bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0037616
HIT000397985 (
NM_001080396
)
(Transmembrane protein FAM155A.)
genome : 107,820,879 - 108,519,460 (698,582)
query : 1 - 3,859 (3,859/3,859)
3 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8, nucl 7, mito 4.5, mito_pero 4.5, plas 4,
E.R. 4, cyto_golg 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037616)
HIX0037616
HIT000503135
(
BC146878
)
(Transmembrane protein FAM155A.)
genome : 107,821,944 - 108,519,061 (697,118)
query : 1 - 2,395 (2,395/2,395)
3 exons
identity = 0.999
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8, nucl 7, mito 4.5, mito_pero 4.5, plas 4,
E.R. 4, cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037616)
HIX0037616
HIT000503385
(
BC157830
)
(Transmembrane protein FAM155A.)
genome : 107,821,944 - 108,519,061 (697,118)
query : 1 - 2,473 (2,473/2,473)
3 exons
identity = 0.967
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8, nucl 7, mito 4.5, mito_pero 4.5, plas 4,
E.R. 4, cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037616)
HIX0037616
HIT000503410
(
BC157855
)
Representative transcript
(Transmembrane protein FAM155A.)
genome : 107,821,944 - 108,519,061 (697,118)
query : 1 - 2,395 (2,395/2,395)
3 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8, nucl 7, mito 4.5, mito_pero 4.5, plas 4,
E.R. 4, cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037616)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC117535
Bos
sp. (Cow) : BC134647
Macaca
sp. (Macaque) : ENSMMUT00000043033
Takifugu
sp. (Fugu) : SINFRUT00000181502
Gallus
sp. (Chicken) : XM_001231424
Monodelphis
sp. (Opossum) : XM_001365389
Equus
sp. (Horse) : XM_001493870
Danio
sp. (Zebrafish) : XM_001921192
Pan
sp. (Chimpanzee) : XM_509725
Rattus
sp. (Rat) : XM_573950
HIX0037616
HIT000503417
(
BC157862
)
(Transmembrane protein FAM155A.)
genome : 107,821,944 - 108,519,061 (697,118)
query : 1 - 2,395 (2,395/2,395)
3 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8, nucl 7, mito 4.5, mito_pero 4.5, plas 4,
E.R. 4, cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037616)
HIX0037616
HIT000192020
(
L10374
)
(Transmembrane protein FAM155A.)
genome : 107,822,318 - 108,519,083 (696,766)
query : 12 - 2,055 (2,044/2,062)
3 exons
identity = 0.998
3'(0.997)5'
coverage = 0.991
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8, nucl 7, mito 4.5, mito_pero 4.5, plas 4,
E.R. 4, cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037616)
HIX0037616
HIT000357195 (
ENST00000375915
)
(Transmembrane protein FAM155A.)
genome : 107,822,318 - 108,519,083 (696,766)
query : 1 - 2,043 (2,043/2,043)
3 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8, nucl 7, mito 4.5, mito_pero 4.5, plas 4,
E.R. 4, cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037616)
HIX0037616
HIT000490069
(
AK295445
)
(Transmembrane protein FAM155A.)
genome : 107,822,420 - 108,519,166 (696,747)
query : 1 - 2,024 (2,024/2,024)
3 exons
identity = 1.000
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8, nucl 7, mito 4.5, mito_pero 4.5, plas 4,
E.R. 4, cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037616)
HIX0059202
HIT000328529
(
AB074273
)
Representative transcript
(Conserved hypothetical protein.)
genome : 108,238,994 - 108,241,579 (2,586)
query : 1 - 2,586 (2,586/2,586)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, cyto 6, nucl 4, cyto_mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059202)
HIX0037537
HIT000097715
(
BC043519
)
Representative transcript
(Conserved hypothetical protein.)
genome : 108,439,709 - 108,487,799 (48,091)
query : 1 - 1,799 (1,799/1,910)
2 exons
identity = 0.998
3'(0.998;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 13.5, cyto 6.5, extr 4, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037537)
HIX0037537
HIT000547485 (
ENST00000449551
)
(Hypothetical short protein.)
genome : 108,440,690 - 108,487,799 (47,110)
query : 1 - 819 (819/819)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 13.5, cyto 6.5, extr 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037537)
HIX0011448
HIT000015728
(
AK090861
)
Representative transcript
(Conserved hypothetical protein.)
genome : 108,522,731 - 108,525,717 (2,987)
query : 3 - 2,990 (2,988/2,990)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 10, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011448)
HIX0011448
HIT000047772
(
AK127899
)
(Conserved hypothetical protein.)
genome : 108,523,578 - 108,525,718 (2,141)
query : 1 - 2,141 (2,141/2,157)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 10, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011448)
HIX0026564
HIT000057480
(
BX648833
)
(DNA ligase 4; EC=6.5.1.1; DNA ligase IV; Polydeoxyribonucleotide synthase [ATP] 4;)
genome : 108,859,794 - 108,870,716 (10,923)
query : 2 - 4,058 (4,057/4,078)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 0.999
EC number :
EC 6.5.1.1
InterPro :
IPR000977 : DNA ligase, ATP-dependent
IPR001357 : BRCT domain
IPR012308 : DNA ligase, ATP-dependent, N-terminal
IPR012309 : DNA ligase, ATP-dependent, C-terminal
IPR012310 : DNA ligase, ATP-dependent, central
IPR012340 : Nucleic acid-binding, OB-fold
IPR016059 : DNA ligase, ATP-dependent, conserved site
IPR021536 : DNA ligase IV domain
GO :
0003677 : Molecular Function : DNA binding
0003909 : Molecular Function : DNA ligase activity
0003910 : Molecular Function : DNA ligase (ATP) activity
0005524 : Molecular Function : ATP binding
0006260 : Biological Process : DNA replication
0006281 : Biological Process : DNA repair
0006310 : Biological Process : DNA recombination
0051103 : Biological Process : DNA ligation involved in DNA repair
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, pero 5, nucl 4, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026564)
HIX0026564
HIT000485175 (
NM_001098268
)
(DNA ligase 4; EC=6.5.1.1; DNA ligase IV; Polydeoxyribonucleotide synthase [ATP] 4;)
genome : 108,859,793 - 108,870,716 (10,924)
query : 1 - 4,059 (4,059/4,077)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.5.1.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, pero 5, nucl 4, cysk 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026564)
HIX0026564
HIT000051922
(
BC037491
)
Representative transcript
(DNA ligase 4; EC=6.5.1.1; DNA ligase IV; Polydeoxyribonucleotide synthase [ATP] 4;)
genome : 108,859,793 - 108,867,882 (8,090)
query : 1 - 3,974 (3,974/3,992)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.5.1.1
InterPro :
IPR000977 : DNA ligase, ATP-dependent
IPR001357 : BRCT domain
IPR012308 : DNA ligase, ATP-dependent, N-terminal
IPR012309 : DNA ligase, ATP-dependent, C-terminal
IPR012310 : DNA ligase, ATP-dependent, central
IPR012340 : Nucleic acid-binding, OB-fold
IPR016059 : DNA ligase, ATP-dependent, conserved site
IPR021536 : DNA ligase IV domain
GO :
0003677 : Molecular Function : DNA binding
0003909 : Molecular Function : DNA ligase activity
0003910 : Molecular Function : DNA ligase (ATP) activity
0005524 : Molecular Function : ATP binding
0006260 : Biological Process : DNA replication
0006281 : Biological Process : DNA repair
0006310 : Biological Process : DNA recombination
0051103 : Biological Process : DNA ligation involved in DNA repair
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, pero 5, nucl 4, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026564)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720061
Mus
sp. (Mouse) : AK148081
Danio
sp. (Zebrafish) : BC150236
Oryzias
sp. (Medaka) : ENSORLT00000005053
Tetraodon
sp. (Tetraodon) : GSTENT00019603001
Takifugu
sp. (Fugu) : SINFRUT00000162220
Rattus
sp. (Rat) : XM_001067682
Macaca
sp. (Macaque) : XM_001084107
Bos
sp. (Cow) : XM_001249516
Monodelphis
sp. (Opossum) : XM_001365316
Equus
sp. (Horse) : XM_001493890
Pan
sp. (Chimpanzee) : XM_509726
Canis
sp. (Dog) : XM_542663
HIX0026564
HIT000320216 (
NM_206937
)
(DNA ligase 4; EC=6.5.1.1; DNA ligase IV; Polydeoxyribonucleotide synthase [ATP] 4;)
genome : 108,859,793 - 108,867,882 (8,090)
query : 1 - 3,976 (3,976/3,994)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.5.1.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, pero 5, nucl 4, cysk 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026564)
HIX0026564
HIT000199226 (
NM_002312
)
(DNA ligase 4; EC=6.5.1.1; DNA ligase IV; Polydeoxyribonucleotide synthase [ATP] 4;)
genome : 108,859,793 - 108,867,130 (7,338)
query : 1 - 4,097 (4,097/4,115)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.5.1.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, pero 5, nucl 4, cysk 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026564)
HIX0026564
HIT000310846 (
ENST00000356922
)
(DNA ligase 4; EC=6.5.1.1; DNA ligase IV; Polydeoxyribonucleotide synthase [ATP] 4;)
genome : 108,859,787 - 108,867,130 (7,344)
query : 1 - 4,103 (4,103/4,103)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.5.1.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, pero 5, nucl 4, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026564)
HIX0026564
HIT000505408 (
ENST00000405925
)
(DNA ligase 4; EC=6.5.1.1; DNA ligase IV; Polydeoxyribonucleotide synthase [ATP] 4;)
genome : 108,859,794 - 108,870,716 (10,923)
query : 1 - 4,058 (4,058/4,058)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.5.1.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, pero 5, nucl 4, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026564)
HIX0026564
HIT000540168 (
ENST00000442234
)
(DNA ligase 4; EC=6.5.1.1; DNA ligase IV; Polydeoxyribonucleotide synthase [ATP] 4;)
genome : 108,859,794 - 108,867,888 (8,095)
query : 1 - 3,953 (3,953/3,953)
2 exons
identity = 0.998
3'(1.000;0.935)5'
coverage = 1.000
EC number :
EC 6.5.1.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, pero 5, nucl 4, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026564)
HIX0026564
HIT000425216
(
AK292419
)
(DNA ligase 4; EC=6.5.1.1; DNA ligase IV; Polydeoxyribonucleotide synthase [ATP] 4;)
genome : 108,859,794 - 108,867,871 (8,078)
query : 1 - 3,884 (3,884/3,884)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.5.1.1
InterPro :
IPR000977 : DNA ligase, ATP-dependent
IPR001357 : BRCT domain
IPR012308 : DNA ligase, ATP-dependent, N-terminal
IPR012309 : DNA ligase, ATP-dependent, C-terminal
IPR012310 : DNA ligase, ATP-dependent, central
IPR012340 : Nucleic acid-binding, OB-fold
IPR016059 : DNA ligase, ATP-dependent, conserved site
IPR021536 : DNA ligase IV domain
GO :
0003677 : Molecular Function : DNA binding
0003909 : Molecular Function : DNA ligase activity
0003910 : Molecular Function : DNA ligase (ATP) activity
0005524 : Molecular Function : ATP binding
0006260 : Biological Process : DNA replication
0006281 : Biological Process : DNA repair
0006310 : Biological Process : DNA recombination
0051103 : Biological Process : DNA ligation involved in DNA repair
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15.5, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026564)
HIX0026564
HIT000323955
(
X83441
)
(DNA ligase 4; EC=6.5.1.1; DNA ligase IV; Polydeoxyribonucleotide synthase [ATP] 4;)
genome : 108,860,565 - 108,867,130 (6,566)
query : 1 - 3,325 (3,325/3,325)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
EC number :
EC 6.5.1.1
InterPro :
IPR000977 : DNA ligase, ATP-dependent
IPR001357 : BRCT domain
IPR012308 : DNA ligase, ATP-dependent, N-terminal
IPR012309 : DNA ligase, ATP-dependent, C-terminal
IPR012310 : DNA ligase, ATP-dependent, central
IPR012340 : Nucleic acid-binding, OB-fold
IPR016059 : DNA ligase, ATP-dependent, conserved site
IPR021536 : DNA ligase IV domain
GO :
0003677 : Molecular Function : DNA binding
0003909 : Molecular Function : DNA ligase activity
0003910 : Molecular Function : DNA ligase (ATP) activity
0005524 : Molecular Function : ATP binding
0006260 : Biological Process : DNA replication
0006281 : Biological Process : DNA repair
0006310 : Biological Process : DNA recombination
0051103 : Biological Process : DNA ligation involved in DNA repair
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 7, pero 5, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026564)
HIX0026564
HIT000433710
(
AK314844
)
(DNA ligase 4; EC=6.5.1.1; DNA ligase IV; Polydeoxyribonucleotide synthase [ATP] 4;)
genome : 108,860,881 - 108,867,871 (6,991)
query : 1 - 2,853 (2,853/2,853)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.5.1.1
InterPro :
IPR000977 : DNA ligase, ATP-dependent
IPR001357 : BRCT domain
IPR012308 : DNA ligase, ATP-dependent, N-terminal
IPR012309 : DNA ligase, ATP-dependent, C-terminal
IPR012310 : DNA ligase, ATP-dependent, central
IPR012340 : Nucleic acid-binding, OB-fold
IPR016059 : DNA ligase, ATP-dependent, conserved site
IPR021536 : DNA ligase IV domain
GO :
0003677 : Molecular Function : DNA binding
0003909 : Molecular Function : DNA ligase activity
0003910 : Molecular Function : DNA ligase (ATP) activity
0005524 : Molecular Function : ATP binding
0006260 : Biological Process : DNA replication
0006281 : Biological Process : DNA repair
0006310 : Biological Process : DNA recombination
0051103 : Biological Process : DNA ligation involved in DNA repair
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, pero 5, nucl 4, cysk 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026564)
HIX0201987
HIT000357178 (
ENST00000375898
)
(Alpha/beta hydrolase domain-containing protein 13; Abhydrolase domain-containing protein 13; EC=3.-.-.-;)
genome : 108,870,727 - 108,886,603 (15,877)
query : 1 - 5,338 (5,338/5,338)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.-.-.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, extr_plas 10, extr 8.5, cyto 5, nucl 3,
E.R. 3, cyto_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201987)
HIX0201987
HIT000210946 (
NM_032859
)
(Alpha/beta hydrolase domain-containing protein 13; Abhydrolase domain-containing protein 13; EC=3.-.-.-;)
genome : 108,870,763 - 108,886,603 (15,841)
query : 1 - 5,302 (5,302/5,316)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.-.-.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, extr_plas 10, extr 8.5, cyto 5, nucl 3,
E.R. 3, cyto_pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201987)
HIX0201987
HIT000082230
(
AK075195
)
(Alpha/beta hydrolase domain-containing protein 13; Abhydrolase domain-containing protein 13; EC=3.-.-.-;)
genome : 108,870,817 - 108,883,259 (12,443)
query : 1 - 1,904 (1,904/1,904)
2 exons
identity = 0.997
5'(1.000;0.996)3'
coverage = 1.000
EC number :
EC 3.-.-.-
InterPro :
IPR029058 : Alpha/Beta hydrolase fold
IPR029059 : Alpha/beta hydrolase fold-5
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 6, extr 3, mito 1, lyso 1, cysk 1,
golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201987)
HIX0201987
HIT000050776
(
BC022566
)
Representative transcript
(Alpha/beta hydrolase domain-containing protein 13; Abhydrolase domain-containing protein 13; EC=3.-.-.-;)
genome : 108,870,847 - 108,883,260 (12,414)
query : 1 - 1,875 (1,875/1,905)
2 exons
identity = 0.999
5'(0.994;1.000)3'
coverage = 1.000
EC number :
EC 3.-.-.-
InterPro :
IPR029058 : Alpha/Beta hydrolase fold
IPR029059 : Alpha/beta hydrolase fold-5
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, extr_plas 10, extr 8.5, cyto 5, nucl 3,
E.R. 3, cyto_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201987)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB174250
Gallus
sp. (Chicken) : AJ720416
Mus
sp. (Mouse) : AK044407
Bos
sp. (Cow) : ENSBTAT00000003149
Canis
sp. (Dog) : ENSCAFT00000009726
Oryzias
sp. (Medaka) : ENSORLT00000022497
Pongo
sp. (Orangutan) : ENSPPYT00000006508
Pan
sp. (Chimpanzee) : ENSPTRT00000011061
Tetraodon
sp. (Tetraodon) : GSTENT00026010001
Takifugu
sp. (Fugu) : SINFRUT00000159682
Rattus
sp. (Rat) : XM_001076411
Monodelphis
sp. (Opossum) : XM_001365247
Equus
sp. (Horse) : XM_001495972
HIX0201987
HIT000044737
(
AK124864
)
(Alpha/beta hydrolase domain-containing protein 13; Abhydrolase domain-containing protein 13; EC=3.-.-.-;)
genome : 108,880,900 - 108,883,256 (2,357)
query : 1 - 2,357 (2,357/2,357)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 3.-.-.-
InterPro :
IPR029058 : Alpha/Beta hydrolase fold
IPR029059 : Alpha/beta hydrolase fold-5
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, extr_plas 10, extr 8.5, cyto 5, nucl 3,
E.R. 3, cyto_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201987)
HIX0201987
HIT000056075
(
BX647428
)
(Alpha/beta hydrolase domain-containing protein 13.)
genome : 108,881,722 - 108,886,589 (4,868)
query : 1 - 4,866 (4,866/4,891)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.999
InterPro :
IPR029058 : Alpha/Beta hydrolase fold
IPR029059 : Alpha/beta hydrolase fold-5
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cysk 11, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201987)
HIX0201987
HIT000011084
(
AK027812
)
(Alpha/beta hydrolase domain-containing protein 13.)
genome : 108,881,845 - 108,884,336 (2,492)
query : 1 - 2,492 (2,492/2,492)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR029058 : Alpha/Beta hydrolase fold
IPR029059 : Alpha/beta hydrolase fold-5
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14.5, nucl 6.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201987)
HIX0201987
HIT000264184
(
BC070226
)
(Alpha/beta hydrolase domain-containing protein 13.)
genome : 108,881,845 - 108,883,258 (1,414)
query : 1 - 1,414 (1,414/1,445)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.999
InterPro :
IPR029058 : Alpha/Beta hydrolase fold
IPR029059 : Alpha/beta hydrolase fold-5
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14.5, nucl 6.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201987)
HIX0201987
HIT000089642
(
BC018608
)
(Conserved hypothetical protein.)
genome : 108,884,286 - 108,886,603 (2,318)
query : 1 - 2,318 (2,318/2,332)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201987)
HIX0011450
HIT000590254 (
ENST00000486502
)
(Hypothetical short protein.)
genome : 108,903,588 - 108,922,765 (19,178)
query : 1 - 395 (395/395)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, extr 6, cyto 4, mito 4, cyto_mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011450)
HIX0011450
HIT000203164 (
NM_006573
)
(Tumor necrosis factor ligand superfamily member 13B; B lymphocyte stimulator; BLyS; B-cell-activating factor; BAFF; Dendritic cell-derived TNF-like molecule; TNF- and APOL-related leukocyte expressed ligand 1; TALL-1; AltName: CD_antigen=CD257; Contains: Tumor necrosis factor ligand superfamily member 13b, membrane form; Contains: Tumor necrosis factor ligand superfamily member 13b, soluble form;)
genome : 108,921,977 - 108,960,832 (38,856)
query : 1 - 2,671 (2,671/2,675)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, plas 7, cyto_mito 7, extr_plas 6, extr 3,
nucl 3, golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011450)
HIX0011450
HIT000561438 (
NM_001145645
)
(Tumor necrosis factor ligand superfamily member 13B isoform 2.)
genome : 108,921,977 - 108,960,832 (38,856)
query : 1 - 2,614 (2,614/2,618)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, cyto_mito 7.5, plas 6, extr_plas 5.5,
extr 3, nucl 3, golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011450)
HIX0011450
HIT000528493 (
ENST00000430559
)
(Tumor necrosis factor ligand superfamily member 13B isoform 2.)
genome : 108,921,977 - 108,959,365 (37,389)
query : 1 - 1,147 (1,147/1,147)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, cyto_mito 7.5, plas 6, extr_plas 5.5,
extr 3, nucl 3, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011450)
HIX0011450
HIT000038888
(
BC020674
)
Representative transcript
(Tumor necrosis factor ligand superfamily member 13B; B lymphocyte stimulator; BLyS; B-cell-activating factor; BAFF; Dendritic cell-derived TNF-like molecule; TNF- and APOL-related leukocyte expressed ligand 1; TALL-1; AltName: CD_antigen=CD257; Contains: Tumor necrosis factor ligand superfamily member 13b, membrane form; Contains: Tumor necrosis factor ligand superfamily member 13b, soluble form;)
genome : 108,922,066 - 108,959,357 (37,292)
query : 2 - 1,108 (1,107/1,136)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.995)3'
coverage = 0.999
InterPro :
IPR006052 : Tumour necrosis factor domain
IPR008983 : Tumour necrosis factor-like domain
GO :
0005164 : Molecular Function : tumor necrosis factor receptor binding
0005515 : Molecular Function : protein binding
0006955 : Biological Process : immune response
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, plas 7, cyto_mito 7, extr_plas 6, extr 3,
nucl 3, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011450)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ721035
Mus
sp. (Mouse) : AK034121
Tetraodon
sp. (Tetraodon) : CR698229
Equus
sp. (Horse) : ENSECAT00000021044
Oryzias
sp. (Medaka) : ENSORLT00000022501
Pongo
sp. (Orangutan) : ENSPPYT00000006509
Bos
sp. (Cow) : EU213012
Canis
sp. (Dog) : FJ793193
Rattus
sp. (Rat) : XM_001067576
Macaca
sp. (Macaque) : XM_001082247
Pan
sp. (Chimpanzee) : XM_001135794
Monodelphis
sp. (Opossum) : XM_001375771
HIX0011450
HIT000357167 (
ENST00000375887
)
(Tumor necrosis factor ligand superfamily member 13B; B lymphocyte stimulator; BLyS; B-cell-activating factor; BAFF; Dendritic cell-derived TNF-like molecule; TNF- and APOL-related leukocyte expressed ligand 1; TALL-1; AltName: CD_antigen=CD257; Contains: Tumor necrosis factor ligand superfamily member 13b, membrane form; Contains: Tumor necrosis factor ligand superfamily member 13b, soluble form;)
genome : 108,922,066 - 108,960,832 (38,767)
query : 1 - 2,582 (2,582/2,582)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, plas 7, cyto_mito 7, extr_plas 6, extr 3,
nucl 3, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011450)
HIX0011450
HIT000252925
(
AY358881
)
(Tumor necrosis factor ligand superfamily member 13B; B lymphocyte stimulator; BLyS; B-cell-activating factor; BAFF; Dendritic cell-derived TNF-like molecule; TNF- and APOL-related leukocyte expressed ligand 1; TALL-1; AltName: CD_antigen=CD257; Contains: Tumor necrosis factor ligand superfamily member 13b, membrane form; Contains: Tumor necrosis factor ligand superfamily member 13b, soluble form;)
genome : 108,922,075 - 108,959,365 (37,291)
query : 1 - 1,106 (1,106/1,121)
6 exons
identity = 0.999
5'(0.998;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006052 : Tumour necrosis factor domain
IPR008983 : Tumour necrosis factor-like domain
GO :
0005164 : Molecular Function : tumor necrosis factor receptor binding
0005515 : Molecular Function : protein binding
0006955 : Biological Process : immune response
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, plas 7, cyto_mito 7, extr_plas 6, extr 3,
nucl 3, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011450)
HIX0011450
HIT000428495
(
AK309629
)
(Tumor necrosis factor ligand superfamily member 13B; B-cell-activating factor; BAFF; AltName: CD_antigen=CD257; Contains: Tumor necrosis factor ligand superfamily member 13b, membrane form; Contains: Tumor necrosis factor ligand superfamily member 13b, soluble form;)
genome : 108,922,076 - 108,959,315 (37,240)
query : 1 - 924 (924/924)
7 exons
identity = 0.988
5'(1.000;0.905;1.000;1.000;0.982;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006052 : Tumour necrosis factor domain
IPR008983 : Tumour necrosis factor-like domain
GO :
0005164 : Molecular Function : tumor necrosis factor receptor binding
0005515 : Molecular Function : protein binding
0006955 : Biological Process : immune response
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 11, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011450)
HIX0011450
HIT000072905
(
AF186114
)
(Tumor necrosis factor ligand superfamily member 13B; B lymphocyte stimulator; BLyS; B-cell-activating factor; BAFF; Dendritic cell-derived TNF-like molecule; TNF- and APOL-related leukocyte expressed ligand 1; TALL-1; AltName: CD_antigen=CD257; Contains: Tumor necrosis factor ligand superfamily member 13b, membrane form; Contains: Tumor necrosis factor ligand superfamily member 13b, soluble form;)
genome : 108,922,087 - 108,959,365 (37,279)
query : 1 - 1,094 (1,094/1,094)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006052 : Tumour necrosis factor domain
IPR008983 : Tumour necrosis factor-like domain
GO :
0005164 : Molecular Function : tumor necrosis factor receptor binding
0005515 : Molecular Function : protein binding
0006955 : Biological Process : immune response
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, plas 7, cyto_mito 7, extr_plas 6, extr 3,
nucl 3, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011450)
HIX0011450
HIT000071016
(
AF134715
)
(Tumor necrosis factor ligand superfamily member 13B; B lymphocyte stimulator; BLyS; B-cell-activating factor; BAFF; Dendritic cell-derived TNF-like molecule; TNF- and APOL-related leukocyte expressed ligand 1; TALL-1; AltName: CD_antigen=CD257; Contains: Tumor necrosis factor ligand superfamily member 13b, membrane form; Contains: Tumor necrosis factor ligand superfamily member 13b, soluble form;)
genome : 108,922,100 - 108,959,365 (37,266)
query : 1 - 1,081 (1,081/1,101)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006052 : Tumour necrosis factor domain
IPR008983 : Tumour necrosis factor-like domain
GO :
0005164 : Molecular Function : tumor necrosis factor receptor binding
0005515 : Molecular Function : protein binding
0006955 : Biological Process : immune response
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, plas 7, cyto_mito 7, extr_plas 6, extr 3,
nucl 3, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011450)
HIX0011450
HIT000070897
(
AF132600
)
(Tumor necrosis factor ligand superfamily member 13B; B lymphocyte stimulator; BLyS; B-cell-activating factor; BAFF; Dendritic cell-derived TNF-like molecule; TNF- and APOL-related leukocyte expressed ligand 1; TALL-1; AltName: CD_antigen=CD257; Contains: Tumor necrosis factor ligand superfamily member 13b, membrane form; Contains: Tumor necrosis factor ligand superfamily member 13b, soluble form;)
genome : 108,922,108 - 108,959,365 (37,258)
query : 1 - 1,073 (1,073/1,090)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006052 : Tumour necrosis factor domain
IPR008983 : Tumour necrosis factor-like domain
GO :
0005164 : Molecular Function : tumor necrosis factor receptor binding
0005515 : Molecular Function : protein binding
0006955 : Biological Process : immune response
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, plas 7, cyto_mito 7, extr_plas 6, extr 3,
nucl 3, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011450)
HIX0011450
HIT000069926
(
AF116456
)
(Tumor necrosis factor ligand superfamily member 13B; B lymphocyte stimulator; BLyS; B-cell-activating factor; BAFF; Dendritic cell-derived TNF-like molecule; TNF- and APOL-related leukocyte expressed ligand 1; TALL-1; AltName: CD_antigen=CD257; Contains: Tumor necrosis factor ligand superfamily member 13b, membrane form; Contains: Tumor necrosis factor ligand superfamily member 13b, soluble form;)
genome : 108,922,127 - 108,959,362 (37,236)
query : 2 - 1,052 (1,051/1,052)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR006052 : Tumour necrosis factor domain
IPR008983 : Tumour necrosis factor-like domain
GO :
0005164 : Molecular Function : tumor necrosis factor receptor binding
0005515 : Molecular Function : protein binding
0006955 : Biological Process : immune response
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, plas 7, cyto_mito 7, extr_plas 6, extr 3,
nucl 3, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011450)
HIX0011450
HIT000071074
(
AF136293
)
(Tumor necrosis factor ligand superfamily member 13B; B lymphocyte stimulator; BLyS; B-cell-activating factor; BAFF; Dendritic cell-derived TNF-like molecule; TNF- and APOL-related leukocyte expressed ligand 1; TALL-1; AltName: CD_antigen=CD257; Contains: Tumor necrosis factor ligand superfamily member 13b, membrane form; Contains: Tumor necrosis factor ligand superfamily member 13b, soluble form;)
genome : 108,922,244 - 108,959,286 (37,043)
query : 1 - 858 (858/858)
6 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006052 : Tumour necrosis factor domain
IPR008983 : Tumour necrosis factor-like domain
GO :
0005164 : Molecular Function : tumor necrosis factor receptor binding
0005515 : Molecular Function : protein binding
0006955 : Biological Process : immune response
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, plas 7, cyto_mito 7, extr_plas 6, extr 3,
nucl 3, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011450)
HIX0011450
HIT000084618
(
AY129225
)
(Tumor necrosis factor ligand superfamily member 13B; B lymphocyte stimulator; BLyS; B-cell-activating factor; BAFF; Dendritic cell-derived TNF-like molecule; TNF- and APOL-related leukocyte expressed ligand 1; TALL-1; AltName: CD_antigen=CD257; Contains: Tumor necrosis factor ligand superfamily member 13b, membrane form; Contains: Tumor necrosis factor ligand superfamily member 13b, soluble form;)
genome : 108,922,244 - 108,959,286 (37,043)
query : 1 - 858 (858/858)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006052 : Tumour necrosis factor domain
IPR008983 : Tumour necrosis factor-like domain
GO :
0005164 : Molecular Function : tumor necrosis factor receptor binding
0005515 : Molecular Function : protein binding
0006955 : Biological Process : immune response
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, plas 7, cyto_mito 7, extr_plas 6, extr 3,
nucl 3, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011450)
HIX0011450
HIT000251540
(
AY302751
)
(Tumor necrosis factor ligand superfamily member 13B isoform 2.)
genome : 108,922,244 - 108,959,286 (37,043)
query : 1 - 801 (801/801)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006052 : Tumour necrosis factor domain
IPR008983 : Tumour necrosis factor-like domain
GO :
0005164 : Molecular Function : tumor necrosis factor receptor binding
0005515 : Molecular Function : protein binding
0006955 : Biological Process : immune response
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, cyto_mito 7.5, plas 6, extr_plas 5.5,
extr 3, nucl 3, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011450)
HIX0011450
HIT000268689
(
CR541818
)
(Tumor necrosis factor ligand superfamily member 13B; B lymphocyte stimulator; BLyS; B-cell-activating factor; BAFF; Dendritic cell-derived TNF-like molecule; TNF- and APOL-related leukocyte expressed ligand 1; TALL-1; AltName: CD_antigen=CD257; Contains: Tumor necrosis factor ligand superfamily member 13b, membrane form; Contains: Tumor necrosis factor ligand superfamily member 13b, soluble form;)
genome : 108,922,244 - 108,959,286 (37,043)
query : 1 - 858 (858/858)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006052 : Tumour necrosis factor domain
IPR008983 : Tumour necrosis factor-like domain
GO :
0005164 : Molecular Function : tumor necrosis factor receptor binding
0005515 : Molecular Function : protein binding
0006955 : Biological Process : immune response
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, plas 7, cyto_mito 7, extr_plas 6, extr 3,
nucl 3, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011450)
HIX0011450
HIT000641181 (
ENST00000542136
)
(Tumor necrosis factor ligand superfamily member 13B; B lymphocyte stimulator; BLyS; B-cell-activating factor; BAFF; Dendritic cell-derived TNF-like molecule; TNF- and APOL-related leukocyte expressed ligand 1; TALL-1; AltName: CD_antigen=CD257; Contains: Tumor necrosis factor ligand superfamily member 13b, membrane form; Contains: Tumor necrosis factor ligand superfamily member 13b, soluble form;)
genome : 108,922,244 - 108,939,209 (16,966)
query : 1 - 483 (483/495)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.976
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9.5, plas 8, extr_plas 7.5, cyto_mito 6.5,
extr 5, nucl 4, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011450)
HIX0011450
HIT000650062
(
HM636064
)
(Tumor necrosis factor ligand superfamily member 13B; B lymphocyte stimulator; BLyS; B-cell-activating factor; BAFF; Dendritic cell-derived TNF-like molecule; TNF- and APOL-related leukocyte expressed ligand 1; TALL-1; AltName: CD_antigen=CD257; Contains: Tumor necrosis factor ligand superfamily member 13b, membrane form; Contains: Tumor necrosis factor ligand superfamily member 13b, soluble form;)
genome : 108,922,244 - 108,939,209 (16,966)
query : 1 - 483 (483/495)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.976
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9.5, plas 8, extr_plas 7.5, cyto_mito 6.5,
extr 5, nucl 4, mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011450)
HIX0011450
HIT000084619
(
AY129226
)
(Tumor necrosis factor ligand superfamily member 13B; B lymphocyte stimulator; BLyS; B-cell-activating factor; BAFF; Dendritic cell-derived TNF-like molecule; TNF- and APOL-related leukocyte expressed ligand 1; TALL-1; AltName: CD_antigen=CD257; Contains: Tumor necrosis factor ligand superfamily member 13b, membrane form; Contains: Tumor necrosis factor ligand superfamily member 13b, soluble form;)
genome : 108,922,475 - 108,959,286 (36,812)
query : 1 - 627 (627/627)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.991)3'
coverage = 1.000
InterPro :
IPR006052 : Tumour necrosis factor domain
IPR008983 : Tumour necrosis factor-like domain
GO :
0005164 : Molecular Function : tumor necrosis factor receptor binding
0005515 : Molecular Function : protein binding
0006955 : Biological Process : immune response
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 16.5, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011450)
HIX0011450
HIT000583501 (
ENST00000479435
)
(Tumor necrosis factor ligand superfamily member 13B; B lymphocyte stimulator; BLyS; B-cell-activating factor; BAFF; Dendritic cell-derived TNF-like molecule; TNF- and APOL-related leukocyte expressed ligand 1; TALL-1; AltName: CD_antigen=CD257; Contains: Tumor necrosis factor ligand superfamily member 13b, membrane form; Contains: Tumor necrosis factor ligand superfamily member 13b, soluble form;)
genome : 108,922,575 - 108,955,952 (33,378)
query : 1 - 637 (637/637)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 12, extr 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011450)
HIX0011450
HIT000084620
(
AY129227
)
(Tumor necrosis factor ligand superfamily member 13B; B lymphocyte stimulator; BLyS; B-cell-activating factor; BAFF; Dendritic cell-derived TNF-like molecule; TNF- and APOL-related leukocyte expressed ligand 1; TALL-1; AltName: CD_antigen=CD257; Contains: Tumor necrosis factor ligand superfamily member 13b, membrane form; Contains: Tumor necrosis factor ligand superfamily member 13b, soluble form;)
genome : 108,922,688 - 108,959,286 (36,599)
query : 7 - 525 (519/525)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.991)3'
coverage = 0.989
InterPro :
IPR006052 : Tumour necrosis factor domain
IPR008983 : Tumour necrosis factor-like domain
GO :
0005164 : Molecular Function : tumor necrosis factor receptor binding
0005515 : Molecular Function : protein binding
0006955 : Biological Process : immune response
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 7, nucl 5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011450)
HIX0011450
HIT000084621
(
AY129228
)
(Tumor necrosis factor ligand superfamily member 13B; B lymphocyte stimulator; BLyS; B-cell-activating factor; BAFF; Dendritic cell-derived TNF-like molecule; TNF- and APOL-related leukocyte expressed ligand 1; TALL-1; AltName: CD_antigen=CD257; Contains: Tumor necrosis factor ligand superfamily member 13b, membrane form; Contains: Tumor necrosis factor ligand superfamily member 13b, soluble form;)
genome : 108,922,730 - 108,959,286 (36,557)
query : 1 - 477 (477/477)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.991)3'
coverage = 1.000
InterPro :
IPR006052 : Tumour necrosis factor domain
IPR008983 : Tumour necrosis factor-like domain
GO :
0005164 : Molecular Function : tumor necrosis factor receptor binding
0005515 : Molecular Function : protein binding
0006955 : Biological Process : immune response
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 16.5, nucl 8, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011450)
HIX0171937
HIT000509188 (
ENST00000411245
)
(Non-protein coding transcript.)
genome : 108,953,560 - 108,953,679 (120)
query : 1 - 120 (120/120)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171937)
HIX0011450
HIT000597192 (
ENST00000493765
)
(Tumor necrosis factor ligand superfamily member 13B; B lymphocyte stimulator; BLyS; B-cell-activating factor; BAFF; Dendritic cell-derived TNF-like molecule; TNF- and APOL-related leukocyte expressed ligand 1; TALL-1; AltName: CD_antigen=CD257; Contains: Tumor necrosis factor ligand superfamily member 13b, membrane form; Contains: Tumor necrosis factor ligand superfamily member 13b, soluble form;)
genome : 108,955,654 - 108,959,365 (3,712)
query : 1 - 491 (491/507)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 16, nucl 6.5, extr 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011450)
HIX0171917
HIT000476335 (
ENST00000392864
)
(Conserved hypothetical protein.)
genome : 109,132,574 - 109,134,165 (1,592)
query : 1 - 1,592 (1,592/1,592)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 8, mito_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171917)
HIX0019753
HIT000435583
(
BC146791
)
(Unconventional myosin-XVI; Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 3; Unconventional myosin-16;)
genome : 109,248,500 - 109,860,345 (611,846)
query : 1 - 6,864 (6,864/6,881)
35 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000)3'
coverage = 1.000
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR001609 : Myosin head, motor domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000310661 (
ENST00000356711
)
(Unconventional myosin-XVI; Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 3; Unconventional myosin-16;)
genome : 109,248,500 - 109,860,355 (611,856)
query : 1 - 6,874 (6,874/6,874)
35 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000366858 (
NM_015011
)
(Unconventional myosin-XVI; Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 3; Unconventional myosin-16;)
genome : 109,248,500 - 109,860,355 (611,856)
query : 1 - 6,874 (6,874/6,874)
35 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000000582
(
AB020672
)
Representative transcript
(Unconventional myosin-XVI; Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 3; Unconventional myosin-16;)
genome : 109,248,500 - 109,860,345 (611,846)
query : 1 - 6,864 (6,864/6,864)
35 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AY004215
Mus
sp. (Mouse) : BC082311
Equus
sp. (Horse) : ENSECAT00000007296
Oryzias
sp. (Medaka) : ENSORLT00000022516
Pongo
sp. (Orangutan) : ENSPPYT00000006510
Tetraodon
sp. (Tetraodon) : GSTENT00026008001
Takifugu
sp. (Fugu) : SINFRUT00000159679
Macaca
sp. (Macaque) : XM_001085293
Monodelphis
sp. (Opossum) : XM_001375684
Danio
sp. (Zebrafish) : XM_001920923
Pan
sp. (Chimpanzee) : XM_509728
Canis
sp. (Dog) : XM_542665
Bos
sp. (Cow) : XR_027581
HIX0019753
HIT000029177
(
AL834447
)
(Unconventional myosin-XVI isoform 2.)
genome : 109,248,530 - 109,701,313 (452,784)
query : 1 - 3,529 (3,529/3,598)
25 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000)3'
coverage = 1.000
InterPro :
IPR001609 : Myosin head, motor domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000409104
(
AB290159
)
(Unconventional myosin-XVI; Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 3; Unconventional myosin-16;)
genome : 109,281,570 - 109,860,345 (578,776)
query : 1 - 7,427 (7,427/7,427)
35 exons
identity = 0.999
5'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000)3'
coverage = 1.000
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR001609 : Myosin head, motor domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000656368 (
NM_001198950
)
(Unconventional myosin-XVI; Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 3; Unconventional myosin-16;)
genome : 109,281,571 - 109,860,355 (578,785)
query : 1 - 7,436 (7,436/7,436)
35 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000047679_03
(
AK127806
)
(Unconventional myosin-XVI isoform 1.)
genome : 109,281,571 - 109,704,826 (423,256)
query : 1 - 3,674 (3,674/3,676)
25 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001609 : Myosin head, motor domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000311386 (
ENST00000357550
)
(Unconventional myosin-XVI; Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 3; Unconventional myosin-16;)
genome : 109,318,231 - 109,860,341 (542,111)
query : 1 - 6,775 (6,775/6,775)
34 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000106094 (
ENST00000251041
)
(Unconventional myosin-XVI isoform 1.)
genome : 109,318,231 - 109,701,313 (383,083)
query : 1 - 3,475 (3,475/3,492)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000572241 (
ENST00000467639
)
(Conserved hypothetical protein.)
genome : 109,431,890 - 109,438,088 (6,199)
query : 1 - 617 (617/617)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 11, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000357137 (
ENST00000375857
)
(Unconventional myosin-XVI isoform 2.)
genome : 109,445,864 - 109,708,405 (262,542)
query : 1 - 3,121 (3,121/3,121)
22 exons
identity = 0.999
5'(1.000;0.977;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000020546
(
AK095691
)
(Unconventional myosin-XVI isoform 2.)
genome : 109,445,928 - 109,708,405 (262,478)
query : 1 - 3,117 (3,117/3,117)
22 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001609 : Myosin head, motor domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000586709 (
ENST00000482793
)
(Unconventional myosin-XVI isoform 2.)
genome : 109,507,644 - 109,540,825 (33,182)
query : 1 - 475 (475/475)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13, cyto 9, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000497557
(
AK302933
)
(Unconventional myosin-XVI isoform 2.)
genome : 109,538,495 - 109,780,039 (241,545)
query : 1 - 2,955 (2,955/2,955)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR001609 : Myosin head, motor domain
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000555445 (
ENST00000457511
)
(Unconventional myosin-XVI isoform 2.)
genome : 109,538,517 - 109,780,039 (241,523)
query : 1 - 2,933 (2,933/2,933)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
AL138914.9
108000001-108012677 F +
NCBI
AL445649.15
108012678-108202703 F +
NCBI
AL137219.11
108202704-108234365 F +
NCBI
AL138710.16
108234366-108300546 F +
NCBI
AL359831.9
108300547-108365767 F +
NCBI
AL136964.8
108365768-108537658 F +
NCBI
AL359436.14
108537659-108597168 F +
NCBI
AL139189.14
108597169-108714563 F +
NCBI
AL354985.16
108714564-108854390 F +
NCBI
AL157762.13
108854391-109039519 F +
NCBI
AL138694.18
109039520-109196683 F +
NCBI
AL512648.21
109196684-109256481 F +
NCBI
AL157771.11
109256482-109369624 F +
NCBI
AL136132.15
109369625-109543362 F -
NCBI
AL390918.7
109543363-109600000 F +
NCBI