bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0009978
HIT000436050
(
BC152459
)
(GRB2-associated-binding protein 2; GRB2-associated binder 2; Growth factor receptor bound protein 2-associated protein 2; pp100;)
genome : 77,926,342 - 78,052,926 (126,585)
query : 1 - 6,053 (6,053/6,073)
10 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009978)
HIX0009978
HIT000211796 (
NM_080491
)
(GRB2-associated-binding protein 2; GRB2-associated binder 2; Growth factor receptor bound protein 2-associated protein 2; pp100;)
genome : 77,926,336 - 78,128,868 (202,533)
query : 1 - 6,115 (6,115/6,118)
10 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009978)
HIX0009978
HIT000204068 (
NM_012296
)
(GRB2-associated-binding protein 2; GRB2-associated binder 2; Growth factor receptor bound protein 2-associated protein 2; pp100;)
genome : 77,926,336 - 78,052,926 (126,591)
query : 1 - 6,059 (6,059/6,062)
10 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009978)
HIX0009978
HIT000314769 (
ENST00000361507
)
(GRB2-associated-binding protein 2; GRB2-associated binder 2; Growth factor receptor bound protein 2-associated protein 2; pp100;)
genome : 77,926,343 - 78,128,852 (202,510)
query : 1 - 6,092 (6,092/6,092)
10 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009978)
HIX0009978
HIT000058557
(
AB018413
)
Representative transcript
(GRB2-associated-binding protein 2; GRB2-associated binder 2; Growth factor receptor bound protein 2-associated protein 2; pp100;)
genome : 77,926,343 - 78,128,766 (202,424)
query : 1 - 6,006 (6,006/6,006)
10 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009978)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF104244
Rattus
sp. (Rat) : AF230367
Gallus
sp. (Chicken) : CR406057
Oryzias
sp. (Medaka) : ENSORLT00000003988
Pongo
sp. (Orangutan) : ENSPPYT00000004426
Pan
sp. (Chimpanzee) : ENSPTRT00000050725
Tetraodon
sp. (Tetraodon) : GSTENT00035236001
Takifugu
sp. (Fugu) : SINFRUT00000143464
Macaca
sp. (Macaque) : XM_001093917
Monodelphis
sp. (Opossum) : XM_001362839
Equus
sp. (Horse) : XM_001494299
Canis
sp. (Dog) : XM_542285
Bos
sp. (Cow) : XM_607792
Danio
sp. (Zebrafish) : XM_687843
HIX0009978
HIT000000288
(
AB011143
)
(GRB2-associated-binding protein 2; GRB2-associated binder 2; Growth factor receptor bound protein 2-associated protein 2; pp100;)
genome : 77,926,343 - 78,052,926 (126,584)
query : 1 - 6,052 (6,052/6,052)
10 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009978)
HIX0009978
HIT000132779 (
ENST00000340149
)
(GRB2-associated-binding protein 2; GRB2-associated binder 2; Growth factor receptor bound protein 2-associated protein 2; pp100;)
genome : 77,926,343 - 78,052,926 (126,584)
query : 1 - 6,052 (6,052/6,052)
10 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009978)
HIX0009978
HIT000390613
(
BC131711
)
(GRB2-associated-binding protein 2; GRB2-associated binder 2; Growth factor receptor bound protein 2-associated protein 2; pp100;)
genome : 77,930,207 - 78,128,766 (198,560)
query : 5 - 2,146 (2,142/2,146)
10 exons
identity = 1.000
3'(1.000)5'
coverage = 0.998
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009978)
HIX0009978
HIT000625246 (
ENST00000526030
)
(GRB2-associated-binding protein 2 isoform b.)
genome : 77,938,003 - 78,128,868 (190,866)
query : 1 - 650 (650/650)
4 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 12, mito 6, cyto_nucl 6, cyto_pero 6,
cyto_plas 6, cyto_golg 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009978)
HIX0009978
HIT000628054 (
ENST00000528886
)
(GRB2-associated-binding protein 2; GRB2-associated binder 2; Growth factor receptor bound protein 2-associated protein 2; pp100;)
genome : 77,961,317 - 78,129,394 (168,078)
query : 1 - 543 (543/543)
3 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, cyto 10, extr 8, nucl 8, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009978)
HIX0009978
HIT000630053 (
ENST00000530915
)
(GRB2-associated-binding protein 2 isoform b.)
genome : 77,961,403 - 78,128,825 (167,423)
query : 1 - 567 (567/567)
4 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, extr 11, cyto_nucl 8, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009978)
HIX0009978
HIT000633868 (
ENST00000534823
)
(GRB2-associated-binding protein 2; GRB2-associated binder 2; Growth factor receptor bound protein 2-associated protein 2; PH domain-containing adaptor molecule p97;)
genome : 77,991,506 - 78,128,817 (137,312)
query : 1 - 568 (568/568)
2 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 9.5, nucl 8.5, mito 6, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009978)
HIX0210403
HIT000633230 (
ENST00000534168
)
(Conserved hypothetical protein.)
genome : 78,035,804 - 78,155,095 (119,292)
query : 1 - 437 (437/437)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 6, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210403)
HIX0209959
HIT000626236 (
ENST00000527030
)
(Conserved hypothetical protein.)
genome : 78,099,107 - 78,103,451 (4,345)
query : 1 - 365 (365/365)
2 exons
identity = 0.995
5'(1.000;0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209959)
HIX0036394
HIT000095777
(
BC039514
)
Representative transcript
(Conserved hypothetical protein.)
genome : 78,135,030 - 78,140,882 (5,853)
query : 1 - 1,640 (1,640/1,654)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036394)
HIX0036394
HIT000612798 (
ENST00000513207
)
(Conserved hypothetical protein.)
genome : 78,135,028 - 78,140,882 (5,855)
query : 1 - 1,642 (1,642/1,642)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036394)
HIX0009979
HIT000112027 (
ENST00000281038
)
(Probable asparagine--tRNA ligase, mitochondrial; EC=6.1.1.22; Asparaginyl-tRNA synthetase; AsnRS; Precursor;)
genome : 78,147,007 - 78,285,909 (138,903)
query : 1 - 2,519 (2,519/2,519)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.22
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009979)
HIX0009979
HIT000209379 (
NM_024678
)
(Probable asparagine--tRNA ligase, mitochondrial; EC=6.1.1.22; Asparaginyl-tRNA synthetase; AsnRS; Precursor;)
genome : 78,147,007 - 78,285,909 (138,903)
query : 1 - 2,519 (2,519/2,519)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.22
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009979)
HIX0009979
HIT000722891 (
NM_001243251
)
(Probable asparagine--tRNA ligase, mitochondrial; EC=6.1.1.22; Asparaginyl-tRNA synthetase; AsnRS; Precursor;)
genome : 78,147,007 - 78,285,909 (138,903)
query : 1 - 2,038 (2,038/2,038)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.22
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, cyto_mito 15, cyto 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009979)
HIX0009979
HIT000033455
(
BC007800
)
(Probable asparagine--tRNA ligase, mitochondrial; EC=6.1.1.22; Asparaginyl-tRNA synthetase; AsnRS; Precursor;)
genome : 78,147,244 - 78,285,719 (138,476)
query : 1 - 2,092 (2,092/2,110)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.993;0.992;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.22
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR002312 : Aspartyl/Asparaginyl-tRNA synthetase, class IIb
IPR004364 : Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR004365 : OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR004522 : Asparagine-tRNA ligase
IPR006195 : Aminoacyl-tRNA synthetase, class II
IPR012340 : Nucleic acid-binding, OB-fold
IPR018150 : Aminoacyl-tRNA synthetase, class II (D/K/N)-like
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004816 : Molecular Function : asparagine-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006421 : Biological Process : asparaginyl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009979)
HIX0009979
HIT000628924 (
ENST00000529771
)
(Probable asparagine--tRNA ligase, mitochondrial; EC=6.1.1.22; Asparaginyl-tRNA synthetase; AsnRS; Precursor;)
genome : 78,147,235 - 78,154,805 (7,571)
query : 1 - 725 (725/725)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.22
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, cyto_nucl 4, nucl 3, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009979)
HIX0009979
HIT000013594
(
AK056980
)
Representative transcript
(Probable asparagine--tRNA ligase, mitochondrial; EC=6.1.1.22; Asparaginyl-tRNA synthetase; AsnRS; Precursor;)
genome : 78,147,237 - 78,285,826 (138,590)
query : 1 - 2,206 (2,206/2,206)
14 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;1.000;0.986;0.983;0.991;0.998)5'
coverage = 1.000
EC number :
EC 6.1.1.22
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR002312 : Aspartyl/Asparaginyl-tRNA synthetase, class IIb
IPR004364 : Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR004365 : OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR004522 : Asparagine-tRNA ligase
IPR006195 : Aminoacyl-tRNA synthetase, class II
IPR012340 : Nucleic acid-binding, OB-fold
IPR018150 : Aminoacyl-tRNA synthetase, class II (D/K/N)-like
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004816 : Molecular Function : asparagine-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006421 : Biological Process : asparaginyl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009979)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB174230
Mus
sp. (Mouse) : AK046799
Rattus
sp. (Rat) : BC104691
Danio
sp. (Zebrafish) : BC124277
Bos
sp. (Cow) : BC142045
Gallus
sp. (Chicken) : CR406057
Tetraodon
sp. (Tetraodon) : CR686165
Equus
sp. (Horse) : ENSECAT00000018860
Oryzias
sp. (Medaka) : ENSORLT00000003467
Pongo
sp. (Orangutan) : ENSPPYT00000004429
Takifugu
sp. (Fugu) : SINFRUT00000143471
Monodelphis
sp. (Opossum) : XM_001377502
Pan
sp. (Chimpanzee) : XM_522122
Canis
sp. (Dog) : XM_845968
HIX0009979
HIT000628020 (
ENST00000528850
)
(Probable asparagine--tRNA ligase, mitochondrial; EC=6.1.1.22; Asparaginyl-tRNA synthetase; AsnRS; Precursor;)
genome : 78,147,269 - 78,284,575 (137,307)
query : 1 - 2,137 (2,137/2,137)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.22
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, extr 8, cyto 1.5, cyto_nucl 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009979)
HIX0009979
HIT000010368
(
AK027094
)
(Probable asparagine--tRNA ligase, mitochondrial; EC=6.1.1.22; Asparaginyl-tRNA synthetase; AsnRS; Precursor;)
genome : 78,147,311 - 78,279,705 (132,395)
query : 29 - 1,524 (1,496/1,561)
12 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.993;1.000)5'
coverage = 0.981
EC number :
EC 6.1.1.22
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR002312 : Aspartyl/Asparaginyl-tRNA synthetase, class IIb
IPR004364 : Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR004522 : Asparagine-tRNA ligase
IPR006195 : Aminoacyl-tRNA synthetase, class II
IPR018150 : Aminoacyl-tRNA synthetase, class II (D/K/N)-like
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004816 : Molecular Function : asparagine-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006421 : Biological Process : asparaginyl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 5, cyto_nucl 4.5, extr 4, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009979)
HIX0009979
HIT000384574
(
AK225444
)
(Probable asparagine--tRNA ligase, mitochondrial; EC=6.1.1.22; Asparaginyl-tRNA synthetase; AsnRS; Precursor;)
genome : 78,147,351 - 78,279,705 (132,355)
query : 1 - 1,455 (1,455/1,455)
12 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.993;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.22
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
InterPro :
IPR002312 : Aspartyl/Asparaginyl-tRNA synthetase, class IIb
IPR004364 : Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR004522 : Asparagine-tRNA ligase
IPR006195 : Aminoacyl-tRNA synthetase, class II
IPR018150 : Aminoacyl-tRNA synthetase, class II (D/K/N)-like
GO :
0000166 : Molecular Function : nucleotide binding
0004812 : Molecular Function : aminoacyl-tRNA ligase activity
0004816 : Molecular Function : asparagine-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006418 : Biological Process : tRNA aminoacylation for protein translation
0006421 : Biological Process : asparaginyl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 13.5, nucl 4.5, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009979)
HIX0009979
HIT000624585 (
ENST00000525345
)
(Probable asparagine--tRNA ligase, mitochondrial; EC=6.1.1.22; Asparaginyl-tRNA synthetase; AsnRS; Precursor;)
genome : 78,147,779 - 78,277,313 (129,535)
query : 1 - 861 (861/861)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.22
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 13.5, nucl 10.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009979)
HIX0009979
HIT000629032 (
ENST00000529880
)
(Probable asparagine--tRNA ligase, mitochondrial; EC=6.1.1.22; Asparaginyl-tRNA synthetase; AsnRS; Precursor;)
genome : 78,176,929 - 78,285,563 (108,635)
query : 1 - 755 (755/755)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.22
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29.5, mito_pero 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009979)
HIX0009979
HIT000628726 (
ENST00000529571
)
(Probable asparagine--tRNA ligase, mitochondrial; EC=6.1.1.22; Asparaginyl-tRNA synthetase; AsnRS; Precursor;)
genome : 78,239,888 - 78,285,919 (46,032)
query : 1 - 594 (594/594)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.22
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009979)
HIX0036414
HIT000626184 (
ENST00000526976
)
(Conserved hypothetical protein.)
genome : 78,244,222 - 78,269,611 (25,390)
query : 1 - 717 (717/717)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 10.3333, nucl 8, cyto 6.5,
extr_plas 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036414)
HIX0036414
HIT000097249
(
BC042472
)
Representative transcript
(Conserved hypothetical protein.)
genome : 78,244,222 - 78,269,593 (25,372)
query : 1 - 699 (699/714)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 10.3333, nucl 8, cyto 6.5,
extr_plas 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036414)
HIX0009979
HIT000625917 (
ENST00000526709
)
(Probable asparagine--tRNA ligase, mitochondrial; EC=6.1.1.22; Asparaginyl-tRNA synthetase; AsnRS; Precursor;)
genome : 78,279,761 - 78,282,715 (2,955)
query : 1 - 374 (374/374)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.1.1.22
KEGG pathway :
00970 : Aminoacyl-tRNA biosynthesis (32)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 12.5, cyto 8.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009979)
HIX0209885
HIT000625240 (
ENST00000526024
)
(Conserved hypothetical protein.)
genome : 78,292,720 - 78,293,201 (482)
query : 1 - 482 (482/482)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11, extr 5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209885)
HIX0009980
HIT000111722 (
ENST00000278550
)
(Teneurin-4; Ten-4; Protein Odd Oz/ten-m homolog 4; Tenascin-M4; Ten-m4; Teneurin transmembrane protein 4;)
genome : 78,363,876 - 79,151,695 (787,820)
query : 1 - 14,000 (14,000/14,000)
34 exons
identity = 1.000
3'(1.000;1.000;1.000;0.987;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, cyto_mito 7.66667, plas 7, extr_plas 5.5,
nucl 4, mito_pero 2.83333, extr 2, E.R. 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0009980
HIT000055286
(
BX640737
)
(Teneurin-4.)
genome : 78,364,328 - 78,419,504 (55,177)
query : 1 - 8,974 (8,974/8,993)
8 exons
identity = 0.998
3'(0.999;0.993;0.999;0.987;1.000;1.000;0.999;
1.000)5'
coverage = 1.000
InterPro :
IPR006530 : YD repeat
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR022385 : Rhs repeat-associated core
IPR027691 : Teneurin-4
IPR028916 : Tox-GHH domain
GO :
0005887 : Cellular Component : integral component of plasma membrane
0048666 : Biological Process : neuron development
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18, cyto 16, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0009980
HIT000485308 (
NM_001098816
)
(Teneurin-4; Ten-4; Protein Odd Oz/ten-m homolog 4; Tenascin-M4; Ten-m4; Teneurin transmembrane protein 4;)
genome : 78,364,328 - 79,151,695 (787,368)
query : 1 - 13,548 (13,548/13,566)
34 exons
identity = 1.000
3'(1.000;1.000;1.000;0.987;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, cyto_mito 7.66667, plas 7, extr_plas 5.5,
nucl 4, mito_pero 2.83333, extr 2, E.R. 2, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0009980
HIT000001017
(
AB037723
)
Representative transcript
(Teneurin-4.)
genome : 78,364,329 - 78,498,048 (133,720)
query : 1 - 10,826 (10,826/10,826)
19 exons
identity = 0.999
3'(1.000;1.000;1.000;0.987;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0036286
HIT000007209
(
AK023935
)
Representative transcript
(Conserved hypothetical protein.)
genome : 78,364,329 - 78,366,562 (2,234)
query : 1 - 2,234 (2,234/2,234)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 8, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036286)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK186922
HIX0009980
HIT000024241
(
AL080120
)
(Teneurin-4.)
genome : 78,364,407 - 78,369,655 (5,249)
query : 4 - 5,252 (5,249/5,269)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.999
InterPro :
IPR027691 : Teneurin-4
IPR028916 : Tox-GHH domain
GO :
0005887 : Cellular Component : integral component of plasma membrane
0048666 : Biological Process : neuron development
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 12, nucl 6, cyto_pero 6, cyto_plas 6,
cyto_golg 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0009980
HIT000054767
(
BX537983
)
(Teneurin-4.)
genome : 78,368,852 - 78,399,265 (30,414)
query : 1 - 3,468 (3,468/3,486)
6 exons
identity = 0.998
3'(1.000;0.993;0.999;0.980;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006530 : YD repeat
IPR022385 : Rhs repeat-associated core
IPR027691 : Teneurin-4
IPR028916 : Tox-GHH domain
GO :
0005887 : Cellular Component : integral component of plasma membrane
0048666 : Biological Process : neuron development
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, mito 11, cyto 6, mito_pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0009980
HIT000046974
(
AK127101
)
(Teneurin-4.)
genome : 78,368,851 - 78,387,450 (18,600)
query : 1 - 3,320 (3,320/3,320)
5 exons
identity = 0.998
3'(1.000;1.000;0.998;0.987;1.000)5'
coverage = 1.000
InterPro :
IPR006530 : YD repeat
IPR022385 : Rhs repeat-associated core
IPR027691 : Teneurin-4
IPR028916 : Tox-GHH domain
GO :
0005887 : Cellular Component : integral component of plasma membrane
0048666 : Biological Process : neuron development
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15, nucl 9, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0009980
HIT000013145
(
AK056531
)
(Teneurin-4.)
genome : 78,368,851 - 78,381,513 (12,663)
query : 1 - 2,685 (2,685/2,685)
3 exons
identity = 0.998
3'(0.997;0.993;0.999)5'
coverage = 1.000
InterPro :
IPR006530 : YD repeat
IPR022385 : Rhs repeat-associated core
IPR027691 : Teneurin-4
IPR028916 : Tox-GHH domain
GO :
0005887 : Cellular Component : integral component of plasma membrane
0048666 : Biological Process : neuron development
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, mito 8, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0009980
HIT000047578
(
AK127705
)
(Teneurin-4.)
genome : 78,368,852 - 78,413,049 (44,198)
query : 1 - 3,048 (3,048/3,048)
6 exons
identity = 0.998
3'(1.000;0.999;0.987;1.000;0.988;1.000)5'
coverage = 1.000
InterPro :
IPR006530 : YD repeat
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR022385 : Rhs repeat-associated core
IPR027691 : Teneurin-4
GO :
0005887 : Cellular Component : integral component of plasma membrane
0048666 : Biological Process : neuron development
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 17, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : AB026980
Mus
sp. (Mouse) : AF059485
Canis
sp. (Dog) : ENSCAFT00000007634
Equus
sp. (Horse) : ENSECAT00000009190
Oryzias
sp. (Medaka) : ENSORLT00000003506
Pongo
sp. (Orangutan) : ENSPPYT00000004430
Tetraodon
sp. (Tetraodon) : GSTENT00035234001
Takifugu
sp. (Fugu) : SINFRUT00000143478
Rattus
sp. (Rat) : XM_001063599
Monodelphis
sp. (Opossum) : XM_001377472
Pan
sp. (Chimpanzee) : XM_508667
Bos
sp. (Cow) : XM_586751
HIX0009980
HIT000629881 (
ENST00000530738
)
(Teneurin-4.)
genome : 78,368,852 - 78,413,049 (44,198)
query : 1 - 3,048 (3,048/3,048)
6 exons
identity = 0.999
3'(1.000;1.000;0.987;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 17, nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0209934
HIT000625949 (
ENST00000526741
)
(Hypothetical short protein.)
genome : 78,460,295 - 78,467,525 (7,231)
query : 1 - 320 (320/320)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209934)
HIX0009980
HIT000632603 (
ENST00000533525
)
(Teneurin-4.)
genome : 78,482,037 - 78,516,456 (34,420)
query : 1 - 453 (453/453)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0009980
HIT000714822
(
HE578286
)
(Teneurin-4.)
genome : 78,600,908 - 78,780,989 (180,082)
query : 1 - 1,006 (1,006/1,006)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009471 : Teneurin intracellular, N-terminal
IPR027691 : Teneurin-4
GO :
0005887 : Cellular Component : integral component of plasma membrane
0007165 : Biological Process : signal transduction
0016021 : Cellular Component : integral component of membrane
0048666 : Biological Process : neuron development
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15.5, cyto 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0009980
HIT000714823
(
HE578287
)
(Teneurin-4.)
genome : 78,600,908 - 78,780,989 (180,082)
query : 1 - 907 (907/907)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009471 : Teneurin intracellular, N-terminal
IPR027691 : Teneurin-4
GO :
0005887 : Cellular Component : integral component of plasma membrane
0007165 : Biological Process : signal transduction
0016021 : Cellular Component : integral component of membrane
0048666 : Biological Process : neuron development
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 15.5, nucl 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0009980
HIT000632100 (
ENST00000533013
)
(Teneurin-4.)
genome : 78,600,911 - 78,673,264 (72,354)
query : 1 - 587 (587/587)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 14, cyto 6.5, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0009980
HIT000632160 (
ENST00000533074
)
(Teneurin-4.)
genome : 78,600,978 - 78,614,931 (13,954)
query : 1 - 524 (524/524)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 17, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0009980
HIT000714852
(
HE601753
)
(Teneurin-4.)
genome : 78,602,283 - 78,859,808 (257,526)
query : 1 - 967 (967/967)
5 exons
identity = 0.999
3'(1.000;1.000;0.996;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009471 : Teneurin intracellular, N-terminal
GO :
0007165 : Biological Process : signal transduction
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15.5, cyto 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0009980
HIT000721274
(
JN857068
)
(Teneurin-4.)
genome : 78,602,283 - 78,859,808 (257,526)
query : 1 - 967 (967/967)
5 exons
identity = 0.999
3'(1.000;1.000;0.996;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009471 : Teneurin intracellular, N-terminal
GO :
0007165 : Biological Process : signal transduction
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15.5, cyto 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0210129
HIT000628951 (
ENST00000529798
)
(Conserved hypothetical protein.)
genome : 78,635,501 - 78,732,838 (97,338)
query : 1 - 690 (690/690)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 8, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210129)
HIX0026231
HIT000046445
(
AK126572
)
Representative transcript
(Hypothetical protein.)
genome : 78,637,736 - 78,639,468 (1,733)
query : 1 - 1,735 (1,735/1,735)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, mito_nucl 13.6667, nucl 11,
cyto_nucl 7.66667, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026231)
HIX0009980
HIT000714855
(
HE601756
)
(Teneurin-4; Ten-4; Protein Odd Oz/ten-m homolog 4; Tenascin-M4; Ten-m4; Teneurin transmembrane protein 4;)
genome : 78,673,180 - 78,673,399 (220)
query : 11 - 228 (218/232)
1 exon
identity = 0.982
3'(0.982)5'
coverage = 0.940
InterPro :
IPR009471 : Teneurin intracellular, N-terminal
GO :
0007165 : Biological Process : signal transduction
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13, extr 9, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0009980
HIT000721277
(
JN857071
)
(Teneurin-4; Ten-4; Protein Odd Oz/ten-m homolog 4; Tenascin-M4; Ten-m4; Teneurin transmembrane protein 4;)
genome : 78,673,180 - 78,673,399 (220)
query : 11 - 228 (218/232)
1 exon
identity = 0.982
3'(0.982)5'
coverage = 0.940
InterPro :
IPR009471 : Teneurin intracellular, N-terminal
GO :
0007165 : Biological Process : signal transduction
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13, extr 9, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0009980
HIT000714853
(
HE601754
)
(Teneurin-4; Ten-4; Protein Odd Oz/ten-m homolog 4; Tenascin-M4; Ten-m4; Teneurin transmembrane protein 4;)
genome : 78,673,180 - 78,673,398 (219)
query : 10 - 226 (217/230)
1 exon
identity = 0.982
3'(0.982)5'
coverage = 0.943
InterPro :
IPR009471 : Teneurin intracellular, N-terminal
GO :
0007165 : Biological Process : signal transduction
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 6, cyto_nucl 5.66667, cyto_pero 3.16667,
extr 3, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0009980
HIT000714854
(
HE601755
)
(Teneurin-4; Ten-4; Protein Odd Oz/ten-m homolog 4; Tenascin-M4; Ten-m4; Teneurin transmembrane protein 4;)
genome : 78,673,180 - 78,673,398 (219)
query : 10 - 227 (218/231)
1 exon
identity = 0.977
3'(0.977)5'
coverage = 0.944
InterPro :
IPR009471 : Teneurin intracellular, N-terminal
GO :
0007165 : Biological Process : signal transduction
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 6, cyto_nucl 5.66667, cyto_pero 3.16667,
extr 3, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0009980
HIT000721275
(
JN857069
)
(Teneurin-4; Ten-4; Protein Odd Oz/ten-m homolog 4; Tenascin-M4; Ten-m4; Teneurin transmembrane protein 4;)
genome : 78,673,180 - 78,673,398 (219)
query : 10 - 226 (217/230)
1 exon
identity = 0.982
3'(0.982)5'
coverage = 0.943
InterPro :
IPR009471 : Teneurin intracellular, N-terminal
GO :
0007165 : Biological Process : signal transduction
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 6, cyto_nucl 5.66667, cyto_pero 3.16667,
extr 3, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0009980
HIT000721276
(
JN857070
)
(Teneurin-4; Ten-4; Protein Odd Oz/ten-m homolog 4; Tenascin-M4; Ten-m4; Teneurin transmembrane protein 4;)
genome : 78,673,180 - 78,673,398 (219)
query : 10 - 227 (218/231)
1 exon
identity = 0.977
3'(0.977)5'
coverage = 0.944
InterPro :
IPR009471 : Teneurin intracellular, N-terminal
GO :
0007165 : Biological Process : signal transduction
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 6, cyto_nucl 5.66667, cyto_pero 3.16667,
extr 3, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0009980
HIT000427990
(
AK309124
)
(Teneurin-4.)
genome : 78,775,644 - 78,980,718 (205,075)
query : 1 - 984 (984/984)
5 exons
identity = 0.998
3'(0.995;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009471 : Teneurin intracellular, N-terminal
GO :
0007165 : Biological Process : signal transduction
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 18, cyto_nucl 16, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0009980
HIT000631751 (
ENST00000532654
)
(Teneurin-4.)
genome : 78,775,644 - 78,980,718 (205,075)
query : 1 - 984 (984/984)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 18, cyto_nucl 16, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0009980
HIT000632125 (
ENST00000533038
)
(Teneurin-4.)
genome : 78,778,948 - 78,787,438 (8,491)
query : 1 - 863 (863/863)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 10, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0009980
HIT000626931 (
ENST00000527736
)
(Hypothetical short protein.)
genome : 78,780,987 - 78,926,954 (145,968)
query : 1 - 170 (170/170)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0171323
HIT000625172 (
ENST00000525952
)
(Hypothetical short protein.)
genome : 78,803,893 - 78,804,880 (988)
query : 1 - 406 (406/406)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, extr 14, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171323)
HIX0171323
HIT000633647 (
ENST00000534593
)
(Hypothetical protein.)
genome : 78,804,331 - 78,809,048 (4,718)
query : 1 - 720 (720/720)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171323)
HIX0171323
HIT000033739
(
BC008359
)
Representative transcript
(Conserved hypothetical protein.)
genome : 78,804,344 - 78,808,882 (4,539)
query : 1 - 1,880 (1,880/1,898)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171323)
HIX0171323
HIT000625307 (
ENST00000526091
)
(Hypothetical protein.)
genome : 78,804,344 - 78,808,899 (4,556)
query : 1 - 1,897 (1,897/1,897)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171323)
HIX0009980
HIT000627861 (
ENST00000528688
)
(Hypothetical short protein.)
genome : 78,859,775 - 79,150,244 (290,470)
query : 1 - 474 (474/474)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 11, cyto_nucl 2, golg 2, nucl 1.5,
cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0209989
HIT000626640 (
ENST00000527440
)
(Conserved hypothetical protein.)
genome : 78,902,603 - 78,904,205 (1,603)
query : 1 - 374 (374/374)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209989)
HIX0009980
HIT000630706 (
ENST00000531583
)
(Conserved hypothetical protein.)
genome : 78,926,851 - 79,151,992 (225,142)
query : 1 - 744 (744/748)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 12, extr 8, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009980)
HIX0219432
HIT000692315 (
ENST00000580400
)
(Non-protein coding transcript.)
genome : 79,133,213 - 79,133,270 (58)
query : 1 - 58 (58/58)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219432)
HIX0219432
HIT000727243 (
NR_049841
)
(Non-protein coding transcript.)
genome : 79,133,213 - 79,133,270 (58)
query : 1 - 58 (58/58)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219432)
HIX0022508
HIT000004790
(
AK021516
)
Representative transcript
(Conserved hypothetical protein.)
genome : 79,134,603 - 79,136,342 (1,740)
query : 2 - 1,740 (1,739/1,740)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 11, cyto_nucl 10.3333, cyto 7.5,
cyto_pero 4.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022508)
HIX0209939
HIT000626059 (
ENST00000526851
)
(Hypothetical short protein.)
genome : 79,316,011 - 79,323,344 (7,334)
query : 1 - 834 (834/834)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 9.5, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209939)
HIX0171388
HIT000461144_03
(
DQ594613
)
Representative transcript
(Non-protein coding transcript.)
genome : 79,515,695 - 79,515,725 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171388)
AP002985.2
78000001-78058849 F +
NCBI
AP003086.2
78058850-78201953 F +
NCBI
AP003110.2
78201954-78341501 F +
NCBI
AP002768.3
78341502-78502848 F +
NCBI
AP002515.3
78502849-78666685 F +
NCBI
AP002958.2
78666686-78736782 F +
NCBI
AP002957.2
78736783-78822559 F +
NCBI
AP001547.4
78822560-78964094 F +
NCBI
AP000610.5
78964095-78988104 F +
NCBI
AP001838.4
78988105-79196972 F +
NCBI
AP003024.2
79196973-79234053 F +
NCBI
AP001978.5
79234054-79338396 F +
NCBI
AP000478.6
79338397-79460085 F +
NCBI
AP002350.3
79460086-79541128 O +
NCBI
AP001541.4
79541129-79600000 F +
NCBI