bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0026218
HIT000045228
(
AK125355
)
Representative transcript
(Transcriptional enhancer factor TEF-1; NTEF-1; Protein GT-IIC; TEA domain family member 1; TEAD-1; Transcription factor 13; TCF-13;)
genome : 126,030,609 - 126,049,518 (18,910)
query : 1 - 3,740 (3,740/3,740)
3 exons
identity = 0.998
5'(0.985;0.998;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 8, cyto_nucl 7.16667, mito 6,
cyto_pero 5.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026218)
HIX0026218
HIT000631462 (
ENST00000532357
)
(Conserved hypothetical protein.)
genome : 126,030,609 - 126,045,930 (15,322)
query : 1 - 569 (569/569)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 8, cyto_nucl 7.16667, mito 6,
cyto_pero 5.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026218)
HIX0209950
HIT000626157 (
ENST00000526949
)
(TEA/ATTS family protein.)
genome : 126,049,392 - 126,049,593 (202)
query : 1 - 202 (202/202)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209950)
HIX0010250
HIT000210889 (
NM_032795
)
(RNA pseudouridylate synthase domain-containing protein 4 isoform a.)
genome : 126,071,989 - 126,081,587 (9,599)
query : 1 - 2,512 (2,512/2,527)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.4.99.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010250)
HIX0010250
HIT000561012 (
NM_001144827
)
(RNA pseudouridylate synthase domain-containing protein 4 isoform b.)
genome : 126,071,989 - 126,081,587 (9,599)
query : 1 - 2,419 (2,419/2,434)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.4.99.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010250)
HIX0010250
HIT000115048 (
ENST00000298317
)
(RNA pseudouridylate synthase domain-containing protein 4 isoform a.)
genome : 126,071,993 - 126,081,587 (9,595)
query : 1 - 2,508 (2,508/2,508)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.4.99.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010250)
HIX0010250
HIT000036536
(
BC014131
)
Representative transcript
(RNA pseudouridylate synthase domain-containing protein 4 isoform a.)
genome : 126,072,309 - 126,081,548 (9,240)
query : 1 - 2,153 (2,153/2,171)
7 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.4.99.12
InterPro :
IPR006145 : Pseudouridine synthase, RsuA/RluB/C/D/E/F
IPR006224 : Pseudouridine synthase, RluC/RluD, conserved site
IPR020103 : Pseudouridine synthase, catalytic domain
GO :
0001522 : Biological Process : pseudouridine synthesis
0003723 : Molecular Function : RNA binding
0009451 : Biological Process : RNA modification
0009982 : Molecular Function : pseudouridine synthase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010250)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK010322
Danio
sp. (Zebrafish) : BC078405
Rattus
sp. (Rat) : BC098023
Bos
sp. (Cow) : BC134590
Tetraodon
sp. (Tetraodon) : CR669174
Equus
sp. (Horse) : ENSECAT00000000458
Oryzias
sp. (Medaka) : ENSORLT00000003431
Pongo
sp. (Orangutan) : ENSPPYT00000004803
Takifugu
sp. (Fugu) : SINFRUT00000131306
Macaca
sp. (Macaque) : XM_001112402
Gallus
sp. (Chicken) : XM_001231936
Monodelphis
sp. (Opossum) : XM_001372161
Pan
sp. (Chimpanzee) : XM_508851
Canis
sp. (Dog) : XM_546413
HIX0010250
HIT000010672
(
AK027400
)
(RNA pseudouridylate synthase domain-containing protein 4 isoform a.)
genome : 126,072,309 - 126,081,541 (9,233)
query : 1 - 2,146 (2,146/2,146)
7 exons
identity = 0.998
3'(0.998;0.990;1.000;1.000;1.000;1.000;0.990)5'
coverage = 1.000
EC number :
EC 5.4.99.12
InterPro :
IPR006145 : Pseudouridine synthase, RsuA/RluB/C/D/E/F
IPR006224 : Pseudouridine synthase, RluC/RluD, conserved site
IPR020103 : Pseudouridine synthase, catalytic domain
GO :
0001522 : Biological Process : pseudouridine synthesis
0003723 : Molecular Function : RNA binding
0009451 : Biological Process : RNA modification
0009982 : Molecular Function : pseudouridine synthase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010250)
HIX0010250
HIT000426925
(
AK308059
)
(RNA pseudouridylate synthase domain-containing protein 4 isoform b.)
genome : 126,072,309 - 126,081,541 (9,233)
query : 1 - 2,052 (2,052/2,052)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;0.994;1.000)5'
coverage = 1.000
EC number :
EC 5.4.99.12
InterPro :
IPR006145 : Pseudouridine synthase, RsuA/RluB/C/D/E/F
IPR006224 : Pseudouridine synthase, RluC/RluD, conserved site
IPR020103 : Pseudouridine synthase, catalytic domain
GO :
0001522 : Biological Process : pseudouridine synthesis
0003723 : Molecular Function : RNA binding
0009451 : Biological Process : RNA modification
0009982 : Molecular Function : pseudouridine synthase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010250)
HIX0010250
HIT000632704 (
ENST00000533628
)
(RNA pseudouridylate synthase domain-containing protein 4 isoform b.)
genome : 126,072,309 - 126,081,541 (9,233)
query : 1 - 2,053 (2,053/2,053)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.4.99.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010250)
HIX0010250
HIT000626150 (
ENST00000526942
)
(RNA pseudouridylate synthase domain-containing protein 4 isoform a.)
genome : 126,072,677 - 126,081,524 (8,848)
query : 1 - 1,791 (1,791/1,791)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.4.99.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_mito 15, extr 6, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010250)
HIX0010250
HIT000495347
(
AK300723
)
(RNA pseudouridylate synthase domain-containing protein 4 isoform a.)
genome : 126,072,694 - 126,077,512 (4,819)
query : 1 - 1,281 (1,281/1,281)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.4.99.12
InterPro :
IPR006145 : Pseudouridine synthase, RsuA/RluB/C/D/E/F
IPR020103 : Pseudouridine synthase, catalytic domain
GO :
0001522 : Biological Process : pseudouridine synthesis
0003723 : Molecular Function : RNA binding
0009451 : Biological Process : RNA modification
0009982 : Molecular Function : pseudouridine synthase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, mito 9, extr 8, cyto_nucl 6.5, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010250)
HIX0010250
HIT000630042 (
ENST00000530903
)
(RNA pseudouridylate synthase domain-containing protein 4 isoform a.)
genome : 126,073,217 - 126,076,407 (3,191)
query : 1 - 1,404 (1,404/1,404)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.4.99.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21.5, mito_pero 11.5, extr 4, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010250)
HIX0010250
HIT000384450
(
AK225320
)
(RNA pseudouridylate synthase domain-containing protein 4 isoform b.)
genome : 126,073,264 - 126,081,547 (8,284)
query : 1 - 1,197 (1,197/1,197)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;0.989;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.4.99.12
InterPro :
IPR006145 : Pseudouridine synthase, RsuA/RluB/C/D/E/F
IPR006224 : Pseudouridine synthase, RluC/RluD, conserved site
IPR020103 : Pseudouridine synthase, catalytic domain
GO :
0001522 : Biological Process : pseudouridine synthesis
0003723 : Molecular Function : RNA binding
0009451 : Biological Process : RNA modification
0009982 : Molecular Function : pseudouridine synthase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010250)
HIX0010250
HIT000631770 (
ENST00000532674
)
(RNA pseudouridylate synthase domain-containing protein 4 isoform b.)
genome : 126,075,362 - 126,081,587 (6,226)
query : 1 - 579 (579/579)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.4.99.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010250)
HIX0010250
HIT000633451 (
ENST00000534393
)
(RNA pseudouridylate synthase domain-containing protein 4 isoform a.)
genome : 126,075,466 - 126,081,302 (5,837)
query : 1 - 579 (579/579)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.4.99.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010250)
HIX0010250
HIT000629188 (
ENST00000530036
)
(RNA pseudouridylate synthase domain-containing protein 4 isoform b.)
genome : 126,075,614 - 126,079,618 (4,005)
query : 1 - 566 (566/566)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.4.99.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 11, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010250)
HIX0210324
HIT000631956 (
ENST00000532866
)
(Non-protein coding transcript.)
genome : 126,078,506 - 126,078,922 (417)
query : 1 - 362 (362/362)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210324)
HIX0010250
HIT000631894 (
ENST00000532800
)
(RNA pseudouridylate synthase domain-containing protein 4 isoform b.)
genome : 126,078,935 - 126,081,525 (2,591)
query : 1 - 1,030 (1,030/1,030)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.4.99.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_mito 15, extr 6, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010250)
HIX0010250
HIT000625036 (
ENST00000525812
)
(RNA pseudouridylate synthase domain-containing protein 4 isoform b.)
genome : 126,079,446 - 126,081,192 (1,747)
query : 1 - 580 (580/580)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.4.99.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010250)
HIX0010251
HIT000632136 (
ENST00000533050
)
(Conserved hypothetical protein.)
genome : 126,081,309 - 126,132,881 (51,573)
query : 1 - 2,402 (2,402/2,402)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_mito 7, nucl 6, pero 5, plas 4.5,
extr_plas 3.5, extr 1.5, mito 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010251)
HIX0010251
HIT000209267 (
NM_024556
)
(Conserved hypothetical protein.)
genome : 126,081,619 - 126,132,879 (51,261)
query : 1 - 2,090 (2,090/2,100)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_mito 7, nucl 6, pero 5, plas 4.5,
extr_plas 3.5, extr 1.5, mito 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010251)
HIX0010251
HIT000624956 (
ENST00000525728
)
(Conserved hypothetical protein.)
genome : 126,081,661 - 126,124,272 (42,612)
query : 1 - 688 (688/688)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21.5, cyto_mito 13, nucl 4, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010251)
HIX0010251
HIT000434481
(
AK315615
)
(Protein FAM118B;)
genome : 126,081,667 - 126,131,380 (49,714)
query : 1 - 1,312 (1,312/1,325)
9 exons
identity = 0.999
5'(1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.990
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_nucl 9.33333, cyto_mito 6.83333,
nucl 6.5, plas 5.5, pero 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010251)
HIX0010251
HIT000628151 (
ENST00000528985
)
(Conserved hypothetical protein.)
genome : 126,081,667 - 126,131,380 (49,714)
query : 1 - 1,311 (1,311/1,311)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_nucl 9.33333, cyto_mito 6.83333,
nucl 6.5, pero 5, plas 4.5, extr_plas 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010251)
HIX0010251
HIT000313616 (
ENST00000360194
)
(Conserved hypothetical protein.)
genome : 126,081,668 - 126,132,526 (50,859)
query : 1 - 1,616 (1,616/1,616)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_mito 7, nucl 6, pero 5, plas 4.5,
extr_plas 3.5, extr 1.5, mito 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010251)
HIX0010251
HIT000628885 (
ENST00000529731
)
(Conserved hypothetical protein.)
genome : 126,081,668 - 126,132,163 (50,496)
query : 1 - 1,028 (1,028/1,028)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_mito 8, nucl 5, plas 4.5, pero 4,
extr_plas 3.5, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010251)
HIX0010251
HIT000629195 (
ENST00000530043
)
(Conserved hypothetical protein.)
genome : 126,081,672 - 126,120,520 (38,849)
query : 1 - 632 (632/632)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, nucl 5, pero 5, plas 4.5, extr_plas 4,
extr 2.5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010251)
HIX0010251
HIT000008030
(
AK024756
)
(Protein FAM118B;)
genome : 126,081,695 - 126,132,471 (50,777)
query : 1 - 1,606 (1,606/1,623)
9 exons
identity = 0.999
5'(0.968;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_mito 7, nucl 6, pero 5, plas 4.5,
extr_plas 3.5, extr 1.5, mito 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010251)
HIX0010251
HIT000384211
(
AK225081
)
(Protein FAM118B;)
genome : 126,081,695 - 126,132,471 (50,777)
query : 1 - 1,606 (1,606/1,623)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_mito 7, nucl 6, pero 5, plas 4.5,
extr_plas 3.5, extr 1.5, mito 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010251)
HIX0010251
HIT000030545
(
BC001647
)
Representative transcript
(Protein FAM118B;)
genome : 126,081,700 - 126,132,461 (50,762)
query : 1 - 1,591 (1,591/1,620)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_mito 7, nucl 6, pero 5, plas 4.5,
extr_plas 3.5, extr 1.5, mito 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010251)
HIX0171416
HIT000508149 (
ENST00000410135
)
(Conserved hypothetical protein.)
genome : 126,084,155 - 126,084,373 (219)
query : 1 - 219 (219/219)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171416)
HIX0010251
HIT000030328
(
BC001340
)
(Protein FAM118B;)
genome : 126,099,119 - 126,132,541 (33,423)
query : 12 - 1,657 (1,646/1,697)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_mito 7, nucl 6, pero 5, plas 4.5,
extr_plas 3.5, extr 1.5, mito 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010251)
HIX0010251
HIT000624578 (
ENST00000525338
)
(Conserved hypothetical protein.)
genome : 126,099,119 - 126,126,700 (27,582)
query : 1 - 784 (784/784)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_mito 9.66667, plas 5,
mito_pero 4.83333, pero 4, mito 3.5, nucl 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010251)
HIX0010251
HIT000626450 (
ENST00000527247
)
(Conserved hypothetical protein.)
genome : 126,099,119 - 126,111,176 (12,058)
query : 1 - 653 (653/653)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, plas 5, nucl 5, pero 4, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010251)
HIX0010251
HIT000268184
(
CR457334
)
(Conserved hypothetical protein.)
genome : 126,104,897 - 126,131,380 (26,484)
query : 1 - 1,043 (1,043/1,056)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.988
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_mito 7, nucl 6, pero 5, plas 4.5,
extr_plas 3.5, extr 1.5, mito 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010251)
HIX0036217
HIT000066795
(
AF085916
)
Representative transcript
(Conserved hypothetical protein.)
genome : 126,117,311 - 126,117,762 (452)
query : 16 - 467 (452/467)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036217)
HIX0010251
HIT000631049 (
ENST00000531935
)
(Conserved hypothetical protein.)
genome : 126,130,306 - 126,132,816 (2,511)
query : 13 - 1,888 (1,876/1,888)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010251)
HIX0010252
HIT000200000 (
NM_003139
)
(Signal recognition particle receptor subunit alpha; SR-alpha; Docking protein alpha; DP-alpha;)
genome : 126,132,814 - 126,138,877 (6,064)
query : 1 - 3,092 (3,092/3,100)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.976;1.000;1.000;1.000)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.6667, nucl 11.5,
cyto_pero 9.83333, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010252)
HIX0010252
HIT000655235 (
NM_001177842
)
(Signal recognition particle receptor subunit alpha isoform 2.)
genome : 126,132,814 - 126,138,877 (6,064)
query : 1 - 3,008 (3,008/3,016)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.976;1.000;1.000)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.6667, cyto 13.5, nucl 12.5,
cyto_pero 9.33333, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010252)
HIX0010252
HIT000030185
(
BC001162
)
(Signal recognition particle receptor subunit alpha; SR-alpha; Docking protein alpha; DP-alpha;)
genome : 126,132,829 - 126,138,757 (5,929)
query : 1 - 2,957 (2,957/2,980)
14 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.976;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000897 : Signal recognition particle, SRP54 subunit, GTPase domain
IPR003593 : AAA+ ATPase domain
IPR007222 : Signal recognition particle receptor, alpha subunit, N-terminal
IPR011012 : Longin-like domain
IPR013822 : Signal recognition particle, SRP54 subunit, helical bundle
GO :
0000166 : Molecular Function : nucleotide binding
0003924 : Molecular Function : GTPase activity
0005047 : Molecular Function : signal recognition particle binding
0005525 : Molecular Function : GTP binding
0005785 : Cellular Component : signal recognition particle receptor complex
0006184 : Biological Process : GTP catabolic process
0006614 : Biological Process : SRP-dependent cotranslational protein targeting to membrane
0006810 : Biological Process : transport
0006886 : Biological Process : intracellular protein transport
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.6667, nucl 11.5,
cyto_pero 9.83333, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010252)
HIX0010252
HIT000033634
(
BC008077
)
(Signal recognition particle receptor subunit alpha; SR-alpha; Docking protein alpha; DP-alpha;)
genome : 126,132,828 - 126,138,756 (5,929)
query : 1 - 2,957 (2,957/2,977)
14 exons
identity = 0.998
3'(0.999;0.990;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.976;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000897 : Signal recognition particle, SRP54 subunit, GTPase domain
IPR003593 : AAA+ ATPase domain
IPR007222 : Signal recognition particle receptor, alpha subunit, N-terminal
IPR011012 : Longin-like domain
IPR013822 : Signal recognition particle, SRP54 subunit, helical bundle
GO :
0000166 : Molecular Function : nucleotide binding
0003924 : Molecular Function : GTPase activity
0005047 : Molecular Function : signal recognition particle binding
0005525 : Molecular Function : GTP binding
0005785 : Cellular Component : signal recognition particle receptor complex
0006184 : Biological Process : GTP catabolic process
0006614 : Biological Process : SRP-dependent cotranslational protein targeting to membrane
0006810 : Biological Process : transport
0006886 : Biological Process : intracellular protein transport
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.1667, cyto 11.5,
cyto_pero 8.33333, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010252)
HIX0010252
HIT000127603 (
ENST00000332118
)
(Signal recognition particle receptor subunit alpha; SR-alpha; Docking protein alpha; DP-alpha;)
genome : 126,132,814 - 126,138,854 (6,041)
query : 1 - 3,069 (3,069/3,069)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.976;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.6667, nucl 11.5,
cyto_pero 9.83333, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010252)
HIX0010252
HIT000034172
(
BC009110
)
(Signal recognition particle receptor subunit alpha; SR-alpha; Docking protein alpha; DP-alpha;)
genome : 126,132,828 - 126,138,720 (5,893)
query : 1 - 2,921 (2,921/2,935)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.976;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000897 : Signal recognition particle, SRP54 subunit, GTPase domain
IPR003593 : AAA+ ATPase domain
IPR007222 : Signal recognition particle receptor, alpha subunit, N-terminal
IPR011012 : Longin-like domain
IPR013822 : Signal recognition particle, SRP54 subunit, helical bundle
GO :
0000166 : Molecular Function : nucleotide binding
0003924 : Molecular Function : GTPase activity
0005047 : Molecular Function : signal recognition particle binding
0005525 : Molecular Function : GTP binding
0005785 : Cellular Component : signal recognition particle receptor complex
0006184 : Biological Process : GTP catabolic process
0006614 : Biological Process : SRP-dependent cotranslational protein targeting to membrane
0006810 : Biological Process : transport
0006886 : Biological Process : intracellular protein transport
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.6667, nucl 11.5,
cyto_pero 9.83333, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010252)
HIX0010252
HIT000036289
(
BC013583
)
Representative transcript
(Signal recognition particle receptor subunit alpha; SR-alpha; Docking protein alpha; DP-alpha;)
genome : 126,132,835 - 126,138,783 (5,949)
query : 1 - 2,977 (2,977/2,991)
14 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.976;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000897 : Signal recognition particle, SRP54 subunit, GTPase domain
IPR003593 : AAA+ ATPase domain
IPR007222 : Signal recognition particle receptor, alpha subunit, N-terminal
IPR011012 : Longin-like domain
IPR013822 : Signal recognition particle, SRP54 subunit, helical bundle
GO :
0000166 : Molecular Function : nucleotide binding
0003924 : Molecular Function : GTPase activity
0005047 : Molecular Function : signal recognition particle binding
0005525 : Molecular Function : GTP binding
0005785 : Cellular Component : signal recognition particle receptor complex
0006184 : Biological Process : GTP catabolic process
0006614 : Biological Process : SRP-dependent cotranslational protein targeting to membrane
0006810 : Biological Process : transport
0006886 : Biological Process : intracellular protein transport
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.6667, nucl 11.5,
cyto_pero 9.83333, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010252)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ851760
Mus
sp. (Mouse) : AK004967
Rattus
sp. (Rat) : BC105782
Bos
sp. (Cow) : ENSBTAT00000018762
Oryzias
sp. (Medaka) : ENSORLT00000018398
Pongo
sp. (Orangutan) : ENSPPYT00000004805
Tetraodon
sp. (Tetraodon) : GSTENT00019549001
Takifugu
sp. (Fugu) : SINFRUT00000169874
Canis
sp. (Dog) : X03184
Macaca
sp. (Macaque) : XM_001112588
Monodelphis
sp. (Opossum) : XM_001365512
Equus
sp. (Horse) : XM_001505096
Danio
sp. (Zebrafish) : XM_692426
Pan
sp. (Chimpanzee) : XR_023972
HIX0010252
HIT000321174
(
X06272
)
(Signal recognition particle receptor subunit alpha; SR-alpha; Docking protein alpha; DP-alpha;)
genome : 126,132,830 - 126,138,716 (5,887)
query : 16 - 2,924 (2,909/2,932)
14 exons
identity = 0.990
3'(0.986;1.000;1.000;1.000;1.000;1.000;1.000;
0.978;1.000;0.988;0.976;0.994;0.988;0.978)5'
coverage = 0.992
InterPro :
IPR000897 : Signal recognition particle, SRP54 subunit, GTPase domain
IPR003593 : AAA+ ATPase domain
IPR007222 : Signal recognition particle receptor, alpha subunit, N-terminal
IPR011012 : Longin-like domain
IPR013822 : Signal recognition particle, SRP54 subunit, helical bundle
GO :
0000166 : Molecular Function : nucleotide binding
0003924 : Molecular Function : GTPase activity
0005047 : Molecular Function : signal recognition particle binding
0005525 : Molecular Function : GTP binding
0005785 : Cellular Component : signal recognition particle receptor complex
0006184 : Biological Process : GTP catabolic process
0006614 : Biological Process : SRP-dependent cotranslational protein targeting to membrane
0006810 : Biological Process : transport
0006886 : Biological Process : intracellular protein transport
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13.6667, nucl 10.5,
cyto_pero 10.3333, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010252)
HIX0010252
HIT000049653
(
AK130382
)
(Signal recognition particle receptor subunit alpha; SR-alpha; Docking protein alpha; DP-alpha;)
genome : 126,132,829 - 126,137,188 (4,360)
query : 1 - 2,492 (2,492/2,492)
11 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.989;1.000;1.000;0.967)5'
coverage = 1.000
InterPro :
IPR000897 : Signal recognition particle, SRP54 subunit, GTPase domain
IPR003593 : AAA+ ATPase domain
IPR007222 : Signal recognition particle receptor, alpha subunit, N-terminal
IPR013822 : Signal recognition particle, SRP54 subunit, helical bundle
GO :
0000166 : Molecular Function : nucleotide binding
0003924 : Molecular Function : GTPase activity
0005047 : Molecular Function : signal recognition particle binding
0005525 : Molecular Function : GTP binding
0005785 : Cellular Component : signal recognition particle receptor complex
0006184 : Biological Process : GTP catabolic process
0006614 : Biological Process : SRP-dependent cotranslational protein targeting to membrane
0006886 : Biological Process : intracellular protein transport
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 17.5, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010252)
HIX0010252
HIT000498003
(
AK303379
)
(Signal recognition particle receptor subunit alpha; SR-alpha; Docking protein alpha; DP-alpha;)
genome : 126,133,369 - 126,138,877 (5,509)
query : 1 - 2,452 (2,452/2,452)
13 exons
identity = 0.997
3'(0.995;1.000;1.000;1.000;1.000;0.989;1.000;
1.000;1.000;1.000;0.976;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000897 : Signal recognition particle, SRP54 subunit, GTPase domain
IPR003593 : AAA+ ATPase domain
IPR007222 : Signal recognition particle receptor, alpha subunit, N-terminal
IPR011012 : Longin-like domain
IPR013822 : Signal recognition particle, SRP54 subunit, helical bundle
GO :
0000166 : Molecular Function : nucleotide binding
0003924 : Molecular Function : GTPase activity
0005047 : Molecular Function : signal recognition particle binding
0005525 : Molecular Function : GTP binding
0005785 : Cellular Component : signal recognition particle receptor complex
0006184 : Biological Process : GTP catabolic process
0006614 : Biological Process : SRP-dependent cotranslational protein targeting to membrane
0006810 : Biological Process : transport
0006886 : Biological Process : intracellular protein transport
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.6667, cyto 13.5, nucl 12.5,
cyto_pero 9.33333, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010252)
HIX0010252
HIT000631367 (
ENST00000532259
)
(Signal recognition particle receptor subunit alpha isoform 2.)
genome : 126,133,369 - 126,138,877 (5,509)
query : 1 - 2,453 (2,453/2,453)
13 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.976;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.6667, cyto 13.5, nucl 12.5,
cyto_pero 9.33333, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010252)
HIX0010252
HIT000631376 (
ENST00000532268
)
(Signal recognition particle receptor subunit alpha; SR-alpha; Docking protein alpha; DP-alpha;)
genome : 126,133,736 - 126,134,650 (915)
query : 1 - 829 (829/829)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11, mito 7, nucl 6, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010252)
HIX0010252
HIT000431243
(
AK312377
)
(Signal recognition particle receptor subunit alpha; SR-alpha; Docking protein alpha; DP-alpha;)
genome : 126,133,811 - 126,138,795 (4,985)
query : 1 - 2,013 (2,013/2,013)
14 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.976;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000897 : Signal recognition particle, SRP54 subunit, GTPase domain
IPR003593 : AAA+ ATPase domain
IPR007222 : Signal recognition particle receptor, alpha subunit, N-terminal
IPR011012 : Longin-like domain
IPR013822 : Signal recognition particle, SRP54 subunit, helical bundle
GO :
0000166 : Molecular Function : nucleotide binding
0003924 : Molecular Function : GTPase activity
0005047 : Molecular Function : signal recognition particle binding
0005525 : Molecular Function : GTP binding
0005785 : Cellular Component : signal recognition particle receptor complex
0006184 : Biological Process : GTP catabolic process
0006614 : Biological Process : SRP-dependent cotranslational protein targeting to membrane
0006810 : Biological Process : transport
0006886 : Biological Process : intracellular protein transport
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.6667, nucl 11.5,
cyto_pero 9.83333, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010252)
HIX0010252
HIT000267875
(
CR457025
)
(Signal recognition particle receptor subunit alpha; SR-alpha; Docking protein alpha; DP-alpha;)
genome : 126,133,811 - 126,138,699 (4,889)
query : 1 - 1,917 (1,917/1,917)
14 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;0.989;1.000;
1.000;1.000;1.000;0.976;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000897 : Signal recognition particle, SRP54 subunit, GTPase domain
IPR003593 : AAA+ ATPase domain
IPR007222 : Signal recognition particle receptor, alpha subunit, N-terminal
IPR011012 : Longin-like domain
IPR013822 : Signal recognition particle, SRP54 subunit, helical bundle
GO :
0000166 : Molecular Function : nucleotide binding
0003924 : Molecular Function : GTPase activity
0005047 : Molecular Function : signal recognition particle binding
0005525 : Molecular Function : GTP binding
0005785 : Cellular Component : signal recognition particle receptor complex
0006184 : Biological Process : GTP catabolic process
0006614 : Biological Process : SRP-dependent cotranslational protein targeting to membrane
0006810 : Biological Process : transport
0006886 : Biological Process : intracellular protein transport
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.6667, nucl 11.5,
cyto_pero 9.83333, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010252)
HIX0010252
HIT000630240 (
ENST00000531104
)
(Signal recognition particle receptor subunit alpha; SR-alpha; Docking protein alpha; DP-alpha;)
genome : 126,134,916 - 126,135,552 (637)
query : 1 - 542 (542/542)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 19, cyto_nucl 16.5, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010252)
HIX0010252
HIT000627011 (
ENST00000527817
)
(Signal recognition particle receptor subunit alpha; SR-alpha; Docking protein alpha; DP-alpha;)
genome : 126,134,975 - 126,136,296 (1,322)
query : 1 - 687 (687/687)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 17, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010252)
HIX0010252
HIT000627916 (
ENST00000528744
)
(Signal recognition particle receptor subunit alpha isoform 2.)
genome : 126,137,069 - 126,138,815 (1,747)
query : 1 - 856 (856/856)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, mito 11, cyto_nucl 9.5, cyto_pero 9.16667,
extr 3, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010252)
HIX0010252
HIT000629824 (
ENST00000530680
)
(Signal recognition particle receptor subunit alpha; SR-alpha; Docking protein alpha; DP-alpha;)
genome : 126,137,473 - 126,139,039 (1,567)
query : 1 - 558 (558/558)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 11.5, cyto_pero 9.33333, cyto_nucl 8.5,
E.R._mito 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010252)
HIX0219237
pHIT000111147 ( pHIT000111147 )
(Conserved hypothetical protein.)
genome : 126,138,698 - 126,147,584 (8,887)
query : 1 - 1,488 (1,488/1,488)
10 exons
InterPro :
IPR006076 : FAD dependent oxidoreductase
GO :
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219237)
CAGE tag :
T11F077D2D7A
HIX0219237
HIT000628955 (
ENST00000529802
)
(FAD dependent oxidoreductase domain containing protein.)
genome : 126,139,052 - 126,141,776 (2,725)
query : 1 - 580 (580/580)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23, plas 3, nucl 2, cyto 2, cyto_nucl 2,
extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219237)
HIX0219237
HIT000625736 (
ENST00000526525
)
(Conserved hypothetical protein.)
genome : 126,139,066 - 126,143,204 (4,139)
query : 1 - 586 (586/586)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17.5, cyto_mito 11.5, extr 7, cyto 4,
cyto_nucl 4, cyto_pero 3.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219237)
HIX0219237
HIT000086182
(
BC002910
)
Representative transcript
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,142,914 - 126,148,021 (5,108)
query : 1 - 1,542 (1,542/1,562)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 0.999
InterPro :
IPR006076 : FAD dependent oxidoreductase
GO :
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 12.5, cyto 12.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219237)
HIX0219237
HIT000630389 (
ENST00000531257
)
(Conserved hypothetical protein.)
genome : 126,142,929 - 126,143,984 (1,056)
query : 1 - 800 (800/800)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 10, cyto 10, extr 7, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219237)
HIX0219237
HIT000627068 (
ENST00000527875
)
(FAD dependent oxidoreductase domain containing protein.)
genome : 126,142,984 - 126,145,038 (2,055)
query : 1 - 583 (583/583)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219237)
HIX0219237
HIT000632476 (
ENST00000533395
)
(FAD dependent oxidoreductase domain containing protein.)
genome : 126,142,986 - 126,146,114 (3,129)
query : 1 - 704 (704/704)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219237)
HIX0219237
HIT000045940
(
AK126067
)
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,143,809 - 126,148,021 (4,213)
query : 1 - 3,043 (3,043/3,043)
5 exons
identity = 0.996
5'(0.995;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR006076 : FAD dependent oxidoreductase
GO :
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 16.5, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219237)
HIX0219237
HIT000629786 (
ENST00000530642
)
(FAD dependent oxidoreductase domain containing protein.)
genome : 126,143,809 - 126,148,021 (4,213)
query : 1 - 3,045 (3,045/3,045)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 16.5, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219237)
HIX0219237
HIT000631689 (
ENST00000532590
)
(FAD dependent oxidoreductase domain containing protein.)
genome : 126,146,807 - 126,147,739 (933)
query : 1 - 674 (674/674)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 10.5, cyto_nucl 9.5, nucl 5.5,
extr_plas 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219237)
HIX0209721
HIT000581150 (
ENST00000476981
)
(Conserved hypothetical protein.)
genome : 126,148,152 - 126,148,472 (321)
query : 1 - 321 (321/321)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, extr 5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209721)
HIX0010254
HIT000567240 (
ENST00000462401
)
(Toll/interleukin-1 receptor domain-containing adapter protein; TIR domain-containing adapter protein; Adaptor protein Wyatt; MyD88 adapter-like protein; MyD88-2;)
genome : 126,152,960 - 126,161,464 (8,505)
query : 1 - 545 (545/545)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, extr 4, golg 2, extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010254)
HIX0010254
HIT000592238 (
ENST00000488598
)
(Toll/interleukin-1 receptor domain-containing adapter protein; TIR domain-containing adapter protein; Adaptor protein Wyatt; MyD88 adapter-like protein; MyD88-2;)
genome : 126,152,968 - 126,162,582 (9,615)
query : 1 - 889 (889/889)
6 exons
identity = 0.993
5'(1.000;0.988;0.968;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 12, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010254)
HIX0010254
HIT000044171
(
AK124298
)
(Toll/interleukin-1 receptor domain-containing adapter protein; TIR domain-containing adapter protein; Adaptor protein Wyatt; MyD88 adapter-like protein; MyD88-2;)
genome : 126,152,982 - 126,164,828 (11,847)
query : 1 - 2,195 (2,195/2,195)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;0.998;0.997)3'
coverage = 1.000
InterPro :
IPR000157 : Toll/interleukin-1 receptor homology (TIR) domain
IPR017279 : Toll-interleukin 1 receptor domain-containing adaptor protein, Tirap
GO :
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010254)
HIX0010254
HIT000366488 (
NM_001039661
)
(Toll/interleukin-1 receptor domain-containing adapter protein; TIR domain-containing adapter protein; Adaptor protein Wyatt; MyD88 adapter-like protein; MyD88-2;)
genome : 126,152,982 - 126,164,828 (11,847)
query : 1 - 2,348 (2,348/2,348)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15, cyto 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010254)
HIX0010254
HIT000476156 (
ENST00000392679
)
(Toll/interleukin-1 receptor domain-containing adapter protein; TIR domain-containing adapter protein; Adaptor protein Wyatt; MyD88 adapter-like protein; MyD88-2;)
genome : 126,152,982 - 126,164,828 (11,847)
query : 1 - 2,195 (2,195/2,195)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010254)
HIX0010254
HIT000213472 (
NM_148910
)
(Toll/interleukin-1 receptor domain-containing adapter protein; TIR domain-containing adapter protein; Adaptor protein Wyatt; MyD88 adapter-like protein; MyD88-2;)
genome : 126,152,982 - 126,163,071 (10,090)
query : 1 - 1,219 (1,219/1,219)
5 exons
identity = 0.995
5'(1.000;0.988;0.968;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15, cyto 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010254)
HIX0010254
HIT000432013
(
AK313147
)
(Toll/interleukin-1 receptor domain-containing adapter protein; TIR domain-containing adapter protein; Adaptor protein Wyatt; MyD88 adapter-like protein; MyD88-2;)
genome : 126,152,989 - 126,163,012 (10,024)
query : 1 - 984 (984/984)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000157 : Toll/interleukin-1 receptor homology (TIR) domain
IPR017279 : Toll-interleukin 1 receptor domain-containing adaptor protein, Tirap
GO :
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010254)
HIX0010254
HIT000571629 (
ENST00000467006
)
(Hypothetical short protein.)
genome : 126,153,001 - 126,160,792 (7,792)
query : 1 - 567 (567/567)
5 exons
identity = 0.989
5'(1.000;1.000;0.988;0.968;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 3.5, cyto_nucl 3.5, nucl 2.5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010254)
HIX0010254
HIT000078594
(
AF378129
)
(Toll/interleukin-1 receptor domain-containing adapter protein; TIR domain-containing adapter protein; Adaptor protein Wyatt; MyD88 adapter-like protein; MyD88-2;)
genome : 126,153,005 - 126,163,071 (10,067)
query : 4 - 1,200 (1,197/1,200)
5 exons
identity = 0.994
5'(0.978;0.988;0.968;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR000157 : Toll/interleukin-1 receptor homology (TIR) domain
IPR017279 : Toll-interleukin 1 receptor domain-containing adaptor protein, Tirap
GO :
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010254)
HIX0010254
HIT000079214
(
AF410783
)
Representative transcript
(Toll/interleukin-1 receptor domain-containing adapter protein; TIR domain-containing adapter protein; Adaptor protein Wyatt; MyD88 adapter-like protein; MyD88-2;)
genome : 126,153,005 - 126,167,473 (14,469)
query : 1 - 2,174 (2,174/2,192)
8 exons
identity = 0.990
5'(1.000;0.988;0.968;1.000;0.998;0.938;0.991;
0.994)3'
coverage = 1.000
InterPro :
IPR000157 : Toll/interleukin-1 receptor homology (TIR) domain
IPR017279 : Toll-interleukin 1 receptor domain-containing adaptor protein, Tirap
GO :
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010254)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : AB446481
Mus
sp. (Mouse) : AK151117
Gallus
sp. (Chicken) : BX933959
Bos
sp. (Cow) : DQ319072
Equus
sp. (Horse) : ENSECAT00000012827
Rattus
sp. (Rat) : ENSRNOT00000038317
Takifugu
sp. (Fugu) : SINFRUT00000147061
Macaca
sp. (Macaque) : XM_001112950
Pan
sp. (Chimpanzee) : XM_001150608
Monodelphis
sp. (Opossum) : XM_001372279
Canis
sp. (Dog) : XM_846817
HIX0010254
HIT000476155 (
ENST00000392678
)
(Toll/interleukin-1 receptor domain-containing adapter protein; TIR domain-containing adapter protein; Adaptor protein Wyatt; MyD88 adapter-like protein; MyD88-2;)
genome : 126,153,005 - 126,163,139 (10,135)
query : 1 - 1,264 (1,264/1,264)
5 exons
identity = 0.995
5'(1.000;0.988;0.968;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010254)
HIX0010254
HIT000041557
(
BC032474
)
(Toll/interleukin-1 receptor domain-containing adapter protein; TIR domain-containing adapter protein; Adaptor protein Wyatt; MyD88 adapter-like protein; MyD88-2;)
genome : 126,153,013 - 126,164,578 (11,566)
query : 1 - 2,067 (2,067/2,151)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR000157 : Toll/interleukin-1 receptor homology (TIR) domain
IPR017279 : Toll-interleukin 1 receptor domain-containing adaptor protein, Tirap
GO :
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010254)
HIX0010254
HIT000476157 (
ENST00000392680
)
(Toll/interleukin-1 receptor domain-containing adapter protein; TIR domain-containing adapter protein; Adaptor protein Wyatt; MyD88 adapter-like protein; MyD88-2;)
genome : 126,153,013 - 126,164,579 (11,567)
query : 1 - 2,068 (2,068/2,068)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010254)
HIX0010254
HIT000331960
(
AY576786
)
(Toll/interleukin-1 receptor domain-containing adapter protein; TIR domain-containing adapter protein; Adaptor protein Wyatt; MyD88 adapter-like protein; MyD88-2;)
genome : 126,160,751 - 126,168,740 (7,990)
query : 1 - 2,245 (2,245/2,245)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000157 : Toll/interleukin-1 receptor homology (TIR) domain
IPR017279 : Toll-interleukin 1 receptor domain-containing adaptor protein, Tirap
GO :
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010254)
HIX0010254
HIT000583816 (
ENST00000479770
)
(Toll/interleukin-1 receptor domain-containing adapter protein; TIR domain-containing adapter protein; Adaptor protein Wyatt; MyD88 adapter-like protein; MyD88-2;)
genome : 126,160,751 - 126,168,740 (7,990)
query : 1 - 2,245 (2,245/2,245)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010254)
HIX0010254
HIT000331959
(
AY576785
)
(Toll/interleukin-1 receptor domain-containing adapter protein; TIR domain-containing adapter protein; Adaptor protein Wyatt; MyD88 adapter-like protein; MyD88-2;)
genome : 126,160,751 - 126,164,579 (3,829)
query : 1 - 1,702 (1,702/1,702)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000157 : Toll/interleukin-1 receptor homology (TIR) domain
IPR017279 : Toll-interleukin 1 receptor domain-containing adaptor protein, Tirap
GO :
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010254)
HIX0010254
HIT000331961
(
AY576787
)
(Toll/interleukin-1 receptor domain-containing adapter protein; TIR domain-containing adapter protein; Adaptor protein Wyatt; MyD88 adapter-like protein; MyD88-2;)
genome : 126,160,751 - 126,163,139 (2,389)
query : 1 - 874 (874/874)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000157 : Toll/interleukin-1 receptor homology (TIR) domain
IPR017279 : Toll-interleukin 1 receptor domain-containing adaptor protein, Tirap
GO :
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010254)
HIX0010254
HIT000079161
(
AF406652
)
(Toll/interleukin-1 receptor domain-containing adapter protein isoform b.)
genome : 126,160,790 - 126,163,012 (2,223)
query : 1 - 708 (708/708)
2 exons
identity = 0.999
5'(1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000157 : Toll/interleukin-1 receptor homology (TIR) domain
IPR017279 : Toll-interleukin 1 receptor domain-containing adaptor protein, Tirap
GO :
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010254)
HIX0010254
HIT000487382
(
AB446477
)
(Toll/interleukin-1 receptor domain-containing adapter protein; TIR domain-containing adapter protein; Adaptor protein Wyatt; MyD88 adapter-like protein; MyD88-2;)
genome : 126,160,790 - 126,162,950 (2,161)
query : 1 - 646 (646/666)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.970
InterPro :
IPR000157 : Toll/interleukin-1 receptor homology (TIR) domain
IPR017279 : Toll-interleukin 1 receptor domain-containing adaptor protein, Tirap
GO :
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010254)
HIX0210360
HIT000632460 (
ENST00000533378
)
(Conserved hypothetical protein.)
genome : 126,162,817 - 126,164,149 (1,333)
query : 1 - 492 (492/492)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 10, cyto_nucl 9.33333,
cyto_plas 7.33333, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210360)
HIX0209517
HIT000563965
(
AB593164
)
Representative transcript
(M7GpppX diphosphatase.)
genome : 126,164,192 - 126,174,216 (10,025)
query : 1 - 494 (494/494)
2 exons
identity = 0.998
3'(0.997;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 9.5, cyto_nucl 7.33333,
cyto_pero 5.66667, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209517)
HIX0209517
HIT000624210 (
ENST00000524964
)
(Conserved hypothetical protein.)
genome : 126,164,193 - 126,174,213 (10,021)
query : 1 - 416 (416/416)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 15, cyto 9, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209517)
HIX0209517
HIT000628044 (
ENST00000528876
)
(Conserved hypothetical protein.)
genome : 126,164,202 - 126,167,021 (2,820)
query : 1 - 509 (509/509)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, extr 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209517)
HIX0010254
HIT000019264
(
AK094409
)
(Conserved hypothetical protein.)
genome : 126,166,548 - 126,168,047 (1,500)
query : 1 - 1,495 (1,495/1,522)
1 exon
identity = 0.989
5'(0.989)3'
coverage = 0.982
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, pero 4, plas 3.5, extr_plas 3, extr 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010254)
HIX0010255
HIT000204476 (
NM_014026
)
(m7GpppX diphosphatase; EC=3.6.1.59; DCS-1; Decapping scavenger enzyme; Hint-related 7meGMP-directed hydrolase; Histidine triad nucleotide-binding protein 5; Histidine triad protein member 5; HINT-5; Scavenger mRNA-decapping enzyme DcpS;)
genome : 126,173,647 - 126,215,644 (41,998)
query : 1 - 1,479 (1,479/1,508)
6 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 15, nucl 14
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010255)
HIX0010255
HIT000081314
(
AF532613
)
Representative transcript
(m7GpppX diphosphatase; EC=3.6.1.59; DCS-1; Decapping scavenger enzyme; Hint-related 7meGMP-directed hydrolase; Histidine triad nucleotide-binding protein 5; Histidine triad protein member 5; HINT-5; Scavenger mRNA-decapping enzyme DcpS;)
genome : 126,173,647 - 126,215,644 (41,998)
query : 1 - 1,479 (1,479/1,479)
6 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008594 : Scavenger mRNA decapping enzyme DcpS/DCS2
IPR011145 : Scavenger mRNA decapping enzyme, N-terminal
IPR011146 : HIT-like domain
IPR019808 : Histidine triad, conserved site
GO :
0000290 : Biological Process : deadenylation-dependent decapping of nuclear-transcribed mRNA
0003824 : Molecular Function : catalytic activity
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 15, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010255)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : AF510720
Mus
sp. (Mouse) : AK171018
Takifugu
sp. (Fugu) : AY116078
Rattus
sp. (Rat) : BC105900
Gallus
sp. (Chicken) : ENSGALT00000001619
Oryzias
sp. (Medaka) : ENSORLT00000011517
Oryzias
sp. (Medaka) : ENSORLT00000016295
Pongo
sp. (Orangutan) : ENSPPYT00000004809
Macaca
sp. (Macaque) : XM_001109581
Monodelphis
sp. (Opossum) : XM_001372330
Equus
sp. (Horse) : XM_001505098
Canis
sp. (Dog) : XM_846807
Pan
sp. (Chimpanzee) : XR_024070
HIX0010255
HIT000108950 (
ENST00000263579
)
(m7GpppX diphosphatase; EC=3.6.1.59; DCS-1; Decapping scavenger enzyme; Hint-related 7meGMP-directed hydrolase; Histidine triad nucleotide-binding protein 5; Histidine triad protein member 5; HINT-5; Scavenger mRNA-decapping enzyme DcpS;)
genome : 126,173,647 - 126,215,644 (41,998)
query : 1 - 1,479 (1,479/1,479)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 15, nucl 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010255)
HIX0010255
HIT000083628
(
AY040771
)
(m7GpppX diphosphatase; EC=3.6.1.59; DCS-1; Decapping scavenger enzyme; Hint-related 7meGMP-directed hydrolase; Histidine triad nucleotide-binding protein 5; Histidine triad protein member 5; HINT-5; Scavenger mRNA-decapping enzyme DcpS;)
genome : 126,173,950 - 126,215,648 (41,699)
query : 2 - 1,181 (1,180/1,200)
6 exons
identity = 0.998
5'(0.996;0.994;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR008594 : Scavenger mRNA decapping enzyme DcpS/DCS2
IPR011145 : Scavenger mRNA decapping enzyme, N-terminal
IPR011146 : HIT-like domain
IPR019808 : Histidine triad, conserved site
GO :
0000290 : Biological Process : deadenylation-dependent decapping of nuclear-transcribed mRNA
0003824 : Molecular Function : catalytic activity
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 15, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010255)
HIX0010255
HIT000009828
(
AK026554
)
(m7GpppX diphosphatase; EC=3.6.1.59; DCS-1; Decapping scavenger enzyme; Hint-related 7meGMP-directed hydrolase; Histidine triad nucleotide-binding protein 5; Histidine triad protein member 5; HINT-5; Scavenger mRNA-decapping enzyme DcpS;)
genome : 126,173,951 - 126,215,644 (41,694)
query : 1 - 1,175 (1,175/1,193)
6 exons
identity = 0.997
5'(0.996;0.994;1.000;1.000;0.991;0.998)3'
coverage = 1.000
InterPro :
IPR008594 : Scavenger mRNA decapping enzyme DcpS/DCS2
IPR011145 : Scavenger mRNA decapping enzyme, N-terminal
IPR011146 : HIT-like domain
IPR019808 : Histidine triad, conserved site
GO :
0000290 : Biological Process : deadenylation-dependent decapping of nuclear-transcribed mRNA
0003824 : Molecular Function : catalytic activity
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010255)
HIX0010255
HIT000330869
(
AK223089
)
(m7GpppX diphosphatase; EC=3.6.1.59; DCS-1; Decapping scavenger enzyme; Hint-related 7meGMP-directed hydrolase; Histidine triad nucleotide-binding protein 5; Histidine triad protein member 5; HINT-5; Scavenger mRNA-decapping enzyme DcpS;)
genome : 126,173,951 - 126,215,644 (41,694)
query : 1 - 1,175 (1,175/1,193)
6 exons
identity = 0.997
5'(0.996;0.994;1.000;1.000;0.991;0.998)3'
coverage = 1.000
InterPro :
IPR008594 : Scavenger mRNA decapping enzyme DcpS/DCS2
IPR011145 : Scavenger mRNA decapping enzyme, N-terminal
IPR011146 : HIT-like domain
IPR019808 : Histidine triad, conserved site
GO :
0000290 : Biological Process : deadenylation-dependent decapping of nuclear-transcribed mRNA
0003824 : Molecular Function : catalytic activity
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010255)
HIX0010255
HIT000036761
(
BC014532
)
(m7GpppX diphosphatase; EC=3.6.1.59; DCS-1; Decapping scavenger enzyme; Hint-related 7meGMP-directed hydrolase; Histidine triad nucleotide-binding protein 5; Histidine triad protein member 5; HINT-5; Scavenger mRNA-decapping enzyme DcpS;)
genome : 126,173,960 - 126,215,644 (41,685)
query : 7 - 1,172 (1,166/1,201)
6 exons
identity = 0.996
5'(0.995;0.989;0.993;1.000;1.000;0.998)3'
coverage = 0.995
InterPro :
IPR008594 : Scavenger mRNA decapping enzyme DcpS/DCS2
IPR011145 : Scavenger mRNA decapping enzyme, N-terminal
IPR011146 : HIT-like domain
IPR019808 : Histidine triad, conserved site
GO :
0000290 : Biological Process : deadenylation-dependent decapping of nuclear-transcribed mRNA
0003824 : Molecular Function : catalytic activity
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 15, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010255)
HIX0010255
HIT000426269
(
AK307403
)
(m7GpppX diphosphatase; EC=3.6.1.59; DCS-1; Decapping scavenger enzyme; Hint-related 7meGMP-directed hydrolase; Histidine triad nucleotide-binding protein 5; Histidine triad protein member 5; HINT-5; Scavenger mRNA-decapping enzyme DcpS;)
genome : 126,173,956 - 126,215,507 (41,552)
query : 2 - 1,034 (1,033/1,034)
6 exons
identity = 0.998
5'(1.000;0.994;0.993;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR008594 : Scavenger mRNA decapping enzyme DcpS/DCS2
IPR011145 : Scavenger mRNA decapping enzyme, N-terminal
IPR011146 : HIT-like domain
IPR019808 : Histidine triad, conserved site
GO :
0000290 : Biological Process : deadenylation-dependent decapping of nuclear-transcribed mRNA
0003824 : Molecular Function : catalytic activity
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 15, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010255)
HIX0010255
HIT000001804
(
AF077201
)
(m7GpppX diphosphatase; EC=3.6.1.59; DCS-1; Decapping scavenger enzyme; Hint-related 7meGMP-directed hydrolase; Histidine triad nucleotide-binding protein 5; Histidine triad protein member 5; HINT-5; Scavenger mRNA-decapping enzyme DcpS;)
genome : 126,173,967 - 126,215,644 (41,678)
query : 4 - 1,162 (1,159/1,163)
6 exons
identity = 0.998
5'(0.995;0.994;1.000;1.000;1.000;1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 15, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010255)
HIX0010255
HIT000250688
(
AY077684
)
(m7GpppX diphosphatase; EC=3.6.1.59; DCS-1; Decapping scavenger enzyme; Hint-related 7meGMP-directed hydrolase; Histidine triad nucleotide-binding protein 5; Histidine triad protein member 5; HINT-5; Scavenger mRNA-decapping enzyme DcpS;)
genome : 126,173,976 - 126,215,508 (41,533)
query : 1 - 1,014 (1,014/1,014)
6 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008594 : Scavenger mRNA decapping enzyme DcpS/DCS2
IPR011145 : Scavenger mRNA decapping enzyme, N-terminal
IPR011146 : HIT-like domain
IPR019808 : Histidine triad, conserved site
GO :
0000290 : Biological Process : deadenylation-dependent decapping of nuclear-transcribed mRNA
0003824 : Molecular Function : catalytic activity
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 15, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010255)
HIX0171401
HIT000499327
(
AK304703
)
Representative transcript
(Conserved hypothetical protein.)
genome : 126,197,766 - 126,199,422 (1,657)
query : 1 - 1,043 (1,043/1,043)
2 exons
identity = 0.997
5'(0.997;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171401)
HIX0010255
HIT000630001 (
ENST00000530860
)
(M7GpppX diphosphatase.)
genome : 126,201,299 - 126,215,644 (14,346)
query : 1 - 661 (661/661)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15.5, extr 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010255)
HIX0010255
HIT000015695
(
AK090828
)
(M7GpppX diphosphatase.)
genome : 126,206,309 - 126,215,611 (9,303)
query : 1 - 2,467 (2,467/2,467)
3 exons
identity = 0.999
5'(0.999;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR008594 : Scavenger mRNA decapping enzyme DcpS/DCS2
IPR011146 : HIT-like domain
IPR019808 : Histidine triad, conserved site
GO :
0000290 : Biological Process : deadenylation-dependent decapping of nuclear-transcribed mRNA
0003824 : Molecular Function : catalytic activity
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, cyto 12, nucl 10, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010255)
HIX0010255
HIT000628314 (
ENST00000529149
)
(M7GpppX diphosphatase.)
genome : 126,206,309 - 126,215,611 (9,303)
query : 1 - 2,467 (2,467/2,467)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, cyto 12, nucl 10, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010255)
HIX0018600
HIT000658997 (
NR_033839
)
(Hypothetical short protein.)
genome : 126,211,611 - 126,225,482 (13,872)
query : 1 - 753 (753/753)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, mito 6, cyto 3, E.R._mito 3, mito_pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018600)
HIX0036274
HIT000245023
(
AJ227874
)
Representative transcript
(Conserved hypothetical protein.)
genome : 126,219,413 - 126,219,895 (483)
query : 1 - 486 (486/486)
1 exon
identity = 0.984
5'(0.984)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036274)
HIX0018600
HIT000021225
(
AK096370
)
Representative transcript
(Conserved hypothetical protein.)
genome : 126,220,067 - 126,225,482 (5,416)
query : 1 - 2,293 (2,293/2,293)
3 exons
identity = 0.997
3'(0.999;0.989;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 13, cyto_nucl 7.83333,
cyto_pero 7.83333, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018600)
HIX0010256
pHIT000084815 ( pHIT000084815 )
(Hypothetical short protein.)
genome : 126,224,965 - 126,233,674 (8,710)
query : 1 - 189 (189/189)
4 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
CAGE tag :
H39BB62C1509
HIX0010256
HIT000633779 (
ENST00000534733
)
(Conserved hypothetical protein.)
genome : 126,225,535 - 126,276,921 (51,387)
query : 1 - 545 (545/545)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000723442 (
NM_001254757
)
(Glycosyl transferase, family 29 protein.)
genome : 126,225,540 - 126,284,536 (58,997)
query : 1 - 1,854 (1,854/1,854)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.4
KEGG pathway :
00512 : Mucin type O-Glycan biosynthesis (7)
00533 : Glycosaminoglycan biosynthesis - keratan sulfate (6)
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9, extr 9, extr_plas 9, E.R. 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000630350 (
ENST00000531217
)
(Glycosyl transferase, family 29 protein.)
genome : 126,225,555 - 126,284,503 (58,949)
query : 1 - 1,745 (1,745/1,745)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, pero 5, plas 4, nucl 4, extr 3, E.R._mito 3,
mito 2.5, E.R. 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000104032 (
ENST00000227495
)
(Glycosyl transferase, family 29 protein.)
genome : 126,225,555 - 126,284,499 (58,945)
query : 1 - 1,790 (1,790/1,790)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9, extr 9, extr_plas 9, E.R. 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000542262 (
ENST00000444328
)
(Glycosyl transferase, family 29 protein.)
genome : 126,225,579 - 126,284,533 (58,955)
query : 1 - 1,812 (1,812/1,812)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9, extr 9, extr_plas 9, E.R. 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000310177 (
ENST00000356132
)
(Glycosyl transferase, family 29 protein.)
genome : 126,225,587 - 126,284,513 (58,927)
query : 1 - 1,802 (1,802/1,802)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9.5, extr_plas 9.5, extr 8.5, E.R. 7, golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000202884 (
NM_006278
)
(Glycosyl transferase, family 29 protein.)
genome : 126,225,789 - 126,284,536 (58,748)
query : 1 - 2,053 (2,053/2,053)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.4
KEGG pathway :
00512 : Mucin type O-Glycan biosynthesis (7)
00533 : Glycosaminoglycan biosynthesis - keratan sulfate (6)
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9, extr 9, extr_plas 9, E.R. 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000629737 (
ENST00000530591
)
(Glycosyl transferase, family 29 protein.)
genome : 126,225,789 - 126,283,942 (58,154)
query : 1 - 1,459 (1,459/1,459)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9, extr 9, extr_plas 9, E.R. 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000633147 (
ENST00000534083
)
(Glycosyl transferase, family 29 protein.)
genome : 126,225,869 - 126,284,470 (58,602)
query : 1 - 1,919 (1,919/1,919)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9, extr 9, extr_plas 9, E.R. 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000323457
(
X74570
)
(CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4; Alpha 2,3-ST 4; Beta-galactoside alpha-2,3-sialyltransferase 4; EC=2.4.99.-; Alpha 2,3-sialyltransferase IV; Gal-NAc6S; Gal-beta-1,4-GalNAc-alpha-2,3-sialyltransferase; SAT-3; ST-4; ST3Gal IV; ST3GalIV; ST3GalA.2; STZ; Sialyltransferase 4C; SIAT4-C;)
genome : 126,226,096 - 126,284,532 (58,437)
query : 1 - 1,742 (1,742/1,766)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.4.99.-
InterPro :
IPR001675 : Glycosyl transferase, family 29
GO :
0006486 : Biological Process : protein glycosylation
0008373 : Molecular Function : sialyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9, extr 9, extr_plas 9, E.R. 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
pHIT000083711 ( pHIT000083711 )
(Conserved hypothetical protein.)
genome : 126,227,063 - 126,256,979 (29,917)
query : 1 - 279 (279/279)
4 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
CAGE tag :
H22BA45L1002
HIX0010256
HIT000627781 (
ENST00000528605
)
(Glycosyl transferase, family 29 protein.)
genome : 126,244,915 - 126,278,699 (33,785)
query : 1 - 1,100 (1,100/1,100)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000625525 (
ENST00000526311
)
(Conserved hypothetical protein.)
genome : 126,262,070 - 126,277,522 (15,453)
query : 1 - 574 (574/574)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, plas 7, extr_plas 5.5, nucl 4, extr 2,
pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000628027 (
ENST00000528858
)
(Glycosyl transferase, family 29 protein.)
genome : 126,263,123 - 126,278,391 (15,269)
query : 1 - 763 (763/763)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000633510 (
ENST00000534452
)
(Conserved hypothetical protein.)
genome : 126,273,113 - 126,277,244 (4,132)
query : 1 - 550 (550/550)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000035029
(
BC010645
)
Representative transcript
(CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4; Alpha 2,3-ST 4; Beta-galactoside alpha-2,3-sialyltransferase 4; EC=2.4.99.-; Alpha 2,3-sialyltransferase IV; Gal-NAc6S; Gal-beta-1,4-GalNAc-alpha-2,3-sialyltransferase; SAT-3; ST-4; ST3Gal IV; ST3GalIV; ST3GalA.2; STZ; Sialyltransferase 4C; SIAT4-C;)
genome : 126,273,311 - 126,284,532 (11,222)
query : 1 - 1,723 (1,723/1,764)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
InterPro :
IPR001675 : Glycosyl transferase, family 29
GO :
0006486 : Biological Process : protein glycosylation
0008373 : Molecular Function : sialyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9, extr 9, extr_plas 9, E.R. 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000723443 (
NM_001254758
)
(Glycosyl transferase, family 29 protein.)
genome : 126,273,311 - 126,284,536 (11,226)
query : 1 - 1,727 (1,727/1,727)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.4
KEGG pathway :
00512 : Mucin type O-Glycan biosynthesis (7)
00533 : Glycosaminoglycan biosynthesis - keratan sulfate (6)
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9, extr 9, extr_plas 9, E.R. 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000476146 (
ENST00000392669
)
(Glycosyl transferase, family 29 protein.)
genome : 126,273,311 - 126,284,533 (11,223)
query : 1 - 1,724 (1,724/1,724)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9, extr 9, extr_plas 9, E.R. 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000625964 (
ENST00000526756
)
(Glycosyl transferase, family 29 protein.)
genome : 126,275,482 - 126,278,393 (2,912)
query : 1 - 802 (802/802)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000625935 (
ENST00000526727
)
(Glycosyl transferase, family 29 protein.)
genome : 126,275,677 - 126,284,533 (8,857)
query : 1 - 1,967 (1,967/1,967)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9, extr 9, extr_plas 9, E.R. 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000424374
(
AK291577
)
(CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase 4 isoform 3 precursor.)
genome : 126,275,982 - 126,284,335 (8,354)
query : 1 - 1,482 (1,482/1,482)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 2.4.99.4
KEGG pathway :
00512 : Mucin type O-Glycan biosynthesis (7)
00533 : Glycosaminoglycan biosynthesis - keratan sulfate (6)
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
InterPro :
IPR001675 : Glycosyl transferase, family 29
GO :
0006486 : Biological Process : protein glycosylation
0008373 : Molecular Function : sialyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9.5, extr_plas 9.5, extr 8.5, E.R. 7, golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000433604
(
AK314738
)
(CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4; Alpha 2,3-ST 4; Beta-galactoside alpha-2,3-sialyltransferase 4; EC=2.4.99.-; Alpha 2,3-sialyltransferase IV; Gal-NAc6S; Gal-beta-1,4-GalNAc-alpha-2,3-sialyltransferase; SAT-3; ST-4; ST3Gal IV; ST3GalIV; ST3GalA.2; STZ; Sialyltransferase 4C; SIAT4-C;)
genome : 126,275,982 - 126,283,942 (7,961)
query : 1 - 1,059 (1,059/1,059)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.995;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
InterPro :
IPR001675 : Glycosyl transferase, family 29
GO :
0006486 : Biological Process : protein glycosylation
0008373 : Molecular Function : sialyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9, extr 9, extr_plas 9, E.R. 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000723444 (
NM_001254759
)
(Glycosyl transferase, family 29 protein.)
genome : 126,276,077 - 126,284,536 (8,460)
query : 1 - 1,871 (1,871/1,871)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.4
KEGG pathway :
00512 : Mucin type O-Glycan biosynthesis (7)
00533 : Glycosaminoglycan biosynthesis - keratan sulfate (6)
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, E.R. 7, plas 5, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000547340 (
ENST00000449406
)
(Glycosyl transferase, family 29 protein.)
genome : 126,276,082 - 126,284,501 (8,420)
query : 1 - 1,669 (1,669/1,669)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, E.R. 8, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000631351 (
ENST00000532243
)
(Glycosyl transferase, family 29 protein.)
genome : 126,276,090 - 126,284,503 (8,414)
query : 1 - 1,825 (1,825/1,825)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, E.R. 7, plas 5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000083630
(
AY040826
)
(Glycosyl transferase, family 29 protein.)
genome : 126,276,368 - 126,283,942 (7,575)
query : 17 - 1,020 (1,004/1,020)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.984
EC number :
EC 2.4.99.4
KEGG pathway :
00512 : Mucin type O-Glycan biosynthesis (7)
00533 : Glycosaminoglycan biosynthesis - keratan sulfate (6)
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
InterPro :
IPR001675 : Glycosyl transferase, family 29
GO :
0006486 : Biological Process : protein glycosylation
0008373 : Molecular Function : sialyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9.5, extr_plas 9.5, extr 8.5, E.R. 7, golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000267708
(
CR456858
)
(Glycosyl transferase, family 29 protein.)
genome : 126,276,368 - 126,283,938 (7,571)
query : 17 - 986 (970/990)
9 exons
identity = 0.998
5'(1.000;1.000;0.990;1.000;0.990;1.000;1.000;
1.000;1.000)3'
coverage = 0.980
InterPro :
IPR001675 : Glycosyl transferase, family 29
GO :
0006486 : Biological Process : protein glycosylation
0008373 : Molecular Function : sialyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9, extr 9, extr_plas 9, E.R. 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000081118
(
AF516604
)
(CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase 4 isoform 1 precursor.)
genome : 126,276,355 - 126,283,942 (7,588)
query : 1 - 987 (987/987)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.4
KEGG pathway :
00512 : Mucin type O-Glycan biosynthesis (7)
00533 : Glycosaminoglycan biosynthesis - keratan sulfate (6)
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
InterPro :
IPR001675 : Glycosyl transferase, family 29
GO :
0006486 : Biological Process : protein glycosylation
0008373 : Molecular Function : sialyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, plas 8, E.R. 7, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000081228
(
AF525084
)
(CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase 4 isoform 2.)
genome : 126,276,355 - 126,283,942 (7,588)
query : 1 - 1,017 (1,017/1,017)
9 exons
identity = 0.998
5'(1.000;1.000;0.991;1.000;0.990;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.4
KEGG pathway :
00512 : Mucin type O-Glycan biosynthesis (7)
00533 : Glycosaminoglycan biosynthesis - keratan sulfate (6)
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
InterPro :
IPR001675 : Glycosyl transferase, family 29
GO :
0006486 : Biological Process : protein glycosylation
0008373 : Molecular Function : sialyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, plas 9, E.R. 8, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000192566
(
L23767
)
(CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase 4 isoform 3 precursor.)
genome : 126,276,355 - 126,283,942 (7,588)
query : 1 - 999 (999/999)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.4
KEGG pathway :
00512 : Mucin type O-Glycan biosynthesis (7)
00533 : Glycosaminoglycan biosynthesis - keratan sulfate (6)
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
InterPro :
IPR001675 : Glycosyl transferase, family 29
GO :
0006486 : Biological Process : protein glycosylation
0008373 : Molecular Function : sialyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, E.R. 7, plas 5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000633515 (
ENST00000534457
)
(Glycosyl transferase, family 29 protein.)
genome : 126,276,355 - 126,283,942 (7,588)
query : 1 - 987 (987/987)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.4
KEGG pathway :
00512 : Mucin type O-Glycan biosynthesis (7)
00533 : Glycosaminoglycan biosynthesis - keratan sulfate (6)
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, plas 8, E.R. 7, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000081116
(
AF516602
)
(Glycosyl transferase, family 29 protein.)
genome : 126,276,385 - 126,283,942 (7,558)
query : 1 - 987 (987/987)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.4
KEGG pathway :
00512 : Mucin type O-Glycan biosynthesis (7)
00533 : Glycosaminoglycan biosynthesis - keratan sulfate (6)
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
InterPro :
IPR001675 : Glycosyl transferase, family 29
GO :
0006486 : Biological Process : protein glycosylation
0008373 : Molecular Function : sialyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, E.R. 8, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000081117
(
AF516603
)
(Glycosyl transferase, family 29 protein.)
genome : 126,276,385 - 126,283,942 (7,558)
query : 1 - 957 (957/957)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.4
KEGG pathway :
00512 : Mucin type O-Glycan biosynthesis (7)
00533 : Glycosaminoglycan biosynthesis - keratan sulfate (6)
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
InterPro :
IPR001675 : Glycosyl transferase, family 29
GO :
0006486 : Biological Process : protein glycosylation
0008373 : Molecular Function : sialyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, E.R. 8, pero 3, plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000005203
(
AK021929
)
(Glycosyl transferase, family 29 protein.)
genome : 126,276,393 - 126,310,752 (34,360)
query : 1 - 1,306 (1,306/1,306)
7 exons
identity = 0.996
5'(1.000;0.988;0.990;1.000;1.000;0.993;0.997)3'
coverage = 1.000
InterPro :
IPR001675 : Glycosyl transferase, family 29
IPR022073 : Protein of unknown function DUF3625
GO :
0006486 : Biological Process : protein glycosylation
0008373 : Molecular Function : sialyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, cyto 11, nucl 10, mito 4, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000624083 (
ENST00000524834
)
(Glycosyl transferase, family 29 protein.)
genome : 126,276,398 - 126,310,239 (33,842)
query : 1 - 788 (788/788)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 10, extr 4, mito 1, E.R. 1, lyso 1,
cysk 1, E.R._mito 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000624109 (
ENST00000524860
)
(Glycosyl transferase, family 29 protein.)
genome : 126,276,677 - 126,283,892 (7,216)
query : 1 - 1,012 (1,012/1,012)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8, plas 5, nucl 5, pero 5, extr 4, cyto_golg 4,
E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000063207
(
AF035249
)
(Glycosyl transferase, family 29 protein.)
genome : 126,277,137 - 126,283,914 (6,778)
query : 1 - 801 (801/801)
7 exons
identity = 0.990
5'(0.972;1.000;1.000;0.979;1.000;0.993;1.000)3'
coverage = 1.000
InterPro :
IPR001675 : Glycosyl transferase, family 29
GO :
0006486 : Biological Process : protein glycosylation
0008373 : Molecular Function : sialyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0010256
HIT000632900 (
ENST00000533826
)
(Glycosyl transferase, family 29 protein.)
genome : 126,278,345 - 126,284,449 (6,105)
query : 1 - 1,037 (1,037/1,037)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12.5, mito 7, nucl 3.5,
E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
HIX0128664
HIT000048478
(
AK128605
)
Representative transcript
(Conserved hypothetical protein.)
genome : 126,280,573 - 126,284,531 (3,959)
query : 1 - 3,959 (3,959/3,959)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13.5, cyto 7, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0128664)
HIX0010257
HIT000001582
(
AB058770
)
Representative transcript
(Kin of IRRE-like protein 3; Kin of irregular chiasm-like protein 3; Nephrin-like protein 2; Precursor;)
genome : 126,293,254 - 126,870,655 (577,402)
query : 1 - 3,808 (3,808/3,808)
17 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17.5, extr_plas 11, E.R. 7, plas 3.5,
E.R._mito 3.5, E.R._golg 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010257)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK079332
Bos
sp. (Cow) : BC126490
Rattus
sp. (Rat) : DQ902828
Equus
sp. (Horse) : ENSECAT00000026521
Tetraodon
sp. (Tetraodon) : GSTENT00022100001
Takifugu
sp. (Fugu) : SINFRUT00000163495
Monodelphis
sp. (Opossum) : XM_001372418
Canis
sp. (Dog) : XM_546407
Danio
sp. (Zebrafish) : XM_695526
Danio
sp. (Zebrafish) : XM_696078
Macaca
sp. (Macaque) : XR_014110
Pan
sp. (Chimpanzee) : XR_023531
Gallus
sp. (Chicken) : XR_026874
HIX0010257
HIT000624388 (
ENST00000525144
)
(Kin of IRRE-like protein 3; Kin of irregular chiasm-like protein 3; Nephrin-like protein 2; Precursor;)
genome : 126,293,254 - 126,870,655 (577,402)
query : 1 - 3,808 (3,808/3,808)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17.5, extr_plas 11, E.R. 7, plas 3.5,
E.R._mito 3.5, E.R._golg 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010257)
HIX0010257
HIT000097228
(
BC042432
)
(Kin of IRRE-like protein 3; Kin of irregular chiasm-like protein 3; Nephrin-like protein 2; Precursor;)
genome : 126,293,391 - 126,870,416 (577,026)
query : 1 - 3,396 (3,396/3,488)
16 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR013098 : Immunoglobulin I-set
IPR013162 : CD80-like, immunoglobulin C2-set
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17.5, extr_plas 11, E.R. 7, plas 3.5,
E.R._mito 3.5, E.R._golg 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010257)
HIX0010257
HIT000210706 (
NM_032531
)
(Kin of IRRE-like protein 3; Kin of irregular chiasm-like protein 3; Nephrin-like protein 2; Precursor;)
genome : 126,293,396 - 126,870,766 (577,371)
query : 1 - 3,777 (3,777/3,794)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17.5, extr_plas 11, E.R. 7, plas 3.5,
E.R._mito 3.5, E.R._golg 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010257)
HIX0010257
HIT000628263 (
ENST00000529097
)
(Kin of IRRE-like protein 3; Kin of irregular chiasm-like protein 3; Nephrin-like protein 2; Precursor;)
genome : 126,293,390 - 126,870,416 (577,027)
query : 1 - 3,397 (3,397/3,397)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17.5, extr_plas 11, E.R. 7, plas 3.5,
E.R._mito 3.5, E.R._golg 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010257)
HIX0010257
HIT000252804
(
AY358760
)
(Kin of IRRE-like protein 3; Kin of irregular chiasm-like protein 3; Nephrin-like protein 2; Precursor;)
genome : 126,293,401 - 126,306,788 (13,388)
query : 7 - 1,948 (1,942/1,955)
6 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.993
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, cyto 2, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010257)
HIX0010257
HIT000494732
(
AK300108
)
(Kin of IRRE-like protein 3; Kin of irregular chiasm-like protein 3; Nephrin-like protein 2; Precursor;)
genome : 126,294,200 - 126,310,777 (16,578)
query : 1 - 1,356 (1,356/1,356)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR013098 : Immunoglobulin I-set
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 12, cyto 8, mito 6.5, E.R._mito 5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010257)
HIX0010257
HIT000514495 (
ENST00000416561
)
(Kin of IRRE-like protein 3; Kin of irregular chiasm-like protein 3; Nephrin-like protein 2; Precursor;)
genome : 126,294,200 - 126,310,453 (16,254)
query : 1 - 1,333 (1,333/1,333)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, nucl 2, cyto 2, E.R. 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010257)
HIX0010257
HIT000337148
(
BC101801
)
(Kin of IRRE-like protein 3; Kin of irregular chiasm-like protein 3; Nephrin-like protein 2; Precursor;)
genome : 126,294,403 - 126,870,491 (576,089)
query : 1 - 2,495 (2,495/2,495)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR013098 : Immunoglobulin I-set
IPR013162 : CD80-like, immunoglobulin C2-set
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17.5, extr_plas 11, E.R. 7, plas 3.5,
E.R._mito 3.5, E.R._golg 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010257)
HIX0010257
HIT000337123
(
BC101775
)
(Kin of IRRE-like protein 3; Kin of irregular chiasm-like protein 3; Nephrin-like protein 2; Precursor;)
genome : 126,294,408 - 126,870,491 (576,084)
query : 1 - 2,490 (2,490/2,490)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR013098 : Immunoglobulin I-set
IPR013162 : CD80-like, immunoglobulin C2-set
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17.5, extr_plas 11, E.R. 7, plas 3.5,
E.R._mito 3.5, E.R._golg 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010257)
HIX0010257
HIT000080451
(
AF480410
)
(Kin of IRRE-like protein 3; Kin of irregular chiasm-like protein 3; Nephrin-like protein 2; Precursor;)
genome : 126,294,475 - 126,870,405 (575,931)
query : 1 - 2,337 (2,337/2,337)
17 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;0.993;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR013098 : Immunoglobulin I-set
IPR013162 : CD80-like, immunoglobulin C2-set
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17.5, extr_plas 11, E.R. 7, plas 3.5,
E.R._mito 3.5, E.R._golg 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010257)
HIX0010257
HIT000631744 (
ENST00000532647
)
(Kin of IRRE-like protein 3; Kin of irregular chiasm-like protein 3; Nephrin-like protein 2; Precursor;)
genome : 126,299,074 - 126,310,777 (11,704)
query : 1 - 550 (550/550)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, cyto 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010257)
HIX0010257
HIT000625730 (
ENST00000526519
)
(Kin of IRRE-like protein 3; Kin of irregular chiasm-like protein 3; Nephrin-like protein 2; Precursor;)
genome : 126,299,074 - 126,310,764 (11,691)
query : 1 - 566 (566/566)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010257)
HIX0010257
HIT000562018 (
NM_001161707
)
(Kin of IRRE-like protein 3 isoform 2 precursor.)
genome : 126,300,837 - 126,870,766 (569,930)
query : 1 - 2,534 (2,534/2,536)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 9.5, extr_plas 7.5, cyto_pero 7.5, plas 6.5,
extr 5.5, cyto 4.5, nucl 2, E.R. 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010257)
HIX0010257
HIT000252787
(
AY358743
)
(Kin of IRRE-like protein 3 isoform 2 precursor.)
genome : 126,300,837 - 126,870,706 (569,870)
query : 1 - 2,474 (2,474/2,476)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR013098 : Immunoglobulin I-set
IPR013162 : CD80-like, immunoglobulin C2-set
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 9.5, extr_plas 7.5, cyto_pero 7.5, plas 6.5,
extr 5.5, cyto 4.5, nucl 2, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010257)
HIX0010257
HIT000624932 (
ENST00000525704
)
(Kin of IRRE-like protein 3 isoform 2 precursor.)
genome : 126,300,837 - 126,870,706 (569,870)
query : 1 - 2,474 (2,474/2,474)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 9.5, extr_plas 7.5, cyto_pero 7.5, plas 6.5,
extr 5.5, cyto 4.5, nucl 2, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010257)
HIX0010257
HIT000625972 (
ENST00000526764
)
(Kin of IRRE-like protein 3; Kin of irregular chiasm-like protein 3; Nephrin-like protein 2; Precursor;)
genome : 126,306,759 - 126,310,713 (3,955)
query : 1 - 516 (516/516)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9, extr 8, cyto 7, cyto_nucl 6.66667,
mito_nucl 6.66667, cyto_pero 6.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010257)
HIX0219565
HIT000662237 (
ENST00000548204
)
(Hypothetical short protein.)
genome : 126,413,842 - 126,480,843 (67,002)
query : 1 - 586 (586/586)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 12.5, extr 8, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219565)
HIX0010257
HIT000261818
(
BC065255
)
(Conserved hypothetical protein.)
genome : 126,419,180 - 126,873,355 (454,176)
query : 1 - 2,062 (2,062/2,076)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, extr 12, nucl 10.5, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010257)
HIX0010257
HIT000632113 (
ENST00000533026
)
(Conserved hypothetical protein.)
genome : 126,419,179 - 126,873,355 (454,177)
query : 1 - 2,063 (2,063/2,063)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, extr 12, nucl 10.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010257)
HIX0010257
HIT000016914
(
AK092047
)
(Conserved hypothetical protein.)
genome : 126,419,313 - 126,871,061 (451,749)
query : 1 - 2,019 (2,019/2,019)
3 exons
identity = 1.000
3'(1.000;1.000;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010257)
HIX0010257
HIT000661837 (
ENST00000547738
)
(Conserved hypothetical protein.)
genome : 126,419,313 - 126,871,061 (451,749)
query : 1 - 2,019 (2,019/2,019)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto_nucl 3.83333, cyto 3.5,
cyto_pero 2.66667, extr 2, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010257)
HIX0010257
HIT000264652
(
BC071838
)
(Kin of IRRE-like protein 3; Kin of irregular chiasm-like protein 3; Nephrin-like protein 2; Precursor;)
genome : 126,419,434 - 126,870,666 (451,233)
query : 1 - 1,507 (1,507/1,525)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, extr 11, cyto_nucl 9.5, cyto 4, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010257)
HIX0010257
HIT000663689 (
ENST00000549874
)
(Kin of IRRE-like protein 3; Kin of irregular chiasm-like protein 3; Nephrin-like protein 2; Precursor;)
genome : 126,419,434 - 126,870,666 (451,233)
query : 1 - 1,507 (1,507/1,507)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, extr 11, cyto_nucl 9.5, cyto 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010257)
HIX0210431
HIT000664459 (
ENST00000550747
)
(Conserved hypothetical protein.)
genome : 126,522,747 - 126,551,998 (29,252)
query : 1 - 399 (399/399)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 7, extr_plas 7, mito 5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210431)
HIX0210431
HIT000633672 (
ENST00000534620
)
(Conserved hypothetical protein.)
genome : 126,525,981 - 126,551,999 (26,019)
query : 1 - 408 (408/408)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210431)
HIX0026220
HIT000045315
(
AK125442
)
Representative transcript
(Conserved hypothetical protein.)
genome : 126,533,099 - 126,535,953 (2,855)
query : 1 - 2,855 (2,855/2,855)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 9, cyto_nucl 8.5, extr_plas 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026220)
HIX0210170
HIT000629718 (
ENST00000530572
)
(Hypothetical short protein.)
genome : 126,790,084 - 126,810,555 (20,472)
query : 1 - 566 (566/566)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, nucl 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210170)
HIX0026238
HIT000046688
(
AK126815
)
Representative transcript
(Conserved hypothetical protein.)
genome : 126,793,358 - 126,807,046 (13,689)
query : 1 - 2,511 (2,511/2,511)
2 exons
identity = 0.971
3'(0.767;0.995)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026238)
HIX0036370
HIT000092493
(
BC031955
)
Representative transcript
(Hypothetical short protein.)
genome : 126,810,642 - 126,814,984 (4,343)
query : 1 - 491 (491/509)
3 exons
identity = 0.996
5'(0.989;1.000;1.000)3'
coverage = 0.994
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036370)
HIX0036370
HIT000726877 (
NR_046986
)
(Hypothetical short protein.)
genome : 126,810,642 - 126,814,986 (4,345)
query : 1 - 494 (494/500)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.988
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036370)
HIX0036370
HIT000632075 (
ENST00000532988
)
(Hypothetical short protein.)
genome : 126,810,642 - 126,814,984 (4,343)
query : 1 - 492 (492/492)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036370)
HIX0036370
HIT000690030 (
ENST00000578084
)
(Hypothetical short protein.)
genome : 126,810,690 - 126,814,986 (4,297)
query : 1 - 429 (429/429)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 8.5, nucl 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036370)
HIX0210533
HIT000659390 (
NR_036126
)
(Non-protein coding transcript.)
genome : 126,858,354 - 126,858,438 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210533)
HIX0210533
HIT000691548 (
ENST00000579623
)
(Non-protein coding transcript.)
genome : 126,858,354 - 126,858,438 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210533)
HIX0210237
HIT000630708 (
ENST00000531585
)
(Conserved hypothetical protein.)
genome : 126,862,348 - 126,865,354 (3,007)
query : 1 - 462 (462/462)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 13.5, cyto_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210237)
HIX0010258
HIT000022397
(
AK097543
)
Representative transcript
(Conserved hypothetical protein.)
genome : 126,872,805 - 126,875,953 (3,149)
query : 1 - 1,769 (1,769/1,769)
3 exons
identity = 0.998
5'(0.997;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 10, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010258)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : ENSPTRT00000008262
HIX0010258
HIT000624907 (
ENST00000525678
)
(Conserved hypothetical protein.)
genome : 126,872,805 - 126,875,953 (3,149)
query : 1 - 1,768 (1,768/1,768)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010258)
HIX0010258
HIT000726139 (
NR_040078
)
(Conserved hypothetical protein.)
genome : 126,872,805 - 126,875,953 (3,149)
query : 1 - 1,768 (1,768/1,768)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 5, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010258)
HIX0010258
HIT000387046
(
BC113593
)
(Conserved hypothetical protein.)
genome : 126,873,298 - 126,874,130 (833)
query : 1 - 834 (834/834)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 10, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010258)
HIX0010258
HIT000387050
(
BC113597
)
(Conserved hypothetical protein.)
genome : 126,873,298 - 126,874,130 (833)
query : 1 - 834 (834/834)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 10, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010258)
HIX0010258
HIT000505010 (
ENST00000404882
)
(Conserved hypothetical protein.)
genome : 126,873,298 - 126,874,130 (833)
query : 1 - 831 (831/831)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 10, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010258)
HIX0210154
HIT000629329 (
ENST00000530177
)
(Hypothetical short protein.)
genome : 126,891,649 - 126,923,448 (31,800)
query : 1 - 572 (572/572)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 5.33333, cyto 5, nucl 4.5,
cyto_pero 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210154)
HIX0010259
HIT000020042
(
AK095187
)
Representative transcript
(Conserved hypothetical protein.)
genome : 126,936,897 - 126,971,212 (34,316)
query : 1 - 2,334 (2,334/2,338)
3 exons
identity = 0.995
5'(1.000;0.994;0.995)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010259)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001150738
HIX0010259
HIT000626520 (
ENST00000527317
)
(Conserved hypothetical protein.)
genome : 126,936,897 - 126,971,212 (34,316)
query : 1 - 2,334 (2,334/2,334)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 16, nucl 8.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010259)
HIX0036364
HIT000040947
(
BC030092
)
Representative transcript
(Conserved hypothetical protein.)
genome : 127,140,962 - 127,206,927 (65,966)
query : 1 - 497 (497/512)
3 exons
identity = 0.998
5'(0.991;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 5, golg 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036364)
HIX0171425
HIT000508819 (
ENST00000410842
)
(Hypothetical protein.)
genome : 127,275,923 - 127,276,227 (305)
query : 1 - 305 (305/305)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13.5, extr 8, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171425)
HIX0210144
HIT000629088 (
ENST00000529936
)
(Hypoxia induced protein, domain containing protein.)
genome : 127,527,463 - 127,527,772 (310)
query : 1 - 310 (310/310)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 10, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210144)
HIX0010253
HIT000206456 (
NM_017547
)
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,138,935 - 126,148,027 (9,093)
query : 1 - 2,071 (2,071/2,087)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 11.5, cyto_nucl 8, cyto 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010253)
HIX0010253
HIT000659937 (
NR_037647
)
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,138,935 - 126,148,027 (9,093)
query : 1 - 1,850 (1,850/1,866)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 17, cyto 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010253)
HIX0010253
HIT000632913 (
ENST00000533839
)
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,138,950 - 126,146,372 (7,423)
query : 1 - 559 (559/559)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, cyto_mito 14.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010253)
HIX0010253
HIT000108949 (
ENST00000263578
)
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,139,028 - 126,148,019 (8,992)
query : 1 - 1,970 (1,970/1,970)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 11.5, cyto_nucl 8, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010253)
HIX0010253
HIT000493431
(
AK298807
)
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,139,030 - 126,148,026 (8,997)
query : 1 - 1,955 (1,955/1,955)
11 exons
identity = 0.996
5'(0.994;0.976;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR006076 : FAD dependent oxidoreductase
GO :
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12, cyto 7.5, mito 4, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010253)
HIX0010253
HIT000633079 (
ENST00000534011
)
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,139,030 - 126,148,026 (8,997)
query : 1 - 1,955 (1,955/1,955)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12, mito 8.5, cyto_mito 8.5,
cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010253)
HIX0010253
HIT000069393
(
AF103801
)
Representative transcript
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,139,045 - 126,148,019 (8,975)
query : 9 - 1,961 (1,953/1,981)
11 exons
identity = 0.999
5'(0.993;1.000;0.991;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR006076 : FAD dependent oxidoreductase
GO :
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 11.5, cyto_nucl 8, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010253)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171161
Mus
sp. (Mouse) : BC017604
Rattus
sp. (Rat) : BC089114
Bos
sp. (Cow) : BC120036
Danio
sp. (Zebrafish) : ENSDART00000086021
Equus
sp. (Horse) : ENSECAT00000023987
Monodelphis
sp. (Opossum) : ENSMODT00000005783
Oryzias
sp. (Medaka) : ENSORLT00000018900
Pongo
sp. (Orangutan) : ENSPPYT00000004807
Tetraodon
sp. (Tetraodon) : GSTENT00005913001
Takifugu
sp. (Fugu) : SINFRUT00000173536
Pan
sp. (Chimpanzee) : XM_508852
Canis
sp. (Dog) : XM_852551
HIX0010253
HIT000659938 (
NR_037648
)
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,139,040 - 126,148,027 (8,988)
query : 1 - 2,090 (2,090/2,106)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, cyto_nucl 9.83333, nucl 8.5,
cyto_mito 6.33333, pero 6, plas 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010253)
HIX0010253
HIT000025519
(
AL136923
)
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,139,055 - 126,148,027 (8,973)
query : 1 - 1,951 (1,951/1,967)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006076 : FAD dependent oxidoreductase
GO :
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 11.5, cyto_nucl 8, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010253)
HIX0010253
HIT000007261
(
AK023987
)
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,139,066 - 126,148,021 (8,956)
query : 1 - 1,934 (1,934/1,934)
11 exons
identity = 0.998
5'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR006076 : FAD dependent oxidoreductase
GO :
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 11.5, cyto_nucl 8, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010253)
HIX0010253
HIT000496663
(
AK302039
)
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,139,066 - 126,147,735 (8,670)
query : 1 - 1,427 (1,427/1,427)
10 exons
identity = 0.999
5'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR006076 : FAD dependent oxidoreductase
GO :
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 17, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010253)
HIX0010253
HIT000539995 (
ENST00000442061
)
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,139,066 - 126,147,735 (8,670)
query : 1 - 1,427 (1,427/1,427)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 17, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010253)
HIX0010253
HIT000624995 (
ENST00000525770
)
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,139,066 - 126,147,735 (8,670)
query : 1 - 1,427 (1,427/1,427)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 17, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010253)
HIX0010253
HIT000490052
(
AK295428
)
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,139,066 - 126,147,674 (8,609)
query : 1 - 1,603 (1,603/1,603)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006076 : FAD dependent oxidoreductase
GO :
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, mito 11.5, cyto_nucl 10.5, cyto_mito 8,
cyto_pero 3.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010253)
HIX0010253
HIT000492634
(
AK298010
)
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,139,066 - 126,147,558 (8,493)
query : 1 - 1,228 (1,228/1,228)
9 exons
identity = 0.998
5'(0.992;0.991;1.000;1.000;1.000;1.000;1.000;
0.994;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 16, nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010253)
HIX0010253
HIT000624329 (
ENST00000525083
)
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,139,066 - 126,147,558 (8,493)
query : 1 - 1,228 (1,228/1,228)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 10, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010253)
HIX0010253
HIT000036394
(
BC013902
)
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,139,079 - 126,148,019 (8,941)
query : 1 - 1,919 (1,919/1,948)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR006076 : FAD dependent oxidoreductase
GO :
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 11.5, cyto_nucl 8, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010253)
HIX0010253
HIT000626210 (
ENST00000527004
)
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,139,085 - 126,147,964 (8,880)
query : 1 - 1,760 (1,760/1,760)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010253)
HIX0010253
HIT000625578 (
ENST00000526366
)
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,139,087 - 126,144,907 (5,821)
query : 1 - 553 (553/553)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010253)
HIX0010253
HIT000624001 (
ENST00000524751
)
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,139,089 - 126,145,244 (6,156)
query : 1 - 895 (895/895)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 11, cyto_nucl 4.66667, nucl 4.5,
cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010253)
HIX0010253
HIT000631212 (
ENST00000532101
)
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,139,096 - 126,145,762 (6,667)
query : 1 - 1,030 (1,030/1,030)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 5.5, plas 3.5, extr_plas 3.5,
E.R._mito 3.5, nucl 3, extr 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010253)
HIX0010253
HIT000489891
(
AK295267
)
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,139,104 - 126,147,826 (8,723)
query : 1 - 1,825 (1,825/1,825)
11 exons
identity = 0.999
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR006076 : FAD dependent oxidoreductase
GO :
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, cyto_nucl 9.83333, nucl 8.5,
cyto_mito 6.33333, pero 6, plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010253)
HIX0010253
HIT000631236 (
ENST00000532125
)
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,139,104 - 126,147,826 (8,723)
query : 1 - 1,825 (1,825/1,825)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, cyto_nucl 9.83333, nucl 8.5,
cyto_mito 6.33333, pero 6, plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010253)
HIX0010253
HIT000243079
(
AF447877
)
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,140,840 - 126,148,021 (7,182)
query : 2 - 2,220 (2,219/2,240)
9 exons
identity = 0.995
5'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994)3'
coverage = 0.999
InterPro :
IPR006076 : FAD dependent oxidoreductase
GO :
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, mito 6, E.R._mito 4.5, plas 3.5,
extr_plas 3.5, extr 2.5, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010253)
HIX0010253
HIT000633376 (
ENST00000534315
)
(FAD-dependent oxidoreductase domain-containing protein 1;)
genome : 126,140,840 - 126,148,021 (7,182)
query : 1 - 2,210 (2,210/2,210)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, mito 6, E.R._mito 4.5, plas 3.5,
extr_plas 3.5, extr 2.5, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010253)
HIX0219237
pHIT000111147 ( pHIT000111147 )
(Conserved hypothetical protein.)
genome : 126,138,698 - 126,147,584 (8,887)
query : 1 - 1,488 (1,488/1,488)
10 exons
InterPro :
IPR006076 : FAD dependent oxidoreductase
GO :
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219237)
CAGE tag :
T11F077D2D7A
HIX0010256
pHIT000084815 ( pHIT000084815 )
(Hypothetical short protein.)
genome : 126,224,965 - 126,233,674 (8,710)
query : 1 - 189 (189/189)
4 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
CAGE tag :
H05BC33B1903,H05BF91F2006,H08BA37A1001
H15BA26H1210,H39BB62C1509
HIX0010256
pHIT000083711 ( pHIT000083711 )
(Conserved hypothetical protein.)
genome : 126,227,063 - 126,256,979 (29,917)
query : 1 - 279 (279/279)
4 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010256)
CAGE tag :
H04BB23D0304,H05BE58B0706,H08BA64P0604
H21BB30F0407,H22BA45L1002
AP000821.5
126000001-126022742 F +
NCBI
AP001893.5
126022743-126092274 F +
NCBI
AP000717.5
126092275-126097623 F +
NCBI
AP001318.6
126097624-126254229 F +
NCBI
AP000806.4
126254230-126371708 F +
NCBI
AP000741.4
126371709-126524852 F +
NCBI
AP001783.4
126524853-126606099 F +
NCBI
AP002832.3
126606100-126720996 F +
NCBI
AP002833.3
126720997-126893557 F +
NCBI
AP001973.4
126893558-126915390 F +
NCBI
AP001993.5
126915391-127001582 F +
NCBI
AP003121.2
127001583-127111806 F +
NCBI
AP003481.2
127111807-127186066 F +
NCBI
AP003462.2
127186067-127345659 F +
NCBI
AP003503.2
127345660-127479684 F +
NCBI
AP003532.2
127479685-127600000 F +
NCBI