : 1 - 1,509 (1,509/1,509)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 14.5, cyto 12, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000627474 (
ENST00000528292
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,930,184 - 122,932,832 (2,649)
query : 1 - 1,112 (1,112/1,112)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, E.R. 8, cyto 6, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000631874 (
ENST00000532780
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,930,522 - 122,933,377 (2,856)
query : 1 - 1,194 (1,194/1,194)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000495028
(
AK300404
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,930,522 - 122,933,186 (2,665)
query : 15 - 1,017 (1,003/1,017)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.986
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000624698 (
ENST00000525463
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,930,673 - 122,932,844 (2,172)
query : 1 - 583 (583/583)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 17, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000631278 (
ENST00000532167
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,930,690 - 122,932,844 (2,155)
query : 1 - 570 (570/570)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000624853 (
ENST00000525624
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,930,826 - 122,933,938 (3,113)
query : 1 - 1,048 (1,048/1,048)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 16.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000633622_01 (
ENST00000534567
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,930,837 - 122,932,191 (1,355)
query : 1 - 588 (588/588)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 16.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000626588_01 (
ENST00000527387
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,930,854 - 122,933,060 (2,207)
query : 1 - 579 (579/579)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000631292 (
ENST00000532182
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,930,873 - 122,932,730 (1,858)
query : 1 - 674 (674/674)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 17, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000623843 (
ENST00000524590
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,931,301 - 122,932,740 (1,440)
query : 1 - 536 (536/536)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 16, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000629541 (
ENST00000530391
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,931,315 - 122,932,541 (1,227)
query : 1 - 648 (648/648)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 16.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000630200 (
ENST00000531063
)
(Heat shock cognate 71 kDa protein; Heat shock 70 kDa protein 8;)
genome : 122,931,533 - 122,932,844 (1,312)
query : 1 - 578 (578/578)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000458457
(
DQ591926
)
(Non-protein coding transcript.)
genome : 122,931,953 - 122,931,982 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010213
HIT000386741
(
BC113038
)
(Hypothetical short protein.)
genome : 122,932,213 - 122,932,553 (341)
query : 10 - 350 (341/358)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 0.953
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, extr 11, cyto_nucl 10, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010213)
HIX0010214
HIT000034315
(
BC009371
)
(CXADR-like membrane protein; Adipocyte adhesion molecule; Coxsackie- and adenovirus receptor-like membrane protein; CAR-like membrane protein; Precursor;)
genome : 122,943,034 - 123,065,659 (122,626)
query : 1 - 2,281 (2,281/2,298)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11, extr_plas 11, extr 9, pero 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010214)
HIX0010214
HIT000209462 (
NM_024769
)
(CXADR-like membrane protein; Adipocyte adhesion molecule; Coxsackie- and adenovirus receptor-like membrane protein; CAR-like membrane protein; Precursor;)
genome : 122,943,034 - 123,066,007 (122,974)
query : 1 - 2,629 (2,629/2,645)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.997)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11, extr_plas 11, extr 9, pero 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010214)
HIX0010214
HIT000009342
(
AK026068
)
Representative transcript
(CXADR-like membrane protein; Adipocyte adhesion molecule; Coxsackie- and adenovirus receptor-like membrane protein; CAR-like membrane protein; Precursor;)
genome : 122,943,034 - 123,065,989 (122,956)
query : 1 - 2,611 (2,611/2,627)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.995)5'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11, extr_plas 11, extr 9, pero 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010214)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF302047
Mus
sp. (Mouse) : AK028983
Gallus
sp. (Chicken) : BX935530
Bos
sp. (Cow) : ENSBTAT00000026710
Danio
sp. (Zebrafish) : ENSDART00000009857
Monodelphis
sp. (Opossum) : ENSMODT00000016503
Oryzias
sp. (Medaka) : ENSORLT00000006436
Oryzias
sp. (Medaka) : ENSORLT00000016795
Pongo
sp. (Orangutan) : ENSPPYT00000004744
Pan
sp. (Chimpanzee) : ENSPTRT00000008169
Tetraodon
sp. (Tetraodon) : GSTENT00016318001
Tetraodon
sp. (Tetraodon) : GSTENT00022094001
Takifugu
sp. (Fugu) : SINFRUT00000143110
Takifugu
sp. (Fugu) : SINFRUT00000148056
Macaca
sp. (Macaque) : XM_001108111
Equus
sp. (Horse) : XM_001501513
Danio
sp. (Zebrafish) : XM_001920129
Canis
sp. (Dog) : XM_546471
HIX0010214
HIT000546709 (
ENST00000448775
)
(CXADR-like membrane protein; Adipocyte adhesion molecule; Coxsackie- and adenovirus receptor-like membrane protein; CAR-like membrane protein; Precursor;)
genome : 122,943,035 - 123,065,989 (122,955)
query : 1 - 2,610 (2,610/2,610)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11, extr_plas 11, extr 9, pero 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010214)
HIX0010214
HIT000251778
(
AY326422
)
(CXADR-like membrane protein; Adipocyte adhesion molecule; Coxsackie- and adenovirus receptor-like membrane protein; CAR-like membrane protein; Precursor;)
genome : 122,943,035 - 123,065,837 (122,803)
query : 1 - 2,458 (2,458/2,458)
7 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;0.995)5'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11, extr_plas 11, extr 9, pero 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010214)
HIX0010214
HIT000252384
(
AY358340
)
(CXADR-like membrane protein; Adipocyte adhesion molecule; Coxsackie- and adenovirus receptor-like membrane protein; CAR-like membrane protein; Precursor;)
genome : 122,943,035 - 123,065,837 (122,803)
query : 1 - 2,458 (2,458/2,458)
7 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;0.995)5'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11, extr_plas 11, extr 9, pero 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010214)
HIX0010214
HIT000499467
(
AK304843
)
(CXADR-like membrane protein precursor.)
genome : 122,944,111 - 123,065,947 (121,837)
query : 14 - 1,278 (1,265/1,278)
7 exons
identity = 0.998
3'(1.000;1.000;0.949;1.000;1.000;1.000;0.997)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, cyto 5, mito 4.5, E.R._mito 3.5,
cyto_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010214)
HIX0010214
HIT000629521 (
ENST00000530371
)
(CXADR-like membrane protein precursor.)
genome : 122,944,193 - 122,954,444 (10,252)
query : 1 - 585 (585/585)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010214)
HIX0010214
HIT000627169 (
ENST00000527977
)
(CXADR-like membrane protein precursor.)
genome : 122,944,414 - 122,955,422 (11,009)
query : 1 - 712 (712/712)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 8, nucl 7, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010214)
HIX0010214
HIT000628294 (
ENST00000529128
)
(CXADR-like membrane protein precursor.)
genome : 122,953,790 - 122,968,674 (14,885)
query : 1 - 668 (668/668)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 10, cyto_nucl 9, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010214)
HIX0171384
HIT000442512_04
(
DQ575981
)
Representative transcript
(Non-protein coding transcript.)
genome : 122,966,202 - 122,966,232 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171384)
HIX0209985
HIT000626554 (
ENST00000527351
)
(FUN14 family protein.)
genome : 123,006,631 - 123,007,084 (454)
query : 1 - 454 (454/454)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 11, nucl 10, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209985)
HIX0210241
HIT000630802 (
ENST00000531681
)
(Hypothetical short protein.)
genome : 123,059,510 - 123,098,985 (39,476)
query : 1 - 701 (701/701)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 7.5, nucl 6.5, cyto 5.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210241)
HIX0036604
pHIT000020879 ( pHIT000020879 )
(Brain-specific homeobox protein homolog.)
genome : 122,848,357 - 122,855,094 (6,738)
query : 1 - 1,161 (1,161/1,161)
4 exons
InterPro :
IPR017970 : Homeobox, conserved site
IPR020479 : Homeodomain, metazoa
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036604)
CAGE tag :
H05BC09J0205,H05BC27O0813,H05BF18D0803
H05BF40B0204,H05BF88I1907
HIX0129446
pHIT000111101 ( pHIT000111101 )
Representative transcript
(Conserved hypothetical protein.)
genome : 122,888,403 - 122,889,372 (970)
query : 1 - 678 (678/678)
2 exons
InterPro :
IPR009036 : Molybdenum cofactor biosynthesis, MoeB
IPR016040 : NAD(P)-binding domain
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0129446)
CAGE tag :
T11R074C41DB
HIX0209650
eHIT000001323 ( ESTsASS_11_306 )
Representative transcript
(Non-protein coding transcript.)
genome : 122,099,067 - 122,100,966 (1,900)
query : 1 - 534 (534/534)
2 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209650)
ESTs used for assembly :
DB079110
AP000664.4
121500001-121590487 F +
NCBI
AP001977.4
121590488-121725826 F +
NCBI
AP001982.4
121725827-121821110 F +
NCBI
AP001924.5
121821111-122011470 F +
NCBI
AP001359.4
122011471-122073038 F +
NCBI
AP000755.4
122073039-122225344 F +
NCBI
AP001835.4
122225345-122330024 F +
NCBI
AP003042.2
122330025-122441888 F +
NCBI
AP002469.3
122441889-122518794 F +
NCBI
AP002762.4
122518795-122708787 F +
NCBI
AP004318.2
122708788-122815494 F +
NCBI
AP003040.2
122815495-122892797 F +
NCBI
AP000926.6
122892798-123038315 F +
NCBI
AP001970.3
123038316-123100000 F +
NCBI