bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0009908
HIT000032812
(
BC006404
)
Representative transcript
(Caseinolytic peptidase B protein homolog; Suppressor of potassium transport defect 3;)
genome : 72,003,471 - 72,145,568 (142,098)
query : 1 - 3,114 (3,114/3,131)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001270 : ClpA/B family
IPR002110 : Ankyrin repeat
IPR003593 : AAA+ ATPase domain
IPR003959 : ATPase, AAA-type, core
IPR019489 : Clp ATPase, C-terminal
IPR020683 : Ankyrin repeat-containing domain
GO :
0000166 : Molecular Function : nucleotide binding
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30, cyto_mito 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169361
Mus
sp. (Mouse) : AK032421
Bos
sp. (Cow) : BT020885
Pongo
sp. (Orangutan) : CR857073
Canis
sp. (Dog) : ENSCAFT00000009223
Equus
sp. (Horse) : ENSECAT00000012418
Oryzias
sp. (Medaka) : ENSORLT00000014103
Rattus
sp. (Rat) : ENSRNOT00000026665
Takifugu
sp. (Fugu) : SINFRUT00000137929
Pan
sp. (Chimpanzee) : XM_001174710
Monodelphis
sp. (Opossum) : XM_001369427
Danio
sp. (Zebrafish) : XM_693793
HIX0009908
HIT000209966 (
NM_030813
)
(Caseinolytic peptidase B protein homolog; Suppressor of potassium transport defect 3;)
genome : 72,003,469 - 72,145,724 (142,256)
query : 1 - 3,272 (3,272/3,272)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30, cyto_mito 18
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0009908
HIT000724264 (
NM_001258392
)
(Caseinolytic peptidase B protein homolog; Suppressor of potassium transport defect 3;)
genome : 72,003,469 - 72,145,724 (142,256)
query : 1 - 3,182 (3,182/3,182)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30, cyto_mito 18
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0009908
HIT000724265 (
NM_001258393
)
(Caseinolytic peptidase B protein homolog; Suppressor of potassium transport defect 3;)
genome : 72,003,469 - 72,145,724 (142,256)
query : 1 - 3,095 (3,095/3,095)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30, cyto_mito 18
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0009908
HIT000724266 (
NM_001258394
)
(Caseinolytic peptidase B protein homolog isoform 4.)
genome : 72,003,469 - 72,145,724 (142,256)
query : 1 - 3,379 (3,379/3,379)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 7, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0009908
HIT000113794 (
ENST00000294053
)
(Caseinolytic peptidase B protein homolog; Suppressor of potassium transport defect 3;)
genome : 72,003,469 - 72,145,692 (142,224)
query : 1 - 3,240 (3,240/3,240)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30, cyto_mito 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0009908
HIT000637084 (
ENST00000538039
)
(Caseinolytic peptidase B protein homolog; Suppressor of potassium transport defect 3;)
genome : 72,003,490 - 72,145,641 (142,152)
query : 1 - 3,078 (3,078/3,078)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30, cyto_mito 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0009908
HIT000006488
(
AK023214
)
(Caseinolytic peptidase B protein homolog; Suppressor of potassium transport defect 3;)
genome : 72,003,490 - 72,145,578 (142,089)
query : 1 - 3,015 (3,015/3,015)
16 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.990;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001270 : ClpA/B family
IPR002110 : Ankyrin repeat
IPR003593 : AAA+ ATPase domain
IPR003959 : ATPase, AAA-type, core
IPR019489 : Clp ATPase, C-terminal
IPR020683 : Ankyrin repeat-containing domain
GO :
0000166 : Molecular Function : nucleotide binding
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30, cyto_mito 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0009908
HIT000029214
(
AL834484
)
(Caseinolytic peptidase B protein homolog isoform 3.)
genome : 72,004,309 - 72,018,299 (13,991)
query : 1 - 1,071 (1,071/1,127)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001270 : ClpA/B family
IPR003959 : ATPase, AAA-type, core
IPR019489 : Clp ATPase, C-terminal
GO :
0005524 : Molecular Function : ATP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.5, nucl 5, extr 4, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0009908
HIT000050462
(
BC006257
)
(Caseinolytic peptidase B protein homolog isoform 3.)
genome : 72,004,354 - 72,019,628 (15,275)
query : 1 - 1,108 (1,108/1,130)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001270 : ClpA/B family
IPR003959 : ATPase, AAA-type, core
IPR019489 : Clp ATPase, C-terminal
GO :
0005524 : Molecular Function : ATP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14, mito 3, pero 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0009908
HIT000025505
(
AL136909
)
(Caseinolytic peptidase B protein homolog; Suppressor of potassium transport defect 3;)
genome : 72,004,346 - 72,145,627 (141,282)
query : 1 - 2,298 (2,298/2,307)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.990;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001270 : ClpA/B family
IPR002110 : Ankyrin repeat
IPR003593 : AAA+ ATPase domain
IPR003959 : ATPase, AAA-type, core
IPR019489 : Clp ATPase, C-terminal
IPR020683 : Ankyrin repeat-containing domain
GO :
0000166 : Molecular Function : nucleotide binding
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30, cyto_mito 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0009908
HIT000133359 (
ENST00000340729
)
(Caseinolytic peptidase B protein homolog isoform 3.)
genome : 72,004,347 - 72,145,578 (141,232)
query : 1 - 2,071 (2,071/2,071)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30, cyto_mito 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0009908
HIT000496630
(
AK302006
)
(Caseinolytic peptidase B protein homolog isoform 2.)
genome : 72,004,347 - 72,145,571 (141,225)
query : 1 - 2,064 (2,064/2,064)
15 exons
identity = 1.000
3'(1.000;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001270 : ClpA/B family
IPR002110 : Ankyrin repeat
IPR003593 : AAA+ ATPase domain
IPR003959 : ATPase, AAA-type, core
IPR019489 : Clp ATPase, C-terminal
IPR020683 : Ankyrin repeat-containing domain
GO :
0000166 : Molecular Function : nucleotide binding
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30, cyto_mito 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0009908
HIT000496693
(
AK302069
)
(Caseinolytic peptidase B protein homolog isoform 4.)
genome : 72,004,347 - 72,145,426 (141,080)
query : 1 - 2,203 (2,203/2,203)
18 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;0.978;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001270 : ClpA/B family
IPR002110 : Ankyrin repeat
IPR003593 : AAA+ ATPase domain
IPR003959 : ATPase, AAA-type, core
IPR019489 : Clp ATPase, C-terminal
IPR020683 : Ankyrin repeat-containing domain
GO :
0000166 : Molecular Function : nucleotide binding
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 7, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0009908
HIT000535760 (
ENST00000437826
)
(Caseinolytic peptidase B protein homolog isoform 4.)
genome : 72,004,347 - 72,145,426 (141,080)
query : 1 - 2,203 (2,203/2,203)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 7, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0009908
HIT000635035 (
ENST00000535990
)
(Caseinolytic peptidase B protein homolog isoform 4.)
genome : 72,004,347 - 72,145,426 (141,080)
query : 1 - 2,203 (2,203/2,203)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 7, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0009908
HIT000496782
(
AK302158
)
(Caseinolytic peptidase B protein homolog isoform 2.)
genome : 72,004,353 - 72,145,684 (141,332)
query : 1 - 2,133 (2,133/2,133)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001270 : ClpA/B family
IPR002110 : Ankyrin repeat
IPR003593 : AAA+ ATPase domain
IPR003959 : ATPase, AAA-type, core
IPR019489 : Clp ATPase, C-terminal
IPR020683 : Ankyrin repeat-containing domain
GO :
0000166 : Molecular Function : nucleotide binding
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 10, E.R. 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0009908
HIT000642087 (
ENST00000543042
)
(Caseinolytic peptidase B protein homolog isoform 2.)
genome : 72,004,353 - 72,145,684 (141,332)
query : 1 - 2,133 (2,133/2,133)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 10, E.R. 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0009908
HIT000637066 (
ENST00000538021
)
(Caseinolytic peptidase B protein homolog isoform 3.)
genome : 72,004,354 - 72,019,628 (15,275)
query : 1 - 1,108 (1,108/1,108)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14, mito 3, pero 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0009908
HIT000634522 (
ENST00000535477
)
(Caseinolytic peptidase B protein homolog isoform 2.)
genome : 72,004,360 - 72,145,554 (141,195)
query : 1 - 2,047 (2,047/2,047)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29, cyto_mito 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0009908
HIT000643427 (
ENST00000544382
)
(Caseinolytic peptidase B protein homolog isoform 3.)
genome : 72,005,665 - 72,070,250 (64,586)
query : 1 - 982 (982/982)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, extr 9, mito 4, E.R. 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0210518
HIT000645110 (
ENST00000546065
)
(Hypothetical protein.)
genome : 72,013,183 - 72,014,009 (827)
query : 1 - 578 (578/578)
2 exons
identity = 0.997
5'(0.991;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210518)
HIX0009908
HIT000643728 (
ENST00000544683
)
(Caseinolytic peptidase B protein homolog isoform 2.)
genome : 72,028,242 - 72,141,538 (113,297)
query : 1 - 624 (624/624)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11, extr 6, mito 6, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0210503
HIT000643240 (
ENST00000544195
)
(Hypothetical short protein.)
genome : 72,062,391 - 72,064,254 (1,864)
query : 1 - 560 (560/560)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 12, cyto_nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210503)
HIX0009908
HIT000543003 (
ENST00000445069
)
(Caseinolytic peptidase B protein homolog; Suppressor of potassium transport defect 3;)
genome : 72,065,311 - 72,145,657 (80,347)
query : 1 - 815 (815/815)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0210458
HIT000636772 (
ENST00000537727
)
(Hypothetical short protein.)
genome : 72,065,560 - 72,074,599 (9,040)
query : 1 - 550 (550/550)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, extr 5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210458)
HIX0009908
HIT000635342 (
ENST00000536297
)
(Conserved hypothetical protein.)
genome : 72,067,925 - 72,084,060 (16,136)
query : 21 - 479 (459/479)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.958
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 10, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0009908
HIT000638193 (
ENST00000539148
)
(Caseinolytic peptidase B protein homolog isoform 1.)
genome : 72,069,923 - 72,141,489 (71,567)
query : 1 - 545 (545/564)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.966
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto_nucl 8.5, cyto 7.5, nucl 6.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0210510
HIT000644004 (
ENST00000544959
)
(Hypothetical short protein.)
genome : 72,121,760 - 72,123,123 (1,364)
query : 1 - 492 (492/492)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 13.5, cyto_nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210510)
HIX0009908
HIT000641600 (
ENST00000542555
)
(Caseinolytic peptidase B protein homolog isoform 4.)
genome : 72,139,852 - 72,145,185 (5,334)
query : 1 - 421 (421/421)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 7.5, cyto_nucl 7.16667, cyto_pero 5.5,
nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0009908
HIT000639516 (
ENST00000540471
)
(Caseinolytic peptidase B protein homolog isoform 3.)
genome : 72,140,683 - 72,145,661 (4,979)
query : 1 - 694 (694/694)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, extr 4, nucl 1, pero 1, golg 1, cysk_plas 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009908)
HIX0171569
HIT000551435 (
ENST00000453501
)
(NAD:arginine ADP-ribosyltransferase, ART family protein.)
genome : 72,189,801 - 72,190,281 (481)
query : 19 - 499 (481/499)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.964
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 7.16667, nucl 5.5, cyto 5.5,
cyto_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171569)
HIX0171447
HIT000513455 (
ENST00000415521
)
(NAD:arginine ADP-ribosyltransferase, ART family protein.)
genome : 72,231,981 - 72,232,777 (797)
query : 26 - 822 (797/822)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.970
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 6, mito 6, cyto_mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171447)
HIX0017809
HIT000027709
(
AL832797
)
Representative transcript
(Conserved hypothetical protein.)
genome : 72,281,704 - 72,284,266 (2,563)
query : 1 - 2,442 (2,442/2,458)
2 exons
identity = 0.997
5'(0.992;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017809)
HIX0017809
HIT000548738 (
ENST00000450804
)
(Conserved hypothetical protein.)
genome : 72,281,704 - 72,284,273 (2,570)
query : 1 - 2,450 (2,450/2,450)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, mito 10, extr_plas 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017809)
HIX0009909
HIT000221019
(
U67733
)
Representative transcript
(cGMP-dependent 3',5'-cyclic phosphodiesterase; EC=3.1.4.17; Cyclic GMP-stimulated phosphodiesterase; CGS-PDE; cGSPDE;)
genome : 72,287,185 - 72,385,412 (98,228)
query : 1 - 4,222 (4,222/4,240)
31 exons
identity = 0.996
3'(0.989;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9, nucl 8.5, cyto 8.5, mito 8, extr 3,
pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC086800
Equus
sp. (Horse) : ENSECAT00000020671
Oryzias
sp. (Medaka) : ENSORLT00000009688
Pongo
sp. (Orangutan) : ENSPPYT00000004346
Bos
sp. (Cow) : L49503
Takifugu
sp. (Fugu) : SINFRUT00000128979
Rattus
sp. (Rat) : U21101
Pan
sp. (Chimpanzee) : XM_001174736
Monodelphis
sp. (Opossum) : XM_001369136
Danio
sp. (Zebrafish) : XM_684746
Canis
sp. (Dog) : XM_846858
Macaca
sp. (Macaque) : XR_014327
HIX0009909
HIT000052475
(
BC040974
)
(cGMP-dependent 3',5'-cyclic phosphodiesterase; EC=3.1.4.17; Cyclic GMP-stimulated phosphodiesterase; CGS-PDE; cGSPDE;)
genome : 72,287,185 - 72,385,463 (98,279)
query : 6 - 4,286 (4,281/4,301)
31 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;0.987;1.000;
1.000;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.986;1.000)5'
coverage = 0.999
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9, nucl 8.5, cyto 8.5, mito 8, extr 3,
pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000199487 (
NM_002599
)
(cGMP-dependent 3',5'-cyclic phosphodiesterase; EC=3.1.4.17; Cyclic GMP-stimulated phosphodiesterase; CGS-PDE; cGSPDE;)
genome : 72,287,184 - 72,385,497 (98,314)
query : 1 - 4,316 (4,316/4,329)
31 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9, nucl 8.5, cyto 8.5, mito 8, extr 3,
pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000561640 (
NM_001146209
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A2 precursor.)
genome : 72,287,184 - 72,380,108 (92,925)
query : 1 - 4,183 (4,183/4,196)
32 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 12, nucl 11, mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000560870 (
NM_001143839
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A2 precursor.)
genome : 72,287,184 - 72,353,504 (66,321)
query : 1 - 4,133 (4,133/4,146)
30 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, pero 7, extr_plas 7, E.R. 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000723038 (
NM_001243784
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A1.)
genome : 72,287,184 - 72,353,504 (66,321)
query : 1 - 4,195 (4,195/4,208)
31 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 14, nucl 13, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000128968 (
ENST00000334456
)
(cGMP-dependent 3',5'-cyclic phosphodiesterase; EC=3.1.4.17; Cyclic GMP-stimulated phosphodiesterase; CGS-PDE; cGSPDE;)
genome : 72,287,185 - 72,385,497 (98,313)
query : 1 - 4,315 (4,315/4,315)
31 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9, nucl 8.5, cyto 8.5, mito 8, extr 3,
pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000541969 (
ENST00000444035
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A4.)
genome : 72,287,186 - 72,379,385 (92,200)
query : 1 - 4,041 (4,041/4,041)
31 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 12, nucl 11, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000019879
(
AK095024
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A2 precursor.)
genome : 72,287,186 - 72,369,168 (81,983)
query : 2 - 3,244 (3,243/3,244)
31 exons
identity = 0.984
3'(0.977;0.964;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.765;0.989)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 12, nucl 11, pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000638412 (
ENST00000539367
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A1.)
genome : 72,287,186 - 72,353,487 (66,302)
query : 1 - 3,096 (3,096/3,096)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14.5, nucl 9.5, cyto_pero 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000017145
(
AK092278
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A1.)
genome : 72,287,186 - 72,353,478 (66,293)
query : 1 - 3,086 (3,086/3,086)
27 exons
identity = 0.998
3'(0.999;0.960;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14.5, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000249813
(
AK131525
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A2 precursor.)
genome : 72,287,186 - 72,353,475 (66,290)
query : 1 - 3,355 (3,355/3,355)
21 exons
identity = 0.998
3'(0.997;0.991;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.989;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, E.R. 7, pero 6, lyso 5, mito_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000357730 (
ENST00000376450
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A2 precursor.)
genome : 72,287,186 - 72,353,475 (66,290)
query : 1 - 3,355 (3,355/3,355)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, E.R. 7, pero 6, lyso 5, mito_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000643615 (
ENST00000544570
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A2 precursor.)
genome : 72,288,198 - 72,353,504 (65,307)
query : 1 - 3,119 (3,119/3,119)
30 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, pero 7, extr_plas 7, E.R. 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000490300
(
AK295676
)
(cGMP-dependent 3',5'-cyclic phosphodiesterase; EC=3.1.4.17; Cyclic GMP-stimulated phosphodiesterase; CGS-PDE; cGSPDE;)
genome : 72,288,255 - 72,385,452 (97,198)
query : 1 - 2,855 (2,855/2,855)
27 exons
identity = 0.998
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;1.000;0.982;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9, nucl 8.5, cyto_nucl 8.5, cyto 7.5, extr 3,
pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000516688 (
ENST00000418754
)
(cGMP-dependent 3',5'-cyclic phosphodiesterase; EC=3.1.4.17; Cyclic GMP-stimulated phosphodiesterase; CGS-PDE; cGSPDE;)
genome : 72,288,255 - 72,385,452 (97,198)
query : 1 - 2,855 (2,855/2,855)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9, nucl 8.5, cyto_nucl 8.5, cyto 7.5, extr 3,
pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000254937
(
AY495087
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A2 precursor.)
genome : 72,288,340 - 72,380,108 (91,769)
query : 1 - 3,027 (3,027/3,027)
32 exons
identity = 0.998
3'(1.000;0.991;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.985;1.000;
1.000;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;0.986;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 12, nucl 11, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000639390 (
ENST00000540345
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A4.)
genome : 72,288,340 - 72,380,108 (91,769)
query : 1 - 3,027 (3,027/3,027)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 12, nucl 11, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000431300
(
AK312434
)
(cGMP-dependent 3',5'-cyclic phosphodiesterase; EC=3.1.4.17; Cyclic GMP-stimulated phosphodiesterase; CGS-PDE; cGSPDE;)
genome : 72,288,428 - 72,385,460 (97,033)
query : 1 - 3,034 (3,034/3,034)
31 exons
identity = 0.998
3'(0.995;1.000;1.000;1.000;1.000;0.987;1.000;
1.000;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.989;
1.000;1.000;0.989)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9, nucl 8.5, cyto 8.5, mito 8, extr 3,
pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000635963 (
ENST00000536918
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A1.)
genome : 72,288,589 - 72,290,549 (1,961)
query : 1 - 531 (531/531)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 14.3333, cyto_plas 12.8333, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000518435 (
ENST00000420501
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A1.)
genome : 72,289,954 - 72,293,413 (3,460)
query : 1 - 1,027 (1,027/1,027)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 12, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000643284 (
ENST00000544239
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A1.)
genome : 72,290,005 - 72,290,940 (936)
query : 1 - 512 (512/512)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.5, extr 9, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000539143 (
ENST00000441209
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A1.)
genome : 72,290,325 - 72,295,517 (5,193)
query : 1 - 982 (982/982)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 13, nucl 3, E.R. 3, extr 1, mito 1,
pero 1, lyso 1, golg 1, mito_pero 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000641268 (
ENST00000542223
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A1.)
genome : 72,290,593 - 72,294,607 (4,015)
query : 1 - 639 (639/639)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 8, cysk 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000580032 (
ENST00000475807
)
(cGMP-dependent 3',5'-cyclic phosphodiesterase; EC=3.1.4.17; Cyclic GMP-stimulated phosphodiesterase; CGS-PDE; cGSPDE;)
genome : 72,295,595 - 72,301,463 (5,869)
query : 1 - 1,009 (1,009/1,009)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16.5, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0210511
HIT000644299 (
ENST00000545254
)
(Conserved hypothetical protein.)
genome : 72,295,616 - 72,299,023 (3,408)
query : 1 - 664 (664/664)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12, cyto 7.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210511)
HIX0009909
HIT000637344 (
ENST00000538299
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A1.)
genome : 72,296,594 - 72,301,065 (4,472)
query : 1 - 510 (510/515)
6 exons
identity = 0.998
3'(0.977;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.990
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 7.5, mito 5, cyto_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000635353 (
ENST00000536308
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A2 precursor.)
genome : 72,301,243 - 72,353,455 (52,213)
query : 1 - 597 (597/597)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000588882 (
ENST00000485058
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A1.)
genome : 72,301,253 - 72,354,175 (52,923)
query : 1 - 816 (816/816)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 12.5, extr 10, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000642795 (
ENST00000543750
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A2 precursor.)
genome : 72,301,523 - 72,353,504 (51,982)
query : 1 - 563 (563/563)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000642620 (
ENST00000543575
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A1.)
genome : 72,301,551 - 72,353,466 (51,916)
query : 1 - 544 (544/544)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 12.5, extr 10, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000594295 (
ENST00000490749
)
(Conserved hypothetical protein.)
genome : 72,301,977 - 72,307,670 (5,694)
query : 1 - 458 (458/458)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, mito 11, cyto_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000641043 (
ENST00000541998
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A1.)
genome : 72,302,222 - 72,353,470 (51,249)
query : 1 - 593 (593/593)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 12.5, extr 10, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000637794 (
ENST00000538749
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A1.)
genome : 72,307,635 - 72,354,662 (47,028)
query : 1 - 547 (547/553)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.989
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 8.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000636676 (
ENST00000537631
)
(Conserved hypothetical protein.)
genome : 72,307,668 - 72,347,174 (39,507)
query : 1 - 527 (527/527)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 10.5, cyto_nucl 7.83333, cyto 4,
cyto_pero 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000639425 (
ENST00000540380
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A4.)
genome : 72,308,554 - 72,385,635 (77,082)
query : 1 - 744 (744/764)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.974
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto 9, mito 9, cyto_nucl 7.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000634746 (
ENST00000535701
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A1.)
genome : 72,316,168 - 72,385,466 (69,299)
query : 1 - 541 (541/543)
4 exons
identity = 0.991
3'(0.952;1.000;1.000;1.000)5'
coverage = 0.996
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 6, cyto_nucl 6, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000642014 (
ENST00000542969
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A1.)
genome : 72,316,181 - 72,385,477 (69,297)
query : 1 - 612 (612/613)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 11.5, nucl 10.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000254939
(
AY495089
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A2 precursor.)
genome : 72,319,755 - 72,353,467 (33,713)
query : 1 - 210 (210/210)
2 exons
identity = 0.995
3'(0.976;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0128381
HIT000470993 (
ENST00000385074
)
(Non-protein coding transcript.)
genome : 72,326,107 - 72,326,174 (68)
query : 1 - 68 (68/68)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0128381)
HIX0128381
HIT000658002 (
NR_029603
)
(Non-protein coding transcript.)
genome : 72,326,107 - 72,326,174 (68)
query : 1 - 68 (68/68)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0128381)
HIX0009909
HIT000254938
(
AY495088
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A3.)
genome : 72,342,121 - 72,385,461 (43,341)
query : 1 - 417 (417/430)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.970
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000645083 (
ENST00000546038
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A4.)
genome : 72,342,126 - 72,385,494 (43,369)
query : 1 - 574 (574/574)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 5.66667, nucl 5.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0009909
HIT000635503 (
ENST00000536458
)
(CGMP-dependent 3',5'-cyclic phosphodiesterase isoform PDE2A4.)
genome : 72,353,298 - 72,369,165 (15,868)
query : 1 - 344 (344/344)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 14, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009909)
HIX0210479
HIT000639957 (
ENST00000540912
)
(Hypothetical short protein.)
genome : 72,354,281 - 72,370,451 (16,171)
query : 1 - 562 (562/562)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, nucl 3.5, cyto_nucl 3.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210479)
HIX0219248
HIT000054159
(
BC056401
)
Representative transcript
(Pleckstrin homology domain containing protein.)
genome : 72,396,114 - 72,411,411 (15,298)
query : 1 - 2,758 (2,758/2,812)
20 exons
identity = 0.999
3'(1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.984;1.000)5'
coverage = 1.000
InterPro :
IPR000159 : Ras-association
IPR000198 : Rho GTPase-activating protein domain
IPR001849 : Pleckstrin homology domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 11, mito 8, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219248)
HIX0219248
HIT000087030
(
BC008315
)
(Rho GTPase-activating protein domain containing protein.)
genome : 72,396,114 - 72,409,153 (13,040)
query : 10 - 2,385 (2,376/2,403)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.996
InterPro :
IPR000159 : Ras-association
IPR000198 : Rho GTPase-activating protein domain
IPR001849 : Pleckstrin homology domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15, nucl 10.5, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219248)
HIX0219248
HIT000090405
(
BC021244
)
(Rho GTPase-activating protein domain containing protein.)
genome : 72,396,119 - 72,410,527 (14,409)
query : 1 - 2,538 (2,538/2,556)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.981;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000159 : Ras-association
IPR000198 : Rho GTPase-activating protein domain
IPR001849 : Pleckstrin homology domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 12.5, nucl 8, mito 5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219248)
HIX0219248
HIT000599226 (
ENST00000495878
)
(Pleckstrin homology domain containing protein.)
genome : 72,396,114 - 72,411,411 (15,298)
query : 1 - 2,758 (2,758/2,758)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15, nucl 10, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219248)
HIX0210485
HIT000641067 (
ENST00000542022
)
(Non-protein coding transcript.)
genome : 72,396,120 - 72,404,853 (8,734)
query : 1 - 388 (388/388)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210485)
HIX0219248
HIT000643766 (
ENST00000544721
)
(Pleckstrin homology domain containing protein.)
genome : 72,396,653 - 72,399,933 (3,281)
query : 1 - 773 (773/773)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 8, extr 5, nucl 4, cyto_pero 4,
cyto_plas 4, cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219248)
HIX0219248
HIT000641641 (
ENST00000542596
)
(Ras-association domain containing protein.)
genome : 72,396,689 - 72,406,130 (9,442)
query : 1 - 699 (699/699)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 18, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219248)
HIX0219248
HIT000635930 (
ENST00000536885
)
(Conserved hypothetical protein.)
genome : 72,396,740 - 72,399,526 (2,787)
query : 1 - 639 (639/639)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 9, mito_nucl 9, nucl 6, E.R._mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219248)
HIX0219248
HIT000640668 (
ENST00000541623
)
(Conserved hypothetical protein.)
genome : 72,397,087 - 72,399,582 (2,496)
query : 1 - 533 (533/533)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 10.5, cyto_nucl 10.3333,
cyto_pero 6.33333, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219248)
HIX0219248
HIT000641657 (
ENST00000542612
)
(Conserved hypothetical protein.)
genome : 72,398,305 - 72,400,591 (2,287)
query : 1 - 428 (428/428)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219248)
HIX0219248
HIT000389422
(
BC127799
)
(Conserved hypothetical protein.)
genome : 72,403,726 - 72,404,526 (801)
query : 3 - 802 (800/804)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 10, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219248)
HIX0219248
HIT000435908
(
BC150585
)
(Conserved hypothetical protein.)
genome : 72,403,726 - 72,404,526 (801)
query : 3 - 802 (800/804)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 10, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219248)
HIX0219248
HIT000644003 (
ENST00000544958
)
(Ras-association domain containing protein.)
genome : 72,404,153 - 72,406,121 (1,969)
query : 1 - 473 (473/473)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219248)
HIX0219248
HIT000642913 (
ENST00000543868
)
(Ras-association domain containing protein.)
genome : 72,404,184 - 72,406,085 (1,902)
query : 1 - 507 (507/507)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 11.5, cyto_nucl 7.5, extr_plas 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219248)
HIX0219248
HIT000636038 (
ENST00000536993
)
(Ras-association domain containing protein.)
genome : 72,404,722 - 72,406,499 (1,778)
query : 1 - 315 (315/315)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 3, cyto 3, mito 3, cyto_nucl 3,
cyto_mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219248)
HIX0219248
HIT000645338 (
ENST00000546293
)
(Ras-association domain containing protein.)
genome : 72,404,805 - 72,408,066 (3,262)
query : 1 - 702 (702/702)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 10, cyto_nucl 4.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219248)
HIX0219248
HIT000525905 (
ENST00000427971
)
(Pleckstrin homology domain containing protein.)
genome : 72,408,136 - 72,414,256 (6,121)
query : 1 - 1,101 (1,101/1,101)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 16, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219248)
HIX0219248
HIT000550317 (
ENST00000452383
)
(Pleckstrin homology domain containing protein.)
genome : 72,408,421 - 72,414,456 (6,036)
query : 1 - 994 (994/994)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 15.5, nucl 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219248)
HIX0171326
HIT000045626
(
AK125753
)
Representative transcript
(Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1; Centaurin-delta-2; Cnt-d2;)
genome : 72,411,519 - 72,416,652 (5,134)
query : 1 - 1,824 (1,824/1,824)
2 exons
identity = 0.998
5'(1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 6.5, cyto_pero 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171326)
HIX0171326
HIT000602267 (
ENST00000500163
)
(Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1; Centaurin-delta-2; Cnt-d2;)
genome : 72,411,519 - 72,416,652 (5,134)
query : 1 - 1,824 (1,824/1,824)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171326)
HIX0209701
HIT000568874 (
ENST00000464109
)
(Conserved hypothetical protein.)
genome : 72,419,231 - 72,419,610 (380)
query : 1 - 380 (380/380)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 6, cyto 2.5, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209701)
HIX0219560
HIT000641309 (
ENST00000542264
)
(Conserved hypothetical protein.)
genome : 72,420,888 - 72,421,615 (728)
query : 1 - 271 (271/271)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 5.5, nucl 5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219560)
HIX0009911
HIT000050585
(
BC014033
)
Representative transcript
(PCTP-like protein; PCTP-L; Antigen NY-CO-28; START domain-containing protein 10; StARD10; Serologically defined colon cancer antigen 28; StAR-related lipid transfer protein 10;)
genome : 72,465,774 - 72,504,696 (38,923)
query : 1 - 1,507 (1,507/1,531)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR002913 : START domain
IPR023393 : START-like domain
GO :
0008289 : Molecular Function : lipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 16.5, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AB031550
Macaca
sp. (Macaque) : AB168575
Danio
sp. (Zebrafish) : BC046038
Rattus
sp. (Rat) : BC091411
Canis
sp. (Dog) : ENSCAFT00000009119
Equus
sp. (Horse) : ENSECAT00000016240
Gallus
sp. (Chicken) : ENSGALT00000004063
Oryzias
sp. (Medaka) : ENSORLT00000014121
Pongo
sp. (Orangutan) : ENSPPYT00000004348
Tetraodon
sp. (Tetraodon) : GSTENT00004673001
Tetraodon
sp. (Tetraodon) : GSTENT00031235001
Takifugu
sp. (Fugu) : SINFRUT00000148871
Takifugu
sp. (Fugu) : SINFRUT00000163865
Danio
sp. (Zebrafish) : XM_001337418
Monodelphis
sp. (Opossum) : XM_001369056
Bos
sp. (Cow) : XM_592504
Pan
sp. (Chimpanzee) : XR_025333
HIX0009911
HIT000050489
(
BC007919
)
(PCTP-like protein; PCTP-L; Antigen NY-CO-28; START domain-containing protein 10; StARD10; Serologically defined colon cancer antigen 28; StAR-related lipid transfer protein 10;)
genome : 72,465,774 - 72,504,696 (38,923)
query : 1 - 1,507 (1,507/1,530)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR002913 : START domain
IPR023393 : START-like domain
GO :
0008289 : Molecular Function : lipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 16.5, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000203230 (
NM_006645
)
(PCTP-like protein; PCTP-L; Antigen NY-CO-28; START domain-containing protein 10; StARD10; Serologically defined colon cancer antigen 28; StAR-related lipid transfer protein 10;)
genome : 72,465,774 - 72,504,750 (38,977)
query : 1 - 1,988 (1,988/1,988)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 16.5, nucl 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000642349 (
ENST00000543304
)
(PCTP-like protein; PCTP-L; Antigen NY-CO-28; START domain-containing protein 10; StARD10; Serologically defined colon cancer antigen 28; StAR-related lipid transfer protein 10;)
genome : 72,465,774 - 72,504,702 (38,929)
query : 1 - 1,513 (1,513/1,513)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 16.5, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000636396 (
ENST00000537351
)
(PCTP-like protein.)
genome : 72,465,774 - 72,470,354 (4,581)
query : 1 - 426 (426/426)
6 exons
identity = 0.995
3'(1.000;0.913;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 5, cysk 3, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000129181 (
ENST00000334805
)
(PCTP-like protein; PCTP-L; Antigen NY-CO-28; START domain-containing protein 10; StARD10; Serologically defined colon cancer antigen 28; StAR-related lipid transfer protein 10;)
genome : 72,465,775 - 72,504,726 (38,952)
query : 1 - 1,963 (1,963/1,963)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 16.5, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000020523
(
AK095668
)
(PCTP-like protein; PCTP-L; Antigen NY-CO-28; START domain-containing protein 10; StARD10; Serologically defined colon cancer antigen 28; StAR-related lipid transfer protein 10;)
genome : 72,465,775 - 72,504,666 (38,892)
query : 1 - 1,903 (1,903/1,903)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;0.990;1.000;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR002913 : START domain
IPR023393 : START-like domain
GO :
0008289 : Molecular Function : lipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 16.5, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000093935
(
BC035482
)
(PCTP-like protein; PCTP-L; Antigen NY-CO-28; START domain-containing protein 10; StARD10; Serologically defined colon cancer antigen 28; StAR-related lipid transfer protein 10;)
genome : 72,465,884 - 72,504,688 (38,805)
query : 1 - 1,678 (1,678/1,678)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002913 : START domain
IPR023393 : START-like domain
GO :
0008289 : Molecular Function : lipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15.5, nucl 7.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000637581 (
ENST00000538536
)
(PCTP-like protein; PCTP-L; Antigen NY-CO-28; START domain-containing protein 10; StARD10; Serologically defined colon cancer antigen 28; StAR-related lipid transfer protein 10;)
genome : 72,465,884 - 72,504,688 (38,805)
query : 1 - 1,678 (1,678/1,678)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15.5, nucl 7.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000071623
(
AF151810
)
(PCTP-like protein; PCTP-L; Antigen NY-CO-28; START domain-containing protein 10; StARD10; Serologically defined colon cancer antigen 28; StAR-related lipid transfer protein 10;)
genome : 72,465,884 - 72,504,291 (38,408)
query : 2 - 1,414 (1,413/1,414)
7 exons
identity = 0.994
3'(0.990;1.000;1.000;1.000;1.000;0.997;0.987)5'
coverage = 0.999
InterPro :
IPR002913 : START domain
IPR023393 : START-like domain
GO :
0008289 : Molecular Function : lipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30.5, mito_pero 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000637482 (
ENST00000538437
)
(PCTP-like protein.)
genome : 72,465,888 - 72,492,161 (26,274)
query : 1 - 747 (747/747)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 5, nucl 4.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000642134 (
ENST00000543089
)
(PCTP-like protein.)
genome : 72,465,908 - 72,468,984 (3,077)
query : 1 - 506 (506/506)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, nucl 6.5, cyto_nucl 6.5, E.R._mito 6.5,
cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000634120 (
ENST00000535075
)
(PCTP-like protein.)
genome : 72,465,909 - 72,466,992 (1,084)
query : 1 - 526 (526/526)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto 2.5, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000644127 (
ENST00000545082
)
(PCTP-like protein.)
genome : 72,465,938 - 72,492,887 (26,950)
query : 1 - 1,085 (1,085/1,085)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13.5, nucl 6.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000434121
(
AK315255
)
(PCTP-like protein; PCTP-L; Antigen NY-CO-28; START domain-containing protein 10; StARD10; Serologically defined colon cancer antigen 28; StAR-related lipid transfer protein 10;)
genome : 72,465,942 - 72,504,702 (38,761)
query : 1 - 1,614 (1,614/1,614)
8 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.993;
1.000)5'
coverage = 1.000
InterPro :
IPR002913 : START domain
IPR023393 : START-like domain
GO :
0008289 : Molecular Function : lipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 16.5, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000722355
(
JX424571
)
(PCTP-like protein.)
genome : 72,466,027 - 72,468,837 (2,811)
query : 1 - 240 (240/240)
3 exons
identity = 0.996
3'(1.000;0.981;1.000)5'
coverage = 1.000
InterPro :
IPR002913 : START domain
IPR023393 : START-like domain
GO :
0008289 : Molecular Function : lipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 10, extr 9, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000643812 (
ENST00000544767
)
(PCTP-like protein.)
genome : 72,466,030 - 72,470,426 (4,397)
query : 1 - 509 (509/509)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11.5, extr 10, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000636992 (
ENST00000537947
)
(PCTP-like protein.)
genome : 72,466,061 - 72,492,938 (26,878)
query : 1 - 1,100 (1,100/1,100)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, extr 10, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000635773 (
ENST00000536728
)
(PCTP-like protein.)
genome : 72,466,107 - 72,470,426 (4,320)
query : 1 - 451 (451/451)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 12, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000483820 (
ENST00000400925
)
(PCTP-like protein.)
genome : 72,466,374 - 72,468,927 (2,554)
query : 1 - 541 (541/541)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 10, cyto_nucl 7, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000642034 (
ENST00000542989
)
(PCTP-like protein.)
genome : 72,468,816 - 72,497,012 (28,197)
query : 1 - 839 (839/839)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, extr 11, cyto_nucl 10, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000645359 (
ENST00000546314
)
(PCTP-like protein.)
genome : 72,469,621 - 72,493,404 (23,784)
query : 1 - 620 (620/620)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 6, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000634312 (
ENST00000535267
)
(PCTP-like protein.)
genome : 72,470,239 - 72,492,779 (22,541)
query : 1 - 579 (579/579)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000638183 (
ENST00000539138
)
(PCTP-like protein.)
genome : 72,470,301 - 72,497,011 (26,711)
query : 1 - 511 (511/511)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000634099 (
ENST00000535054
)
(PCTP-like protein.)
genome : 72,470,321 - 72,492,880 (22,560)
query : 1 - 460 (460/460)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 9, nucl 7, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000635335 (
ENST00000536290
)
(PCTP-like protein.)
genome : 72,470,367 - 72,493,574 (23,208)
query : 1 - 438 (438/438)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0021701
HIT000015392
(
AK090525
)
Representative transcript
(Conserved hypothetical protein.)
genome : 72,472,988 - 72,474,965 (1,978)
query : 1 - 1,978 (1,978/1,978)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 12, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021701)
HIX0009911
HIT000635422 (
ENST00000536377
)
(PCTP-like protein.)
genome : 72,491,178 - 72,504,637 (13,460)
query : 1 - 798 (798/798)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 11.5, extr 10, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000429167
(
AK310301
)
(PCTP-like protein.)
genome : 72,491,711 - 72,504,702 (12,992)
query : 1 - 985 (985/985)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR023393 : START-like domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 13.5, cyto 11, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000637054 (
ENST00000538009
)
(PCTP-like protein.)
genome : 72,491,711 - 72,504,702 (12,992)
query : 1 - 985 (985/985)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 13.5, cyto 11, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000639632 (
ENST00000540587
)
(Conserved hypothetical protein.)
genome : 72,492,192 - 72,504,702 (12,511)
query : 1 - 558 (558/558)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0219439
HIT000695081 (
ENST00000583200
)
(Non-protein coding transcript.)
genome : 72,494,575 - 72,494,637 (63)
query : 1 - 63 (63/63)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219439)
HIX0219439
HIT000725904 (
NR_039841
)
(Non-protein coding transcript.)
genome : 72,494,575 - 72,494,637 (63)
query : 1 - 63 (63/63)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219439)
HIX0009911
HIT000002897
(
AK000422
)
(Hypothetical short protein.)
genome : 72,504,673 - 72,505,092 (420)
query : 1 - 420 (420/441)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 9.5, cyto_nucl 8, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009911
HIT000634241 (
ENST00000535196
)
(Hypothetical protein.)
genome : 72,504,669 - 72,505,213 (545)
query : 1 - 545 (545/545)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, cyto_mito 10.1667, extr 9, cyto_nucl 6,
cyto 5, cyto_pero 4.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009911)
HIX0009913
HIT000122721 (
ENST00000321297
)
(Autophagy-related protein 16-2; APG16-like 2; WD repeat-containing protein 80;)
genome : 72,525,353 - 72,540,680 (15,328)
query : 1 - 2,243 (2,243/2,243)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, mito 12, cyto_nucl 11.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000501383
(
BC137489
)
Representative transcript
(Autophagy-related protein 16-2; APG16-like 2; WD repeat-containing protein 80;)
genome : 72,525,353 - 72,540,545 (15,193)
query : 1 - 2,108 (2,108/2,108)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR013923 : Autophagy-related protein 16
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, mito 12, cyto_nucl 11.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171319
Mus
sp. (Mouse) : AK157410
Canis
sp. (Dog) : ENSCAFT00000009108
Equus
sp. (Horse) : ENSECAT00000013704
Monodelphis
sp. (Opossum) : ENSMODT00000009801
Pongo
sp. (Orangutan) : ENSPPYT00000004349
Danio
sp. (Zebrafish) : XM_001345744
Bos
sp. (Cow) : XM_588289
Rattus
sp. (Rat) : XR_008439
Pan
sp. (Chimpanzee) : XR_022546
HIX0009913
HIT000501384
(
BC137490
)
(Autophagy-related protein 16-2; APG16-like 2; WD repeat-containing protein 80;)
genome : 72,525,353 - 72,540,545 (15,193)
query : 1 - 2,108 (2,108/2,108)
18 exons
identity = 1.000
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR013923 : Autophagy-related protein 16
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, mito 12, cyto_nucl 11.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000263349
(
BC069189
)
(FCH and double SH3 domains protein 2.)
genome : 72,525,451 - 72,554,716 (29,266)
query : 13 - 1,623 (1,611/1,637)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.993
InterPro :
IPR013923 : Autophagy-related protein 16
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 7, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000633950 (
ENST00000534905
)
(FCH and double SH3 domains protein 2.)
genome : 72,525,451 - 72,554,719 (29,269)
query : 1 - 1,614 (1,614/1,614)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 7, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000317687 (
NM_033388
)
(Autophagy-related protein 16-2; APG16-like 2; WD repeat-containing protein 80;)
genome : 72,525,451 - 72,540,679 (15,229)
query : 1 - 2,144 (2,144/2,160)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, mito 12, cyto_nucl 11.5, cyto 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000015464
(
AK090597
)
(Autophagy-related protein 16-2.)
genome : 72,525,460 - 72,540,678 (15,219)
query : 1 - 2,258 (2,258/2,258)
18 exons
identity = 0.996
5'(1.000;1.000;1.000;0.985;1.000;1.000;1.000;
1.000;1.000;0.991;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.988)3'
coverage = 1.000
InterPro :
IPR013923 : Autophagy-related protein 16
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000533441 (
ENST00000435507
)
(Autophagy-related protein 16-2.)
genome : 72,525,460 - 72,540,678 (15,219)
query : 1 - 2,254 (2,254/2,254)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000435421
(
BC142718
)
(Autophagy-related protein 16-1; APG16-like 1;)
genome : 72,525,464 - 72,540,679 (15,216)
query : 1 - 3,840 (3,840/3,894)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.999;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 16.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000435524
(
BC146660
)
(Autophagy-related protein 16-1; APG16-like 1;)
genome : 72,525,464 - 72,540,679 (15,216)
query : 1 - 3,840 (3,840/3,894)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.999;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 16.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000537438 (
ENST00000439504
)
(Autophagy-related protein 16-1; APG16-like 1;)
genome : 72,525,464 - 72,540,680 (15,217)
query : 1 - 3,841 (3,841/3,841)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 16.5, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000497894
(
AK303270
)
(Autophagy-related protein 16-2.)
genome : 72,525,470 - 72,534,731 (9,262)
query : 1 - 1,178 (1,178/1,178)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013923 : Autophagy-related protein 16
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000641953 (
ENST00000542908
)
(Autophagy-related protein 16-2.)
genome : 72,525,470 - 72,534,731 (9,262)
query : 1 - 1,178 (1,178/1,178)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000636188 (
ENST00000537143
)
(Autophagy-related protein 16-2.)
genome : 72,525,470 - 72,534,072 (8,603)
query : 1 - 519 (519/519)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000016018
(
AK091151
)
(Autophagy-related protein 16-2.)
genome : 72,525,472 - 72,540,678 (15,207)
query : 1 - 3,731 (3,731/3,731)
17 exons
identity = 0.997
5'(1.000;0.980;1.000;0.993;1.000;0.998;1.000;
0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013923 : Autophagy-related protein 16
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 8, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000643535 (
ENST00000544490
)
(Autophagy-related protein 16-2; APG16-like 2; WD repeat-containing protein 80;)
genome : 72,525,472 - 72,540,678 (15,207)
query : 1 - 3,731 (3,731/3,731)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000639612 (
ENST00000540567
)
(Autophagy-related protein 16-2.)
genome : 72,525,477 - 72,530,060 (4,584)
query : 1 - 1,492 (1,492/1,492)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 10, E.R._mito 10, mito_pero 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000017884
(
AK093017
)
(Autophagy-related protein 16-2; APG16-like 2; WD repeat-containing protein 80;)
genome : 72,525,479 - 72,540,678 (15,200)
query : 2 - 2,116 (2,115/2,116)
18 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.986;1.000;1.000;1.000;
0.993;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR013923 : Autophagy-related protein 16
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, mito 12, cyto_nucl 11.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000339076
(
BC108672
)
(Autophagy-related protein 16-2.)
genome : 72,525,493 - 72,530,056 (4,564)
query : 1 - 1,473 (1,473/1,551)
3 exons
identity = 0.995
5'(1.000;1.000;0.994)3'
coverage = 0.997
InterPro :
IPR013923 : Autophagy-related protein 16
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 11, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000549287 (
ENST00000451353
)
(Conserved hypothetical protein.)
genome : 72,526,932 - 72,528,826 (1,895)
query : 1 - 589 (589/589)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, cyto 9.5, cyto_nucl 8.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000637887 (
ENST00000538842
)
(Autophagy-related protein 16-2.)
genome : 72,527,790 - 72,531,383 (3,594)
query : 1 - 385 (385/385)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10, extr 7, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000094580
(
BC036713
)
(Autophagy-related protein 16-2.)
genome : 72,528,814 - 72,540,663 (11,850)
query : 1 - 1,861 (1,861/1,891)
16 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;0.991;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.984)3'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000007697
(
AK024423
)
(Autophagy-related protein 16-2; APG16-like 2;)
genome : 72,532,933 - 72,540,678 (7,746)
query : 1 - 4,577 (4,577/4,577)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999;1.000;0.990;
1.000)3'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 15, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000636040 (
ENST00000536995
)
(Autophagy-related protein 16-2.)
genome : 72,532,933 - 72,540,678 (7,746)
query : 1 - 4,577 (4,577/4,577)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 15, nucl 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000636257 (
ENST00000537212
)
(Autophagy-related protein 16-2.)
genome : 72,533,234 - 72,534,540 (1,307)
query : 1 - 821 (821/821)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 10, mito_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000641044 (
ENST00000541999
)
(Autophagy-related protein 16-2.)
genome : 72,533,279 - 72,536,437 (3,159)
query : 1 - 537 (537/537)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000634875 (
ENST00000535830
)
(Autophagy-related protein 16-2.)
genome : 72,533,367 - 72,538,317 (4,951)
query : 1 - 963 (963/963)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 14.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000640412 (
ENST00000541367
)
(Autophagy-related protein 16-2.)
genome : 72,533,386 - 72,540,657 (7,272)
query : 1 - 1,575 (1,575/1,575)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000638018 (
ENST00000538973
)
(Autophagy-related protein 16-2.)
genome : 72,533,386 - 72,540,640 (7,255)
query : 1 - 1,456 (1,456/1,456)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000644293 (
ENST00000545248
)
(Autophagy-related protein 16-2.)
genome : 72,533,476 - 72,534,331 (856)
query : 1 - 552 (552/552)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, mito 4, extr 2, cyto 2, E.R._mito 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000639267 (
ENST00000540222
)
(Autophagy-related protein 16-2.)
genome : 72,533,484 - 72,540,643 (7,160)
query : 1 - 1,400 (1,400/1,400)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 17, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000636882 (
ENST00000537837
)
(Autophagy-related protein 16-2.)
genome : 72,533,522 - 72,537,288 (3,767)
query : 1 - 784 (784/784)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10.5, mito 9, cyto_nucl 8.5, extr 7, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000640599 (
ENST00000541554
)
(Autophagy-related protein 16-2.)
genome : 72,533,528 - 72,539,523 (5,996)
query : 1 - 295 (295/295)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 5.5, cyto_nucl 5, cyto 3.5, mito 2,
golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000641526 (
ENST00000542481
)
(Autophagy-related protein 16-2.)
genome : 72,534,940 - 72,537,779 (2,840)
query : 1 - 571 (571/571)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 12, extr 10, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0009913
HIT000027886
(
AL832974
)
(Autophagy-related protein 16-2; APG16-like 2;)
genome : 72,535,240 - 72,540,679 (5,440)
query : 1 - 1,755 (1,755/1,771)
10 exons
identity = 0.999
5'(0.998;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 16.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009913)
HIX0019675
HIT000025034
(
AL133567
)
(FCH and double SH3 domains protein 2.)
genome : 72,547,790 - 72,700,118 (152,329)
query : 1 - 3,860 (3,860/3,901)
15 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, nucl 13, cyto_golg 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019675)
HIX0019675
HIT000024357
(
AL080236
)
(Hypothetical short protein.)
genome : 72,547,790 - 72,549,168 (1,379)
query : 12 - 1,389 (1,378/1,407)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.979
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019675)
HIX0019675
HIT000205118 (
NM_014824
)
(FCH and double SH3 domains protein 2; Carom; SH3 multiple domains protein 3;)
genome : 72,547,790 - 72,853,143 (305,354)
query : 1 - 4,490 (4,490/4,507)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019675)
HIX0019675
HIT000118964 (
ENST00000311172
)
(FCH and double SH3 domains protein 2.)
genome : 72,547,790 - 72,853,091 (305,302)
query : 1 - 4,340 (4,340/4,340)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14.5, nucl 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019675)
HIX0019675
HIT000000494
(
AB018312
)
(FCH and double SH3 domains protein 2.)
genome : 72,547,791 - 72,853,091 (305,301)
query : 1 - 4,341 (4,341/4,341)
19 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14.5, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019675)
HIX0019675
HIT000507346 (
ENST00000409314
)
(FCH and double SH3 domains protein 2; Carom; SH3 multiple domains protein 3;)
genome : 72,547,791 - 72,853,091 (305,301)
query : 1 - 4,509 (4,509/4,509)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019675)
HIX0019675
HIT000089381
(
BC017751
)
(FCH and double SH3 domains protein 2.)
genome : 72,547,805 - 72,578,988 (31,184)
query : 1 - 3,025 (3,025/3,039)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR013315 : Spectrin alpha chain, SH3 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 15, cyto 5, extr 2, E.R. 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019675)
HIX0019675
HIT000048254
(
AK128381
)
(Conserved hypothetical protein.)
genome : 72,548,210 - 72,551,552 (3,343)
query : 1 - 3,342 (3,342/3,342)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.5, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019675)
HIX0019675
HIT000507450 (
ENST00000409418
)
(FCH and double SH3 domains protein 2; Carom; SH3 multiple domains protein 3;)
genome : 72,549,289 - 72,853,306 (304,018)
query : 1 - 3,154 (3,154/3,154)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019675)
HIX0019675
HIT000578400 (
ENST00000474099
)
(Conserved hypothetical protein.)
genome : 72,549,340 - 72,554,785 (5,446)
query : 1 - 471 (471/471)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, extr 11, cyto 10.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019675)
HIX0019675
HIT000507296 (
ENST00000409263
)
(FCH and double SH3 domains protein 2.)
genome : 72,549,444 - 72,554,558 (5,115)
query : 1 - 932 (932/932)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 11.5, extr 8, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019675)
HIX0019675
HIT000492552
(
AK297928
)
Representative transcript
(FCH and double SH3 domains protein 2; Carom; SH3 multiple domains protein 3;)
genome : 72,549,675 - 72,853,027 (303,353)
query : 1 - 2,489 (2,489/2,489)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.992)5'
coverage = 1.000
InterPro :
IPR001060 : FCH domain
IPR001452 : SH3 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019675)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC060647
Gallus
sp. (Chicken) : CR387294
Bos
sp. (Cow) : ENSBTAT00000039766
Monodelphis
sp. (Opossum) : ENSMODT00000009769
Oryzias
sp. (Medaka) : ENSORLT00000012890
Pongo
sp. (Orangutan) : ENSPPYT00000004350
Tetraodon
sp. (Tetraodon) : GSTENT00005747001
Takifugu
sp. (Fugu) : SINFRUT00000181892
Rattus
sp. (Rat) : XM_001067481
Macaca
sp. (Macaque) : XM_001110150
Equus
sp. (Horse) : XM_001496305
Pan
sp. (Chimpanzee) : XM_508628
Canis
sp. (Dog) : XM_542322
Danio
sp. (Zebrafish) : XM_678558
HIX0019675
HIT000491000
(
AK296376
)
(FCH and double SH3 domains protein 2.)
genome : 72,549,807 - 72,852,958 (303,152)
query : 1 - 2,215 (2,215/2,215)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, nucl 13, cyto_golg 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019675)
HIX0019675
HIT000556578 (
ENST00000458644
)
(FCH and double SH3 domains protein 2.)
genome : 72,549,807 - 72,852,958 (303,152)
query : 1 - 2,215 (2,215/2,215)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, nucl 13, cyto_golg 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019675)
HIX0019675
HIT000034915
(
BC010394
)
(FCH and double SH3 domains protein 2.)
genome : 72,553,999 - 72,851,106 (297,108)
query : 4 - 1,870 (1,867/1,899)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.998
InterPro :
IPR001060 : FCH domain
IPR001452 : SH3 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12.8333, nucl 8.5, cyto_golg 8.5,
mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019675)
HIX0019675
HIT000507878 (
ENST00000409853
)
(FCH and double SH3 domains protein 2.)
genome : 72,553,999 - 72,851,106 (297,108)
query : 1 - 1,867 (1,867/1,867)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12.8333, nucl 8.5, cyto_golg 8.5,
mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019675)
HIX0019675
HIT000529977 (
ENST00000432043
)
(FCH and double SH3 domains protein 2.)
genome : 72,554,273 - 72,598,620 (44,348)
query : 1 - 578 (578/578)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13.5, nucl 8.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019675)
HIX0021883
HIT000019150
(
AK094295
)
Representative transcript
(Conserved hypothetical protein.)
genome : 72,563,246 - 72,566,340 (3,095)
query : 1 - 2,569 (2,569/2,569)
2 exons
identity = 0.983
3'(0.984;0.973)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021883)
HIX0171518
HIT000537763 (
ENST00000439829
)
(Ribosomal protein L15e family protein.)
genome : 72,651,543 - 72,652,157 (615)
query : 1 - 615 (615/615)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 12, cyto_nucl 5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171518)
HIX0018359
HIT000022077
(
AK097222
)
Representative transcript
(Hypothetical protein.)
genome : 72,665,269 - 72,667,509 (2,241)
query : 1 - 2,241 (2,241/2,241)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20.5, extr_plas 14, plas 6.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018359)
HIX0019675
HIT000642689 (
ENST00000543644
)
(FCH and double SH3 domains protein 2.)
genome : 72,694,810 - 72,700,057 (5,248)
query : 1 - 321 (321/321)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 12, mito 7, extr 2, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019675)
HIX0019675
HIT000520309 (
ENST00000422375
)
(FCH and double SH3 domains protein 2.)
genome : 72,700,046 - 72,852,389 (152,344)
query : 1 - 587 (587/587)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13.5, nucl 6.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019675)
HIX0210481
HIT000640299 (
ENST00000541254
)
(Conserved hypothetical protein.)
genome : 72,887,739 - 72,892,741 (5,003)
query : 1 - 618 (618/618)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 8, cyto 8, cyto_nucl 8, mito 7, nucl 4,
extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210481)
HIX0219492
HIT000483868 (
ENST00000400985
)
(Conserved hypothetical protein.)
genome : 72,926,043 - 72,926,958 (916)
query : 1 - 262 (262/262)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 2.5, cyto_nucl 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219492)
HIX0009916
HIT000199453 (
NM_002564
)
(P2Y purinoceptor 2; P2Y2; ATP receptor; P2U purinoceptor 1; P2U1; Purinergic receptor;)
genome : 72,929,343 - 72,953,472 (24,130)
query : 1 - 8,602 (8,602/8,602)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009916)
HIX0009916
HIT000215384 (
NM_176072
)
(P2Y purinoceptor 2; P2Y2; ATP receptor; P2U purinoceptor 1; P2U1; Purinergic receptor;)
genome : 72,929,343 - 72,953,472 (24,130)
query : 1 - 8,736 (8,736/8,736)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009916)
HIX0009916
HIT000477041 (
ENST00000393597
)
(P2Y purinoceptor 2; P2Y2; ATP receptor; P2U purinoceptor 1; P2U1; Purinergic receptor;)
genome : 72,929,343 - 72,946,977 (17,635)
query : 1 - 2,107 (2,107/2,107)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009916)
HIX0009916
HIT000035661
(
BC012104
)
(P2Y purinoceptor 2; P2Y2; ATP receptor; P2U purinoceptor 1; P2U1; Purinergic receptor;)
genome : 72,929,344 - 72,947,394 (18,051)
query : 1 - 2,657 (2,657/2,681)
3 exons
identity = 0.998
5'(0.993;0.995;0.998)3'
coverage = 1.000
InterPro :
IPR000356 : P2Y2 purinoceptor
GO :
0007200 : Biological Process : phospholipase C-activating G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
0042312 : Biological Process : regulation of vasodilation
0045028 : Molecular Function : G-protein coupled purinergic nucleotide receptor activity
0070257 : Biological Process : positive regulation of mucus secretion
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009916)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK005013
Rattus
sp. (Rat) : BC061754
Equus
sp. (Horse) : ENSECAT00000010867
Pongo
sp. (Orangutan) : ENSPPYT00000004352
Canis
sp. (Dog) : EU546105
Macaca
sp. (Macaque) : XM_001115229
Monodelphis
sp. (Opossum) : XM_001368834
Gallus
sp. (Chicken) : XM_425667
Pan
sp. (Chimpanzee) : XM_522101
HIX0009916
HIT000118951 (
ENST00000311131
)
(P2Y purinoceptor 2; P2Y2; ATP receptor; P2U purinoceptor 1; P2U1; Purinergic receptor;)
genome : 72,929,344 - 72,947,397 (18,054)
query : 1 - 2,660 (2,660/2,660)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009916)
HIX0009916
HIT000217652
(
U07225
)
(P2Y purinoceptor 2; P2Y2; ATP receptor; P2U purinoceptor 1; P2U1; Purinergic receptor;)
genome : 72,929,430 - 72,946,977 (17,548)
query : 1 - 2,017 (2,017/2,025)
3 exons
identity = 0.995
5'(0.917;1.000;0.997)3'
coverage = 0.996
InterPro :
IPR000356 : P2Y2 purinoceptor
GO :
0007200 : Biological Process : phospholipase C-activating G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
0042312 : Biological Process : regulation of vasodilation
0045028 : Molecular Function : G-protein coupled purinergic nucleotide receptor activity
0070257 : Biological Process : positive regulation of mucus secretion
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009916)
HIX0009916
HIT000215383 (
NM_176071
)
(P2Y purinoceptor 2; P2Y2; ATP receptor; P2U purinoceptor 1; P2U1; Purinergic receptor;)
genome : 72,929,502 - 72,953,472 (23,971)
query : 1 - 8,667 (8,667/8,667)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009916)
HIX0009916
HIT000040457
(
BC028135
)
Representative transcript
(P2Y purinoceptor 2; P2Y2; ATP receptor; P2U purinoceptor 1; P2U1; Purinergic receptor;)
genome : 72,929,502 - 72,946,979 (17,478)
query : 1 - 2,174 (2,174/2,257)
3 exons
identity = 1.000
5'(1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000356 : P2Y2 purinoceptor
GO :
0007200 : Biological Process : phospholipase C-activating G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
0042312 : Biological Process : regulation of vasodilation
0045028 : Molecular Function : G-protein coupled purinergic nucleotide receptor activity
0070257 : Biological Process : positive regulation of mucus secretion
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009916)
HIX0009916
HIT000477040 (
ENST00000393596
)
(P2Y purinoceptor 2; P2Y2; ATP receptor; P2U purinoceptor 1; P2U1; Purinergic receptor;)
genome : 72,929,502 - 72,946,979 (17,478)
query : 1 - 2,174 (2,174/2,174)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009916)
HIX0009916
HIT000432808
(
AK313942
)
(P2Y purinoceptor 2; P2Y2; ATP receptor; P2U purinoceptor 1; P2U1; Purinergic receptor;)
genome : 72,929,607 - 72,946,338 (16,732)
query : 1 - 1,429 (1,429/1,429)
3 exons
identity = 0.997
5'(1.000;0.995;0.996)3'
coverage = 1.000
InterPro :
IPR000356 : P2Y2 purinoceptor
GO :
0007200 : Biological Process : phospholipase C-activating G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
0042312 : Biological Process : regulation of vasodilation
0045028 : Molecular Function : G-protein coupled purinergic nucleotide receptor activity
0070257 : Biological Process : positive regulation of mucus secretion
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009916)
HIX0009916
HIT000084685
(
AY136753
)
(P2Y purinoceptor 2; P2Y2; ATP receptor; P2U purinoceptor 1; P2U1; Purinergic receptor;)
genome : 72,945,205 - 72,946,338 (1,134)
query : 1 - 1,134 (1,134/1,134)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
InterPro :
IPR000356 : P2Y2 purinoceptor
GO :
0007200 : Biological Process : phospholipase C-activating G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
0042312 : Biological Process : regulation of vasodilation
0045028 : Molecular Function : G-protein coupled purinergic nucleotide receptor activity
0070257 : Biological Process : positive regulation of mucus secretion
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009916)
HIX0009916
HIT000558733
(
FJ599700
)
(P2Y purinoceptor 2; P2Y2; ATP receptor; P2U purinoceptor 1; P2U1; Purinergic receptor;)
genome : 72,945,750 - 72,946,304 (555)
query : 1 - 554 (554/554)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 1.000
InterPro :
IPR000356 : P2Y2 purinoceptor
GO :
0007200 : Biological Process : phospholipase C-activating G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
0042312 : Biological Process : regulation of vasodilation
0045028 : Molecular Function : G-protein coupled purinergic nucleotide receptor activity
0070257 : Biological Process : positive regulation of mucus secretion
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, extr_plas 16.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009916)
HIX0009916
HIT000558732
(
FJ599699
)
(P2Y purinoceptor 2; P2Y2; ATP receptor; P2U purinoceptor 1; P2U1; Purinergic receptor;)
genome : 72,945,756 - 72,946,306 (551)
query : 3 - 553 (551/557)
1 exon
identity = 0.989
5'(0.989)3'
coverage = 0.989
InterPro :
IPR000356 : P2Y2 purinoceptor
GO :
0007200 : Biological Process : phospholipase C-activating G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
0042312 : Biological Process : regulation of vasodilation
0045028 : Molecular Function : G-protein coupled purinergic nucleotide receptor activity
0070257 : Biological Process : positive regulation of mucus secretion
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, extr_plas 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009916)
HIX0036297
HIT000678514 (
ENST00000565433
)
(Hypothetical protein.)
genome : 72,950,020 - 72,953,380 (3,361)
query : 1 - 3,361 (3,361/3,361)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 10, nucl 3, mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036297)
HIX0036297
HIT000019582
(
AK094727
)
Representative transcript
(Hypothetical protein.)
genome : 72,950,020 - 72,952,262 (2,243)
query : 1 - 2,243 (2,243/2,243)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 9, extr 6, cyto_pero 6, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036297)
HIX0009916
HIT000055599
(
BX641058
)
(Conserved hypothetical protein.)
genome : 72,951,137 - 72,953,380 (2,244)
query : 1 - 2,244 (2,244/2,262)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 10.5, cyto_nucl 7.83333, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009916)
HIX0210500
HIT000642988 (
ENST00000543943
)
(Conserved hypothetical protein.)
genome : 72,959,824 - 72,960,912 (1,089)
query : 1 - 764 (764/764)
2 exons
identity = 0.997
5'(1.000;0.996)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, cyto 8.5, cyto_nucl 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210500)
HIX0009915
HIT000215399 (
NM_176796
)
(P2Y6 purinoceptor family protein.)
genome : 72,975,550 - 73,009,670 (34,121)
query : 1 - 2,532 (2,532/2,532)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000215400 (
NM_176797
)
(P2Y6 purinoceptor family protein.)
genome : 72,975,550 - 73,009,670 (34,121)
query : 1 - 2,372 (2,372/2,372)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000725396 (
NM_001277205
)
(P2Y6 purinoceptor family protein.)
genome : 72,975,550 - 73,009,670 (34,121)
query : 1 - 2,499 (2,499/2,499)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000639387 (
ENST00000540342
)
(P2Y6 purinoceptor family protein.)
genome : 72,975,550 - 73,008,835 (33,286)
query : 1 - 1,611 (1,611/1,611)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000641137 (
ENST00000542092
)
(P2Y6 purinoceptor family protein.)
genome : 72,975,555 - 73,008,850 (33,296)
query : 1 - 1,674 (1,674/1,674)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000307844 (
ENST00000349767
)
(P2Y6 purinoceptor family protein.)
genome : 72,975,562 - 73,008,850 (33,289)
query : 1 - 1,700 (1,700/1,700)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000061922
(
AF007891
)
(P2Y purinoceptor 6; P2Y6;)
genome : 72,975,584 - 73,008,847 (33,264)
query : 1 - 1,515 (1,515/1,539)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001973 : P2Y6 purinoceptor
GO :
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
0045028 : Molecular Function : G-protein coupled purinergic nucleotide receptor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000477036 (
ENST00000393592
)
(P2Y6 purinoceptor family protein.)
genome : 72,975,584 - 73,008,847 (33,264)
query : 1 - 1,515 (1,515/1,515)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000725398 (
NM_001277207
)
(P2Y6 purinoceptor family protein.)
genome : 72,975,597 - 73,009,670 (34,074)
query : 1 - 2,399 (2,399/2,399)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000643482 (
ENST00000544437
)
(P2Y6 purinoceptor family protein.)
genome : 72,976,275 - 73,007,948 (31,674)
query : 1 - 741 (741/741)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, extr 5, mito 5, plas 4, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000725397 (
NM_001277206
)
(P2Y6 purinoceptor family protein.)
genome : 72,976,281 - 73,009,670 (33,390)
query : 1 - 2,457 (2,457/2,457)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000215401 (
NM_176798
)
(P2Y6 purinoceptor family protein.)
genome : 72,980,939 - 73,009,670 (28,732)
query : 1 - 2,649 (2,649/2,649)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000061923
(
AF007892
)
Representative transcript
(P2Y purinoceptor 6; P2Y6;)
genome : 72,980,939 - 73,008,850 (27,912)
query : 1 - 1,829 (1,829/1,832)
4 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR001973 : P2Y6 purinoceptor
GO :
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
0045028 : Molecular Function : G-protein coupled purinergic nucleotide receptor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000477035 (
ENST00000393591
)
(P2Y6 purinoceptor family protein.)
genome : 72,980,939 - 73,008,850 (27,912)
query : 1 - 1,829 (1,829/1,829)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000061924
(
AF007893
)
(P2Y purinoceptor 6; P2Y6;)
genome : 72,982,567 - 73,008,849 (26,283)
query : 1 - 2,352 (2,352/2,352)
3 exons
identity = 1.000
5'(1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001973 : P2Y6 purinoceptor
GO :
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
0045028 : Molecular Function : G-protein coupled purinergic nucleotide receptor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000639169 (
ENST00000540124
)
(P2Y6 purinoceptor family protein.)
genome : 72,982,567 - 73,008,849 (26,283)
query : 1 - 2,351 (2,351/2,351)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000725395 (
NM_001277204
)
(P2Y6 purinoceptor family protein.)
genome : 72,983,187 - 73,009,670 (26,484)
query : 1 - 2,552 (2,552/2,552)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000725399 (
NM_001277208
)
(P2Y6 purinoceptor family protein.)
genome : 72,983,187 - 73,009,670 (26,484)
query : 1 - 2,466 (2,466/2,466)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000034330
(
BC009391
)
(P2Y purinoceptor 6; P2Y6;)
genome : 72,983,247 - 73,009,647 (26,401)
query : 1 - 2,383 (2,383/2,400)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001973 : P2Y6 purinoceptor
GO :
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
0045028 : Molecular Function : G-protein coupled purinergic nucleotide receptor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000477034 (
ENST00000393590
)
(P2Y6 purinoceptor family protein.)
genome : 72,983,247 - 73,009,662 (26,416)
query : 1 - 2,398 (2,398/2,398)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000029743
(
BC000571
)
(P2Y purinoceptor 6; P2Y6;)
genome : 72,983,306 - 73,008,850 (25,545)
query : 1 - 1,527 (1,527/1,547)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001973 : P2Y6 purinoceptor
GO :
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
0045028 : Molecular Function : G-protein coupled purinergic nucleotide receptor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000074250
(
AF218005
)
(P2Y purinoceptor 6; P2Y6;)
genome : 72,983,330 - 73,008,850 (25,521)
query : 1 - 1,588 (1,588/1,647)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001973 : P2Y6 purinoceptor
GO :
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
0045028 : Molecular Function : G-protein coupled purinergic nucleotide receptor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000324968
(
X97058
)
(P2Y6 purinoceptor family protein.)
genome : 72,983,356 - 73,008,850 (25,495)
query : 1 - 1,563 (1,563/1,571)
3 exons
identity = 0.999
5'(0.994;1.000;1.000)3'
coverage = 0.995
InterPro :
IPR001973 : P2Y6 purinoceptor
GO :
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
0045028 : Molecular Function : G-protein coupled purinergic nucleotide receptor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000430395
(
AK311529
)
(Hypothetical short protein.)
genome : 72,983,393 - 72,984,266 (874)
query : 1 - 874 (874/874)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, extr 8, cyto 2.5, cyto_nucl 2.5, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000220259
(
U52464
)
(P2Y6 purinoceptor family protein.)
genome : 72,983,433 - 73,008,850 (25,418)
query : 6 - 1,490 (1,485/1,507)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 0.985
InterPro :
IPR001973 : P2Y6 purinoceptor
GO :
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
0045028 : Molecular Function : G-protein coupled purinergic nucleotide receptor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000635270 (
ENST00000536225
)
(P2Y6 purinoceptor family protein.)
genome : 72,983,465 - 73,008,214 (24,750)
query : 1 - 335 (335/335)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, extr 10, mito 1.5, cyto_mito 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000634976 (
ENST00000535931
)
(P2Y6 purinoceptor family protein.)
genome : 73,000,452 - 73,008,299 (7,848)
query : 1 - 800 (800/800)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000637373 (
ENST00000538328
)
(P2Y6 purinoceptor family protein.)
genome : 73,003,827 - 73,008,815 (4,989)
query : 1 - 1,425 (1,425/1,425)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000080857
(
AF498920
)
(P2Y6 purinoceptor family protein.)
genome : 73,007,564 - 73,008,550 (987)
query : 1 - 987 (987/987)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR001973 : P2Y6 purinoceptor
GO :
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
0045028 : Molecular Function : G-protein coupled purinergic nucleotide receptor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0009915
HIT000099691
(
BT006771
)
(P2Y6 purinoceptor family protein.)
genome : 73,007,564 - 73,008,548 (985)
query : 1 - 985 (985/987)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.998
InterPro :
IPR001973 : P2Y6 purinoceptor
GO :
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
0045028 : Molecular Function : G-protein coupled purinergic nucleotide receptor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009915)
HIX0171270
HIT000645369 (
ENST00000546324
)
(Conserved hypothetical protein.)
genome : 73,018,280 - 73,020,406 (2,127)
query : 1 - 1,695 (1,695/1,695)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 19, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171270)
HIX0171270
HIT000494719
(
AK300095
)
Representative transcript
(Conserved hypothetical protein.)
genome : 73,018,556 - 73,020,406 (1,851)
query : 1 - 1,419 (1,419/1,419)
3 exons
identity = 0.999
3'(1.000;0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 19, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171270)
HIX0219269
HIT000099103
(
BC050031
)
(Conserved hypothetical protein.)
genome : 73,019,329 - 73,020,007 (679)
query : 26 - 704 (679/704)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.964
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 13.5, extr 4, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219269)
HIX0219269
HIT000081535
(
AK074500
)
Representative transcript
(Conserved hypothetical protein.)
genome : 73,019,494 - 73,020,887 (1,394)
query : 1 - 1,394 (1,394/1,394)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 14.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219269)
HIX0219413
HIT000643564 (
ENST00000544519
)
(Dbl homology (DH) domain containing protein.)
genome : 73,022,610 - 73,058,240 (35,631)
query : 1 - 579 (579/579)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 11, nucl 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219413)
HIX0219413
HIT000635215 (
ENST00000536170
)
(Dbl homology (DH) domain containing protein.)
genome : 73,054,041 - 73,064,307 (10,267)
query : 1 - 793 (793/793)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto_nucl 8.5, nucl 8, cyto 7, mito 5,
extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219413)
HIX0219557
HIT000636243 (
ENST00000537198
)
(Conserved hypothetical protein.)
genome : 73,067,522 - 73,068,137 (616)
query : 1 - 351 (351/351)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 3.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219557)
HIX0219592
HIT000694446 (
ENST00000582555
)
(Non-protein coding transcript.)
genome : 73,068,180 - 73,068,286 (107)
query : 1 - 107 (107/107)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219592)
HIX0219555
HIT000635526 (
ENST00000536481
)
(Conserved hypothetical protein.)
genome : 73,075,259 - 73,076,167 (909)
query : 1 - 697 (697/697)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219555)
HIX0219561
HIT000642575 (
ENST00000543530
)
(Conserved hypothetical protein.)
genome : 73,076,270 - 73,078,988 (2,719)
query : 1 - 970 (970/970)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, mito 8, cyto_nucl 7.16667, nucl 6.5,
cyto 6.5, cyto_pero 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219561)
HIX0009918
HIT000102374 (
ENST00000064780
)
(Tumor necrosis factor receptor superfamily member 19L; Receptor expressed in lymphoid tissues; Precursor;)
genome : 73,087,309 - 73,108,517 (21,209)
query : 1 - 3,535 (3,535/3,535)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 9, extr 7, lyso 7, plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009918)
HIX0009918
HIT000213513 (
NM_152222
)
(Tumor necrosis factor receptor superfamily member 19L; Receptor expressed in lymphoid tissues; Precursor;)
genome : 73,087,405 - 73,108,519 (21,115)
query : 1 - 3,441 (3,441/3,458)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 9, extr 7, lyso 7, plas 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009918)
HIX0009918
HIT000011171
(
AK027899
)
(Tumor necrosis factor receptor superfamily member 19L; Receptor expressed in lymphoid tissues; Precursor;)
genome : 73,087,405 - 73,107,684 (20,280)
query : 1 - 2,606 (2,606/2,606)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.996;1.000;
1.000;0.996;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001368 : TNFR/NGFR cysteine-rich region
IPR022248 : TNF receptor family, RELT
IPR022333 : Tumour necrosis factor receptor 19-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 9, extr 7, lyso 7, plas 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009918)
HIX0009918
HIT000644732 (
ENST00000545687
)
(Tumor necrosis factor receptor superfamily member 19L; Receptor expressed in lymphoid tissues; Precursor;)
genome : 73,087,445 - 73,101,968 (14,524)
query : 1 - 571 (571/586)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.974
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, cyto 3, mito 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009918)
HIX0009918
HIT000099422
(
BC051810
)
(Tumor necrosis factor receptor superfamily member 19L; Receptor expressed in lymphoid tissues; Precursor;)
genome : 73,087,453 - 73,108,047 (20,595)
query : 1 - 2,920 (2,920/2,972)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001368 : TNFR/NGFR cysteine-rich region
IPR022248 : TNF receptor family, RELT
IPR022333 : Tumour necrosis factor receptor 19-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 9, extr 7, lyso 7, plas 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009918)
HIX0009918
HIT000643120 (
ENST00000544075
)
(Tumor necrosis factor receptor superfamily member 19L; Receptor expressed in lymphoid tissues; Precursor;)
genome : 73,087,453 - 73,105,539 (18,087)
query : 1 - 744 (744/744)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, cyto 3, mito 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009918)
HIX0009918
HIT000037917
(
BC017279
)
Representative transcript
(Tumor necrosis factor receptor superfamily member 19L; Receptor expressed in lymphoid tissues; Precursor;)
genome : 73,087,480 - 73,107,685 (20,206)
query : 1 - 2,532 (2,532/2,582)
11 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.990;0.998)3'
coverage = 1.000
InterPro :
IPR001368 : TNFR/NGFR cysteine-rich region
IPR022248 : TNF receptor family, RELT
IPR022333 : Tumour necrosis factor receptor 19-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 9, extr 7, lyso 7, plas 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009918)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK088621
Danio
sp. (Zebrafish) : BC066389
Bos
sp. (Cow) : BT025408
Oryzias
sp. (Medaka) : ENSORLT00000012919
Pongo
sp. (Orangutan) : ENSPPYT00000004354
Rattus
sp. (Rat) : ENSRNOT00000038408
Takifugu
sp. (Fugu) : SINFRUT00000180324
Macaca
sp. (Macaque) : XM_001110447
Pan
sp. (Chimpanzee) : XM_001174786
Monodelphis
sp. (Opossum) : XM_001368537
Equus
sp. (Horse) : XM_001917453
Canis
sp. (Dog) : XM_542318
HIX0009918
HIT000210958 (
NM_032871
)
(Tumor necrosis factor receptor superfamily member 19L; Receptor expressed in lymphoid tissues; Precursor;)
genome : 73,087,713 - 73,108,519 (20,807)
query : 1 - 3,503 (3,503/3,520)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 9, extr 7, lyso 7, plas 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009918)
HIX0009918
HIT000077326
(
AF319553
)
(Tumor necrosis factor receptor superfamily member 19L; Receptor expressed in lymphoid tissues; Precursor;)
genome : 73,087,713 - 73,107,685 (19,973)
query : 1 - 2,688 (2,688/2,732)
11 exons
identity = 0.989
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.975)3'
coverage = 1.000
InterPro :
IPR001368 : TNFR/NGFR cysteine-rich region
IPR022248 : TNF receptor family, RELT
IPR022333 : Tumour necrosis factor receptor 19-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 9, extr 7, lyso 7, plas 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009918)
HIX0009918
HIT000477025 (
ENST00000393580
)
(Tumor necrosis factor receptor superfamily member 19L; Receptor expressed in lymphoid tissues; Precursor;)
genome : 73,087,713 - 73,107,685 (19,973)
query : 1 - 2,669 (2,669/2,669)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 9, extr 7, lyso 7, plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009918)
HIX0009918
HIT000428969
(
AK310103
)
(Tumor necrosis factor receptor superfamily member 19L; Receptor expressed in lymphoid tissues; Precursor;)
genome : 73,102,188 - 73,106,737 (4,550)
query : 19 - 1,527 (1,509/1,527)
7 exons
identity = 0.999
5'(1.000;1.000;0.997;1.000;1.000;1.000;1.000)3'
coverage = 0.988
InterPro :
IPR022333 : Tumour necrosis factor receptor 19-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 10, mito 9, cyto 5.5,
mito_pero 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009918)
HIX0009918
HIT000014908
(
AK074128
)
(Tumor necrosis factor receptor superfamily member 19L; Receptor expressed in lymphoid tissues; Precursor;)
genome : 73,103,027 - 73,107,689 (4,663)
query : 1 - 4,346 (4,346/4,346)
3 exons
identity = 1.000
5'(1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR022248 : TNF receptor family, RELT
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18, nucl 6, plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009918)
HIX0009918
HIT000644931 (
ENST00000545886
)
(Tumor necrosis factor receptor superfamily member 19L; Receptor expressed in lymphoid tissues; Precursor;)
genome : 73,103,027 - 73,107,689 (4,663)
query : 1 - 4,346 (4,346/4,346)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18, nucl 6, plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009918)
HIX0009918
HIT000638179 (
ENST00000539134
)
(Tumor necrosis factor receptor superfamily member 19L; Receptor expressed in lymphoid tissues; Precursor;)
genome : 73,104,289 - 73,108,519 (4,231)
query : 1 - 3,244 (3,244/3,244)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 10, mito 9, cyto 5.5,
mito_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009918)
HIX0009918
HIT000013650
(
AK057036
)
(Tumor necrosis factor receptor superfamily member 19L; Receptor expressed in lymphoid tissues; Precursor;)
genome : 73,104,289 - 73,107,685 (3,397)
query : 1 - 2,411 (2,411/2,411)
5 exons
identity = 0.997
5'(0.997;1.000;1.000;0.990;0.997)3'
coverage = 1.000
InterPro :
IPR022333 : Tumour necrosis factor receptor 19-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 12.5, nucl 11.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009918)
HIX0009918
HIT000636816 (
ENST00000537771
)
(Tumor necrosis factor receptor superfamily member 19L; Receptor expressed in lymphoid tissues; Precursor;)
genome : 73,104,729 - 73,106,166 (1,438)
query : 1 - 768 (768/768)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 10.1667, cyto 6.5, extr 6,
cyto_pero 5.83333, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009918)
HIX0009918
HIT000086091
(
BC001812
)
(Tumor necrosis factor receptor superfamily member 19L; Receptor expressed in lymphoid tissues; Precursor;)
genome : 73,106,226 - 73,108,519 (2,294)
query : 1 - 2,136 (2,136/2,153)
2 exons
identity = 0.998
5'(0.990;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009918)
HIX0210505
HIT000643719 (
ENST00000544674
)
(Hypothetical short protein.)
genome : 73,106,604 - 73,107,481 (878)
query : 1 - 752 (752/752)
2 exons
identity = 0.992
3'(1.000;0.989)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 12.5, cyto 9.5, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210505)
HIX0009919
HIT000102373 (
ENST00000064778
)
(Protein FAM168A; Tongue cancer chemotherapy resistance-associated protein 1;)
genome : 73,111,532 - 73,309,234 (197,703)
query : 1 - 7,296 (7,296/7,296)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 13, cyto 13, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009919)
HIX0009919
HIT000042413
(
D87470
)
Representative transcript
(Protein FAM168A; Tongue cancer chemotherapy resistance-associated protein 1;)
genome : 73,111,845 - 73,309,091 (197,247)
query : 1 - 6,837 (6,837/6,837)
9 exons
identity = 0.998
3'(0.998;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR029247 : FAM168A/MANI
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 13, cyto 13, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009919)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC079886
Danio
sp. (Zebrafish) : BC122116
Gallus
sp. (Chicken) : BX931673
Monodelphis
sp. (Opossum) : ENSMODT00000034164
Oryzias
sp. (Medaka) : ENSORLT00000013011
Pongo
sp. (Orangutan) : ENSPPYT00000004355
Tetraodon
sp. (Tetraodon) : GSTENT00019493001
Rattus
sp. (Rat) : XM_001067261
Equus
sp. (Horse) : XM_001498788
Pan
sp. (Chimpanzee) : XM_508631
Canis
sp. (Dog) : XM_846709
Macaca
sp. (Macaque) : XR_013834
HIX0009919
HIT000088514
(
BC014932
)
(Hypothetical protein.)
genome : 73,112,127 - 73,115,085 (2,959)
query : 1 - 2,959 (2,959/2,974)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 10.6667, mito 10.5, cyto 9.5, cyto_nucl 9.5,
cyto_pero 7.33333, E.R._mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009919)
HIX0209636
HIT000635900 (
ENST00000536855
)
(Hypothetical short protein.)
genome : 73,116,342 - 73,121,727 (5,386)
query : 1 - 285 (285/285)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 7, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209636)
HIX0209636
HIT000641643 (
ENST00000542598
)
(Hypothetical short protein.)
genome : 73,116,342 - 73,121,717 (5,376)
query : 1 - 334 (334/334)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209636)
HIX0009919
HIT000053783
(
BC052341
)
(Protein FAM168A; Tongue cancer chemotherapy resistance-associated protein 1;)
genome : 73,117,028 - 73,309,228 (192,201)
query : 1 - 1,767 (1,767/1,834)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR029247 : FAM168A/MANI
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, cyto 8, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009919)
HIX0009919
HIT000395422
(
EF363480
)
(Protein FAM168A; Tongue cancer chemotherapy resistance-associated protein 1;)
genome : 73,117,028 - 73,309,228 (192,201)
query : 1 - 1,767 (1,767/1,834)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR029247 : FAM168A/MANI
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, cyto 8, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009919)
HIX0009919
HIT000398364 (
NM_015159
)
(Protein FAM168A; Tongue cancer chemotherapy resistance-associated protein 1;)
genome : 73,117,028 - 73,309,228 (192,201)
query : 1 - 1,767 (1,767/1,834)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, cyto 8, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009919)
HIX0009919
HIT000395342
(
EF197985
)
(Protein FAM168A; Tongue cancer chemotherapy resistance-associated protein 1;)
genome : 73,117,028 - 73,309,143 (192,116)
query : 1 - 1,364 (1,364/1,386)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR029247 : FAM168A/MANI
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 13, cyto 7, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009919)
HIX0009919
HIT000310456 (
ENST00000356467
)
(Protein FAM168A; Tongue cancer chemotherapy resistance-associated protein 1;)
genome : 73,117,028 - 73,309,228 (192,201)
query : 1 - 1,767 (1,767/1,767)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, cyto 8, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009919)
HIX0009919
HIT000548380 (
ENST00000450446
)
(Protein FAM168A; Tongue cancer chemotherapy resistance-associated protein 1;)
genome : 73,117,028 - 73,309,143 (192,116)
query : 1 - 1,364 (1,364/1,364)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 13, cyto 7, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009919)
HIX0009919
HIT000424851
(
AK292054
)
(Protein FAM168A; Tongue cancer chemotherapy resistance-associated protein 1;)
genome : 73,117,237 - 73,309,124 (191,888)
query : 1 - 1,454 (1,454/1,454)
8 exons
identity = 0.999
3'(1.000;1.000;0.994;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR029247 : FAM168A/MANI
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, cyto 8, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009919)
HIX0009919
HIT000530157 (
ENST00000432223
)
(Protein FAM168A; Tongue cancer chemotherapy resistance-associated protein 1;)
genome : 73,141,208 - 73,179,537 (38,330)
query : 1 - 696 (696/696)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_nucl 14.5, nucl 10, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009919)
HIX0210472
HIT000638526 (
ENST00000539481
)
(Nucleoplasmin core domain containing protein.)
genome : 73,163,065 - 73,163,389 (325)
query : 1 - 325 (325/325)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210472)
HIX0210477
HIT000639686_02 (
ENST00000540641
)
(Hypothetical protein.)
genome : 73,221,703 - 73,221,865 (163)
query : 1 - 163 (163/163)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto_nucl 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210477)
HIX0172522
HIT000521740 (
ENST00000423806
)
(High mobility group nucleosome-binding domain-containing family protein.)
genome : 73,291,298 - 73,291,562 (265)
query : 1 - 265 (265/265)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172522)
HIX0219414
HIT000635572 (
ENST00000536527
)
(Pleckstrin homology domain containing protein.)
genome : 73,357,624 - 73,361,756 (4,133)
query : 1 - 424 (424/433)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.979
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto_nucl 5, nucl 3, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219414)
HIX0219414
HIT000643577 (
ENST00000544532
)
(Conserved hypothetical protein.)
genome : 73,358,698 - 73,362,924 (4,227)
query : 1 - 556 (556/556)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto_nucl 8.16667, extr 7, nucl 7, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219414)
HIX0219414
HIT000644843 (
ENST00000545798
)
(Pleckstrin homology domain containing protein.)
genome : 73,358,700 - 73,362,896 (4,197)
query : 1 - 534 (534/534)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto_nucl 6, nucl 4, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219414)
HIX0219414
HIT000640805 (
ENST00000541760
)
(Pleckstrin homology domain containing protein.)
genome : 73,358,734 - 73,363,115 (4,382)
query : 1 - 562 (562/562)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, extr 5, cyto_nucl 4.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219414)
HIX0219170
HIT000011339
(
AK054725
)
Representative transcript
(Conserved hypothetical protein.)
genome : 73,363,485 - 73,373,857 (10,373)
query : 5 - 2,026 (2,022/2,048)
3 exons
identity = 1.000
5'(1.000;1.000;0.999)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 6.5, cyto_nucl 6.5, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219170)
HIX0219170
HIT000524125 (
ENST00000426191
)
(Conserved hypothetical protein.)
genome : 73,363,485 - 73,373,857 (10,373)
query : 1 - 2,022 (2,022/2,022)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 6.5, cyto_nucl 6.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219170)
HIX0219170
HIT000639202 (
ENST00000540157
)
(Conserved hypothetical protein.)
genome : 73,363,665 - 73,371,970 (8,306)
query : 1 - 568 (568/568)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219170)
HIX0219170
HIT000644151 (
ENST00000545106
)
(Conserved hypothetical protein.)
genome : 73,371,354 - 73,372,779 (1,426)
query : 1 - 813 (813/813)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 10.5, cyto 10, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219170)
HIX0219170
HIT000643327 (
ENST00000544282
)
(Hypothetical short protein.)
genome : 73,373,398 - 73,373,860 (463)
query : 1 - 375 (375/375)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, cyto_nucl 3.5, nucl 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219170)
HIX0009921
HIT000199744 (
NM_002869
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,386,684 - 73,472,201 (85,518)
query : 1 - 3,407 (3,407/3,419)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, nucl 5.5, golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000319527 (
NM_198896
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,386,684 - 73,472,201 (85,518)
query : 1 - 3,407 (3,407/3,419)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13.5, nucl 6.5, golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000722986 (
NM_001243718
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,386,683 - 73,472,201 (85,519)
query : 1 - 3,096 (3,096/3,096)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13.5, nucl 7.5, extr 3, golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000722987_02 (
NM_001243719
)
(Ras-related protein Rab-6A isoform c.)
genome : 73,386,683 - 73,471,138 (84,456)
query : 1 - 2,863 (2,863/2,863)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000031646
(
BC003617
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,386,938 - 73,472,097 (85,160)
query : 1 - 3,050 (3,050/3,070)
8 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, nucl 5.5, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000263043
(
BC068486
)
Representative transcript
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,386,941 - 73,472,178 (85,238)
query : 1 - 3,085 (3,085/3,100)
9 exons
identity = 0.997
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.989)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, nucl 5.5, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000335718
(
BC096818
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,386,941 - 73,472,136 (85,196)
query : 1 - 3,078 (3,078/3,093)
8 exons
identity = 0.997
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
0.996)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13.5, nucl 6.5, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF148210
Mus
sp. (Mouse) : AK083262
Danio
sp. (Zebrafish) : BC044491
Gallus
sp. (Chicken) : CR390639
Tetraodon
sp. (Tetraodon) : CR692686
Pongo
sp. (Orangutan) : CR858905
Monodelphis
sp. (Opossum) : ENSMODT00000009619
Oryzias
sp. (Medaka) : ENSORLT00000002307
Takifugu
sp. (Fugu) : SINFRUT00000179103
Macaca
sp. (Macaque) : XM_001115437
Bos
sp. (Cow) : XM_001252029
Equus
sp. (Horse) : XM_001496099
Canis
sp. (Dog) : XM_845178
Pan
sp. (Chimpanzee) : XR_025483
HIX0009921
HIT000118774 (
ENST00000310653
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,386,938 - 73,472,182 (85,245)
query : 1 - 3,134 (3,134/3,134)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, nucl 5.5, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000013771
(
AK057157
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,386,939 - 73,472,166 (85,228)
query : 1 - 3,120 (3,120/3,120)
8 exons
identity = 0.997
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
0.993)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, nucl 5.5, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000064325
(
AF052130
)
(Hypothetical short protein.)
genome : 73,386,940 - 73,388,754 (1,815)
query : 1 - 1,809 (1,809/1,810)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13, extr 4, mito 4, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000129925 (
ENST00000336083
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,386,941 - 73,472,136 (85,196)
query : 1 - 3,085 (3,085/3,085)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13.5, nucl 6.5, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000494263
(
AK299639
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,388,238 - 73,431,919 (43,682)
query : 1 - 1,178 (1,178/1,178)
6 exons
identity = 0.997
3'(0.997;1.000;0.989;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, nucl 5.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000422929
(
AK290132
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,388,309 - 73,471,850 (83,542)
query : 1 - 1,431 (1,431/1,431)
8 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
0.996)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13.5, nucl 6.5, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000496158
(
AK301534
)
(Ras-related protein Rab-6A isoform a.)
genome : 73,388,444 - 73,471,138 (82,695)
query : 4 - 1,105 (1,102/1,105)
8 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.997
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 16, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000641018 (
ENST00000541973
)
(Ras-related protein Rab-6A isoform c.)
genome : 73,388,444 - 73,471,140 (82,697)
query : 1 - 1,104 (1,104/1,104)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000635611 (
ENST00000536566
)
(Ras-related protein Rab-6A isoform c.)
genome : 73,388,444 - 73,471,138 (82,695)
query : 1 - 1,102 (1,102/1,102)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000331331
(
AK223551
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,388,636 - 73,472,119 (83,484)
query : 1 - 1,373 (1,373/1,373)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;0.991;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14, nucl 4.5, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000422545
(
AK289748
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,388,666 - 73,472,119 (83,454)
query : 1 - 1,343 (1,343/1,343)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13.5, nucl 6.5, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000428177
(
AK309311
)
(Ras-related protein Rab-6A isoform c.)
genome : 73,388,782 - 73,472,118 (83,337)
query : 2 - 967 (966/967)
6 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;0.990)5'
coverage = 0.999
InterPro :
IPR001806 : Small GTPase superfamily
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14.5, cyto 8.5, extr 4, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000070714
(
AF130122
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,388,937 - 73,471,688 (82,752)
query : 3 - 643 (641/683)
8 exons
identity = 0.998
3'(0.986;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.939
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, nucl 5.5, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000070225
(
AF119836
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,388,900 - 73,471,749 (82,850)
query : 1 - 739 (739/739)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, nucl 5.5, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000195226
(
M28212
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,388,900 - 73,471,749 (82,850)
query : 1 - 740 (740/740)
8 exons
identity = 0.995
3'(0.972;1.000;1.000;1.000;1.000;1.000;1.000;
0.993)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13.5, nucl 6.5, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000640633 (
ENST00000541588
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,388,939 - 73,472,119 (83,181)
query : 1 - 758 (758/758)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13.5, nucl 7.5, extr 3, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000070732
(
AF130986
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,388,943 - 73,471,680 (82,738)
query : 1 - 627 (627/627)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13.5, nucl 6.5, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000073705
(
AF198616
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,388,943 - 73,471,680 (82,738)
query : 1 - 627 (627/627)
8 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.991;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, nucl 5.5, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000080876
(
AF498939
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,388,943 - 73,471,680 (82,738)
query : 1 - 627 (627/627)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13.5, nucl 6.5, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000080878
(
AF498941
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,388,943 - 73,471,680 (82,738)
query : 1 - 627 (627/627)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, nucl 5.5, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000266615
(
BT019698
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,388,944 - 73,471,680 (82,737)
query : 1 - 626 (626/627)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.998
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13.5, nucl 6.5, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000268853
(
CR541984
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,388,943 - 73,471,680 (82,738)
query : 1 - 627 (627/627)
8 exons
identity = 0.998
3'(1.000;1.000;0.989;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, nucl 5.5, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000343335
(
DQ437503
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,388,943 - 73,471,680 (82,738)
query : 1 - 315 (315/315)
5 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;0.986)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13.5, nucl 7.5, extr 3, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000644670 (
ENST00000545625
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,388,953 - 73,471,683 (82,731)
query : 1 - 447 (447/447)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 4, golg 4, cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000639816 (
ENST00000540771
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,390,699 - 73,472,164 (81,466)
query : 1 - 680 (680/699)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.973
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 14, nucl 12, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000636491_02 (
ENST00000537446
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,390,731 - 73,471,703 (80,973)
query : 1 - 447 (447/447)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 4, golg 4, cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000483441 (
ENST00000400470
)
(Ras-related protein Rab-6B.)
genome : 73,415,209 - 73,471,655 (56,447)
query : 1 - 522 (522/522)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 6, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0210466
HIT000637669 (
ENST00000538624
)
(Non-protein coding transcript.)
genome : 73,433,412 - 73,433,739 (328)
query : 19 - 210 (192/210)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210466)
HIX0009921
HIT000093633
(
BC034996
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,440,522 - 73,472,062 (31,541)
query : 1 - 1,798 (1,798/1,813)
2 exons
identity = 0.997
3'(0.997;0.998)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, plas 9, cyto_mito 3.33333, mito 3,
E.R._mito 2.83333, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0009921
HIT000640840 (
ENST00000541795
)
(Ras-related protein Rab-6A; Rab-6;)
genome : 73,440,509 - 73,472,062 (31,554)
query : 1 - 1,812 (1,812/1,812)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, plas 11, cyto_mito 3.33333, mito 3,
E.R._mito 2.83333, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009921)
HIX0210476
HIT000639592 (
ENST00000540547
)
(Hypothetical short protein.)
genome : 73,471,608 - 73,472,115 (508)
query : 1 - 428 (428/428)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210476)
HIX0009922
HIT000071689
(
AF151876
)
Representative transcript
(39S ribosomal protein L48, mitochondrial; L48mt; MRP-L48; Precursor;)
genome : 73,498,361 - 73,575,656 (77,296)
query : 1 - 1,536 (1,536/1,538)
8 exons
identity = 0.996
5'(0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
InterPro :
IPR027486 : Ribosomal protein S10 domain
IPR027487 : Mitochondrial ribosomal protein L48
GO :
0005761 : Cellular Component : mitochondrial ribosome
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, mito_nucl 15, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009922)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK007653
Danio
sp. (Zebrafish) : BC090274
Bos
sp. (Cow) : BC110207
Gallus
sp. (Chicken) : BX934907
Tetraodon
sp. (Tetraodon) : CR681377
Equus
sp. (Horse) : ENSECAT00000023582
Oryzias
sp. (Medaka) : ENSORLT00000010892
Pongo
sp. (Orangutan) : ENSPPYT00000004359
Takifugu
sp. (Fugu) : SINFRUT00000153763
Rattus
sp. (Rat) : XM_001067066
Macaca
sp. (Macaque) : XM_001110630
Monodelphis
sp. (Opossum) : XM_001368287
Canis
sp. (Dog) : XM_534016
Pan
sp. (Chimpanzee) : XR_024743
HIX0009922
HIT000118762 (
ENST00000310614
)
(39S ribosomal protein L48, mitochondrial; L48mt; MRP-L48; Precursor;)
genome : 73,498,361 - 73,575,656 (77,296)
query : 1 - 1,536 (1,536/1,536)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 11, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009922)
HIX0009922
HIT000072138
(
AF161408
)
(39S ribosomal protein L48, mitochondrial; L48mt; MRP-L48; Precursor;)
genome : 73,498,914 - 73,575,644 (76,731)
query : 2 - 971 (970/1,002)
8 exons
identity = 0.998
5'(0.984;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.990
InterPro :
IPR027486 : Ribosomal protein S10 domain
IPR027487 : Mitochondrial ribosomal protein L48
GO :
0005761 : Cellular Component : mitochondrial ribosome
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, mito_nucl 15, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009922)
HIX0009922
HIT000492370
(
AK297746
)
(39S ribosomal protein L48, mitochondrial; L48mt; MRP-L48; Precursor;)
genome : 73,498,917 - 73,576,178 (77,262)
query : 1 - 1,559 (1,559/1,559)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996)3'
coverage = 1.000
InterPro :
IPR027486 : Ribosomal protein S10 domain
IPR027487 : Mitochondrial ribosomal protein L48
GO :
0005761 : Cellular Component : mitochondrial ribosome
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10.5, mito_nucl 10.3333, extr 10, nucl 9,
cyto_nucl 6.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009922)
HIX0009922
HIT000608215 (
ENST00000508278
)
(39S ribosomal protein L48, mitochondrial; L48mt; MRP-L48; Precursor;)
genome : 73,498,917 - 73,576,178 (77,262)
query : 1 - 1,560 (1,560/1,560)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10.5, mito_nucl 10.3333, extr 10, nucl 9,
cyto_nucl 6.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009922)
HIX0009922
HIT000634574 (
ENST00000535529
)
(39S ribosomal protein L48, mitochondrial; L48mt; MRP-L48; Precursor;)
genome : 73,498,917 - 73,576,178 (77,262)
query : 1 - 1,560 (1,560/1,560)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10.5, mito_nucl 10.3333, extr 10, nucl 9,
cyto_nucl 6.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009922)
HIX0009922
HIT000205825 (
NM_016055
)
(39S ribosomal protein L48, mitochondrial; L48mt; MRP-L48; Precursor;)
genome : 73,498,917 - 73,575,656 (76,740)
query : 1 - 980 (980/997)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, mito_nucl 15, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009922)
HIX0009922
HIT000639207 (
ENST00000540162
)
(39S ribosomal protein L48, mitochondrial; L48mt; MRP-L48; Precursor;)
genome : 73,498,922 - 73,575,560 (76,639)
query : 1 - 1,004 (1,004/1,004)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, cyto_nucl 9.33333, nucl 7.5,
cyto_pero 6.83333, extr 5, golg 4, pero 2.5, extr_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009922)
HIX0009922
HIT000034557
(
BC009764
)
(39S ribosomal protein L48, mitochondrial; L48mt; MRP-L48; Precursor;)
genome : 73,498,928 - 73,575,650 (76,723)
query : 5 - 967 (963/995)
8 exons
identity = 0.998
5'(0.982;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.996
InterPro :
IPR027486 : Ribosomal protein S10 domain
IPR027487 : Mitochondrial ribosomal protein L48
GO :
0005761 : Cellular Component : mitochondrial ribosome
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, mito_nucl 16, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009922)
HIX0009922
HIT000643185 (
ENST00000544140
)
(39S ribosomal protein L48, mitochondrial; L48mt; MRP-L48; Precursor;)
genome : 73,498,928 - 73,571,525 (72,598)
query : 1 - 996 (996/996)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 11, nucl 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009922)
HIX0009922
HIT000643864 (
ENST00000544819
)
(39S ribosomal protein L48, mitochondrial; L48mt; MRP-L48; Precursor;)
genome : 73,498,930 - 73,575,469 (76,540)
query : 1 - 742 (742/742)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 7.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009922)
HIX0009922
HIT000600388 (
ENST00000497094
)
(39S ribosomal protein L48, mitochondrial; L48mt; MRP-L48; Precursor;)
genome : 73,498,936 - 73,555,979 (57,044)
query : 1 - 531 (531/531)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 2.5, cyto_nucl 2.5, pero 2, nucl 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009922)
HIX0009922
HIT000428871
(
AK310005
)
(39S ribosomal protein L48, mitochondrial; L48mt; MRP-L48; Precursor;)
genome : 73,498,940 - 73,575,643 (76,704)
query : 3 - 1,199 (1,197/1,199)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR027486 : Ribosomal protein S10 domain
IPR027487 : Mitochondrial ribosomal protein L48
GO :
0005761 : Cellular Component : mitochondrial ribosome
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 7.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009922)
HIX0009922
HIT000428085
(
AK309219
)
(39S ribosomal protein L48, mitochondrial; L48mt; MRP-L48; Precursor;)
genome : 73,498,939 - 73,571,525 (72,587)
query : 1 - 985 (985/985)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 11, nucl 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009922)
HIX0009922
HIT000509774 (
ENST00000411840
)
(39S ribosomal protein L48, mitochondrial; L48mt; MRP-L48; Precursor;)
genome : 73,498,940 - 73,575,643 (76,704)
query : 1 - 1,197 (1,197/1,197)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 7.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009922)
HIX0009922
HIT000481669 (
ENST00000398483
)
(39S ribosomal protein L48, mitochondrial; L48mt; MRP-L48; Precursor;)
genome : 73,498,951 - 73,575,650 (76,700)
query : 1 - 1,058 (1,058/1,058)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 7.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009922)
HIX0009922
HIT000634322 (
ENST00000535277
)
(39S ribosomal protein L48, mitochondrial; L48mt; MRP-L48; Precursor;)
genome : 73,498,951 - 73,556,026 (57,076)
query : 1 - 598 (598/598)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24.5, mito_nucl 14.8333, nucl 4,
cyto_nucl 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009922)
HIX0009922
HIT000641348 (
ENST00000542303
)
(39S ribosomal protein L48, mitochondrial; L48mt; MRP-L48; Precursor;)
genome : 73,498,954 - 73,575,647 (76,694)
query : 1 - 661 (661/661)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 10, E.R._mito 10, mito_pero 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009922)
HIX0009922
HIT000636052 (
ENST00000537007
)
(39S ribosomal protein L48, mitochondrial; L48mt; MRP-L48; Precursor;)
genome : 73,498,975 - 73,555,986 (57,012)
query : 1 - 287 (287/287)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10, mito 9, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009922)
HIX0009922
HIT000642103 (
ENST00000543058
)
(39S ribosomal protein L48, mitochondrial; L48mt; MRP-L48; Precursor;)
genome : 73,499,002 - 73,575,652 (76,651)
query : 1 - 699 (699/699)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, extr 4, pero 2, golg 2, extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009922)
HIX0009922
HIT000642419 (
ENST00000543374
)
(39S ribosomal protein L48, mitochondrial; L48mt; MRP-L48; Precursor;)
genome : 73,519,353 - 73,556,182 (36,830)
query : 1 - 463 (463/463)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 12, nucl 4, mito 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009922)
HIX0128684
HIT000344728 (
ENST00000363105
)
(Hypothetical protein.)
genome : 73,543,427 - 73,543,735 (309)
query : 1 - 309 (309/309)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0128684)
HIX0009922
HIT000094448
(
BC036501
)
(39S ribosomal protein L48, mitochondrial; L48mt; MRP-L48; Precursor;)
genome : 73,553,138 - 73,575,644 (22,507)
query : 4 - 1,945 (1,942/1,968)
5 exons
identity = 0.989
5'(0.984;1.000;1.000;0.989;0.997)3'
coverage = 0.994
InterPro :
IPR027486 : Ribosomal protein S10 domain
IPR027487 : Mitochondrial ribosomal protein L48
GO :
0005761 : Cellular Component : mitochondrial ribosome
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 7.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009922)
HIX0009922
HIT000120090 (
ENST00000314282
)
(39S ribosomal protein L48, mitochondrial; L48mt; MRP-L48; Precursor;)
genome : 73,553,158 - 73,575,644 (22,487)
query : 1 - 1,922 (1,922/1,922)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 7.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009922)
HIX0210452
HIT000635968 (
ENST00000536923
)
(Caffeine-induced death protein 2 family protein.)
genome : 73,561,514 - 73,562,256 (743)
query : 1 - 432 (432/432)
2 exons
identity = 0.982
3'(1.000;0.968)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 10, nucl 7, cyto_pero 7, cyto_plas 7,
cyto_golg 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210452)
HIX0009923
HIT000002909
(
AK000434
)
Representative transcript
(Conserved hypothetical protein.)
genome : 73,583,714 - 73,587,890 (4,177)
query : 1 - 815 (815/833)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 9, cyto_nucl 9, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009923)
HIX0009923
HIT000206237 (
NM_016565
)
(CHCH domain containing protein.)
genome : 73,583,714 - 73,587,890 (4,177)
query : 1 - 815 (815/833)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 9, cyto_nucl 9, nucl 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009923)
HIX0009923
HIT000026346
(
AL359618
)
(CHCH domain containing protein.)
genome : 73,583,800 - 73,587,870 (4,071)
query : 1 - 709 (709/812)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR010625 : CHCH
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 9, cyto_nucl 9, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009923)
HIX0009923
HIT000309800 (
ENST00000355693
)
(CHCH domain containing protein.)
genome : 73,583,712 - 73,588,033 (4,322)
query : 1 - 960 (960/960)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 9, cyto_nucl 9, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009923)
HIX0009923
HIT000644172 (
ENST00000545127
)
(CHCH domain containing protein.)
genome : 73,583,714 - 73,587,719 (4,006)
query : 1 - 922 (922/922)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 9, cyto_nucl 9, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009923)
HIX0009923
HIT000074835
(
AF242180
)
(Conserved hypothetical protein.)
genome : 73,583,807 - 73,584,581 (775)
query : 1 - 775 (775/791)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 6.16667, cyto_mito 5.83333,
mito 5.5, nucl 4.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009923)
HIX0009923
HIT000338397
(
BC106036
)
(CHCH domain containing protein.)
genome : 73,583,813 - 73,587,906 (4,094)
query : 1 - 732 (732/747)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR010625 : CHCH
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 9, cyto_nucl 9, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009923)
HIX0009923
HIT000640500 (
ENST00000541455
)
(Conserved hypothetical protein.)
genome : 73,583,807 - 73,585,520 (1,714)
query : 1 - 1,038 (1,038/1,038)
2 exons
identity = 0.996
3'(1.000;0.934)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 6.16667, cyto_mito 5.83333,
mito 5.5, nucl 4.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009923)
HIX0009923
HIT000022157
(
AK097302
)
(Conserved hypothetical protein.)
genome : 73,583,814 - 73,586,343 (2,530)
query : 1 - 2,529 (2,529/2,529)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 6.16667, cyto_mito 5.83333,
mito 5.5, nucl 4.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009923)
HIX0009923
HIT000636334 (
ENST00000537289
)
(CHCH domain containing protein.)
genome : 73,584,042 - 73,587,888 (3,847)
query : 1 - 582 (582/582)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 9, cyto_nucl 9, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009923)
HIX0209677
HIT000432970
(
AK314104
)
Representative transcript
(Conserved hypothetical protein.)
genome : 73,584,160 - 73,585,520 (1,361)
query : 1 - 685 (685/685)
2 exons
identity = 0.990
5'(0.991;0.977)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 6, cyto 6, cyto_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209677)
HIX0009923
HIT000643620 (
ENST00000544575
)
(Conserved hypothetical protein.)
genome : 73,586,804 - 73,587,611 (808)
query : 1 - 449 (449/449)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 7.5, nucl 5.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009923)
HIX0009923
HIT000636626 (
ENST00000537581
)
(Non-protein coding transcript.)
genome : 73,587,200 - 73,587,946 (747)
query : 1 - 566 (566/566)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009923)
HIX0009924
HIT000724599 (
NM_001267806
)
(Proteasomal ATPase-associated factor 1; Protein G-16; WD repeat-containing protein 71;)
genome : 73,587,744 - 73,638,780 (51,037)
query : 1 - 1,548 (1,548/1,569)
12 exons
identity = 0.995
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 14.5, cyto 11.5, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000492882
(
AK298258
)
(Proteasomal ATPase-associated factor 1; Protein G-16; WD repeat-containing protein 71;)
genome : 73,587,744 - 73,638,615 (50,872)
query : 1 - 1,383 (1,383/1,383)
12 exons
identity = 0.994
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 14, cyto 12, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000640996 (
ENST00000541951
)
(Proteasomal ATPase-associated factor 1; Protein G-16; WD repeat-containing protein 71;)
genome : 73,587,744 - 73,638,615 (50,872)
query : 1 - 1,383 (1,383/1,383)
12 exons
identity = 0.995
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 14.5, cyto 11.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000209762 (
NM_025155
)
(Proteasomal ATPase-associated factor 1; Protein G-16; WD repeat-containing protein 71;)
genome : 73,588,014 - 73,638,780 (50,767)
query : 1 - 1,605 (1,605/1,626)
12 exons
identity = 0.996
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 14.5, nucl 11.5, extr 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000724596 (
NM_001267803
)
(Proteasomal ATPase-associated factor 1 isoform 1.)
genome : 73,588,014 - 73,638,780 (50,767)
query : 1 - 1,674 (1,674/1,695)
13 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.3333, nucl 14, cyto 10.5,
cyto_pero 6.83333, extr 3, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000724597 (
NM_001267804
)
(Proteasomal ATPase-associated factor 1 isoform 1.)
genome : 73,588,014 - 73,638,780 (50,767)
query : 1 - 1,665 (1,665/1,686)
13 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.3333, nucl 14, cyto 10.5,
cyto_pero 6.83333, extr 3, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000724598 (
NM_001267805
)
(Proteasomal ATPase-associated factor 1 isoform 1.)
genome : 73,588,014 - 73,638,780 (50,767)
query : 1 - 1,661 (1,661/1,682)
13 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.3333, nucl 14, cyto 10.5,
cyto_pero 6.83333, extr 3, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000118741 (
ENST00000310571
)
(Proteasomal ATPase-associated factor 1; Protein G-16; WD repeat-containing protein 71;)
genome : 73,588,014 - 73,638,779 (50,766)
query : 1 - 1,604 (1,604/1,604)
12 exons
identity = 0.996
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 14.5, nucl 11.5, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000091639
(
BC028677
)
(Conserved hypothetical protein.)
genome : 73,588,019 - 73,591,528 (3,510)
query : 6 - 1,805 (1,800/1,820)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000363061 (
ENST00000381783
)
(Conserved hypothetical protein.)
genome : 73,588,019 - 73,591,733 (3,715)
query : 1 - 2,005 (2,005/2,020)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_nucl 2, nucl 1.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000604658 (
ENST00000504441
)
(Proteasomal ATPase-associated factor 1; Protein G-16; WD repeat-containing protein 71;)
genome : 73,588,025 - 73,625,492 (37,468)
query : 1 - 975 (975/975)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.3333, nucl 13, cyto 9.5, extr 7,
cyto_pero 5.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000330281
(
AK222501
)
(Proteasomal ATPase-associated factor 1; Protein G-16; WD repeat-containing protein 71;)
genome : 73,588,033 - 73,638,771 (50,739)
query : 1 - 1,577 (1,577/1,592)
12 exons
identity = 0.994
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 14.5, nucl 11.5, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000005184
(
AK021910
)
(Proteasomal ATPase-associated factor 1; Protein G-16; WD repeat-containing protein 71;)
genome : 73,588,033 - 73,638,779 (50,747)
query : 1 - 1,585 (1,585/1,585)
12 exons
identity = 0.996
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 14.5, nucl 11.5, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171255
Gallus
sp. (Chicken) : AJ720215
Bos
sp. (Cow) : BC118307
Equus
sp. (Horse) : ENSECAT00000022006
Monodelphis
sp. (Opossum) : ENSMODT00000009574
Pongo
sp. (Orangutan) : ENSPPYT00000004361
Pan
sp. (Chimpanzee) : XM_001174850
Canis
sp. (Dog) : XM_534014
HIX0009924
HIT000642859 (
ENST00000543814
)
(Proteasomal ATPase-associated factor 1 isoform 1.)
genome : 73,588,037 - 73,625,522 (37,486)
query : 1 - 882 (882/882)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.3333, nucl 12, cyto 10.5, extr 7,
cyto_pero 6.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000500007
(
AK316394
)
(Proteasomal ATPase-associated factor 1 isoform 3.)
genome : 73,588,040 - 73,638,658 (50,619)
query : 1 - 1,697 (1,697/1,697)
12 exons
identity = 0.994
5'(1.000;1.000;0.981)3'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 14.5, cyto 11.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000634649 (
ENST00000535604
)
(Proteasomal ATPase-associated factor 1 isoform 3.)
genome : 73,588,040 - 73,638,658 (50,619)
query : 1 - 1,695 (1,695/1,695)
12 exons
identity = 0.996
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 14.5, cyto 11.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000635048 (
ENST00000536003
)
(Proteasomal ATPase-associated factor 1 isoform 3.)
genome : 73,588,042 - 73,638,773 (50,732)
query : 1 - 1,639 (1,639/1,639)
13 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.3333, nucl 14, cyto 10.5,
cyto_pero 6.83333, extr 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000641338 (
ENST00000542293
)
(Proteasomal ATPase-associated factor 1 isoform 1.)
genome : 73,588,042 - 73,620,557 (32,516)
query : 1 - 667 (667/667)
7 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 7, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000384650
(
AK225520
)
(Proteasomal ATPase-associated factor 1; Protein G-16; WD repeat-containing protein 71;)
genome : 73,588,046 - 73,638,771 (50,726)
query : 1 - 1,564 (1,564/1,594)
12 exons
identity = 0.995
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 14.5, nucl 11.5, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000098197
(
BC045774
)
(Conserved hypothetical protein.)
genome : 73,588,046 - 73,591,733 (3,688)
query : 1 - 1,979 (1,979/1,994)
2 exons
identity = 0.990
5'(1.000;0.990)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 12, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000091636
(
BC028628
)
Representative transcript
(Proteasomal ATPase-associated factor 1 isoform 1.)
genome : 73,588,052 - 73,638,773 (50,722)
query : 4 - 1,632 (1,629/1,649)
13 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.996
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.3333, nucl 14, cyto 10.5,
cyto_pero 6.83333, extr 3, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000039203
(
BC021541
)
(Proteasomal ATPase-associated factor 1; Protein G-16; WD repeat-containing protein 71;)
genome : 73,588,050 - 73,638,771 (50,722)
query : 1 - 1,560 (1,560/1,580)
12 exons
identity = 0.995
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 14.5, nucl 11.5, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000032632
(
BC006142
)
(Proteasomal ATPase-associated factor 1; Protein G-16; WD repeat-containing protein 71;)
genome : 73,588,061 - 73,638,775 (50,715)
query : 1 - 1,553 (1,553/1,587)
12 exons
identity = 0.995
5'(1.000;1.000;0.990)3'
coverage = 0.999
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 14.5, nucl 11.5, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000242640
(
AF087895
)
(Proteasomal ATPase-associated factor 1 isoform 3.)
genome : 73,588,073 - 73,638,780 (50,708)
query : 1 - 1,599 (1,599/1,620)
13 exons
identity = 0.992
5'(0.902;1.000;1.000;0.990)3'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.3333, nucl 14, cyto 10.5,
cyto_pero 6.83333, extr 3, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000643597 (
ENST00000544552
)
(Proteasomal ATPase-associated factor 1 isoform 3.)
genome : 73,588,073 - 73,638,790 (50,718)
query : 1 - 1,612 (1,612/1,612)
13 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.3333, nucl 14, cyto 10.5,
cyto_pero 6.83333, extr 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000645084 (
ENST00000546039
)
(Proteasomal ATPase-associated factor 1; Protein G-16; WD repeat-containing protein 71;)
genome : 73,589,822 - 73,627,661 (37,840)
query : 1 - 805 (805/805)
8 exons
identity = 0.991
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, cyto 7, mito 5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0036407
HIT000096850
(
BC041762
)
Representative transcript
(Conserved hypothetical protein.)
genome : 73,594,907 - 73,597,718 (2,812)
query : 1 - 2,149 (2,149/2,182)
3 exons
identity = 0.990
5'(0.998;0.982;0.990)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto_nucl 10.1667, nucl 7, cyto 7,
cyto_pero 5.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036407)
HIX0219500
HIT000519883 (
ENST00000421949
)
(Conserved hypothetical protein.)
genome : 73,594,907 - 73,597,718 (2,812)
query : 31 - 2,176 (2,146/2,176)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 10, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219500)
HIX0009924
HIT000357664 (
ENST00000376384
)
(Proteasomal ATPase-associated factor 1; Protein G-16; WD repeat-containing protein 71;)
genome : 73,598,108 - 73,638,770 (40,663)
query : 1 - 1,491 (1,491/1,491)
11 exons
identity = 0.995
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.3333, nucl 14, cyto 10.5,
cyto_pero 6.83333, extr 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000642124 (
ENST00000543079
)
(Proteasomal ATPase-associated factor 1; Protein G-16; WD repeat-containing protein 71;)
genome : 73,598,122 - 73,611,429 (13,308)
query : 1 - 390 (390/390)
5 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 8, cyto_nucl 6.5, mito 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000635627 (
ENST00000536582
)
(Proteasomal ATPase-associated factor 1; Protein G-16; WD repeat-containing protein 71;)
genome : 73,598,246 - 73,611,450 (13,205)
query : 1 - 582 (582/582)
4 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 10.5, cyto_nucl 9, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000427999
(
AK309133
)
(Proteasomal ATPase-associated factor 1 isoform 3.)
genome : 73,599,839 - 73,638,770 (38,932)
query : 1 - 1,802 (1,802/1,803)
10 exons
identity = 0.996
5'(1.000)3'
coverage = 0.999
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 16, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009924
HIT000643954 (
ENST00000544909
)
(Proteasomal ATPase-associated factor 1 isoform 3.)
genome : 73,599,839 - 73,638,770 (38,932)
query : 1 - 1,802 (1,802/1,802)
10 exons
identity = 0.996
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 16, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009924)
HIX0009910
HIT000366671 (
NM_001040118
)
(Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1; Centaurin-delta-2; Cnt-d2;)
genome : 72,396,114 - 72,463,434 (67,321)
query : 1 - 5,137 (5,137/5,155)
35 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 17, nucl 14
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009910)
HIX0009910
HIT000205364 (
NM_015242
)
(Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform a.)
genome : 72,396,114 - 72,433,403 (37,290)
query : 1 - 4,948 (4,948/4,966)
33 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 12.5, cysk 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009910)
HIX0009910
HIT000560076 (
NM_001135190
)
(Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform d.)
genome : 72,396,114 - 72,433,403 (37,290)
query : 1 - 4,732 (4,732/4,750)
31 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 11, cyto_mito 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009910)
HIX0009910
HIT000312922 (
ENST00000359373
)
(Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1; Centaurin-delta-2; Cnt-d2;)
genome : 72,396,114 - 72,504,644 (108,531)
query : 1 - 5,767 (5,767/5,767)
34 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 16, nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009910)
HIX0009910
HIT000553572 (
ENST00000455638
)
(Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1; Centaurin-delta-2; Cnt-d2;)
genome : 72,396,115 - 72,438,173 (42,059)
query : 1 - 4,914 (4,914/4,914)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 16, nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009910)
HIX0009910
HIT000249883
(
AK160383
)
(Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1; Centaurin-delta-2; Cnt-d2;)
genome : 72,396,115 - 72,433,133 (37,019)
query : 1 - 5,614 (5,614/5,614)
31 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.997;1.000;
1.000;1.000;0.990;1.000;1.000;1.000;1.000;
1.000;0.985;1.000;1.000;1.000;1.000;1.000;
0.998;0.994;0.987)5'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR001164 : Arf GTPase activating protein
IPR001849 : Pleckstrin homology domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
0008060 : Molecular Function : ARF GTPase activator activity
0008270 : Molecular Function : zinc ion binding
0032312 : Biological Process : regulation of ARF GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009910)
HIX0009910
HIT000570497 (
ENST00000465814
)
(Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform a.)
genome : 72,396,115 - 72,433,133 (37,019)
query : 1 - 5,612 (5,612/5,612)
31 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009910)
HIX0009910
HIT000329408
(
AB209473
)
(Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1; Centaurin-delta-2; Cnt-d2;)
genome : 72,396,120 - 72,504,644 (108,525)
query : 1 - 5,761 (5,761/5,761)
34 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.995;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000159 : Ras-association
IPR000198 : Rho GTPase-activating protein domain
IPR001164 : Arf GTPase activating protein
IPR001660 : Sterile alpha motif domain
IPR001849 : Pleckstrin homology domain
IPR008936 : Rho GTPase activation protein
IPR013761 : Sterile alpha motif/pointed domain
IPR021129 : Sterile alpha motif, type 1
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
0008060 : Molecular Function : ARF GTPase activator activity
0008270 : Molecular Function : zinc ion binding
0032312 : Biological Process : regulation of ARF GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 16, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009910)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168575
Mus
sp. (Mouse) : AK137455
Rattus
sp. (Rat) : BC088328
Bos
sp. (Cow) : ENSBTAT00000039909
Canis
sp. (Dog) : ENSCAFT00000009156
Equus
sp. (Horse) : ENSECAT00000017568
Oryzias
sp. (Medaka) : ENSORLT00000014152
Pongo
sp. (Orangutan) : ENSPPYT00000004347
Tetraodon
sp. (Tetraodon) : GSTENT00004670001
Monodelphis
sp. (Opossum) : XM_001369104
Pan
sp. (Chimpanzee) : XM_508625
Danio
sp. (Zebrafish) : XM_695389
HIX0009910
HIT000386087
(
AY553630
)
Representative transcript
(Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1; Centaurin-delta-2; Cnt-d2;)
genome : 72,396,120 - 72,463,448 (67,329)
query : 3 - 5,146 (5,144/5,146)
35 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.921)5'
coverage = 1.000
InterPro :
IPR000159 : Ras-association
IPR000198 : Rho GTPase-activating protein domain
IPR001164 : Arf GTPase activating protein
IPR001660 : Sterile alpha motif domain
IPR001849 : Pleckstrin homology domain
IPR008936 : Rho GTPase activation protein
IPR013761 : Sterile alpha motif/pointed domain
IPR021129 : Sterile alpha motif, type 1
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
0008060 : Molecular Function : ARF GTPase activator activity
0008270 : Molecular Function : zinc ion binding
0032312 : Biological Process : regulation of ARF GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 17, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009910)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168575
Mus
sp. (Mouse) : AK137455
Rattus
sp. (Rat) : BC088328
Bos
sp. (Cow) : ENSBTAT00000039909
Canis
sp. (Dog) : ENSCAFT00000009156
Equus
sp. (Horse) : ENSECAT00000017568
Oryzias
sp. (Medaka) : ENSORLT00000014152
Pongo
sp. (Orangutan) : ENSPPYT00000004347
Tetraodon
sp. (Tetraodon) : GSTENT00004670001
Monodelphis
sp. (Opossum) : XM_001369104
Pan
sp. (Chimpanzee) : XM_508625
Danio
sp. (Zebrafish) : XM_695389
HIX0009910
HIT000477052 (
ENST00000393609
)
(Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1; Centaurin-delta-2; Cnt-d2;)
genome : 72,396,120 - 72,463,448 (67,329)
query : 1 - 5,145 (5,145/5,145)
35 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 17, nucl 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009910)
HIX0009910
HIT000128825 (
ENST00000334211
)
(Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform a.)
genome : 72,396,120 - 72,433,403 (37,284)
query : 1 - 4,942 (4,942/4,942)
33 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 12.5, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009910)
HIX0009910
HIT000000507
(
AB018325
)
(Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform a.)
genome : 72,396,120 - 72,433,380 (37,261)
query : 1 - 4,919 (4,919/4,919)
33 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 12.5, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009910)
HIX0009910
HIT000083833
(
AY049732
)
(Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1; Centaurin-delta-2; Cnt-d2;)
genome : 72,396,120 - 72,424,196 (28,077)
query : 2 - 4,779 (4,778/4,779)
30 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000159 : Ras-association
IPR000198 : Rho GTPase-activating protein domain
IPR001164 : Arf GTPase activating protein
IPR001849 : Pleckstrin homology domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
0008060 : Molecular Function : ARF GTPase activator activity
0008270 : Molecular Function : zinc ion binding
0032312 : Biological Process : regulation of ARF GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 15.5, cyto 10, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009910)
HIX0009910
HIT000477049 (
ENST00000393605
)
(Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1; Centaurin-delta-2; Cnt-d2;)
genome : 72,396,120 - 72,424,196 (28,077)
query : 1 - 4,778 (4,778/4,778)
30 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 15.5, cyto 10, extr 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009910)
HIX0009910
HIT000501543
(
BC140792
)
(Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform d.)
genome : 72,396,633 - 72,433,073 (36,441)
query : 1 - 3,883 (3,883/3,883)
31 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.981;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000159 : Ras-association
IPR000198 : Rho GTPase-activating protein domain
IPR001164 : Arf GTPase activating protein
IPR001849 : Pleckstrin homology domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
0008060 : Molecular Function : ARF GTPase activator activity
0008270 : Molecular Function : zinc ion binding
0032312 : Biological Process : regulation of ARF GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 11, cyto_mito 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009910)
HIX0009910
HIT000502968
(
BC144562
)
(Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform a.)
genome : 72,396,633 - 72,433,073 (36,441)
query : 1 - 4,066 (4,066/4,066)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.995;1.000;
0.981;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000159 : Ras-association
IPR000198 : Rho GTPase-activating protein domain
IPR001164 : Arf GTPase activating protein
IPR001849 : Pleckstrin homology domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
0008060 : Molecular Function : ARF GTPase activator activity
0008270 : Molecular Function : zinc ion binding
0032312 : Biological Process : regulation of ARF GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 12.5, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009910)
HIX0009910
HIT000524457 (
ENST00000426523
)
(Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform a.)
genome : 72,396,633 - 72,433,073 (36,441)
query : 1 - 4,066 (4,066/4,066)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 12.5, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009910)
HIX0009910
HIT000527620 (
ENST00000429686
)
(Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform d.)
genome : 72,396,633 - 72,433,073 (36,441)
query : 1 - 3,883 (3,883/3,883)
31 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 11, cyto_mito 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009910)
HIX0009910
HIT000330131
(
AJ621557
)
(Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1; Centaurin-delta-2; Cnt-d2;)
genome : 72,397,087 - 72,438,173 (41,087)
query : 1 - 4,335 (4,335/4,353)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.996
InterPro :
IPR000159 : Ras-association
IPR000198 : Rho GTPase-activating protein domain
IPR001164 : Arf GTPase activating protein
IPR001660 : Sterile alpha motif domain
IPR001849 : Pleckstrin homology domain
IPR008936 : Rho GTPase activation protein
IPR013761 : Sterile alpha motif/pointed domain
IPR021129 : Sterile alpha motif, type 1
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
0008060 : Molecular Function : ARF GTPase activator activity
0008270 : Molecular Function : zinc ion binding
0032312 : Biological Process : regulation of ARF GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 17, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009910)
HIX0009910
HIT000079268
(
AF411983
)
(Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1; Centaurin-delta-2; Cnt-d2;)
genome : 72,397,087 - 72,423,320 (26,234)
query : 1 - 3,393 (3,393/3,411)
28 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.995
InterPro :
IPR000159 : Ras-association
IPR000198 : Rho GTPase-activating protein domain
IPR001164 : Arf GTPase activating protein
IPR001849 : Pleckstrin homology domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
0008060 : Molecular Function : ARF GTPase activator activity
0008270 : Molecular Function : zinc ion binding
0032312 : Biological Process : regulation of ARF GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 17, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009910)
HIX0009917
HIT000108982 (
ENST00000263674
)
(Rho guanine nucleotide exchange factor 17; 164 kDa Rho-specific guanine-nucleotide exchange factor; p164-RhoGEF; p164RhoGEF; Tumor endothelial marker 4;)
genome : 73,019,334 - 73,080,136 (60,803)
query : 1 - 7,853 (7,853/7,853)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 11.5, cyto 4.5, plas 4, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009917)
HIX0009917
HIT000205087 (
NM_014786
)
(Rho guanine nucleotide exchange factor 17; 164 kDa Rho-specific guanine-nucleotide exchange factor; p164-RhoGEF; p164RhoGEF; Tumor endothelial marker 4;)
genome : 73,019,663 - 73,080,425 (60,763)
query : 1 - 7,813 (7,813/7,830)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 11.5, cyto 4.5, plas 4, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009917)
HIX0009917
HIT000501181
(
BC137228
)
(Rho guanine nucleotide exchange factor 17; 164 kDa Rho-specific guanine-nucleotide exchange factor; p164-RhoGEF; p164RhoGEF; Tumor endothelial marker 4;)
genome : 73,019,663 - 73,079,953 (60,291)
query : 1 - 7,341 (7,341/7,341)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000219 : Dbl homology (DH) domain
IPR017986 : WD40-repeat-containing domain
GO :
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0005515 : Molecular Function : protein binding
0035023 : Biological Process : regulation of Rho protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 11.5, cyto 4.5, plas 4, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009917)
HIX0009917
HIT000078598
(
AF378754
)
Representative transcript
(Rho guanine nucleotide exchange factor 17; 164 kDa Rho-specific guanine-nucleotide exchange factor; p164-RhoGEF; p164RhoGEF; Tumor endothelial marker 4;)
genome : 73,019,669 - 73,080,136 (60,468)
query : 1 - 7,519 (7,519/7,540)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000219 : Dbl homology (DH) domain
IPR017986 : WD40-repeat-containing domain
GO :
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0005515 : Molecular Function : protein binding
0035023 : Biological Process : regulation of Rho protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 11.5, cyto 4.5, plas 4, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009917)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK122250
Canis
sp. (Dog) : ENSCAFT00000009046
Oryzias
sp. (Medaka) : ENSORLT00000012935
Takifugu
sp. (Fugu) : SINFRUT00000168649
Equus
sp. (Horse) : XM_001917456
Danio
sp. (Zebrafish) : XM_001920414
Rattus
sp. (Rat) : XM_218963
Pan
sp. (Chimpanzee) : XR_024728
Bos
sp. (Cow) : XR_027902
HIX0009917
HIT000000043
(
AB002335
)
(Rho guanine nucleotide exchange factor 17.)
genome : 73,020,888 - 73,080,127 (59,240)
query : 1 - 6,289 (6,289/6,289)
21 exons
identity = 1.000
5'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 11.8333, cyto 8.5,
cyto_mito 6.16667, plas 4, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009917)
HIX0009920
HIT000068636
(
AF101054
)
(Pleckstrin homology domain-containing family B member 1; PH domain-containing family B member 1; Evectin-1; PH domain-containing protein in retina 1; PHRET1; Pleckstrin homology domain retinal protein 1;)
genome : 73,357,223 - 73,373,863 (16,641)
query : 1 - 2,270 (2,270/2,297)
7 exons
identity = 0.996
5'(0.989;1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14.5, nucl 8.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000222140
(
U89715
)
Representative transcript
(Pleckstrin homology domain-containing family B member 1; PH domain-containing family B member 1; Evectin-1; PH domain-containing protein in retina 1; PHRET1; Pleckstrin homology domain retinal protein 1;)
genome : 73,357,223 - 73,373,863 (16,641)
query : 1 - 2,375 (2,375/2,402)
8 exons
identity = 0.997
5'(0.989;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, nucl 18, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171285
Mus
sp. (Mouse) : AF000272
Rattus
sp. (Rat) : AF081582
Gallus
sp. (Chicken) : AJ851710
Bos
sp. (Cow) : BC105416
Oryzias
sp. (Medaka) : ENSORLT00000018478
Pongo
sp. (Orangutan) : ENSPPYT00000004356
Pan
sp. (Chimpanzee) : XM_001174830
Monodelphis
sp. (Opossum) : XM_001368471
Equus
sp. (Horse) : XM_001496117
Canis
sp. (Dog) : XM_856042
HIX0009920
HIT000208307 (
NM_021200
)
(Pleckstrin homology domain-containing family B member 1; PH domain-containing family B member 1; Evectin-1; PH domain-containing protein in retina 1; PHRET1; Pleckstrin homology domain retinal protein 1;)
genome : 73,357,223 - 73,373,863 (16,641)
query : 1 - 2,379 (2,379/2,391)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, nucl 18, cyto 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000559614 (
NM_001130033
)
(Pleckstrin homology domain-containing family B member 1; PH domain-containing family B member 1; Evectin-1; PH domain-containing protein in retina 1; PHRET1; Pleckstrin homology domain retinal protein 1;)
genome : 73,357,223 - 73,373,863 (16,641)
query : 1 - 2,274 (2,274/2,286)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14.5, nucl 8.5, extr 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000308522 (
ENST00000354190
)
(Pleckstrin homology domain-containing family B member 1; PH domain-containing family B member 1; Evectin-1; PH domain-containing protein in retina 1; PHRET1; Pleckstrin homology domain retinal protein 1;)
genome : 73,357,223 - 73,373,864 (16,642)
query : 1 - 2,380 (2,380/2,380)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, nucl 18, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000481678 (
ENST00000398492
)
(Pleckstrin homology domain-containing family B member 1; PH domain-containing family B member 1; Evectin-1; PH domain-containing protein in retina 1; PHRET1; Pleckstrin homology domain retinal protein 1;)
genome : 73,357,223 - 73,373,864 (16,642)
query : 1 - 2,275 (2,275/2,275)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14.5, nucl 8.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000433614
(
AK314748
)
(Pleckstrin homology domain-containing family B member 1; PH domain-containing family B member 1; Evectin-1; PH domain-containing protein in retina 1; PHRET1; Pleckstrin homology domain retinal protein 1;)
genome : 73,357,626 - 73,372,647 (15,022)
query : 1 - 760 (760/760)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, nucl 18, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000559615 (
NM_001130034
)
(Pleckstrin homology domain-containing family B member 1 isoform b.)
genome : 73,358,594 - 73,373,863 (15,270)
query : 1 - 2,120 (2,120/2,132)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 8.5, cyto_nucl 8, cyto 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000559616 (
NM_001130035
)
(Pleckstrin homology domain-containing family B member 1 isoform d.)
genome : 73,358,594 - 73,373,863 (15,270)
query : 1 - 2,015 (2,015/2,027)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, cyto_mito 12, extr 5, cyto_nucl 4.83333,
nucl 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000104018 (
ENST00000227214
)
(Pleckstrin homology domain-containing family B member 1 isoform d.)
genome : 73,358,594 - 73,373,864 (15,271)
query : 1 - 2,016 (2,016/2,016)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, cyto_mito 12, extr 5, cyto_nucl 4.83333,
nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000481680 (
ENST00000398494
)
(Pleckstrin homology domain-containing family B member 1 isoform b.)
genome : 73,358,654 - 73,373,864 (15,211)
query : 1 - 2,061 (2,061/2,061)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 8.5, cyto_nucl 8, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000033632
(
BC008075
)
(Pleckstrin homology domain-containing family B member 1 isoform d.)
genome : 73,358,656 - 73,373,860 (15,205)
query : 1 - 1,950 (1,950/2,021)
7 exons
identity = 0.999
5'(0.992;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, cyto_mito 12, extr 5, cyto_nucl 4.83333,
nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000642130 (
ENST00000543085
)
(Pleckstrin homology domain-containing family B member 1 isoform c.)
genome : 73,358,671 - 73,372,710 (14,040)
query : 1 - 632 (632/632)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 11, nucl 4, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000329651
(
AB209716
)
(Pleckstrin homology domain-containing family B member 1 isoform d.)
genome : 73,358,682 - 73,373,856 (15,175)
query : 1 - 1,920 (1,920/1,920)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, cyto_mito 12, extr 5, cyto_nucl 4.83333,
nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000422417
(
AK289620
)
(Pleckstrin homology domain-containing family B member 1 isoform d.)
genome : 73,358,682 - 73,372,929 (14,248)
query : 1 - 993 (993/993)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.990;1.000)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, cyto_mito 12, extr 5, cyto_nucl 4.83333,
nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000495923
(
AK301299
)
(Pleckstrin homology domain-containing family B member 1 isoform b.)
genome : 73,358,700 - 73,372,771 (14,072)
query : 2 - 923 (922/923)
8 exons
identity = 0.999
5'(1.000;0.987;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 8.5, cyto_nucl 8, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000490657
(
AK296033
)
(Pleckstrin homology domain-containing family B member 1 isoform c.)
genome : 73,358,700 - 73,373,208 (14,509)
query : 1 - 1,164 (1,164/1,164)
7 exons
identity = 0.998
5'(0.988;0.987;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 21.5, cyto_mito 13.5, cyto_nucl 5.33333, cyto 4,
nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000638594 (
ENST00000539549
)
(Pleckstrin homology domain-containing family B member 1 isoform c.)
genome : 73,358,700 - 73,373,208 (14,509)
query : 1 - 1,165 (1,165/1,165)
7 exons
identity = 0.992
5'(1.000;1.000;1.000;1.000;1.000;0.953;0.991)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto_nucl 4.5, cyto 3.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000637272 (
ENST00000538227
)
(Pleckstrin homology domain-containing family B member 1 isoform b.)
genome : 73,358,700 - 73,371,918 (13,219)
query : 1 - 577 (577/577)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto_nucl 6, nucl 5.5, extr 5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000638202 (
ENST00000539157
)
(Pleckstrin homology domain-containing family B member 1 isoform a.)
genome : 73,358,700 - 73,366,954 (8,255)
query : 1 - 584 (584/586)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 8.5, cyto_nucl 7.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000645296 (
ENST00000546251
)
(Pleckstrin homology domain-containing family B member 1 isoform c.)
genome : 73,358,700 - 73,364,509 (5,810)
query : 1 - 551 (551/562)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.980
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17.5, cyto_mito 11, extr 7, cyto_nucl 4.83333,
nucl 3.5, extr_plas 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000634627 (
ENST00000535582
)
(Pleckstrin homology domain-containing family B member 1 isoform c.)
genome : 73,358,700 - 73,364,062 (5,363)
query : 1 - 552 (552/567)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.974
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto_nucl 6, nucl 4.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000068385
(
AF093249
)
(Pleckstrin homology domain-containing family B member 1 isoform d.)
genome : 73,358,710 - 73,373,863 (15,154)
query : 1 - 1,899 (1,899/1,926)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, cyto_mito 12, extr 5, cyto_nucl 4.83333,
nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000068618
(
AF100612
)
(Pleckstrin homology domain-containing family B member 1 isoform b.)
genome : 73,358,710 - 73,373,863 (15,154)
query : 1 - 2,004 (2,004/2,031)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 8.5, cyto_nucl 8, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000422706
(
AK289909
)
(Pleckstrin homology domain-containing family B member 1 isoform d.)
genome : 73,358,716 - 73,373,015 (14,300)
query : 1 - 1,045 (1,045/1,045)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, cyto_mito 12, extr 5, cyto_nucl 4.83333,
nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000430024
(
AK311158
)
(Conserved hypothetical protein.)
genome : 73,358,734 - 73,373,054 (14,321)
query : 1 - 963 (963/963)
7 exons
identity = 0.996
5'(1.000;1.000;0.953;0.982;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 8, extr_plas 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000642569 (
ENST00000543524
)
(Pleckstrin homology domain-containing family B member 1 isoform b.)
genome : 73,358,759 - 73,372,541 (13,783)
query : 1 - 656 (656/656)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto_nucl 6, nucl 4.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000640642 (
ENST00000541597
)
(Pleckstrin homology domain-containing family B member 1 isoform b.)
genome : 73,358,977 - 73,372,567 (13,591)
query : 1 - 685 (685/685)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto_nucl 6, extr 5, nucl 4.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000559617 (
NM_001130036
)
(Pleckstrin homology domain-containing family B member 1 isoform d.)
genome : 73,359,735 - 73,373,863 (14,129)
query : 1 - 2,147 (2,147/2,159)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, cyto_mito 12, extr 5, cyto_nucl 4.83333,
nucl 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000634174 (
ENST00000535129
)
(Pleckstrin homology domain-containing family B member 1 isoform d.)
genome : 73,359,735 - 73,372,765 (13,031)
query : 1 - 1,049 (1,049/1,049)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, cyto_mito 12, extr 5, cyto_nucl 4.83333,
nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000422906
(
AK290109
)
(Pleckstrin homology domain-containing family B member 1 isoform d.)
genome : 73,359,735 - 73,372,726 (12,992)
query : 1 - 1,010 (1,010/1,010)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, cyto_mito 12, extr 5, cyto_nucl 4.83333,
nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000641434 (
ENST00000542389
)
(Pleckstrin homology domain-containing family B member 1 isoform b.)
genome : 73,359,959 - 73,371,840 (11,882)
query : 1 - 618 (618/618)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, nucl 7.5, cyto_nucl 6.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000639476 (
ENST00000540431
)
(Pleckstrin homology domain-containing family B member 1 isoform c.)
genome : 73,360,057 - 73,372,596 (12,540)
query : 1 - 579 (579/579)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 7, mito_pero 7, extr 5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
HIX0009920
HIT000066487
(
AF081583
)
(Pleckstrin homology domain-containing family B member 1 isoform b.)
genome : 73,360,091 - 73,373,778 (13,688)
query : 1 - 1,812 (1,812/1,812)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 8.5, cyto_nucl 8, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009920)
AP000593.4
72000001-72043681 F +
NCBI
AP002892.3
72043682-72078682 F +
NCBI
AP003785.3
72078683-72232270 F +
NCBI
AP005019.1
72232271-72323389 O +
NCBI
AP003065.2
72323390-72493121 F +
NCBI
AP002381.3
72493122-72681555 F +
NCBI
AP004241.2
72681556-72832141 F +
NCBI
AP002455.4
72832142-72875343 F +
NCBI
AP002761.3
72875344-73072331 F +
NCBI
AP000562.5
73072332-73089563 F +
NCBI
AP000763.5
73089564-73268502 F +
NCBI
AP000860.4
73268503-73372359 F +
NCBI
AP002993.3
73372360-73467758 F +
NCBI
AP002770.3
73467759-73600000 F +
NCBI