bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0020751
HIT000026409
(
AL390167
)
(Conserved hypothetical protein.)
genome : 25,498,812 - 25,500,622 (1,811)
query : 1 - 839 (839/967)
2 exons
identity = 0.999
3'(0.998)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, mito_pero 11.5, extr 7, pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020751)
HIX0020751
HIT000532034 (
ENST00000434100
)
(Conserved hypothetical protein.)
genome : 25,498,815 - 25,542,415 (43,601)
query : 1 - 514 (514/514)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 6.5, cyto_nucl 5.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020751)
HIX0020751
HIT000011602
(
AK054988
)
(Hypothetical protein.)
genome : 25,498,815 - 25,501,871 (3,057)
query : 1 - 2,085 (2,085/2,085)
2 exons
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12.5, mito 10.5, E.R._mito 9, extr_plas 7,
pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020751)
HIX0020751
HIT000562920 (
NR_026730
)
(Poly [ADP-ribose] polymerase 4; PARP-4; EC=2.4.2.30; 193 kDa vault protein; ADP-ribosyltransferase diphtheria toxin-like 4; ARTD4; PARP-related/IalphaI-related H5/proline-rich; PH5P; Vault poly(ADP-ribose) polymerase; VPARP;)
genome : 25,502,893 - 25,542,607 (39,715)
query : 1 - 6,477 (6,477/6,477)
5 exons
identity = 0.999
3'(1.000;0.968;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, mito 7, E.R._mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020751)
HIX0020751
HIT000046201
(
AK126328
)
(Poly [ADP-ribose] polymerase 4; PARP-4; EC=2.4.2.30; 193 kDa vault protein; ADP-ribosyltransferase diphtheria toxin-like 4; ARTD4; PARP-related/IalphaI-related H5/proline-rich; PH5P; Vault poly(ADP-ribose) polymerase; VPARP;)
genome : 25,505,459 - 25,512,185 (6,727)
query : 1 - 3,814 (3,814/3,814)
2 exons
identity = 0.992
3'(0.991;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020751)
HIX0020751
HIT000019079
(
AK094224
)
(Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 isoform C2.)
genome : 25,507,882 - 25,542,610 (34,729)
query : 1 - 1,710 (1,710/1,710)
5 exons
identity = 0.996
3'(0.998;0.993;0.977;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.67
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000008 : C2 domain
IPR014020 : Tensin phosphatase, C2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 10.8333, nucl 8.5, cyto 8,
cyto_pero 5.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020751)
Ortholog candidate ( ->
Evola
)
Equus
sp. (Horse) : ENSECAT00000008826
Pongo
sp. (Orangutan) : ENSPPYT00000006176
HIX0020751
HIT000492094
(
AK297470
)
Representative transcript
(Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 isoform C2.)
genome : 25,508,130 - 25,542,607 (34,478)
query : 1 - 1,231 (1,231/1,231)
5 exons
identity = 0.983
3'(0.993;0.960;1.000;0.989;0.962)5'
coverage = 1.000
EC number :
EC 3.1.3.67
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000008 : C2 domain
IPR014020 : Tensin phosphatase, C2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 6.5, E.R._mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020751)
HIX0020751
HIT000527632 (
ENST00000429698
)
(Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 isoform C2.)
genome : 25,514,740 - 25,542,625 (27,886)
query : 1 - 770 (770/770)
5 exons
identity = 0.996
3'(1.000;0.977;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.67
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, mito 7, E.R._mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020751)
HIX0172066
HIT000605655_01 (
ENST00000505530
)
(Mitochondrial carrier domain containing protein.)
genome : 25,517,713 - 25,518,636 (924)
query : 1 - 290 (290/290)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 10, cyto_nucl 9.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172066)
HIX0172066
HIT000607991_01 (
ENST00000508033
)
(Mitochondrial carrier domain containing protein.)
genome : 25,517,746 - 25,518,632 (887)
query : 1 - 253 (253/253)
2 exons
identity = 0.972
5'(0.970;0.975)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_pero 11.3333, cyto_nucl 10.6667, extr 6,
pero 5, mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172066)
HIX0020751
HIT000533190 (
ENST00000435256
)
(Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 isoform delta.)
genome : 25,525,526 - 25,541,592 (16,067)
query : 1 - 593 (593/593)
7 exons
identity = 0.978
3'(1.000;0.983;0.942;0.975;0.990;0.965;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.67
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8, mito 7, extr 6, cyto_nucl 6, cysk 5,
cyto_golg 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020751)
HIX0020751
HIT000050253
(
AK130982
)
(Hypothetical short protein.)
genome : 25,528,635 - 25,529,135 (501)
query : 1 - 501 (501/501)
1 exon
identity = 0.988
3'(0.988)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020751)
HIX0037502
HIT000094948
(
BC037822
)
Representative transcript
(Conserved hypothetical protein.)
genome : 25,533,252 - 25,534,531 (1,280)
query : 5 - 1,284 (1,280/1,298)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 11.5, nucl 11, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037502)
HIX0020751
HIT000363149 (
ENST00000381871
)
(Conserved hypothetical protein.)
genome : 25,541,380 - 25,542,593 (1,214)
query : 1 - 462 (462/462)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 7, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020751)
HIX0172082
HIT000526744 (
ENST00000428810
)
(Ribosomal protein L34Ae family protein.)
genome : 25,562,715 - 25,563,063 (349)
query : 1 - 349 (349/349)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172082)
HIX0192628
HIT000711575_03 (
ENST00000599825
)
(Caldesmon/lymphocyte specific protein family protein.)
genome : 25,591,541 - 25,591,675 (135)
query : 1 - 135 (135/135)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, extr 3, cyto_nucl 3, nucl 2.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192628)
HIX0192628
HIT000583124_03 (
ENST00000479042
)
(Non-protein coding transcript.)
genome : 25,591,541 - 25,591,673 (133)
query : 1 - 133 (133/133)
1 exon
identity = 0.955
5'(0.955)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192628)
HIX0192628
pHIT000112539 ( pHIT000112539 )
Representative transcript
(Conserved hypothetical protein.)
genome : 25,591,595 - 25,606,596 (15,002)
query : 1 - 687 (687/687)
2 exons
InterPro :
IPR013258 : Striatin, N-terminal
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192628)
CAGE tag :
T13F0175ADFC
HIX0171900
HIT000442704_04
(
DQ576173
)
Representative transcript
(Non-protein coding transcript.)
genome : 25,591,963 - 25,591,993 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171900)
HIX0171908
HIT000454986_04
(
DQ588455
)
Representative transcript
(Non-protein coding transcript.)
genome : 25,592,068 - 25,592,098 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171908)
HIX0130628
HIT000437125
(
DQ570594
)
Representative transcript
(Non-protein coding transcript.)
genome : 25,592,195 - 25,592,225 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130628)
HIX0130767
HIT000449773
(
DQ583242
)
Representative transcript
(Non-protein coding transcript.)
genome : 25,592,589 - 25,592,618 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130767)
HIX0011181
HIT000675888 (
ENST00000562709
)
(Polyadenylate-binding protein 3; PABP-3; Poly(A)-binding protein 3; Testis-specific poly(A)-binding protein;)
genome : 25,670,006 - 25,673,392 (3,387)
query : 1 - 3,387 (3,387/3,387)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011181)
HIX0011181
HIT000682340 (
ENST00000569397
)
(Polyadenylate-binding protein 3; PABP-3; Poly(A)-binding protein 3; Testis-specific poly(A)-binding protein;)
genome : 25,670,006 - 25,673,392 (3,387)
query : 1 - 3,387 (3,387/3,387)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011181)
HIX0011181
HIT000210056 (
NM_030979
)
(Polyadenylate-binding protein 3; PABP-3; Poly(A)-binding protein 3; Testis-specific poly(A)-binding protein;)
genome : 25,670,276 - 25,672,705 (2,430)
query : 1 - 2,430 (2,430/2,430)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011181)
HIX0011181
HIT000025496
(
AL136900
)
(Polyadenylate-binding protein 3.)
genome : 25,670,293 - 25,672,351 (2,059)
query : 1 - 2,058 (2,058/2,107)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR002004 : Polyadenylate-binding protein/Hyperplastic disc protein
IPR006515 : Polyadenylate binding protein, human types 1, 2, 3, 4
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011181)
HIX0011181
HIT000432202
(
AK313336
)
(Polyadenylate-binding protein 3; PABP-3; Poly(A)-binding protein 3; Testis-specific poly(A)-binding protein;)
genome : 25,670,296 - 25,672,232 (1,937)
query : 3 - 1,939 (1,937/1,939)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.999
InterPro :
IPR000504 : RNA recognition motif domain
IPR002004 : Polyadenylate-binding protein/Hyperplastic disc protein
IPR006515 : Polyadenylate binding protein, human types 1, 2, 3, 4
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011181)
HIX0011181
HIT000334027
(
BC045608
)
(Polyadenylate-binding protein 3; PABP-3; Poly(A)-binding protein 3; Testis-specific poly(A)-binding protein;)
genome : 25,670,300 - 25,673,392 (3,093)
query : 1 - 3,093 (3,093/3,108)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR002004 : Polyadenylate-binding protein/Hyperplastic disc protein
IPR006515 : Polyadenylate binding protein, human types 1, 2, 3, 4
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011181)
HIX0011181
HIT000112110 (
ENST00000281589
)
(Polyadenylate-binding protein 3; PABP-3; Poly(A)-binding protein 3; Testis-specific poly(A)-binding protein;)
genome : 25,670,300 - 25,673,389 (3,090)
query : 1 - 3,090 (3,090/3,090)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011181)
HIX0011181
HIT000040293
(
BC027617
)
Representative transcript
(Polyadenylate-binding protein 3; PABP-3; Poly(A)-binding protein 3; Testis-specific poly(A)-binding protein;)
genome : 25,670,310 - 25,672,365 (2,056)
query : 1 - 2,056 (2,056/2,071)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR002004 : Polyadenylate-binding protein/Hyperplastic disc protein
IPR006515 : Polyadenylate binding protein, human types 1, 2, 3, 4
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011181)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC063948
Gallus
sp. (Chicken) : ENSGALT00000023333
Oryzias
sp. (Medaka) : ENSORLT00000003356
Takifugu
sp. (Fugu) : SINFRUT00000147841
Rattus
sp. (Rat) : XM_001069283
Macaca
sp. (Macaque) : XM_001090892
Monodelphis
sp. (Opossum) : XM_001367383
Pan
sp. (Chimpanzee) : XM_509589
HIX0011181
HIT000070869
(
AF132026
)
(Polyadenylate-binding protein 3; PABP-3; Poly(A)-binding protein 3; Testis-specific poly(A)-binding protein;)
genome : 25,670,314 - 25,672,705 (2,392)
query : 1 - 2,397 (2,397/2,397)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR002004 : Polyadenylate-binding protein/Hyperplastic disc protein
IPR006515 : Polyadenylate binding protein, human types 1, 2, 3, 4
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011181)
HIX0037372
HIT000221755
(
U82311
)
Representative transcript
(Conserved hypothetical protein.)
genome : 25,715,674 - 25,715,947 (274)
query : 1 - 274 (274/274)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, extr 8, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037372)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000029308
Pan
sp. (Chimpanzee) : ENSPTRT00000060283
HIX0037372
HIT000221753
(
U82306
)
(Conserved hypothetical protein.)
genome : 25,715,794 - 25,716,046 (253)
query : 1 - 253 (253/253)
1 exon
identity = 0.992
5'(0.992)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037372)
HIX0037372
HIT000644065 (
ENST00000545020
)
(Conserved hypothetical protein.)
genome : 25,715,794 - 25,716,046 (253)
query : 1 - 247 (247/247)
1 exon
identity = 0.976
5'(0.976)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 3, cyto 2, mito 2, lyso 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037372)
HIX0011182
HIT000098114
(
BC045677
)
(Conserved hypothetical protein.)
genome : 25,735,818 - 25,738,409 (2,592)
query : 1 - 2,591 (2,591/2,606)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011182)
HIX0011182
HIT000027498
(
AL832586
)
(Conserved hypothetical protein.)
genome : 25,735,826 - 25,741,836 (6,011)
query : 1 - 6,011 (6,011/6,024)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, plas 9, pero 4, E.R._mito 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011182)
HIX0011182
HIT000311618 (
ENST00000357816
)
(APC membrane recruitment protein 2; Amer2; Protein FAM123A;)
genome : 25,735,822 - 25,746,426 (10,605)
query : 1 - 10,055 (10,055/10,055)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 15.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011182)
HIX0011182
HIT000022908
(
AK098054
)
(Conserved hypothetical protein.)
genome : 25,735,825 - 25,738,002 (2,178)
query : 1 - 2,178 (2,178/2,178)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011182)
HIX0011182
HIT000019233
(
AK094378
)
(Conserved hypothetical protein.)
genome : 25,735,825 - 25,737,609 (1,785)
query : 1 - 1,785 (1,785/1,785)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011182)
HIX0011182
HIT000027539
(
AL832627
)
(APC membrane recruitment protein 2 isoform 2.)
genome : 25,739,029 - 25,744,447 (5,419)
query : 28 - 5,449 (5,422/5,470)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 0.995
InterPro :
IPR019003 : Uncharacterised protein family FAM123
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011182)
HIX0011182
HIT000011892
(
AK055278
)
(Hypothetical short protein.)
genome : 25,739,031 - 25,741,196 (2,166)
query : 1 - 2,167 (2,167/2,167)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 7.5, nucl 7, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011182)
HIX0011182
HIT000213957 (
NM_152704
)
(APC membrane recruitment protein 2; Amer2; Protein FAM123A;)
genome : 25,742,673 - 25,745,857 (3,185)
query : 1 - 3,185 (3,185/3,198)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15.5, cyto 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011182)
HIX0011182
HIT000319624 (
NM_199138
)
(APC membrane recruitment protein 2 isoform 2.)
genome : 25,742,673 - 25,745,857 (3,185)
query : 1 - 2,828 (2,828/2,841)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 15.5, cyto 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011182)
HIX0011182
HIT000363131 (
ENST00000381853
)
(APC membrane recruitment protein 2 isoform 2.)
genome : 25,742,674 - 25,745,857 (3,184)
query : 1 - 2,827 (2,827/2,827)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 15.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011182)
HIX0011182
HIT000023626
(
AK098796
)
(APC membrane recruitment protein 2 isoform 2.)
genome : 25,743,058 - 25,745,053 (1,996)
query : 1 - 1,639 (1,639/1,639)
2 exons
identity = 0.998
3'(0.998;1.000)5'
coverage = 1.000
InterPro :
IPR019003 : Uncharacterised protein family FAM123
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011182)
HIX0011182
HIT000096664
(
BC041392
)
(APC membrane recruitment protein 2 isoform 2.)
genome : 25,743,232 - 25,746,425 (3,194)
query : 6 - 3,197 (3,192/3,211)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.998
InterPro :
IPR019003 : Uncharacterised protein family FAM123
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011182)
HIX0011182
HIT000614820 (
ENST00000515384
)
(APC membrane recruitment protein 2; Amer2; Protein FAM123A;)
genome : 25,743,229 - 25,746,425 (3,197)
query : 1 - 3,197 (3,197/3,197)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011182)
HIX0011182
HIT000041653
(
BC032653
)
(APC membrane recruitment protein 2 isoform 2.)
genome : 25,743,254 - 25,745,698 (2,445)
query : 4 - 2,088 (2,085/2,102)
2 exons
identity = 0.999
3'(1.000;0.996)5'
coverage = 0.999
InterPro :
IPR019003 : Uncharacterised protein family FAM123
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011182)
HIX0011182
HIT000011663
(
AK055049
)
Representative transcript
(APC membrane recruitment protein 2 isoform 1.)
genome : 25,743,255 - 25,746,305 (3,051)
query : 1 - 2,501 (2,501/2,501)
3 exons
identity = 0.997
3'(0.996;0.998;0.996)5'
coverage = 1.000
InterPro :
IPR019003 : Uncharacterised protein family FAM123
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 15.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011182)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC056350
Danio
sp. (Zebrafish) : BC146746
Macaca
sp. (Macaque) : DQ148094
Pongo
sp. (Orangutan) : ENSPPYT00000006180
Tetraodon
sp. (Tetraodon) : GSTENT00010497001
Rattus
sp. (Rat) : XM_001063071
Pan
sp. (Chimpanzee) : XM_001154774
Monodelphis
sp. (Opossum) : XM_001375738
Gallus
sp. (Chicken) : XM_417133
Bos
sp. (Cow) : XM_864994
HIX0011182
HIT000023173
(
AK098343
)
(APC membrane recruitment protein 2 isoform 2.)
genome : 25,743,255 - 25,745,621 (2,367)
query : 1 - 2,367 (2,367/2,367)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR019003 : Uncharacterised protein family FAM123
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011182)
HIX0037471
HIT000511435 (
ENST00000413501
)
(Hypothetical short protein.)
genome : 25,746,966 - 25,754,217 (7,252)
query : 1 - 1,147 (1,147/1,147)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 12, extr 8, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037471)
HIX0037471
HIT000090651
(
BC022569
)
Representative transcript
(Conserved hypothetical protein.)
genome : 25,749,015 - 25,754,139 (5,125)
query : 1 - 2,196 (2,196/2,212)
2 exons
identity = 0.997
3'(0.997;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 9.5, cyto 6.5, mito_nucl 6.5,
cyto_nucl 5.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037471)
HIX0172312
HIT000563961
(
AB593160
)
Representative transcript
(Conserved hypothetical protein.)
genome : 25,755,470 - 25,764,795 (9,326)
query : 1 - 4,363 (4,363/4,363)
2 exons
identity = 0.992
5'(1.000;0.992)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13, nucl 8, plas 5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172312)
HIX0172312
HIT000555562 (
ENST00000457628
)
(Hypothetical short protein.)
genome : 25,755,579 - 25,763,898 (8,320)
query : 1 - 771 (771/771)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 7, cyto_nucl 5.16667, nucl 4.5,
cyto_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172312)
HIX0037630
HIT000221754
(
U82310
)
Representative transcript
(Hypothetical protein.)
genome : 25,764,201 - 25,764,455 (255)
query : 1 - 255 (255/255)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, extr 9, cyto_nucl 6.66667, nucl 6.5,
cyto 5.5, cyto_pero 4.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037630)
HIX0172148
HIT000533659 (
ENST00000435725
)
(Hypothetical short protein.)
genome : 25,767,245 - 25,784,433 (17,189)
query : 1 - 302 (302/302)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 8, nucl 8, cyto_nucl 7, E.R._mito 7,
mito_pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172148)
HIX0202027
HIT000529068 (
ENST00000431134
)
(Ribosomal protein L25/L23 family protein.)
genome : 25,780,187 - 25,780,644 (458)
query : 1 - 458 (458/458)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202027)
HIX0011183
HIT000018104
(
AK093237
)
Representative transcript
(Myotubularin-related protein 6.)
genome : 25,802,307 - 25,861,704 (59,398)
query : 1 - 2,337 (2,337/2,337)
14 exons
identity = 0.998
3'(0.998;0.992;1.000;0.995;1.000;1.000;0.991;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR010569 : Myotubularin-like phosphatase domain
IPR016130 : Protein-tyrosine phosphatase, active site
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, cyto_nucl 17, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011183)
HIX0011183
HIT000639706 (
ENST00000540661
)
(Myotubularin-related protein 6.)
genome : 25,802,307 - 25,861,704 (59,398)
query : 1 - 2,337 (2,337/2,337)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 17, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011183)
HIX0011183
HIT000201424 (
NM_004685
)
(Myotubularin-related protein 6; EC=3.1.3.-;)
genome : 25,820,342 - 25,861,704 (41,363)
query : 1 - 5,213 (5,213/5,222)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, cyto_nucl 17, nucl 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011183)
HIX0011183
HIT000363079 (
ENST00000381801
)
(Myotubularin-related protein 6; EC=3.1.3.-;)
genome : 25,820,339 - 25,862,147 (41,809)
query : 1 - 5,659 (5,659/5,659)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, cyto_nucl 17, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011183)
HIX0011183
HIT000026929
(
AL832017
)
(Myotubularin-related protein 6; EC=3.1.3.-;)
genome : 25,821,371 - 25,861,627 (40,257)
query : 1 - 4,107 (4,107/4,131)
14 exons
identity = 0.998
3'(0.998;0.992;1.000;1.000;1.000;1.000;0.991;
1.000;1.000;1.000;0.994;0.994;0.991;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.-
InterPro :
IPR010569 : Myotubularin-like phosphatase domain
IPR016130 : Protein-tyrosine phosphatase, active site
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, cyto_nucl 17, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011183)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK076218
Danio
sp. (Zebrafish) : BC044359
Pongo
sp. (Orangutan) : CR860784
Equus
sp. (Horse) : ENSECAT00000000862
Oryzias
sp. (Medaka) : ENSORLT00000008677
Takifugu
sp. (Fugu) : SINFRUT00000134792
Macaca
sp. (Macaque) : XM_001091848
Pan
sp. (Chimpanzee) : XM_001154942
Monodelphis
sp. (Opossum) : XM_001375751
Rattus
sp. (Rat) : XM_224271
Canis
sp. (Dog) : XM_534530
Bos
sp. (Cow) : XM_612221
HIX0011183
HIT000008781
(
AK025507
)
(Myotubularin-related protein 6.)
genome : 25,821,371 - 25,827,956 (6,586)
query : 1 - 2,572 (2,572/2,589)
4 exons
identity = 0.997
3'(0.996;1.000;0.992;1.000)5'
coverage = 1.000
InterPro :
IPR010569 : Myotubularin-like phosphatase domain
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 7, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011183)
HIX0011183
HIT000092446
(
BC031834
)
(Myotubularin-related protein 6.)
genome : 25,821,371 - 25,823,517 (2,147)
query : 1 - 2,147 (2,147/2,163)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 13, extr 7, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011183)
HIX0011183
HIT000093903
(
BC035436
)
(Myotubularin-related protein 6.)
genome : 25,821,371 - 25,823,517 (2,147)
query : 1 - 2,147 (2,147/2,163)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 13, extr 7, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011183)
HIX0011183
HIT000052299
(
BC040012
)
(Myotubularin-related protein 6; EC=3.1.3.-;)
genome : 25,821,371 - 25,861,576 (40,206)
query : 1 - 4,056 (4,056/4,069)
14 exons
identity = 0.999
3'(0.999;0.992;1.000;1.000;1.000;1.000;0.991;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.-
InterPro :
IPR010569 : Myotubularin-like phosphatase domain
IPR016130 : Protein-tyrosine phosphatase, active site
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, cyto_nucl 17, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011183)
HIX0011183
HIT000065919
(
AF072928
)
(Myotubularin-related protein 6.)
genome : 25,821,410 - 25,840,080 (18,671)
query : 1 - 3,359 (3,359/3,382)
10 exons
identity = 0.998
3'(0.999;0.992;1.000;0.990;1.000;0.992;0.991;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR010569 : Myotubularin-like phosphatase domain
IPR016130 : Protein-tyrosine phosphatase, active site
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 10, nucl 5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011183)
HIX0011183
HIT000220029
(
U47635
)
(Myotubularin-related protein 6.)
genome : 25,821,418 - 25,826,122 (4,705)
query : 16 - 2,486 (2,471/2,486)
3 exons
identity = 0.994
3'(0.995;0.992;0.970)5'
coverage = 0.994
InterPro :
IPR010569 : Myotubularin-like phosphatase domain
GO :
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 10.5, extr 6, mito 5, nucl 3,
extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011183)
HIX0011183
HIT000018939
(
AK094082
)
(Myotubularin-related protein 6.)
genome : 25,821,916 - 25,823,922 (2,007)
query : 1 - 2,007 (2,007/2,007)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 9, nucl 5, cyto 3, golg 3, cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011183)
HIX0011183
HIT000433453
(
AK314587
)
(Myotubularin-related protein 6; EC=3.1.3.-;)
genome : 25,823,370 - 25,861,567 (38,198)
query : 3 - 2,050 (2,048/2,050)
14 exons
identity = 0.998
3'(1.000;0.992;1.000;1.000;0.980;1.000;0.991;
1.000;1.000;1.000;0.994;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 3.1.3.-
InterPro :
IPR010569 : Myotubularin-like phosphatase domain
IPR016130 : Protein-tyrosine phosphatase, active site
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 17.5, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011183)
HIX0011183
HIT000079158
(
AF406619
)
(Myotubularin-related protein 6; EC=3.1.3.-;)
genome : 25,823,370 - 25,861,385 (38,016)
query : 1 - 1,866 (1,866/1,866)
14 exons
identity = 0.997
3'(1.000;0.992;1.000;0.990;1.000;0.992;0.991;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.-
InterPro :
IPR010569 : Myotubularin-like phosphatase domain
IPR016130 : Protein-tyrosine phosphatase, active site
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 17.5, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011183)
HIX0011183
HIT000395544
(
EF491817
)
(Conserved hypothetical protein.)
genome : 25,831,927 - 25,834,819 (2,893)
query : 1 - 310 (310/310)
3 exons
identity = 0.955
3'(0.966;0.957;0.946)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 11, extr 10, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011183)
HIX0011183
HIT000586285 (
ENST00000482345
)
(Myotubularin-related protein 6.)
genome : 25,832,759 - 25,835,946 (3,188)
query : 1 - 327 (327/327)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.3333, mito_nucl 9.83333, nucl 9.5,
mito 8.5, cyto 7, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011183)
HIX0011183
HIT000395520
(
EF491793
)
(Myotubularin-related protein 6.)
genome : 25,834,712 - 25,835,920 (1,209)
query : 1 - 229 (229/229)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR010569 : Myotubularin-like phosphatase domain
GO :
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 11.5, nucl 6, extr 4, plas 2,
cysk 2, golg 2, cysk_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011183)
HIX0037469
HIT000088772
(
BC015677
)
Representative transcript
(Hypothetical protein.)
genome : 25,874,262 - 25,875,576 (1,315)
query : 1 - 1,315 (1,315/1,343)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 12.5, mito 5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037469)
HIX0037469
HIT000681816 (
ENST00000568856
)
(Hypothetical protein.)
genome : 25,874,262 - 25,875,576 (1,315)
query : 1 - 1,315 (1,315/1,315)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 12.5, mito 5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037469)
HIX0011184
HIT000363014 (
ENST00000381736
)
(Nucleoporin p58/p45; Nucleoporin-like protein 1;)
genome : 25,875,662 - 25,916,544 (40,883)
query : 1 - 4,322 (4,322/4,322)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 13, cyto_nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011184)
HIX0011184
HIT000316552 (
NM_001008564
)
(Nucleoporin p58/p45; Nucleoporin-like protein 1;)
genome : 25,875,666 - 25,916,561 (40,896)
query : 1 - 4,299 (4,299/4,299)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, mito 12, cyto_nucl 10, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011184)
HIX0011184
HIT000317116 (
NM_014089
)
(Nucleoporin p58/p45; Nucleoporin-like protein 1;)
genome : 25,875,666 - 25,916,561 (40,896)
query : 1 - 4,335 (4,335/4,335)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 13, cyto_nucl 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011184)
HIX0011184
HIT000585931 (
ENST00000481980
)
(Nucleoporin p58/p45; Nucleoporin-like protein 1;)
genome : 25,875,694 - 25,882,087 (6,394)
query : 1 - 605 (605/605)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, cyto_nucl 10, nucl 7, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011184)
HIX0011184
HIT000043828
(
AK123955
)
(Conserved hypothetical protein.)
genome : 25,875,763 - 25,915,056 (39,294)
query : 1 - 2,664 (2,664/2,664)
16 exons
identity = 0.997
5'(0.973;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.988;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 8.5, cyto_nucl 7, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011184)
HIX0011184
HIT000498033
(
AK303409
)
(Nucleoporin p58/p45; Nucleoporin-like protein 1;)
genome : 25,875,763 - 25,905,858 (30,096)
query : 1 - 1,611 (1,611/1,611)
12 exons
identity = 0.996
5'(0.996;0.935;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR024882 : Nucleoporin p58/p45
GO :
0005643 : Cellular Component : nuclear pore
0006913 : Biological Process : nucleocytoplasmic transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 8, cyto_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011184)
HIX0011184
HIT000593799 (
ENST00000490231
)
(Nucleoporin p58/p45; Nucleoporin-like protein 1;)
genome : 25,875,763 - 25,887,094 (11,332)
query : 1 - 563 (563/563)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 12.5, extr 9, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011184)
HIX0011184
HIT000569780 (
ENST00000465068
)
(Nucleoporin p58/p45; Nucleoporin-like protein 1;)
genome : 25,875,763 - 25,887,080 (11,318)
query : 1 - 551 (551/551)
5 exons
identity = 0.989
5'(1.000;1.000;1.000;0.967;0.933)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 12, extr 9, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011184)
HIX0011184
HIT000565257 (
ENST00000460326
)
(Nucleoporin p58/p45 isoform b.)
genome : 25,875,763 - 25,883,567 (7,805)
query : 1 - 582 (582/582)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 10, nucl 7.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011184)
HIX0011184
HIT000584216 (
ENST00000480187
)
(Nucleoporin p58/p45; Nucleoporin-like protein 1;)
genome : 25,875,763 - 25,882,275 (6,513)
query : 1 - 588 (588/588)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 15, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011184)
HIX0011184
HIT000571332 (
ENST00000466694
)
(Nucleoporin p58/p45; Nucleoporin-like protein 1;)
genome : 25,875,769 - 25,913,016 (37,248)
query : 1 - 1,854 (1,854/1,854)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 13, cyto_nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011184)
HIX0011184
HIT000000127
(
AB007870
)
(Nucleoporin p58/p45; Nucleoporin-like protein 1;)
genome : 25,875,769 - 25,910,478 (34,710)
query : 1 - 6,356 (6,356/6,356)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, nucl 12, cyto_nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011184)
HIX0011184
HIT000568202 (
ENST00000463407
)
(Nucleoporin p58/p45; Nucleoporin-like protein 1;)
genome : 25,875,769 - 25,910,478 (34,710)
query : 1 - 6,360 (6,360/6,360)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, nucl 12, cyto_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011184)
HIX0011184
HIT000362996 (
ENST00000381718
)
(Nucleoporin p58/p45; Nucleoporin-like protein 1;)
genome : 25,875,771 - 25,914,856 (39,086)
query : 1 - 2,489 (2,489/2,489)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, mito 12, cyto_nucl 10, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011184)
HIX0011184
HIT000497570
(
AK302946
)
(Nucleoporin p58/p45; Nucleoporin-like protein 1;)
genome : 25,875,771 - 25,914,856 (39,086)
query : 1 - 2,489 (2,489/2,489)
15 exons
identity = 1.000
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR024882 : Nucleoporin p58/p45
GO :
0005643 : Cellular Component : nuclear pore
0006913 : Biological Process : nucleocytoplasmic transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito_nucl 13.1667, nucl 13, mito 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011184)
HIX0011184
HIT000598822 (
ENST00000495460
)
(Nucleoporin p58/p45; Nucleoporin-like protein 1;)
genome : 25,875,783 - 25,891,961 (16,179)
query : 1 - 947 (947/947)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, nucl 11.5, cyto_nucl 7, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011184)
HIX0011184
HIT000363025 (
ENST00000381747
)
(Nucleoporin p58/p45; Nucleoporin-like protein 1;)
genome : 25,875,785 - 25,910,447 (34,663)
query : 1 - 1,659 (1,659/1,659)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, nucl 12, cyto_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011184)
HIX0011184
HIT000030136
(
BC001104
)
Representative transcript
(Nucleoporin p58/p45; Nucleoporin-like protein 1;)
genome : 25,875,794 - 25,915,057 (39,264)
query : 1 - 2,703 (2,703/2,721)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR024882 : Nucleoporin p58/p45
GO :
0005643 : Cellular Component : nuclear pore
0006913 : Biological Process : nucleocytoplasmic transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 13, cyto_nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011184)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720073
Mus
sp. (Mouse) : AK029688
Danio
sp. (Zebrafish) : BC068367
Bos
sp. (Cow) : BC140493
Equus
sp. (Horse) : ENSECAT00000016748
Macaca
sp. (Macaque) : ENSMMUT00000043466
Oryzias
sp. (Medaka) : ENSORLT00000008651
Pongo
sp. (Orangutan) : ENSPPYT00000006183
Tetraodon
sp. (Tetraodon) : GSTENT00010500001
Takifugu
sp. (Fugu) : SINFRUT00000183126
Rattus
sp. (Rat) : U63839
Monodelphis
sp. (Opossum) : XM_001366665
Pan
sp. (Chimpanzee) : XM_509592
Canis
sp. (Dog) : XM_534528
HIX0011184
HIT000477742 (
ENST00000394327
)
(Nucleoporin p58/p45; Nucleoporin-like protein 1;)
genome : 25,881,960 - 25,910,482 (28,523)
query : 1 - 1,408 (1,408/1,408)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, mito 9, cyto 8, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011184)
HIX0011184
HIT000580742 (
ENST00000476553
)
(Nucleoporin p58/p45; Nucleoporin-like protein 1;)
genome : 25,894,411 - 25,899,192 (4,782)
query : 1 - 564 (564/564)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 22, cyto 19, cyto_plas 13, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011184)
HIX0011184
HIT000582003 (
ENST00000477876
)
(Nucleoporin p58/p45; Nucleoporin-like protein 1;)
genome : 25,905,571 - 25,923,938 (18,368)
query : 1 - 560 (560/560)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 15.5, cyto 9, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011184)
HIX0011184
HIT000009074
(
AK025800
)
(Conserved hypothetical protein.)
genome : 25,914,325 - 25,916,466 (2,142)
query : 5 - 2,146 (2,142/2,171)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011184)
HIX0011184
HIT000069756
(
AF113020
)
(Hypothetical short protein.)
genome : 25,915,287 - 25,916,544 (1,258)
query : 8 - 1,265 (1,258/1,275)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.994
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011184)
HIX0011184
HIT000009878
(
AK026604
)
(Hypothetical short protein.)
genome : 25,915,885 - 25,916,544 (660)
query : 1 - 660 (660/678)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011184)
HIX0011184
HIT000306698
(
CR749714
)
(Hypothetical short protein.)
genome : 25,916,010 - 25,916,554 (545)
query : 3 - 552 (550/559)
1 exon
identity = 0.971
5'(0.971)3'
coverage = 0.984
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, plas 6, mito 4.5, cyto_plas 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011184)
HIX0172236
HIT000545627 (
ENST00000447693
)
(Ubiquitin-related domain containing protein.)
genome : 25,939,937 - 25,940,293 (357)
query : 1 - 357 (357/357)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 10.5, nucl 9.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172236)
HIX0011185
HIT000362933 (
ENST00000381655
)
(Probable phospholipid-transporting ATPase IB; EC=3.6.3.1; ATPase class I type 8A member 2; ML-1;)
genome : 25,946,209 - 26,599,989 (653,781)
query : 1 - 9,575 (9,575/9,575)
37 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.3.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011185)
HIX0011185
HIT000206208 (
NM_016529
)
(Probable phospholipid-transporting ATPase IB; EC=3.6.3.1; ATPase class I type 8A member 2; ML-1;)
genome : 25,946,209 - 26,595,420 (649,212)
query : 1 - 5,006 (5,006/5,006)
37 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.3.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011185)
HIX0011185
HIT000047136
(
AK127263
)
Representative transcript
(Probable phospholipid-transporting ATPase IB; EC=3.6.3.1; ATPase class I type 8A member 2; ML-1;)
genome : 25,946,209 - 26,594,996 (648,788)
query : 1 - 4,582 (4,582/4,582)
37 exons
identity = 0.999
5'(1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.980;0.986;1.000;
1.000;1.000;1.000;0.988;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.3.1
InterPro :
IPR001757 : P-type ATPase
IPR006539 : P-type ATPase, subfamily IV
IPR008250 : P-type ATPase, A domain
IPR018303 : P-type ATPase, phosphorylation site
IPR023214 : HAD-like domain
IPR023299 : P-type ATPase, cytoplasmic domain N
GO :
0000166 : Molecular Function : nucleotide binding
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0006812 : Biological Process : cation transport
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
0019829 : Molecular Function : cation-transporting ATPase activity
0046872 : Molecular Function : metal ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011185)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF156550
Oryzias
sp. (Medaka) : ENSORLT00000011343
Pongo
sp. (Orangutan) : ENSPPYT00000006185
Tetraodon
sp. (Tetraodon) : GSTENT00023882001
Takifugu
sp. (Fugu) : SINFRUT00000183047
Rattus
sp. (Rat) : XM_001064626
Macaca
sp. (Macaque) : XM_001092901
Monodelphis
sp. (Opossum) : XM_001375812
Equus
sp. (Horse) : XM_001492094
Gallus
sp. (Chicken) : XM_417130
Pan
sp. (Chimpanzee) : XM_522636
Bos
sp. (Cow) : XM_585545
Danio
sp. (Zebrafish) : XR_045003
HIX0011185
HIT000045904
(
AK126031
)
(Probable phospholipid-transporting ATPase IB; EC=3.6.3.1; ATPase class I type 8A member 2; ML-1;)
genome : 26,042,943 - 26,594,432 (551,490)
query : 1 - 3,291 (3,291/3,291)
30 exons
identity = 0.994
5'(1.000;0.885;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.980;1.000;1.000;
0.993;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.3.1
InterPro :
IPR001757 : P-type ATPase
IPR006539 : P-type ATPase, subfamily IV
IPR008250 : P-type ATPase, A domain
IPR018303 : P-type ATPase, phosphorylation site
IPR023214 : HAD-like domain
IPR023299 : P-type ATPase, cytoplasmic domain N
GO :
0000166 : Molecular Function : nucleotide binding
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0006812 : Biological Process : cation transport
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
0019829 : Molecular Function : cation-transporting ATPase activity
0046872 : Molecular Function : metal ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011185)
HIX0011185
HIT000497604
(
AK302980
)
(Probable phospholipid-transporting ATPase IB; EC=3.6.3.1; ATPase class I type 8A member 2; ML-1;)
genome : 26,043,113 - 26,594,379 (551,267)
query : 12 - 3,685 (3,674/3,685)
35 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.980;1.000;1.000;1.000;
1.000;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.997
EC number :
EC 3.6.3.1
InterPro :
IPR001757 : P-type ATPase
IPR006539 : P-type ATPase, subfamily IV
IPR008250 : P-type ATPase, A domain
IPR018303 : P-type ATPase, phosphorylation site
IPR023214 : HAD-like domain
IPR023299 : P-type ATPase, cytoplasmic domain N
GO :
0000166 : Molecular Function : nucleotide binding
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0006812 : Biological Process : cation transport
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
0019829 : Molecular Function : cation-transporting ATPase activity
0046872 : Molecular Function : metal ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011185)
HIX0011185
HIT000106782 (
ENST00000255283
)
(Probable phospholipid-transporting ATPase IB; EC=3.6.3.1; ATPase class I type 8A member 2; ML-1;)
genome : 26,043,113 - 26,594,379 (551,267)
query : 1 - 3,674 (3,674/3,674)
35 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.3.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011185)
HIX0011185
HIT000362926 (
ENST00000381648
)
(Probable phospholipid-transporting ATPase IB; EC=3.6.3.1; ATPase class I type 8A member 2; ML-1;)
genome : 26,043,115 - 26,108,363 (65,249)
query : 1 - 476 (476/476)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.3.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 15, cyto 11, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011185)
HIX0011185
HIT000112112 (
ENST00000281620
)
(Probable phospholipid-transporting ATPase IB; EC=3.6.3.1; ATPase class I type 8A member 2; ML-1;)
genome : 26,043,117 - 26,594,344 (551,228)
query : 1 - 3,891 (3,891/3,891)
37 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.3.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 18, plas 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011185)
HIX0011185
HIT000502656
(
BC144228
)
(Probable phospholipid-transporting ATPase IB; EC=3.6.3.1; ATPase class I type 8A member 2; ML-1;)
genome : 26,043,117 - 26,594,344 (551,228)
query : 1 - 3,711 (3,711/3,711)
36 exons
identity = 0.999
5'(0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;1.000;0.980;1.000;1.000;1.000;
1.000;1.000;0.994;1.000;1.000;1.000;1.000;
0.987;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.6.3.1
InterPro :
IPR001757 : P-type ATPase
IPR006539 : P-type ATPase, subfamily IV
IPR008250 : P-type ATPase, A domain
IPR018303 : P-type ATPase, phosphorylation site
IPR023214 : HAD-like domain
IPR023299 : P-type ATPase, cytoplasmic domain N
GO :
0000166 : Molecular Function : nucleotide binding
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0006812 : Biological Process : cation transport
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
0019829 : Molecular Function : cation-transporting ATPase activity
0046872 : Molecular Function : metal ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011185)
HIX0011185
HIT000502657
(
BC144229
)
(Probable phospholipid-transporting ATPase IB; EC=3.6.3.1; ATPase class I type 8A member 2; ML-1;)
genome : 26,043,117 - 26,594,344 (551,228)
query : 1 - 3,891 (3,891/3,891)
37 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.980;1.000;1.000;1.000;
1.000;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.3.1
InterPro :
IPR001757 : P-type ATPase
IPR006539 : P-type ATPase, subfamily IV
IPR008250 : P-type ATPase, A domain
IPR018303 : P-type ATPase, phosphorylation site
IPR023214 : HAD-like domain
IPR023299 : P-type ATPase, cytoplasmic domain N
GO :
0000166 : Molecular Function : nucleotide binding
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0006812 : Biological Process : cation transport
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
0019829 : Molecular Function : cation-transporting ATPase activity
0046872 : Molecular Function : metal ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 18, plas 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011185)
HIX0011185
HIT000074736
(
AF236871
)
(Probable phospholipid-transporting ATPase IB; EC=3.6.3.1; ATPase class I type 8A member 2; ML-1;)
genome : 26,043,159 - 26,594,429 (551,271)
query : 1 - 3,291 (3,291/3,308)
30 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.988;0.994;1.000;1.000;1.000;
1.000;1.000;0.968;1.000;1.000;1.000;1.000;
1.000;0.980)3'
coverage = 0.999
EC number :
EC 3.6.3.1
InterPro :
IPR001757 : P-type ATPase
IPR006539 : P-type ATPase, subfamily IV
IPR008250 : P-type ATPase, A domain
IPR018303 : P-type ATPase, phosphorylation site
IPR023214 : HAD-like domain
IPR023299 : P-type ATPase, cytoplasmic domain N
GO :
0000166 : Molecular Function : nucleotide binding
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0006812 : Biological Process : cation transport
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
0019829 : Molecular Function : cation-transporting ATPase activity
0046872 : Molecular Function : metal ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011185)
HIX0011185
HIT000054620
(
BX537836
)
(Probable phospholipid-transporting ATPase IB; EC=3.6.3.1; ATPase class I type 8A member 2; ML-1;)
genome : 26,114,456 - 26,594,423 (479,968)
query : 1 - 3,287 (3,287/3,352)
30 exons
identity = 0.998
5'(1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.980;1.000;1.000;
1.000;1.000;1.000;0.994;1.000;1.000;0.987;
1.000;0.987;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.3.1
InterPro :
IPR001757 : P-type ATPase
IPR006539 : P-type ATPase, subfamily IV
IPR008250 : P-type ATPase, A domain
IPR018303 : P-type ATPase, phosphorylation site
IPR023214 : HAD-like domain
IPR023299 : P-type ATPase, cytoplasmic domain N
GO :
0000166 : Molecular Function : nucleotide binding
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0006812 : Biological Process : cation transport
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
0019829 : Molecular Function : cation-transporting ATPase activity
0046872 : Molecular Function : metal ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011185)
HIX0011185
HIT000019508
(
AK094653
)
(Probable phospholipid-transporting ATPase IB; EC=3.6.3.1; ATPase class I type 8A member 2; ML-1;)
genome : 26,127,947 - 26,594,425 (466,479)
query : 1 - 2,796 (2,796/2,796)
26 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.980;1.000;1.000;1.000;1.000;1.000;0.988;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.3.1
InterPro :
IPR001757 : P-type ATPase
IPR006539 : P-type ATPase, subfamily IV
IPR018303 : P-type ATPase, phosphorylation site
IPR023214 : HAD-like domain
IPR023299 : P-type ATPase, cytoplasmic domain N
GO :
0000166 : Molecular Function : nucleotide binding
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0006812 : Biological Process : cation transport
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
0019829 : Molecular Function : cation-transporting ATPase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011185)
HIX0011185
HIT000025544
(
AL137256
)
(Probable phospholipid-transporting ATPase IB; EC=3.6.3.1; ATPase class I type 8A member 2; ML-1;)
genome : 26,138,087 - 26,594,429 (456,343)
query : 16 - 2,497 (2,482/2,556)
22 exons
identity = 0.998
5'(0.976;1.000;1.000;0.980;1.000;1.000;1.000;
1.000;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.994
EC number :
EC 3.6.3.1
InterPro :
IPR001757 : P-type ATPase
IPR006539 : P-type ATPase, subfamily IV
IPR023214 : HAD-like domain
IPR023299 : P-type ATPase, cytoplasmic domain N
GO :
0000166 : Molecular Function : nucleotide binding
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0006812 : Biological Process : cation transport
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
0019829 : Molecular Function : cation-transporting ATPase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 19, cyto_nucl 12.8333, cyto_mito 10.3333,
nucl 5.5, plas 2.5, extr_plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011185)
HIX0011185
HIT000429120
(
AK310254
)
(Probable phospholipid-transporting ATPase IB; EC=3.6.3.1; ATPase class I type 8A member 2;)
genome : 26,141,271 - 26,501,421 (360,151)
query : 1 - 2,227 (2,227/2,227)
20 exons
identity = 0.997
5'(1.000;0.991;1.000;0.980;1.000;1.000;1.000;
1.000;1.000;1.000;0.988;1.000;1.000;1.000;
0.992;1.000;1.000;1.000;1.000;0.994)3'
coverage = 1.000
EC number :
EC 3.6.3.1
InterPro :
IPR001757 : P-type ATPase
IPR006539 : P-type ATPase, subfamily IV
IPR023214 : HAD-like domain
IPR023299 : P-type ATPase, cytoplasmic domain N
GO :
0000166 : Molecular Function : nucleotide binding
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0006812 : Biological Process : cation transport
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
0019829 : Molecular Function : cation-transporting ATPase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, pero 6, extr_plas 6, mito 5, E.R. 4,
mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011185)
HIX0011185
HIT000595353 (
ENST00000491840
)
(Probable phospholipid-transporting ATPase IB; EC=3.6.3.1; ATPase class I type 8A member 2;)
genome : 26,141,271 - 26,501,421 (360,151)
query : 1 - 2,227 (2,227/2,227)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.3.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, pero 6, extr_plas 6, mito 5, E.R. 4,
mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011185)
HIX0011185
HIT000026371
(
AL390129
)
(Probable phospholipid-transporting ATPase IB; EC=3.6.3.1; ATPase class I type 8A member 2; ML-1;)
genome : 26,413,708 - 26,599,256 (185,549)
query : 1 - 5,798 (5,798/5,822)
8 exons
identity = 0.998
5'(1.000;1.000;0.982;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 1.000
EC number :
EC 3.6.3.1
InterPro :
IPR006539 : P-type ATPase, subfamily IV
GO :
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8, extr 7, E.R. 5, mito_pero 5, cyto_plas 5,
mito 3.5, pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011185)
HIX0171813
HIT000221758
(
U82320
)
Representative transcript
(Conserved hypothetical protein.)
genome : 26,437,388 - 26,438,462 (1,075)
query : 1 - 1,075 (1,075/1,075)
1 exon
identity = 0.973
3'(0.973)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.3333, nucl 13, extr 11, cyto 7.5,
cyto_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171813)
HIX0171813
HIT000122472 (
ENST00000320572
)
(Conserved hypothetical protein.)
genome : 26,437,388 - 26,437,805 (418)
query : 1 - 408 (408/408)
1 exon
identity = 0.976
3'(0.976)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11.8333, extr 10, cyto 8,
cyto_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171813)
HIX0171813
HIT000545369 (
ENST00000447435
)
(Conserved hypothetical protein.)
genome : 26,437,388 - 26,437,805 (418)
query : 1 - 418 (418/418)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 9, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171813)
HIX0130830
HIT000455857
(
DQ589326
)
Representative transcript
(Non-protein coding transcript.)
genome : 26,440,064 - 26,440,094 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130830)
HIX0037629
HIT000221752
(
U82303
)
Representative transcript
(Conserved hypothetical protein.)
genome : 26,452,336 - 26,452,679 (344)
query : 1 - 344 (344/344)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28.5, extr_plas 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037629)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000006187
HIX0037629
HIT000708516 (
ENST00000596729
)
(Conserved hypothetical protein.)
genome : 26,452,422 - 26,452,679 (258)
query : 1 - 258 (258/258)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28.5, extr_plas 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037629)
HIX0220853
HIT000586402 (
ENST00000482473
)
(Hypothetical short protein.)
genome : 26,518,632 - 26,518,891 (260)
query : 1 - 260 (260/260)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220853)
HIX0037631
HIT000221756
(
U82313
)
Representative transcript
(Conserved hypothetical protein.)
genome : 26,545,852 - 26,546,315 (464)
query : 1 - 463 (463/463)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 7, cyto_nucl 7, cyto_pero 5.83333,
nucl 5.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037631)
HIX0037442
HIT000005370
(
AK022096
)
Representative transcript
(Hypothetical protein.)
genome : 26,597,655 - 26,599,254 (1,600)
query : 1 - 1,600 (1,600/1,600)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 7, nucl 5.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037442)
HIX0037322
HIT000122055 (
ENST00000319420
)
(Protein shisa-2 homolog; Transmembrane protein 46; Precursor;)
genome : 26,618,735 - 26,625,198 (6,464)
query : 1 - 2,889 (2,889/2,889)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037322)
HIX0037322
HIT000316457 (
NM_001007538
)
(Protein shisa-2 homolog; Transmembrane protein 46; Precursor;)
genome : 26,618,735 - 26,625,198 (6,464)
query : 1 - 2,889 (2,889/2,889)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037322)
HIX0037322
HIT000390950
(
BC132898
)
Representative transcript
(Protein shisa-2 homolog; Transmembrane protein 46; Precursor;)
genome : 26,620,573 - 26,625,165 (4,593)
query : 1 - 1,018 (1,018/1,018)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026910 : Shisa family
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037322)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AF257354
Mus
sp. (Mouse) : AK034905
Bos
sp. (Cow) : BC149221
Equus
sp. (Horse) : ENSECAT00000013699
Oryzias
sp. (Medaka) : ENSORLT00000011369
Pongo
sp. (Orangutan) : ENSPPYT00000006188
Tetraodon
sp. (Tetraodon) : GSTENT00002007001
Takifugu
sp. (Fugu) : SINFRUT00000158510
Macaca
sp. (Macaque) : XM_001093015
Pan
sp. (Chimpanzee) : XM_001155896
Monodelphis
sp. (Opossum) : XM_001375798
Rattus
sp. (Rat) : XM_573798
Canis
sp. (Dog) : XM_845953
HIX0037322
HIT000501060
(
BC137092
)
(Protein shisa-2 homolog; Transmembrane protein 46; Precursor;)
genome : 26,620,573 - 26,625,165 (4,593)
query : 1 - 1,018 (1,018/1,018)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026910 : Shisa family
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037322)
HIX0037322
HIT000252819
(
AY358775
)
(Protein shisa-2 homolog; Transmembrane protein 46; Precursor;)
genome : 26,620,582 - 26,625,169 (4,588)
query : 18 - 1,030 (1,013/1,030)
2 exons
identity = 0.999
3'(0.998;1.000)5'
coverage = 0.983
InterPro :
IPR026910 : Shisa family
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037322)
HIX0172171
HIT000537013 (
ENST00000439079
)
(Hypothetical short protein.)
genome : 26,626,414 - 26,627,523 (1,110)
query : 1 - 435 (435/435)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 15, nucl 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172171)
HIX0011186
HIT000524726 (
ENST00000426792
)
(Probable phospholipid-transporting ATPase IB; EC=3.6.3.1; ATPase class I type 8A member 2;)
genome : 26,688,547 - 26,728,313 (39,767)
query : 1 - 1,433 (1,433/1,433)
16 exons
identity = 0.980
3'(1.000;0.949;1.000;0.966;0.968;1.000;1.000;
0.964;1.000;1.000;0.889;0.958;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.3.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 7.66667, cyto 6, mito 6,
extr_plas 6, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011186)
HIX0172060
HIT000523780 (
ENST00000425846
)
(Conserved hypothetical protein.)
genome : 26,691,686 - 26,693,102 (1,417)
query : 1 - 705 (705/705)
3 exons
identity = 0.994
5'(1.000;0.984;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 8.83333, cyto 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172060)
HIX0037501
HIT000094564
(
BC036688
)
Representative transcript
(Conserved hypothetical protein.)
genome : 26,698,247 - 26,699,370 (1,124)
query : 4 - 1,126 (1,123/1,206)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14.5, nucl 6.5, extr 5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037501)
HIX0011186
HIT000076543
(
AF293342
)
(E3 ubiquitin-protein ligase RNF6; EC=6.3.2.-;)
genome : 26,706,253 - 26,796,398 (90,146)
query : 1 - 1,104 (1,104/1,116)
6 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;0.988;1.000)5'
coverage = 0.999
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 14, cyto 12, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011186)
HIX0011186
HIT000573046 (
ENST00000468480
)
(E3 ubiquitin-protein ligase RNF6; EC=6.3.2.-;)
genome : 26,706,253 - 26,796,398 (90,146)
query : 1 - 1,105 (1,105/1,105)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 14, cyto 12, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011186)
HIX0011186
HIT000244407
(
AJ010346
)
Representative transcript
(E3 ubiquitin-protein ligase RNF6; EC=6.3.2.-;)
genome : 26,786,905 - 26,796,398 (9,494)
query : 1 - 3,474 (3,474/3,503)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;0.988;1.000)5'
coverage = 0.992
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011186)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168929
Mus
sp. (Mouse) : AK004745
Bos
sp. (Cow) : BC140555
Equus
sp. (Horse) : ENSECAT00000014237
Gallus
sp. (Chicken) : ENSGALT00000027631
Oryzias
sp. (Medaka) : ENSORLT00000011168
Takifugu
sp. (Fugu) : SINFRUT00000173884
Pan
sp. (Chimpanzee) : XM_001156075
Monodelphis
sp. (Opossum) : XM_001366780
Rattus
sp. (Rat) : XM_221888
Canis
sp. (Dog) : XM_534526
Danio
sp. (Zebrafish) : XM_688822
HIX0011186
HIT000244408
(
AJ010347
)
(E3 ubiquitin-protein ligase RNF6; EC=6.3.2.-;)
genome : 26,786,905 - 26,795,978 (9,074)
query : 1 - 3,275 (3,275/3,304)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;0.983)5'
coverage = 0.991
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011186)
HIX0011186
HIT000025088
(
AL133621
)
(E3 ubiquitin-protein ligase RNF6; EC=6.3.2.-;)
genome : 26,786,909 - 26,789,063 (2,155)
query : 1 - 2,155 (2,155/2,185)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, mito 10, cyto_nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011186)
HIX0011186
HIT000051200
(
BC034688
)
(E3 ubiquitin-protein ligase RNF6; EC=6.3.2.-;)
genome : 26,786,914 - 26,795,469 (8,556)
query : 9 - 3,216 (3,208/3,246)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;0.988)5'
coverage = 0.998
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011186)
HIX0011186
HIT000318913 (
NM_183043
)
(E3 ubiquitin-protein ligase RNF6; EC=6.3.2.-;)
genome : 26,786,905 - 26,796,028 (9,124)
query : 1 - 3,325 (3,325/3,339)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011186)
HIX0011186
HIT000318914 (
NM_183044
)
(E3 ubiquitin-protein ligase RNF6; EC=6.3.2.-;)
genome : 26,786,905 - 26,795,894 (8,990)
query : 1 - 3,459 (3,459/3,473)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011186)
HIX0011186
HIT000083155
(
AY009109
)
(E3 ubiquitin-protein ligase RNF6; EC=6.3.2.-;)
genome : 26,786,912 - 26,795,840 (8,929)
query : 3 - 3,398 (3,396/3,412)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;0.988;0.995)5'
coverage = 0.998
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011186)
HIX0011186
HIT000362866 (
ENST00000381588
)
(E3 ubiquitin-protein ligase RNF6; EC=6.3.2.-;)
genome : 26,786,905 - 26,796,791 (9,887)
query : 1 - 3,867 (3,867/3,867)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011186)
HIX0011186
HIT000202616 (
NM_005977
)
(E3 ubiquitin-protein ligase RNF6; EC=6.3.2.-;)
genome : 26,786,905 - 26,796,508 (9,604)
query : 1 - 3,584 (3,584/3,584)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011186)
HIX0011186
HIT000307256 (
ENST00000346166
)
(E3 ubiquitin-protein ligase RNF6; EC=6.3.2.-;)
genome : 26,786,905 - 26,795,979 (9,075)
query : 1 - 3,276 (3,276/3,276)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011186)
HIX0011186
HIT000306278
(
CR749238
)
(E3 ubiquitin-protein ligase RNF6; EC=6.3.2.-;)
genome : 26,786,912 - 26,796,443 (9,532)
query : 1 - 3,509 (3,509/3,510)
5 exons
identity = 0.996
3'(0.998;1.000;1.000;0.988;0.974)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011186)
HIX0011186
HIT000362848 (
ENST00000381570
)
(E3 ubiquitin-protein ligase RNF6; EC=6.3.2.-;)
genome : 26,786,912 - 26,795,840 (8,929)
query : 1 - 3,398 (3,398/3,398)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011186)
HIX0011186
HIT000482794 (
ENST00000399762
)
(E3 ubiquitin-protein ligase RNF6; EC=6.3.2.-;)
genome : 26,787,923 - 26,795,949 (8,027)
query : 1 - 1,524 (1,524/1,524)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011186)
HIX0011186
HIT000487896
(
AK293272
)
(E3 ubiquitin-protein ligase RNF6; EC=6.3.2.-;)
genome : 26,787,923 - 26,795,949 (8,027)
query : 1 - 1,524 (1,524/1,524)
6 exons
identity = 0.999
3'(1.000;1.000;0.990;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011186)
HIX0011186
HIT000431301
(
AK312435
)
(E3 ubiquitin-protein ligase RNF6; EC=6.3.2.-;)
genome : 26,787,961 - 26,796,452 (8,492)
query : 1 - 2,473 (2,473/2,473)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;0.997)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011186)
HIX0011186
HIT000601282 (
ENST00000498039
)
(E3 ubiquitin-protein ligase RNF6; EC=6.3.2.-;)
genome : 26,789,276 - 26,795,947 (6,672)
query : 1 - 855 (855/855)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011186)
HIX0011186
HIT000580543 (
ENST00000476347
)
(E3 ubiquitin-protein ligase RNF6; EC=6.3.2.-;)
genome : 26,793,433 - 26,795,828 (2,396)
query : 1 - 633 (633/633)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 9.5, cyto 9, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011186)
HIX0011186
HIT000578576 (
ENST00000474280
)
(Hypothetical short protein.)
genome : 26,795,390 - 26,796,226 (837)
query : 1 - 333 (333/333)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011186)
HIX0172111
HIT000529912 (
ENST00000431978
)
(Conserved hypothetical protein.)
genome : 26,808,350 - 26,811,266 (2,917)
query : 1 - 2,310 (2,310/2,310)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 12, cyto_nucl 10.5, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172111)
HIX0130692
HIT000443361
(
DQ576830
)
Representative transcript
(Non-protein coding transcript.)
genome : 26,810,999 - 26,811,028 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130692)
HIX0037326
HIT000335085
(
BC094784
)
(Cyclin-dependent kinase 8; EC=2.7.11.22; EC=2.7.11.23; Cell division protein kinase 8; Mediator complex subunit CDK8; Mediator of RNA polymerase II transcription subunit CDK8; Protein kinase K35;)
genome : 26,828,241 - 26,979,372 (151,132)
query : 1 - 3,029 (3,029/3,044)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.7.11.22
,
EC 2.7.11.23
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 13.5, extr 4, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037326)
HIX0037326
HIT000362805 (
ENST00000381527
)
(Cyclin-dependent kinase 8; EC=2.7.11.22; EC=2.7.11.23; Cell division protein kinase 8; Mediator complex subunit CDK8; Mediator of RNA polymerase II transcription subunit CDK8; Protein kinase K35;)
genome : 26,828,276 - 26,979,375 (151,100)
query : 1 - 3,055 (3,055/3,055)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.22
,
EC 2.7.11.23
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 11.5, cyto_mito 6.5, plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037326)
HIX0037326
HIT000198255 (
NM_001260
)
(Cyclin-dependent kinase 8; EC=2.7.11.22; EC=2.7.11.23; Cell division protein kinase 8; Mediator complex subunit CDK8; Mediator of RNA polymerase II transcription subunit CDK8; Protein kinase K35;)
genome : 26,828,756 - 26,978,569 (149,814)
query : 4 - 1,772 (1,769/1,772)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
EC number :
EC 2.7.11.22
,
EC 2.7.11.23
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 11.5, cyto_mito 6.5, plas 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037326)
HIX0037326
HIT000324176
(
X85753
)
Representative transcript
(Cyclin-dependent kinase 8; EC=2.7.11.22; EC=2.7.11.23; Cell division protein kinase 8; Mediator complex subunit CDK8; Mediator of RNA polymerase II transcription subunit CDK8; Protein kinase K35;)
genome : 26,828,756 - 26,978,569 (149,814)
query : 4 - 1,772 (1,769/1,772)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
EC number :
EC 2.7.11.22
,
EC 2.7.11.23
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 11.5, cyto_mito 6.5, plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037326)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB052177
Mus
sp. (Mouse) : AK131948
Danio
sp. (Zebrafish) : BC045878
Gallus
sp. (Chicken) : CR389208
Equus
sp. (Horse) : ENSECAT00000016586
Oryzias
sp. (Medaka) : ENSORLT00000011145
Pongo
sp. (Orangutan) : ENSPPYT00000006191
Tetraodon
sp. (Tetraodon) : GSTENT00023879001
Takifugu
sp. (Fugu) : SINFRUT00000158484
Monodelphis
sp. (Opossum) : XM_001366829
Pan
sp. (Chimpanzee) : XM_509595
Bos
sp. (Cow) : XM_583707
Canis
sp. (Dog) : XM_854758
HIX0037326
HIT000337781
(
BC104492
)
(Cyclin-dependent kinase 8; EC=2.7.11.22; EC=2.7.11.23; Cell division protein kinase 8; Mediator complex subunit CDK8; Mediator of RNA polymerase II transcription subunit CDK8; Protein kinase K35;)
genome : 26,828,756 - 26,978,317 (149,562)
query : 4 - 1,520 (1,517/1,520)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
EC number :
EC 2.7.11.22
,
EC 2.7.11.23
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 11.5, cyto_mito 6.5, plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037326)
HIX0037326
HIT000338322
(
BC105950
)
(Cyclin-dependent kinase 8; EC=2.7.11.22; EC=2.7.11.23; Cell division protein kinase 8; Mediator complex subunit CDK8; Mediator of RNA polymerase II transcription subunit CDK8; Protein kinase K35;)
genome : 26,828,756 - 26,978,317 (149,562)
query : 4 - 1,517 (1,514/1,517)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
EC number :
EC 2.7.11.22
,
EC 2.7.11.23
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.8333, nucl 15, cyto 14.5,
cyto_mito 8.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037326)
HIX0037326
HIT000338807
(
BC107601
)
(Cyclin-dependent kinase 8; EC=2.7.11.22; EC=2.7.11.23; Cell division protein kinase 8; Mediator complex subunit CDK8; Mediator of RNA polymerase II transcription subunit CDK8; Protein kinase K35;)
genome : 26,828,756 - 26,978,317 (149,562)
query : 4 - 1,516 (1,513/1,516)
13 exons
identity = 0.999
5'(0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
EC number :
EC 2.7.11.22
,
EC 2.7.11.23
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.8333, nucl 15, cyto 14.5,
cyto_mito 8.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037326)
HIX0037326
HIT000263785
(
BC069634
)
(Cyclin-dependent kinase 8; EC=2.7.11.22; EC=2.7.11.23; Cell division protein kinase 8; Mediator complex subunit CDK8; Mediator of RNA polymerase II transcription subunit CDK8; Protein kinase K35;)
genome : 26,828,756 - 26,978,267 (149,512)
query : 1 - 1,464 (1,464/1,464)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.22
,
EC 2.7.11.23
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.8333, nucl 15, cyto 14.5,
cyto_mito 8.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037326)
HIX0037326
HIT000257295
(
AY702976
)
(Cyclin-dependent kinase 8; EC=2.7.11.22; EC=2.7.11.23; Cell division protein kinase 8; Mediator complex subunit CDK8; Mediator of RNA polymerase II transcription subunit CDK8; Protein kinase K35;)
genome : 26,828,779 - 26,978,218 (149,440)
query : 1 - 1,337 (1,337/1,337)
12 exons
identity = 0.993
5'(1.000;1.000;0.982;0.993;1.000;0.965;0.986;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.22
,
EC 2.7.11.23
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 13, extr 4, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037326)
HIX0037326
HIT000635837 (
ENST00000536792
)
(Cyclin-dependent kinase 8; EC=2.7.11.22; EC=2.7.11.23; Cell division protein kinase 8; Mediator complex subunit CDK8; Mediator of RNA polymerase II transcription subunit CDK8; Protein kinase K35;)
genome : 26,828,779 - 26,978,218 (149,440)
query : 1 - 1,337 (1,337/1,337)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.22
,
EC 2.7.11.23
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 13.5, extr 4, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037326)
HIX0037326
HIT000491499
(
AK296875
)
(Cyclin-dependent kinase 8; EC=2.7.11.22; EC=2.7.11.23; Cell division protein kinase 8; Mediator complex subunit CDK8; Mediator of RNA polymerase II transcription subunit CDK8; Protein kinase K35;)
genome : 26,911,703 - 26,978,475 (66,773)
query : 9 - 1,530 (1,522/1,530)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.994;1.000)3'
coverage = 0.995
EC number :
EC 2.7.11.22
,
EC 2.7.11.23
InterPro :
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12.5, nucl 8.5, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037326)
HIX0037326
HIT000581444 (
ENST00000477290
)
(Cyclin-dependent kinase 8; EC=2.7.11.22; EC=2.7.11.23; Cell division protein kinase 8; Mediator complex subunit CDK8; Mediator of RNA polymerase II transcription subunit CDK8; Protein kinase K35;)
genome : 26,911,704 - 26,974,652 (62,949)
query : 1 - 810 (810/810)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.22
,
EC 2.7.11.23
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 12.5, mito 7, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037326)
HIX0037326
HIT000490708
(
AK296084
)
(Cyclin-dependent kinase 8; EC=2.7.11.22; EC=2.7.11.23; Cell division protein kinase 8; Mediator complex subunit CDK8; Mediator of RNA polymerase II transcription subunit CDK8; Protein kinase K35;)
genome : 26,956,967 - 26,978,540 (21,574)
query : 1 - 1,245 (1,245/1,245)
9 exons
identity = 0.999
5'(1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.22
,
EC 2.7.11.23
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 12, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037326)
HIX0037326
HIT000570503 (
ENST00000465820
)
(Cyclin-dependent kinase 8; EC=2.7.11.22; EC=2.7.11.23; Cell division protein kinase 8; Mediator complex subunit CDK8; Mediator of RNA polymerase II transcription subunit CDK8; Protein kinase K35;)
genome : 26,959,348 - 26,975,736 (16,389)
query : 1 - 586 (586/586)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.22
,
EC 2.7.11.23
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, nucl 10, cyto_mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037326)
HIX0037337
HIT000093486
(
BC034584
)
(Conserved hypothetical protein.)
genome : 26,963,892 - 26,967,369 (3,478)
query : 3 - 3,480 (3,478/3,495)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 9, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037337)
HIX0037337
HIT000098545
(
BC047364
)
Representative transcript
(Conserved hypothetical protein.)
genome : 26,963,892 - 26,967,369 (3,478)
query : 3 - 3,481 (3,479/3,495)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037337)
HIX0037326
HIT000581432 (
ENST00000477277
)
(Cyclin-dependent kinase 8; EC=2.7.11.22; EC=2.7.11.23; Cell division protein kinase 8; Mediator complex subunit CDK8; Mediator of RNA polymerase II transcription subunit CDK8; Protein kinase K35;)
genome : 26,970,354 - 26,979,315 (8,962)
query : 1 - 1,770 (1,770/1,770)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.22
,
EC 2.7.11.23
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037326)
HIX0037326
HIT000192533
(
L23208
)
(Cyclin-dependent kinase 8; EC=2.7.11.22; EC=2.7.11.23; Cell division protein kinase 8; Mediator complex subunit CDK8; Mediator of RNA polymerase II transcription subunit CDK8; Protein kinase K35;)
genome : 26,971,294 - 26,978,533 (7,240)
query : 1 - 846 (846/846)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 2.7.11.22
,
EC 2.7.11.23
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037326)
HIX0037326
HIT000584346 (
ENST00000480323
)
(Cyclin-dependent kinase 8; EC=2.7.11.22; EC=2.7.11.23; Cell division protein kinase 8; Mediator complex subunit CDK8; Mediator of RNA polymerase II transcription subunit CDK8; Protein kinase K35;)
genome : 26,974,210 - 26,979,375 (5,166)
query : 1 - 1,996 (1,996/1,996)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.22
,
EC 2.7.11.23
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16.5, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037326)
HIX0037326
HIT000192534
(
L23311
)
(Non-protein coding transcript.)
genome : 26,979,087 - 26,979,371 (285)
query : 1 - 285 (285/288)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.990
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037326)
HIX0192628
pHIT000112539 ( pHIT000112539 )
Representative transcript
(Conserved hypothetical protein.)
genome : 25,591,595 - 25,606,596 (15,002)
query : 1 - 687 (687/687)
2 exons
InterPro :
IPR013258 : Striatin, N-terminal
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192628)
CAGE tag :
T13F0175ADFC
AL354798.13
25500001-25577709 F +
NCBI
AL590099.9
25577710-25605797 F +
NCBI
AL359757.21
25605798-25790863 F +
NCBI
AL590787.24
25790864-25911452 F +
NCBI
AL646102.4
25911453-25913446 F +
NCBI
AL138958.18
25913447-26074421 F +
NCBI
AL356316.18
26074422-26148422 F +
NCBI
AL669971.2
26148423-26226499 F +
NCBI
AL136438.10
26226500-26402818 F -
NCBI
AL157366.12
26402819-26438251 F +
NCBI
AL138815.6
26438252-26596461 F -
NCBI
AL139004.11
26596462-26647046 F +
NCBI
AL138966.19
26647047-26818106 F +
NCBI
AL590108.5
26818107-26856165 F +
NCBI
AL159159.21
26856166-27000591 F +
NCBI
AL353789.18
27000592-27100000 F +
NCBI