bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0011212
HIT000704768 (
ENST00000592950
)
(Non-protein coding transcript.)
genome : 31,456,070 - 31,505,420 (49,351)
query : 1 - 747 (747/747)
6 exons
identity = 0.988
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011212)
HIX0011212
HIT000660227 (
NR_038287
)
(Hypothetical short protein.)
genome : 31,456,972 - 31,506,745 (49,774)
query : 1 - 2,061 (2,061/2,073)
4 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, mito 10, cyto 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011212)
HIX0011212
HIT000018032
(
AK093165
)
Representative transcript
(Conserved hypothetical protein.)
genome : 31,456,978 - 31,506,745 (49,768)
query : 1 - 2,055 (2,055/2,055)
4 exons
identity = 0.999
3'(1.000;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, mito 10, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011212)
HIX0011212
HIT000697724 (
ENST00000585870
)
(Hypothetical short protein.)
genome : 31,456,978 - 31,506,743 (49,766)
query : 1 - 2,053 (2,053/2,053)
4 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, mito 10, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011212)
HIX0011212
HIT000700566 (
ENST00000588726
)
(Hypothetical short protein.)
genome : 31,457,086 - 31,505,762 (48,677)
query : 1 - 841 (841/841)
3 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, mito 10, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011212)
HIX0011212
HIT000702177 (
ENST00000590344
)
(Hypothetical short protein.)
genome : 31,473,543 - 31,505,495 (31,953)
query : 1 - 768 (768/768)
3 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011212)
HIX0011212
HIT000705064 (
ENST00000593246
)
(Hypothetical short protein.)
genome : 31,478,894 - 31,505,691 (26,798)
query : 1 - 797 (797/797)
3 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 11, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011212)
HIX0011212
HIT000702548 (
ENST00000590721
)
(Conserved hypothetical protein.)
genome : 31,482,913 - 31,505,565 (22,653)
query : 1 - 591 (591/591)
3 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9, cyto 6, cyto_pero 4.5, mito_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011212)
HIX0011212
HIT000698818 (
ENST00000586973
)
(Hypothetical short protein.)
genome : 31,490,183 - 31,505,656 (15,474)
query : 1 - 712 (712/712)
3 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, pero 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011212)
HIX0011212
HIT000549429 (
ENST00000451495
)
(Hypothetical short protein.)
genome : 31,490,183 - 31,505,646 (15,464)
query : 1 - 650 (650/650)
3 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, pero 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011212)
HIX0011212
HIT000698311 (
ENST00000586464
)
(Hypothetical short protein.)
genome : 31,490,321 - 31,505,566 (15,246)
query : 1 - 851 (851/851)
3 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 8, cyto_nucl 6.66667, cyto 5.5,
nucl 4.5, cyto_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011212)
HIX0011212
HIT000700265 (
ENST00000588425
)
(Conserved hypothetical protein.)
genome : 31,496,482 - 31,506,593 (10,112)
query : 1 - 1,462 (1,462/1,462)
4 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, nucl 14, cyto 9, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011212)
HIX0011212
HIT000697438 (
ENST00000585582
)
(Hypothetical short protein.)
genome : 31,502,795 - 31,505,679 (2,885)
query : 1 - 853 (853/853)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 9, cyto_mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011212)
HIX0011212
HIT000097330
(
BC042736
)
(Hypothetical short protein.)
genome : 31,504,810 - 31,506,721 (1,912)
query : 1 - 1,201 (1,201/1,237)
3 exons
identity = 0.996
3'(1.000;0.994;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 11.5, cyto_nucl 7, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011212)
HIX0011212
HIT000660228 (
NR_038288
)
(Hypothetical short protein.)
genome : 31,504,810 - 31,506,745 (1,936)
query : 1 - 1,226 (1,226/1,245)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 11.5, cyto_nucl 7, extr 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011212)
HIX0011212
HIT000509769 (
ENST00000411835
)
(Conserved hypothetical protein.)
genome : 31,504,809 - 31,506,721 (1,913)
query : 1 - 1,203 (1,203/1,203)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 11.5, cyto_nucl 7, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011212)
HIX0011212
HIT000701678 (
ENST00000589840
)
(Hypothetical short protein.)
genome : 31,504,983 - 31,506,390 (1,408)
query : 1 - 865 (865/865)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 3, cyto 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011212)
HIX0011212
HIT000527134 (
ENST00000429200
)
(Conserved hypothetical protein.)
genome : 31,505,766 - 31,506,620 (855)
query : 1 - 683 (683/683)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 3, cyto 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011212)
HIX0011212
HIT000702954 (
ENST00000591131
)
(Hypothetical short protein.)
genome : 31,505,851 - 31,507,983 (2,133)
query : 1 - 1,131 (1,131/1,131)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 8, cyto 3, golg 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011212)
HIX0011212
HIT000699439 (
ENST00000587596
)
(Hypothetical short protein.)
genome : 31,505,851 - 31,507,574 (1,724)
query : 1 - 356 (356/356)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 10, nucl 3.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011212)
HIX0011212
HIT000703123 (
ENST00000591300
)
(Hypothetical short protein.)
genome : 31,505,924 - 31,507,568 (1,645)
query : 1 - 815 (815/815)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 8, cyto 3, golg 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011212)
HIX0201999
HIT000041011
(
BC030277
)
Representative transcript
(Testis-expressed sequence 26 protein.)
genome : 31,506,834 - 31,549,152 (42,319)
query : 1 - 997 (997/1,113)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201999)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK161244
Bos
sp. (Cow) : BC146109
Equus
sp. (Horse) : ENSECAT00000016018
Pongo
sp. (Orangutan) : ENSPPYT00000006221
Rattus
sp. (Rat) : XM_001067388
Macaca
sp. (Macaque) : XM_001100666
Monodelphis
sp. (Opossum) : XM_001376899
Pan
sp. (Chimpanzee) : XM_509614
Canis
sp. (Dog) : XM_844828
HIX0201999
HIT000213596 (
NM_152325
)
(Testis-expressed sequence 26 protein.)
genome : 31,506,834 - 31,549,152 (42,319)
query : 1 - 997 (997/1,113)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14.5, cyto 11.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201999)
HIX0201999
HIT000361752 (
ENST00000380473
)
(Testis-expressed sequence 26 protein.)
genome : 31,506,840 - 31,549,639 (42,800)
query : 1 - 1,478 (1,478/1,478)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14.5, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201999)
HIX0201999
HIT000583271 (
ENST00000479195
)
(Testis-expressed sequence 26 protein.)
genome : 31,506,840 - 31,507,327 (488)
query : 1 - 256 (256/256)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201999)
HIX0201999
HIT000631073 (
ENST00000531960
)
(Testis-expressed sequence 26 protein.)
genome : 31,506,862 - 31,549,153 (42,292)
query : 1 - 804 (804/804)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 11.5, cyto 10.5, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201999)
HIX0201999
HIT000630054 (
ENST00000530916
)
(Hypothetical short protein.)
genome : 31,531,095 - 31,549,637 (18,543)
query : 1 - 727 (727/727)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 7, cyto_nucl 6.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201999)
HIX0172133
HIT000531722 (
ENST00000433788
)
(Hypothetical short protein.)
genome : 31,547,426 - 31,551,760 (4,335)
query : 1 - 337 (337/337)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 12.5, cyto_nucl 10, cyto 6.5,
extr_plas 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172133)
HIX0171972
HIT000513217 (
ENST00000415283
)
(Hypothetical short protein.)
genome : 31,569,299 - 31,570,275 (977)
query : 1 - 399 (399/399)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 6, nucl 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171972)
HIX0192596
HIT000523572 (
ENST00000425638
)
(Conserved hypothetical protein.)
genome : 31,651,391 - 31,689,836 (38,446)
query : 1 - 1,082 (1,082/1,082)
12 exons
identity = 0.963
5'(1.000;1.000;0.972;0.978;0.914;1.000;0.840;
0.992;1.000;0.916;0.950;0.991)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto_nucl 6.5, cyto 5.5, nucl 4.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192596)
HIX0192596
pHIT000023070 ( pHIT000023070 )
Representative transcript
(Conserved hypothetical protein.)
genome : 31,685,851 - 31,686,359 (509)
query : 1 - 246 (246/246)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192596)
CAGE tag :
H05BC70F0103
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK087389
Bos
sp. (Cow) : ENSBTAT00000047499
Canis
sp. (Dog) : ENSCAFT00000010593
Equus
sp. (Horse) : ENSECAT00000017768
Rattus
sp. (Rat) : XM_001067264
Monodelphis
sp. (Opossum) : XM_001376918
HIX0011215
HIT000203229 (
NM_006644
)
(Heat shock protein 105 kDa; Antigen NY-CO-25; Heat shock 110 kDa protein;)
genome : 31,710,764 - 31,736,117 (25,354)
query : 1 - 3,666 (3,666/3,680)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10.5, nucl 7.5, mito 4, pero 4,
mito_pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011215)
HIX0011215
HIT000051932
(
BC037553
)
(Heat shock protein 105 kDa; Antigen NY-CO-25; Heat shock 110 kDa protein;)
genome : 31,710,764 - 31,736,052 (25,289)
query : 9 - 3,609 (3,601/3,623)
18 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.995)5'
coverage = 0.998
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10.5, nucl 7.5, mito 4, pero 4,
mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011215)
HIX0011215
HIT000056772
(
BX648125
)
(Heat shock protein 105 kDa.)
genome : 31,710,764 - 31,736,502 (25,739)
query : 1 - 3,545 (3,545/3,555)
18 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 7, cyto_plas 7, cyto_golg 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011215)
HIX0011215
HIT000533315 (
ENST00000435381
)
(Heat shock protein 105 kDa.)
genome : 31,710,762 - 31,712,705 (1,944)
query : 1 - 812 (812/812)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, extr 6, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011215)
HIX0011215
HIT000042338
(
D86956
)
Representative transcript
(Heat shock protein 105 kDa; Antigen NY-CO-25; Heat shock 110 kDa protein;)
genome : 31,710,765 - 31,736,066 (25,302)
query : 1 - 3,614 (3,614/3,614)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10.5, nucl 7.5, mito 4, pero 4,
mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011215)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK083179
Bos
sp. (Cow) : BC122574
Pongo
sp. (Orangutan) : CR860694
Danio
sp. (Zebrafish) : ENSDART00000060063
Oryzias
sp. (Medaka) : ENSORLT00000001796
Rattus
sp. (Rat) : ENSRNOT00000046712
Tetraodon
sp. (Tetraodon) : GSTENT00032245001
Takifugu
sp. (Fugu) : SINFRUT00000162292
Pan
sp. (Chimpanzee) : XM_001142849
Monodelphis
sp. (Opossum) : XM_001367307
Equus
sp. (Horse) : XM_001493517
Gallus
sp. (Chicken) : XM_417113
Canis
sp. (Dog) : XM_534515
Macaca
sp. (Macaque) : XR_014682
HIX0011215
HIT000058013
(
AB003334
)
(Heat shock protein 105 kDa; Antigen NY-CO-25; Heat shock 110 kDa protein;)
genome : 31,710,765 - 31,736,064 (25,300)
query : 1 - 3,612 (3,612/3,612)
18 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;0.993;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10.5, nucl 7.5, mito 4, pero 4,
mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011215)
HIX0011215
HIT000122275 (
ENST00000320027
)
(Heat shock protein 105 kDa; Antigen NY-CO-25; Heat shock 110 kDa protein;)
genome : 31,710,765 - 31,736,064 (25,300)
query : 1 - 3,612 (3,612/3,612)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10.5, nucl 7.5, mito 4, pero 4,
mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011215)
HIX0011215
HIT000361684 (
ENST00000380405
)
(Heat shock protein 105 kDa; Antigen NY-CO-25; Heat shock 110 kDa protein;)
genome : 31,710,765 - 31,736,064 (25,300)
query : 1 - 3,480 (3,480/3,480)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10, nucl 6.5, mito 5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011215)
HIX0011215
HIT000714519 (
ENST00000602786
)
(Heat shock protein 105 kDa.)
genome : 31,710,765 - 31,736,064 (25,300)
query : 1 - 3,488 (3,488/3,488)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10.5, nucl 7.5, mito 5, pero 3,
cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011215)
HIX0011215
HIT000361685 (
ENST00000380406
)
(Heat shock protein 105 kDa.)
genome : 31,710,765 - 31,736,056 (25,292)
query : 1 - 3,481 (3,481/3,481)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10.5, nucl 7.5, mito 5, pero 3,
cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011215)
HIX0011215
HIT000058012
(
AB003333
)
(Heat shock protein 105 kDa; Antigen NY-CO-25; Heat shock 110 kDa protein;)
genome : 31,710,765 - 31,736,032 (25,268)
query : 1 - 3,448 (3,448/3,448)
17 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.996;1.000;1.000;1.000;
0.993;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10, nucl 6.5, mito 5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011215)
HIX0011215
HIT000063498
(
AF039695
)
(Heat shock protein 105 kDa; Antigen NY-CO-25; Heat shock 110 kDa protein;)
genome : 31,710,765 - 31,735,761 (24,997)
query : 1 - 3,309 (3,309/3,309)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10.5, nucl 7.5, mito 4, pero 4,
mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011215)
HIX0011215
HIT000497054
(
AK302430
)
(Heat shock protein 105 kDa.)
genome : 31,711,058 - 31,736,525 (25,468)
query : 1 - 3,274 (3,274/3,274)
18 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 7, cyto_plas 7, cyto_golg 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011215)
HIX0011215
HIT000543207 (
ENST00000445273
)
(Heat shock protein 105 kDa.)
genome : 31,711,058 - 31,736,525 (25,468)
query : 1 - 3,274 (3,274/3,274)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 7, cyto_plas 7, cyto_golg 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011215)
HIX0011215
HIT000089578
(
BC018124
)
(Heat shock protein 105 kDa.)
genome : 31,711,101 - 31,736,075 (24,975)
query : 1 - 3,163 (3,163/3,198)
17 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10.5, nucl 7.5, mito 5, pero 3,
cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011215)
HIX0011215
HIT000057270
(
BX648623
)
(Heat shock protein 105 kDa; 42 degrees C-HSP; Heat shock 110 kDa protein; Heat shock-related 100 kDa protein E7I; HSP-E7I;)
genome : 31,711,110 - 31,726,638 (15,529)
query : 1 - 4,383 (4,383/4,403)
11 exons
identity = 0.997
3'(0.995;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, extr 4, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011215)
HIX0011215
HIT000488579
(
AK293955
)
(97 kDa heat shock protein; Heat shock protein 110;)
genome : 31,711,102 - 31,736,086 (24,985)
query : 1 - 3,245 (3,245/3,245)
18 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.996;0.993;1.000;
1.000;0.993;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.8333, nucl 17, cyto 14.5,
cyto_mito 8.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011215)
HIX0011215
HIT000496918
(
AK302294
)
(Heat shock protein 105 kDa.)
genome : 31,711,403 - 31,736,176 (24,774)
query : 1 - 2,346 (2,346/2,346)
16 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14, nucl 7, mito 2, pero 2,
mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011215)
HIX0011215
HIT000527719 (
ENST00000429785
)
(Heat shock protein 105 kDa.)
genome : 31,711,403 - 31,736,176 (24,774)
query : 1 - 2,346 (2,346/2,346)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14, nucl 7, mito 2, pero 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011215)
HIX0011215
HIT000433442
(
AK314576
)
(Heat shock protein 105 kDa; Antigen NY-CO-25; Heat shock 110 kDa protein;)
genome : 31,711,455 - 31,736,082 (24,628)
query : 1 - 2,940 (2,940/2,940)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10.5, nucl 7.5, mito 4, pero 4,
mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011215)
HIX0011215
HIT000574056 (
ENST00000469538
)
(Heat shock protein 105 kDa.)
genome : 31,712,676 - 31,713,319 (644)
query : 1 - 333 (333/333)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 14.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011215)
HIX0011215
HIT000497456
(
AK302832
)
(Heat shock protein 105 kDa.)
genome : 31,715,325 - 31,736,496 (21,172)
query : 1 - 2,177 (2,177/2,177)
15 exons
identity = 0.998
3'(1.000;0.992;1.000;1.000;1.000;0.996;0.996;
1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 14, cyto 5.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011215)
HIX0011215
HIT000497653
(
AK303029
)
(Heat shock protein 105 kDa.)
genome : 31,724,113 - 31,736,176 (12,064)
query : 1 - 932 (932/932)
7 exons
identity = 0.996
3'(1.000;0.992;1.000;1.000;0.986;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 14, cyto 10.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011215)
HIX0011215
HIT000426463
(
AK307597
)
(Heat shock protein 105 kDa.)
genome : 31,726,467 - 31,736,177 (9,711)
query : 1 - 1,003 (1,003/1,003)
5 exons
identity = 0.997
3'(0.995;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11, extr 8, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011215)
HIX0011215
HIT000430330
(
AK311464
)
(Heat shock protein 105 kDa.)
genome : 31,728,116 - 31,736,176 (8,061)
query : 1 - 1,034 (1,034/1,034)
4 exons
identity = 0.997
3'(0.996;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12, extr 7, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011215)
HIX0211133
eHIT000003663 ( ESTsASS_13_24 )
Representative transcript
(Non-protein coding transcript.)
genome : 31,738,034 - 31,742,711 (4,678)
query : 1 - 444 (444/444)
4 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211133)
ESTs used for assembly :
DB519876
HIX0011217
HIT000135937 (
ENST00000343307
)
(Beta-1,3-glucosyltransferase; Beta3Glc-T; EC=2.4.1.-; Beta-3-glycosyltransferase-like;)
genome : 31,774,073 - 31,906,413 (132,341)
query : 1 - 4,254 (4,254/4,254)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, mito 4, nucl 2, E.R. 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011217)
HIX0011217
HIT000319055 (
NM_194318
)
(Beta-1,3-glucosyltransferase; Beta3Glc-T; EC=2.4.1.-; Beta-3-glycosyltransferase-like;)
genome : 31,774,112 - 31,906,410 (132,299)
query : 1 - 4,212 (4,212/4,221)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, E.R. 5.5, E.R._golg 5.5, golg 4.5, pero 4,
lyso 2, cyto_pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011217)
HIX0011217
HIT000424070
(
AK291273
)
(Beta-1,3-glucosyltransferase; Beta3Glc-T; EC=2.4.1.-; Beta-3-glycosyltransferase-like;)
genome : 31,774,123 - 31,904,560 (130,438)
query : 1 - 2,351 (2,351/2,351)
15 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;1.000;1.000;1.000;1.000;0.992;1.000;
0.998)3'
coverage = 1.000
EC number :
EC 2.4.1.-
InterPro :
IPR003378 : Fringe-like
IPR029044 : Nucleotide-diphospho-sugar transferases
GO :
0016020 : Cellular Component : membrane
0016757 : Molecular Function : transferase activity, transferring glycosyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, E.R. 5.5, E.R._golg 5.5, golg 4.5, pero 4,
lyso 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011217)
HIX0011217
HIT000263150
(
BC068595
)
Representative transcript
(Beta-1,3-glucosyltransferase; Beta3Glc-T; EC=2.4.1.-; Beta-3-glycosyltransferase-like;)
genome : 31,774,132 - 31,905,658 (131,527)
query : 1 - 3,433 (3,433/3,467)
15 exons
identity = 0.994
5'(1.000;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;1.000;1.000;0.991;1.000;0.992;1.000;
0.992)3'
coverage = 1.000
EC number :
EC 2.4.1.-
InterPro :
IPR003378 : Fringe-like
IPR029044 : Nucleotide-diphospho-sugar transferases
GO :
0016020 : Cellular Component : membrane
0016757 : Molecular Function : transferase activity, transferring glycosyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, E.R. 5.5, E.R._golg 5.5, golg 4.5, pero 4,
lyso 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011217)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK145082
Gallus
sp. (Chicken) : BX950334
Pongo
sp. (Orangutan) : CR858147
Bos
sp. (Cow) : ENSBTAT00000047526
Oryzias
sp. (Medaka) : ENSORLT00000004919
Takifugu
sp. (Fugu) : SINFRUT00000152060
Rattus
sp. (Rat) : XM_001071932
Danio
sp. (Zebrafish) : XM_001339763
Monodelphis
sp. (Opossum) : XM_001376982
Equus
sp. (Horse) : XM_001495151
Pan
sp. (Chimpanzee) : XM_509616
Canis
sp. (Dog) : XM_543143
Danio
sp. (Zebrafish) : XM_687506
Macaca
sp. (Macaque) : XR_012519
HIX0011217
HIT000250950
(
AY190526
)
(Beta-1,3-glucosyltransferase; Beta3Glc-T; EC=2.4.1.-; Beta-3-glycosyltransferase-like;)
genome : 31,774,222 - 31,905,657 (131,436)
query : 1 - 3,350 (3,350/3,350)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;1.000;1.000;1.000;1.000;0.992;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.-
InterPro :
IPR003378 : Fringe-like
IPR029044 : Nucleotide-diphospho-sugar transferases
GO :
0016020 : Cellular Component : membrane
0016757 : Molecular Function : transferase activity, transferring glycosyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, E.R. 5.5, E.R._golg 5.5, golg 4.5, pero 4,
lyso 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011217)
HIX0011217
HIT000242208
(
AB101481
)
(Beta-1,3-glucosyltransferase; Beta3Glc-T; EC=2.4.1.-; Beta-3-glycosyltransferase-like;)
genome : 31,774,222 - 31,903,805 (129,584)
query : 1 - 1,497 (1,497/1,497)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;1.000;1.000;1.000;1.000;0.992;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.-
InterPro :
IPR003378 : Fringe-like
IPR029044 : Nucleotide-diphospho-sugar transferases
GO :
0016020 : Cellular Component : membrane
0016757 : Molecular Function : transferase activity, transferring glycosyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, E.R. 5.5, E.R._golg 5.5, golg 4.5, pero 4,
lyso 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011217)
HIX0011217
HIT000098561
(
BC047395
)
(Beta-1,3-glucosyltransferase; Beta3Glc-T; EC=2.4.1.-; Beta-3-glycosyltransferase-like;)
genome : 31,834,535 - 31,863,942 (29,408)
query : 1 - 3,056 (3,056/3,076)
12 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.996;1.000;
1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 2.4.1.-
InterPro :
IPR003378 : Fringe-like
GO :
0016020 : Cellular Component : membrane
0016757 : Molecular Function : transferase activity, transferring glycosyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 9, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011217)
HIX0011217
HIT000092407
(
BC031597
)
(Beta-1,3-glucosyltransferase; Beta3Glc-T; EC=2.4.1.-; Beta-3-glycosyltransferase-like;)
genome : 31,834,543 - 31,904,124 (69,582)
query : 1 - 1,737 (1,737/1,775)
12 exons
identity = 0.998
5'(0.987;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;1.000;0.998)3'
coverage = 0.999
EC number :
EC 2.4.1.-
InterPro :
IPR003378 : Fringe-like
GO :
0016020 : Cellular Component : membrane
0016757 : Molecular Function : transferase activity, transferring glycosyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17.5, cyto_mito 11.1667, mito_nucl 11.1667,
cyto_nucl 4.66667, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011217)
HIX0011217
HIT000566526 (
ENST00000461652
)
(Beta-1,3-glucosyltransferase; Beta3Glc-T; EC=2.4.1.-; Beta-3-glycosyltransferase-like;)
genome : 31,834,544 - 31,858,892 (24,349)
query : 1 - 811 (811/811)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 9, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011217)
HIX0172293
HIT000553689 (
ENST00000455755
)
(Conserved hypothetical protein.)
genome : 31,885,426 - 31,887,058 (1,633)
query : 1 - 950 (950/950)
2 exons
identity = 0.997
3'(0.992;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172293)
HIX0172293
HIT000439067
(
DQ572536
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,885,623 - 31,885,652 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172293)
HIX0154948
HIT000436963
(
DQ570432
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,887,176 - 31,887,205 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0154948)
HIX0130781
HIT000451003
(
DQ584472
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,891,412 - 31,891,440 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130781)
HIX0011217
HIT000056579
(
BX647932
)
(Beta-1,3-glucosyltransferase; Beta3Glc-T; EC=2.4.1.-; Beta-3-glycosyltransferase-like;)
genome : 31,897,529 - 31,905,657 (8,129)
query : 2 - 2,518 (2,517/2,538)
2 exons
identity = 0.994
5'(0.998;0.993)3'
coverage = 0.999
EC number :
EC 2.4.1.-
InterPro :
IPR003378 : Fringe-like
GO :
0016020 : Cellular Component : membrane
0016757 : Molecular Function : transferase activity, transferring glycosyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17.5, cyto_mito 11.1667, mito_nucl 11.1667,
cyto_nucl 4.66667, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011217)
HIX0011217
HIT000019834
(
AK094979
)
(Beta-1,3-glucosyltransferase; Beta3Glc-T; EC=2.4.1.-; Beta-3-glycosyltransferase-like;)
genome : 31,897,948 - 31,906,405 (8,458)
query : 1 - 2,847 (2,847/2,847)
2 exons
identity = 0.993
5'(1.000;0.993)3'
coverage = 1.000
EC number :
EC 2.4.1.-
InterPro :
IPR003378 : Fringe-like
GO :
0016020 : Cellular Component : membrane
0016757 : Molecular Function : transferase activity, transferring glycosyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12, mito 8, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011217)
HIX0011217
HIT000092522
(
BC032021
)
(Hypothetical short protein.)
genome : 31,903,944 - 31,905,674 (1,731)
query : 1 - 1,726 (1,726/1,741)
1 exon
identity = 0.991
5'(0.991)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 8.5, cyto_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011217)
HIX0130943
HIT000466046
(
DQ599515
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,909,481 - 31,909,510 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130943)
HIX0155034
HIT000462029
(
DQ595498
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,915,524 - 31,915,553 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0155034)
HIX0155062
HIT000468464
(
DQ601933
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,921,544 - 31,921,573 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0155062)
HIX0130876
HIT000458690
(
DQ592159
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,921,985 - 31,922,015 (31)
query : 1 - 31 (31/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130876)
HIX0130789
HIT000451588
(
DQ585057
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,923,712 - 31,923,743 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130789)
HIX0130746
HIT000448188
(
DQ581657
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,924,129 - 31,924,156 (28)
query : 1 - 28 (28/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.933
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130746)
HIX0130754
HIT000448724
(
DQ582193
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,924,177 - 31,924,205 (29)
query : 1 - 29 (29/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.935
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130754)
HIX0130963
HIT000467736
(
DQ601205
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,924,616 - 31,924,645 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130963)
HIX0130824
HIT000455537
(
DQ589006
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,927,209 - 31,927,238 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130824)
HIX0171899
HIT000439823_04
(
DQ573292
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,927,257 - 31,927,286 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171899)
HIX0130627
HIT000437097
(
DQ570566
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,927,297 - 31,927,325 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130627)
HIX0130717
HIT000445487
(
DQ578956
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,928,447 - 31,928,476 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130717)
HIX0130850
HIT000457250
(
DQ590719
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,928,479 - 31,928,508 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130850)
HIX0130952
HIT000466713
(
DQ600182
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,929,443 - 31,929,472 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130952)
HIX0155060
HIT000468351
(
DQ601820
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,929,725 - 31,929,754 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0155060)
HIX0130569
HIT000453083
(
DQ586552
)
(Non-protein coding transcript.)
genome : 31,929,957 - 31,929,985 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130569)
HIX0130569
HIT000461981
(
DQ595450
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,929,980 - 31,930,009 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130569)
HIX0155057
HIT000467703
(
DQ601172
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,930,397 - 31,930,426 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0155057)
HIX0130766
HIT000449694
(
DQ583163
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,930,777 - 31,930,806 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130766)
HIX0130670
HIT000440222
(
DQ573691
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,931,614 - 31,931,643 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130670)
HIX0155046
HIT000465893
(
DQ599362
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,932,257 - 31,932,286 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0155046)
HIX0130814
HIT000454061
(
DQ587530
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,933,074 - 31,933,104 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130814)
HIX0130695
HIT000443801
(
DQ577270
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,933,122 - 31,933,151 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130695)
HIX0155035
HIT000462109
(
DQ595578
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,933,752 - 31,933,781 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0155035)
HIX0130629
HIT000437238
(
DQ570707
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,934,307 - 31,934,338 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130629)
HIX0130760
HIT000449149
(
DQ582618
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,936,681 - 31,936,711 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130760)
HIX0130674
HIT000440661
(
DQ574130
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,936,734 - 31,936,763 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130674)
HIX0154947
HIT000436835
(
DQ570304
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,936,978 - 31,937,008 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0154947)
HIX0130555
HIT000443360
(
DQ576829
)
(Non-protein coding transcript.)
genome : 31,937,448 - 31,937,476 (29)
query : 3 - 31 (29/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.935
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130555)
HIX0130555
HIT000448218
(
DQ581687
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,937,448 - 31,937,477 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130555)
HIX0130732
HIT000446784
(
DQ580253
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,937,534 - 31,937,563 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130732)
HIX0154982
HIT000445976
(
DQ579445
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,937,815 - 31,937,846 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0154982)
HIX0130940
HIT000465769
(
DQ599238
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,938,168 - 31,938,197 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130940)
HIX0130752
HIT000448508
(
DQ581977
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,938,333 - 31,938,364 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130752)
HIX0130795
HIT000452024
(
DQ585493
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,938,529 - 31,938,559 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130795)
HIX0130771
HIT000450061
(
DQ583530
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,938,616 - 31,938,645 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130771)
HIX0130915
HIT000462529
(
DQ595998
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,938,785 - 31,938,813 (29)
query : 3 - 31 (29/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.935
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130915)
HIX0130672
HIT000440501
(
DQ573970
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,938,905 - 31,938,934 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130672)
HIX0130662
HIT000439634
(
DQ573103
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,939,339 - 31,939,368 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130662)
HIX0130879
HIT000458711
(
DQ592180
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,939,789 - 31,939,818 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130879)
HIX0154952
HIT000437270
(
DQ570739
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,939,848 - 31,939,877 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0154952)
HIX0155010
HIT000452763
(
DQ586232
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,939,880 - 31,939,909 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0155010)
HIX0130573
HIT000456976
(
DQ590445
)
(Non-protein coding transcript.)
genome : 31,940,116 - 31,940,144 (29)
query : 3 - 31 (29/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.935
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130573)
HIX0130573
HIT000458550
(
DQ592019
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,940,116 - 31,940,145 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130573)
HIX0130885
HIT000459735
(
DQ593204
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,940,296 - 31,940,326 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130885)
HIX0130574
HIT000459027
(
DQ592496
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,940,561 - 31,940,591 (31)
query : 1 - 31 (31/31)
1 exon
identity = 0.968
3'(0.968)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130574)
HIX0130574
HIT000466633
(
DQ600102
)
(Non-protein coding transcript.)
genome : 31,940,562 - 31,940,591 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130574)
HIX0130667
HIT000439988
(
DQ573457
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,940,740 - 31,940,769 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130667)
HIX0155054
HIT000466711
(
DQ600180
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,941,384 - 31,941,414 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0155054)
HIX0130745
HIT000447918
(
DQ581387
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,941,512 - 31,941,543 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130745)
HIX0154906
HIT000459513
(
DQ592982
)
(Non-protein coding transcript.)
genome : 31,942,086 - 31,942,115 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0154906)
HIX0154906
HIT000442060
(
DQ575529
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,942,087 - 31,942,116 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0154906)
HIX0130969
HIT000468448
(
DQ601917
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,942,148 - 31,942,178 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130969)
HIX0130862
HIT000457754
(
DQ591223
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,942,548 - 31,942,579 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130862)
HIX0130691
HIT000443127
(
DQ576596
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,942,679 - 31,942,709 (31)
query : 1 - 31 (31/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130691)
HIX0154909
HIT000451747
(
DQ585216
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,942,823 - 31,942,853 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0154909)
HIX0154909
HIT000463952
(
DQ597421
)
(Non-protein coding transcript.)
genome : 31,942,823 - 31,942,852 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0154909)
HIX0130882
HIT000459022
(
DQ592491
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,942,867 - 31,942,897 (31)
query : 1 - 31 (31/31)
1 exon
identity = 0.968
3'(0.968)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130882)
HIX0154905
HIT000446337
(
DQ579806
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,942,965 - 31,942,995 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0154905)
HIX0154905
HIT000439080
(
DQ572549
)
(Non-protein coding transcript.)
genome : 31,942,974 - 31,943,003 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0154905)
HIX0155049
HIT000466184
(
DQ599653
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,943,012 - 31,943,042 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0155049)
HIX0130902
HIT000461582
(
DQ595051
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,944,400 - 31,944,429 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130902)
HIX0130944
HIT000466109
(
DQ599578
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,944,790 - 31,944,820 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130944)
HIX0130877
HIT000458700
(
DQ592169
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,945,884 - 31,945,913 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130877)
HIX0130731
HIT000446651
(
DQ580120
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,946,813 - 31,946,843 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130731)
HIX0154904
HIT000436818
(
DQ570287
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,946,954 - 31,946,983 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0154904)
HIX0154904
HIT000453996
(
DQ587465
)
(Non-protein coding transcript.)
genome : 31,946,970 - 31,946,999 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0154904)
HIX0130630
HIT000437297
(
DQ570766
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,947,024 - 31,947,054 (31)
query : 1 - 31 (31/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130630)
HIX0130625
HIT000436742
(
DQ570211
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,948,005 - 31,948,034 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130625)
HIX0130947
HIT000466283
(
DQ599752
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,948,297 - 31,948,327 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130947)
HIX0130724
HIT000445919
(
DQ579388
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,948,918 - 31,948,948 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130724)
HIX0130966
HIT000468096
(
DQ601565
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,962,792 - 31,962,821 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130966)
HIX0130765
HIT000449681
(
DQ583150
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,963,031 - 31,963,060 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130765)
HIX0037313
HIT000079149
(
AF403384
)
Representative transcript
(Relaxin receptor 2; G-protein coupled receptor 106; G-protein coupled receptor affecting testicular descent; Leucine-rich repeat-containing G-protein coupled receptor 8; Relaxin family peptide receptor 2;)
genome : 32,313,674 - 32,377,009 (63,336)
query : 30 - 2,838 (2,809/2,838)
18 exons
identity = 0.999
5'(0.988;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.986;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.990
InterPro :
IPR000372 : Leucine-rich repeat-containing N-terminal
IPR001611 : Leucine-rich repeat
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
IPR003591 : Leucine-rich repeat, typical subtype
IPR008112 : Relaxin receptor
IPR023415 : Low-density lipoprotein (LDL) receptor class A, conserved site
GO :
0004930 : Molecular Function : G-protein coupled receptor activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037313)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF346501
Canis
sp. (Dog) : AY749634
Rattus
sp. (Rat) : AY906861
Danio
sp. (Zebrafish) : BC054930
Danio
sp. (Zebrafish) : CU468783
Danio
sp. (Zebrafish) : CU638787
Macaca
sp. (Macaque) : EF088291
Oryzias
sp. (Medaka) : ENSORLT00000004292
Pongo
sp. (Orangutan) : ENSPPYT00000006225
Pan
sp. (Chimpanzee) : ENSPTRT00000010597
Tetraodon
sp. (Tetraodon) : GSTENT00018853001
Takifugu
sp. (Fugu) : SINFRUT00000159568
Monodelphis
sp. (Opossum) : XM_001377022
Bos
sp. (Cow) : XR_028620
HIX0037313
HIT000361593 (
ENST00000380314
)
(Relaxin receptor 2 isoform 2.)
genome : 32,313,674 - 32,377,009 (63,336)
query : 1 - 2,736 (2,736/2,736)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037313)
HIX0037313
HIT000115062 (
ENST00000298386
)
(Relaxin receptor 2; G-protein coupled receptor 106; G-protein coupled receptor affecting testicular descent; Leucine-rich repeat-containing G-protein coupled receptor 8; Relaxin family peptide receptor 2;)
genome : 32,313,679 - 32,377,009 (63,331)
query : 1 - 2,803 (2,803/2,803)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037313)
HIX0037313
HIT000212086 (
NM_130806
)
(Relaxin receptor 2; G-protein coupled receptor 106; G-protein coupled receptor affecting testicular descent; Leucine-rich repeat-containing G-protein coupled receptor 8; Relaxin family peptide receptor 2;)
genome : 32,313,679 - 32,377,009 (63,331)
query : 1 - 2,803 (2,803/2,803)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037313)
HIX0037313
HIT000654238 (
NM_001166058
)
(Relaxin receptor 2 isoform 2.)
genome : 32,313,679 - 32,377,009 (63,331)
query : 1 - 2,731 (2,731/2,731)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037313)
HIX0037313
HIT000079889
(
AF453828
)
(Relaxin receptor 2; G-protein coupled receptor 106; G-protein coupled receptor affecting testicular descent; Leucine-rich repeat-containing G-protein coupled receptor 8; Relaxin family peptide receptor 2;)
genome : 32,313,680 - 32,376,643 (62,964)
query : 1 - 2,436 (2,436/2,436)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.986;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000372 : Leucine-rich repeat-containing N-terminal
IPR001611 : Leucine-rich repeat
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
IPR003591 : Leucine-rich repeat, typical subtype
IPR008112 : Relaxin receptor
IPR023415 : Low-density lipoprotein (LDL) receptor class A, conserved site
GO :
0004930 : Molecular Function : G-protein coupled receptor activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037313)
HIX0037313
HIT000332535
(
AY899851
)
(Relaxin receptor 2 isoform 2.)
genome : 32,313,750 - 32,376,542 (62,793)
query : 1 - 2,193 (2,193/2,193)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.986;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000372 : Leucine-rich repeat-containing N-terminal
IPR001611 : Leucine-rich repeat
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
IPR003591 : Leucine-rich repeat, typical subtype
IPR008112 : Relaxin receptor
IPR023415 : Low-density lipoprotein (LDL) receptor class A, conserved site
GO :
0004930 : Molecular Function : G-protein coupled receptor activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037313)
HIX0011218
HIT000563224 (
NR_027062
)
(Conserved hypothetical protein.)
genome : 32,420,920 - 32,533,721 (112,802)
query : 1 - 575 (575/575)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011218)
HIX0011218
HIT000039276
(
BC021729
)
Representative transcript
(Putative elongation factor 1-delta-like protein; Putative EF-1-delta-like pseudogene 3 protein;)
genome : 32,420,978 - 32,527,609 (106,632)
query : 7 - 1,313 (1,307/1,330)
4 exons
identity = 0.997
5'(0.990;1.000;1.000;0.997)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13.5, nucl 12.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011218)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000023501
Pongo
sp. (Orangutan) : ENSPPYT00000006226
Pan
sp. (Chimpanzee) : ENSPTRT00000010599
HIX0011218
HIT000526717 (
ENST00000428783
)
(Putative elongation factor 1-delta-like protein; Putative EF-1-delta-like pseudogene 3 protein;)
genome : 32,420,978 - 32,527,609 (106,632)
query : 1 - 1,309 (1,309/1,309)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13.5, nucl 12.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011218)
HIX0037622
HIT000220157
(
U50524
)
Representative transcript
(Hypothetical protein.)
genome : 32,521,970 - 32,524,295 (2,326)
query : 1 - 2,325 (2,325/2,330)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037622)
HIX0011218
HIT000028680
(
AL833768
)
(Putative elongation factor 1-delta-like protein; Putative EF-1-delta-like pseudogene 3 protein;)
genome : 32,524,296 - 32,527,564 (3,269)
query : 1 - 3,284 (3,284/3,298)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13.5, nucl 12.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011218)
HIX0011218
HIT000593970 (
ENST00000490410
)
(Putative elongation factor 1-delta-like protein; Putative EF-1-delta-like pseudogene 3 protein;)
genome : 32,524,296 - 32,527,564 (3,269)
query : 1 - 3,269 (3,269/3,283)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13.5, nucl 12.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011218)
HIX0011218
HIT000388512
(
BC125059
)
(Putative elongation factor 1-delta-like protein; Putative EF-1-delta-like pseudogene 3 protein;)
genome : 32,525,232 - 32,527,156 (1,925)
query : 1 - 1,925 (1,925/1,925)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13.5, nucl 12.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011218)
HIX0011218
HIT000388513
(
BC125060
)
(Putative elongation factor 1-delta-like protein; Putative EF-1-delta-like pseudogene 3 protein;)
genome : 32,525,232 - 32,527,156 (1,925)
query : 1 - 1,922 (1,922/1,922)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13.5, nucl 12.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011218)
HIX0011218
HIT000679076 (
ENST00000566025
)
(Putative elongation factor 1-delta-like protein; Putative EF-1-delta-like pseudogene 3 protein;)
genome : 32,526,717 - 32,527,498 (782)
query : 1 - 782 (782/782)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13.5, nucl 12.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011218)
HIX0037623
HIT000220158
(
U50525
)
Representative transcript
(Hypothetical short protein.)
genome : 32,534,464 - 32,536,088 (1,625)
query : 1 - 1,624 (1,624/1,626)
1 exon
identity = 0.986
3'(0.986)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 8, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037623)
HIX0172189
HIT000539593 (
ENST00000441659
)
(Non-protein coding transcript.)
genome : 32,559,822 - 32,565,134 (5,313)
query : 1 - 149 (149/149)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172189)
HIX0037303
HIT000093674
(
BC035084
)
Representative transcript
(Conserved hypothetical protein.)
genome : 32,598,197 - 32,605,776 (7,580)
query : 6 - 2,377 (2,372/2,392)
4 exons
identity = 0.998
3'(0.998;1.000;0.989;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 10, nucl 8.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037303)
HIX0037303
HIT000067298
(
AF086419
)
(Non-protein coding transcript.)
genome : 32,599,452 - 32,599,998 (547)
query : 1 - 547 (547/556)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037303)
HIX0037303
HIT000526353 (
ENST00000428419
)
(Conserved hypothetical protein.)
genome : 32,599,451 - 32,605,776 (6,326)
query : 1 - 1,115 (1,115/1,115)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037303)
HIX0220768
HIT000568356 (
ENST00000463566
)
(Hypothetical short protein.)
genome : 32,605,692 - 32,612,757 (7,066)
query : 1 - 502 (502/502)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 13, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220768)
HIX0220768
HIT000056873
(
BX648226
)
Representative transcript
(Hypothetical short protein.)
genome : 32,612,375 - 32,614,414 (2,040)
query : 1 - 2,041 (2,041/2,055)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 6.5, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220768)
HIX0220768
HIT000220159
(
U50526
)
(Hypothetical short protein.)
genome : 32,613,143 - 32,614,297 (1,155)
query : 13 - 1,180 (1,168/1,180)
1 exon
identity = 0.968
5'(0.968)3'
coverage = 0.990
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220768)
HIX0037626
HIT000220171
(
U50538
)
Representative transcript
(Hypothetical short protein.)
genome : 32,632,895 - 32,633,647 (753)
query : 1 - 753 (753/753)
1 exon
identity = 0.972
5'(0.972)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 12, cyto_nucl 5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037626)
HIX0220845
HIT000533980 (
ENST00000436046
)
(Conserved hypothetical protein.)
genome : 32,635,001 - 32,691,607 (56,607)
query : 1 - 691 (691/691)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11, extr 7, nucl 5.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220845)
HIX0220767
HIT000054455
(
BX537670
)
Representative transcript
(Conserved hypothetical protein.)
genome : 32,828,285 - 32,852,979 (24,695)
query : 3 - 5,609 (5,607/5,632)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;0.999;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220767)
HIX0220767
HIT000714378 (
ENST00000602645
)
(Conserved hypothetical protein.)
genome : 32,828,285 - 32,852,982 (24,698)
query : 1 - 5,611 (5,611/5,611)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220767)
HIX0220767
HIT000581847 (
ENST00000477712
)
(Conserved hypothetical protein.)
genome : 32,836,526 - 32,852,685 (16,160)
query : 1 - 704 (704/711)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.990
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, extr 11, nucl 10.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220767)
HIX0220833
HIT000361496 (
ENST00000380217
)
(Conserved hypothetical protein.)
genome : 32,861,988 - 32,869,640 (7,653)
query : 1 - 650 (650/650)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto 9.5, cyto_nucl 9.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220833)
HIX0037495
HIT000516010 (
ENST00000418076
)
(Hypothetical short protein.)
genome : 32,872,291 - 32,872,849 (559)
query : 1 - 437 (437/437)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 13, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037495)
HIX0037495
HIT000094337
(
BC036296
)
Representative transcript
(Hypothetical protein.)
genome : 32,872,394 - 32,873,257 (864)
query : 1 - 864 (864/898)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 23, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037495)
HIX0037608
HIT000632569 (
ENST00000533490
)
(ZAR1-like protein.)
genome : 32,877,837 - 32,889,481 (11,645)
query : 1 - 1,564 (1,564/1,564)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 13, extr 7, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037608)
HIX0037608
HIT000137738 (
ENST00000345108
)
(ZAR1-like protein.)
genome : 32,877,908 - 32,886,091 (8,184)
query : 1 - 1,103 (1,103/1,103)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 13, extr 7, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037608)
HIX0037608
HIT000503219
(
BC146965
)
Representative transcript
(ZAR1-like protein.)
genome : 32,877,908 - 32,886,091 (8,184)
query : 1 - 1,103 (1,103/1,103)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026775 : Zygote arrest protein 1
IPR027377 : Zinc-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 13, extr 7, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037608)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : AJ936934
Danio
sp. (Zebrafish) : BC155092
Equus
sp. (Horse) : ENSECAT00000014761
Mus
sp. (Mouse) : ENSMUST00000070778
Pongo
sp. (Orangutan) : ENSPPYT00000006231
Rattus
sp. (Rat) : XM_001062595
Gallus
sp. (Chicken) : XM_001234451
Monodelphis
sp. (Opossum) : XM_001377049
Canis
sp. (Dog) : XM_534509
HIX0037608
HIT000560416 (
NM_001136571
)
(ZAR1-like protein.)
genome : 32,877,908 - 32,886,091 (8,184)
query : 1 - 1,103 (1,103/1,103)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 13, extr 7, cyto 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037608)
HIX0037608
HIT000503212
(
BC146956
)
(ZAR1-like protein.)
genome : 32,877,908 - 32,886,089 (8,182)
query : 1 - 1,101 (1,101/1,101)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026775 : Zygote arrest protein 1
IPR027377 : Zinc-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 13, extr 7, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037608)
HIX0037331
HIT000361431 (
ENST00000380152
)
(Breast cancer type 2 susceptibility protein; Fanconi anemia group D1 protein;)
genome : 32,889,611 - 32,973,347 (83,737)
query : 1 - 10,930 (10,930/10,930)
27 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.983;0.989;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037331)
HIX0037331
HIT000219873
(
U43746
)
Representative transcript
(Breast cancer type 2 susceptibility protein; Fanconi anemia group D1 protein;)
genome : 32,889,617 - 32,973,805 (84,189)
query : 2 - 10,986 (10,985/10,987)
28 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998;1.000;1.000;1.000;0.998;
1.000;1.000;0.983;0.989;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.998;0.883)3'
coverage = 1.000
InterPro :
IPR002093 : BRCA2 repeat
IPR012340 : Nucleic acid-binding, OB-fold
IPR015187 : BRCA2, oligonucleotide/oligosaccharide-binding 1
IPR015188 : BRCA2, oligonucleotide/oligosaccharide-binding 3
IPR015205 : Tower
IPR015252 : Breast cancer type 2 susceptibility protein, helical domain
IPR015525 : Breast cancer type 2 susceptibility protein
GO :
0000724 : Biological Process : double-strand break repair via homologous recombination
0003697 : Molecular Function : single-stranded DNA binding
0005515 : Molecular Function : protein binding
0006281 : Biological Process : DNA repair
0006302 : Biological Process : double-strand break repair
0006310 : Biological Process : DNA recombination
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037331)
Ortholog candidate ( ->
Evola
)
Canis
sp. (Dog) : AB043895
Gallus
sp. (Chicken) : AB066374
Danio
sp. (Zebrafish) : EF088196
Monodelphis
sp. (Opossum) : EF508680
Pongo
sp. (Orangutan) : ENSPPYT00000006232
Pan
sp. (Chimpanzee) : ENSPTRT00000010605
Mus
sp. (Mouse) : U65594
Rattus
sp. (Rat) : U89653
Equus
sp. (Horse) : XM_001494116
Bos
sp. (Cow) : XR_028054
HIX0037331
HIT000197110 (
NM_000059
)
(Breast cancer type 2 susceptibility protein; Fanconi anemia group D1 protein;)
genome : 32,889,617 - 32,973,809 (84,193)
query : 1 - 11,386 (11,386/11,386)
27 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.998;
1.000;1.000;0.983;0.989;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16.5, cyto 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037331)
HIX0037331
HIT000643500 (
ENST00000544455
)
(Breast cancer type 2 susceptibility protein; Fanconi anemia group D1 protein;)
genome : 32,889,617 - 32,973,805 (84,189)
query : 1 - 10,984 (10,984/10,984)
28 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.983;0.989;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.896)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037331)
HIX0037331
HIT000091203
(
BC026160
)
(Breast cancer type 2 susceptibility protein.)
genome : 32,889,642 - 32,907,421 (17,780)
query : 6 - 2,009 (2,004/2,025)
10 exons
identity = 0.998
5'(1.000;0.963;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR015525 : Breast cancer type 2 susceptibility protein
GO :
0000724 : Biological Process : double-strand break repair via homologous recombination
0006281 : Biological Process : DNA repair
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037331)
HIX0037331
HIT000098666
(
BC047568
)
(Breast cancer type 2 susceptibility protein.)
genome : 32,889,642 - 32,907,421 (17,780)
query : 1 - 2,004 (2,004/2,020)
10 exons
identity = 0.998
5'(1.000;0.963;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR015525 : Breast cancer type 2 susceptibility protein
GO :
0000724 : Biological Process : double-strand break repair via homologous recombination
0006281 : Biological Process : DNA repair
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037331)
HIX0037331
HIT000630032 (
ENST00000530893
)
(Breast cancer type 2 susceptibility protein.)
genome : 32,889,642 - 32,907,428 (17,787)
query : 1 - 2,011 (2,011/2,011)
10 exons
identity = 0.998
5'(1.000;0.963;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 16.5, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037331)
HIX0037331
HIT000393985
(
DQ897648
)
(Breast cancer type 2 susceptibility protein; Fanconi anemia group D1 protein;)
genome : 32,890,598 - 32,936,796 (46,199)
query : 1 - 7,950 (7,950/7,950)
16 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998;1.000;1.000;1.000;0.998;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002093 : BRCA2 repeat
IPR015252 : Breast cancer type 2 susceptibility protein, helical domain
IPR015525 : Breast cancer type 2 susceptibility protein
GO :
0000724 : Biological Process : double-strand break repair via homologous recombination
0003697 : Molecular Function : single-stranded DNA binding
0005515 : Molecular Function : protein binding
0006281 : Biological Process : DNA repair
0006302 : Biological Process : double-strand break repair
0006310 : Biological Process : DNA recombination
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037331)
HIX0037331
HIT000722395
(
JX480474
)
(Breast cancer type 2 susceptibility protein; Fanconi anemia group D1 protein;)
genome : 32,911,610 - 32,911,747 (138)
query : 1 - 137 (137/137)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037331)
HIX0037331
HIT000722398
(
JX480477
)
(Breast cancer type 2 susceptibility protein; Fanconi anemia group D1 protein;)
genome : 32,912,516 - 32,912,713 (198)
query : 1 - 197 (197/197)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037331)
HIX0037331
HIT000722396
(
JX480475
)
(Breast cancer type 2 susceptibility protein; Fanconi anemia group D1 protein;)
genome : 32,912,990 - 32,913,127 (138)
query : 1 - 136 (136/136)
1 exon
identity = 0.986
5'(0.986)3'
coverage = 1.000
InterPro :
IPR002093 : BRCA2 repeat
GO :
0005515 : Molecular Function : protein binding
0006302 : Biological Process : double-strand break repair
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27.5, cyto_nucl 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037331)
HIX0037331
HIT000722393
(
JX480472
)
(Breast cancer type 2 susceptibility protein; Fanconi anemia group D1 protein;)
genome : 32,913,611 - 32,913,769 (159)
query : 1 - 153 (153/153)
1 exon
identity = 0.962
5'(0.962)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 9, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037331)
HIX0037331
HIT000722391
(
JX480470
)
(Breast cancer type 2 susceptibility protein; Fanconi anemia group D1 protein;)
genome : 32,914,511 - 32,914,645 (135)
query : 1 - 136 (136/136)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 11.5, nucl 10.5, extr 5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037331)
HIX0037331
HIT000722392
(
JX480471
)
(Breast cancer type 2 susceptibility protein; Fanconi anemia group D1 protein;)
genome : 32,929,332 - 32,936,830 (7,499)
query : 1 - 265 (265/278)
2 exons
identity = 0.996
5'(0.989;1.000)3'
coverage = 0.953
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.5, extr 9, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037331)
HIX0037331
HIT000722390
(
JX480469
)
(Breast cancer type 2 susceptibility protein; Fanconi anemia group D1 protein;)
genome : 32,930,567 - 32,930,746 (180)
query : 1 - 181 (181/181)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
InterPro :
IPR015252 : Breast cancer type 2 susceptibility protein, helical domain
GO :
0000724 : Biological Process : double-strand break repair via homologous recombination
0003697 : Molecular Function : single-stranded DNA binding
0006310 : Biological Process : DNA recombination
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 11.5, cyto_nucl 10, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037331)
HIX0037331
HIT000722397
(
JX480476
)
(Conserved hypothetical protein.)
genome : 32,936,661 - 32,936,830 (170)
query : 1 - 170 (170/170)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, cyto 11.5, cyto_nucl 9, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037331)
HIX0037331
HIT000627933 (
ENST00000528762
)
(Breast cancer type 2 susceptibility protein; Fanconi anemia group D1 protein;)
genome : 32,945,108 - 32,953,632 (8,525)
query : 1 - 495 (495/495)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 9.5, mito 9, nucl 7.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037331)
HIX0037331
HIT000574584 (
ENST00000470094
)
(Breast cancer type 2 susceptibility protein; Fanconi anemia group D1 protein;)
genome : 32,953,977 - 32,972,409 (18,433)
query : 1 - 842 (842/842)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, nucl 8, mito 6, cyto_golg 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037331)
HIX0131026
HIT000483466 (
ENST00000400497
)
(Tetratricopeptide-like helical domain containing protein.)
genome : 32,958,797 - 32,960,245 (1,449)
query : 1 - 1,449 (1,449/1,449)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0131026)
HIX0037331
HIT000722399
(
JX480478
)
(Breast cancer type 2 susceptibility protein; Fanconi anemia group D1 protein;)
genome : 32,968,828 - 32,969,068 (241)
query : 1 - 240 (240/240)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
InterPro :
IPR012340 : Nucleic acid-binding, OB-fold
IPR015188 : BRCA2, oligonucleotide/oligosaccharide-binding 3
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, extr 5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037331)
HIX0037331
HIT000632850 (
ENST00000533776
)
(Breast cancer type 2 susceptibility protein; Fanconi anemia group D1 protein;)
genome : 32,970,946 - 32,972,585 (1,640)
query : 1 - 523 (523/523)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 13, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037331)
HIX0037331
HIT000722394
(
JX480473
)
(Hypothetical protein.)
genome : 32,972,737 - 32,972,874 (138)
query : 1 - 138 (138/138)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 11, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037331)
HIX0011222
HIT000211455 (
NM_052818
)
(Conserved hypothetical protein.)
genome : 32,974,860 - 33,002,315 (27,456)
query : 1 - 3,047 (3,047/3,051)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 13.5, extr 7, nucl 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000397910 (
NM_001079691
)
(Conserved hypothetical protein.)
genome : 32,974,860 - 33,002,315 (27,456)
query : 1 - 3,039 (3,039/3,043)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 18, nucl 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000361409 (
ENST00000380130
)
(Conserved hypothetical protein.)
genome : 32,974,861 - 33,002,315 (27,455)
query : 1 - 3,046 (3,046/3,046)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 13.5, extr 7, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000361418 (
ENST00000380139
)
(Conserved hypothetical protein.)
genome : 32,975,713 - 33,002,270 (26,558)
query : 1 - 2,141 (2,141/2,141)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 18, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000057156
(
BX648509
)
(NEDD4-binding protein 2-like 1 isoform 1.)
genome : 32,975,802 - 32,985,113 (9,312)
query : 1 - 5,030 (5,030/5,050)
4 exons
identity = 0.995
3'(0.990;1.000;1.000;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14, extr 5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000220160
(
U50527
)
(NEDD4-binding protein 2; N4BP2; EC=3.-.-.-; BCL-3-binding protein;)
genome : 32,975,814 - 33,002,270 (26,457)
query : 1 - 2,034 (2,034/2,056)
5 exons
identity = 0.990
3'(0.992;1.000;0.989;1.000;0.965)5'
coverage = 1.000
EC number :
EC 3.-.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 16, cyto_plas 13, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000250091
(
AL049787
)
(NEDD4-binding protein 2-like 1 isoform 2.)
genome : 32,975,814 - 33,002,270 (26,457)
query : 1 - 2,041 (2,041/2,041)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 18, nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000250092
(
AL049788
)
(NEDD4-binding protein 2; N4BP2; EC=3.-.-.-; BCL-3-binding protein;)
genome : 32,975,814 - 32,990,840 (15,027)
query : 1 - 2,107 (2,107/2,107)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.-.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 11, nucl 10, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000564675 (
ENST00000459716
)
(Conserved hypothetical protein.)
genome : 32,975,814 - 32,990,840 (15,027)
query : 1 - 2,107 (2,107/2,107)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 11, nucl 10, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000629767 (
ENST00000530622
)
(Conserved hypothetical protein.)
genome : 32,975,814 - 32,985,743 (9,930)
query : 1 - 1,897 (1,897/1,897)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 11, nucl 10, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000039408
(
BC022188
)
(NEDD4-binding protein 2-like 1 isoform 2.)
genome : 32,975,873 - 33,002,261 (26,389)
query : 1 - 1,968 (1,968/1,983)
5 exons
identity = 0.994
3'(0.992;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 18, nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000220506
(
U57962
)
(Conserved hypothetical protein.)
genome : 32,975,869 - 32,978,252 (2,384)
query : 1 - 2,402 (2,402/2,404)
1 exon
identity = 0.966
3'(0.966)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 14, cyto 7.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000250089
(
AL049785
)
(NEDD4-binding protein 2-like 1 isoform 1.)
genome : 32,975,952 - 33,002,270 (26,319)
query : 1 - 883 (883/883)
6 exons
identity = 0.991
3'(1.000;0.976;1.000;1.000;1.000;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 13.5, extr 7, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000250090
(
AL049786
)
(NEDD4-binding protein 2-like 1 isoform 1.)
genome : 32,975,953 - 33,002,270 (26,318)
query : 1 - 904 (904/904)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 13.5, extr 7, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000361412 (
ENST00000380133
)
(Conserved hypothetical protein.)
genome : 32,975,953 - 33,002,270 (26,318)
query : 1 - 903 (903/903)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 13.5, extr 7, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000598841 (
ENST00000495479
)
(Conserved hypothetical protein.)
genome : 32,975,954 - 33,002,151 (26,198)
query : 1 - 541 (541/541)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, nucl 3, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000388503
(
BC125050
)
(Conserved hypothetical protein.)
genome : 32,976,193 - 32,981,853 (5,661)
query : 1 - 1,383 (1,383/1,383)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 9, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000135911 (
ENST00000343281
)
(Conserved hypothetical protein.)
genome : 32,977,816 - 33,002,151 (24,336)
query : 1 - 488 (488/488)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, nucl 3, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000069745
(
AF113009
)
(NEDD4-binding protein 2-like 1 isoform 2.)
genome : 32,980,057 - 33,002,143 (22,087)
query : 1 - 1,389 (1,389/1,423)
3 exons
identity = 0.997
3'(1.000;0.997;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, cyto_mito 12.8333, cyto 5,
cyto_nucl 4.33333, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000576680 (
ENST00000472298
)
(Conserved hypothetical protein.)
genome : 32,980,590 - 33,002,143 (21,554)
query : 1 - 1,423 (1,423/1,423)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, cyto_mito 12.8333, cyto 5,
cyto_nucl 4.33333, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000262910
(
BC068049
)
(NEDD4-binding protein 2-like 1 isoform 2.)
genome : 32,980,623 - 33,002,311 (21,689)
query : 1 - 1,558 (1,558/1,576)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 12.5, cyto 10.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0131003
HIT000474518 (
ENST00000390991
)
(Non-protein coding transcript.)
genome : 32,994,527 - 32,994,653 (127)
query : 1 - 127 (127/127)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0131003)
HIX0011222
HIT000087682
(
BC011650
)
(Conserved hypothetical protein.)
genome : 32,999,060 - 33,002,299 (3,240)
query : 1 - 2,564 (2,564/2,650)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 7, cyto 6, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000569217 (
ENST00000464470
)
(Conserved hypothetical protein.)
genome : 32,999,059 - 33,002,151 (3,093)
query : 1 - 1,145 (1,145/1,145)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 7, cyto 6, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000566381 (
ENST00000461502
)
(Hypothetical short protein.)
genome : 32,999,495 - 33,007,091 (7,597)
query : 1 - 764 (764/764)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 9, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000220161
(
U50528
)
(Hypothetical short protein.)
genome : 33,000,524 - 33,001,469 (946)
query : 2 - 947 (946/947)
1 exon
identity = 0.954
3'(0.954)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 8.5, cyto_nucl 7, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000220162
(
U50529
)
Representative transcript
(NEDD4-binding protein 2-like 2 isoform 1.)
genome : 33,006,554 - 33,054,775 (48,222)
query : 1 - 2,809 (2,809/2,812)
8 exons
identity = 0.997
3'(0.991;0.978;1.000;1.000;1.000;1.000;0.958;
0.980)5'
coverage = 0.999
InterPro :
IPR026568 : NEDD4-binding protein 2-like 2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12.8333, mito_nucl 11.1667,
cyto 9, mito 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000361400 (
ENST00000380121
)
(NEDD4-binding protein 2-like 2 family protein.)
genome : 33,006,554 - 33,054,775 (48,222)
query : 1 - 2,807 (2,807/2,807)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12.8333, mito_nucl 11.1667,
cyto 9, mito 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000018381
(
AK093514
)
(NEDD4-binding protein 2-like 2 isoform 1.)
genome : 33,006,924 - 33,064,277 (57,354)
query : 1 - 2,315 (2,315/2,315)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;0.999;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026568 : NEDD4-binding protein 2-like 2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 16.1667, cyto 8, cyto_golg 6.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000603594 (
ENST00000503296
)
(Conserved hypothetical protein.)
genome : 33,006,924 - 33,064,277 (57,354)
query : 1 - 2,315 (2,315/2,315)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 16.1667, cyto 8, cyto_golg 6.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000429146
(
AK310280
)
(NEDD4-binding protein 2-like 2 isoform 1.)
genome : 33,006,929 - 33,054,775 (47,847)
query : 20 - 2,241 (2,222/2,241)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;0.999;1.000;1.000)5'
coverage = 0.992
InterPro :
IPR026568 : NEDD4-binding protein 2-like 2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 13.5, cyto 4.5, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0011222
HIT000250096
(
AL049802
)
(NEDD4-binding protein 2-like 2 isoform 1.)
genome : 33,006,930 - 33,054,775 (47,846)
query : 1 - 2,431 (2,431/2,431)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR026568 : NEDD4-binding protein 2-like 2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12.8333, mito_nucl 11.1667,
cyto 9, mito 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011222)
HIX0220846
HIT000535612 (
ENST00000437678
)
(Conserved hypothetical protein.)
genome : 33,051,411 - 33,052,978 (1,568)
query : 1 - 1,568 (1,568/1,568)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 9, mito 7, extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220846)
HIX0037319
HIT000250086
(
AL049782
)
Representative transcript
(Mitochondrial inner membrane organizing system protein 1 isoform c.)
genome : 33,066,436 - 33,072,629 (6,194)
query : 1 - 3,515 (3,515/3,515)
3 exons
identity = 0.999
3'(0.999;0.998;1.000)5'
coverage = 1.000
InterPro :
IPR007512 : Protein of unknown function DUF543
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 3.5, cyto_nucl 3, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037319)
HIX0037319
HIT000727326 (
NR_051980
)
(Mitochondrial inner membrane organizing system protein 1 isoform c.)
genome : 33,070,355 - 33,072,629 (2,275)
query : 1 - 2,275 (2,275/2,287)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 3.5, cyto_nucl 3, mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037319)
HIX0037319
HIT000220163
(
U50530
)
(Mitochondrial inner membrane organizing system protein 1 isoform c.)
genome : 33,070,511 - 33,071,929 (1,419)
query : 1 - 1,423 (1,423/1,426)
1 exon
identity = 0.989
3'(0.989)5'
coverage = 0.998
InterPro :
IPR007512 : Protein of unknown function DUF543
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 3.5, cyto_nucl 3, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037319)
HIX0037625
HIT000220164
(
U50531
)
Representative transcript
(Conserved hypothetical protein.)
genome : 33,078,644 - 33,083,532 (4,889)
query : 1 - 4,891 (4,891/4,905)
1 exon
identity = 0.990
3'(0.990)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 15, extr 12, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037625)
HIX0172321
HIT000563103 (
NR_026928
)
(Conserved hypothetical protein.)
genome : 33,078,643 - 33,083,532 (4,890)
query : 1 - 4,890 (4,890/4,890)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 17.6667, cyto_plas 12.6667, nucl 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172321)
HIX0022991
HIT000098524
(
BC047329
)
Representative transcript
(Conserved hypothetical protein.)
genome : 33,084,429 - 33,085,024 (596)
query : 1 - 596 (596/610)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 12.5, cyto_nucl 10.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022991)
HIX0022991
HIT000019822
(
AK094967
)
(Conserved hypothetical protein.)
genome : 33,084,655 - 33,087,621 (2,967)
query : 1 - 2,965 (2,965/2,965)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, nucl 3, cyto_mito 3, cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022991)
HIX0220759
HIT000205169 (
NM_014887
)
(NEDD4-binding protein 2-like 2; Phosphonoformate immuno-associated protein 5;)
genome : 33,091,030 - 33,112,932 (21,903)
query : 1 - 2,839 (2,839/2,860)
6 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 8.5, cyto_mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220759)
HIX0220759
HIT000110100 (
ENST00000267068
)
(NEDD4-binding protein 2-like 2; Phosphonoformate immuno-associated protein 5;)
genome : 33,091,031 - 33,112,919 (21,889)
query : 1 - 2,825 (2,825/2,825)
6 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 8.5, cyto_mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220759)
HIX0220759
HIT000250087
(
AL049783
)
Representative transcript
(NEDD4-binding protein 2-like 2; Phosphonoformate immuno-associated protein 5;)
genome : 33,091,031 - 33,112,919 (21,889)
query : 1 - 2,825 (2,825/2,825)
6 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026568 : NEDD4-binding protein 2-like 2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 8.5, cyto_mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220759)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB170343
Gallus
sp. (Chicken) : AJ721041
Mus
sp. (Mouse) : BC037393
Rattus
sp. (Rat) : BC081998
Pongo
sp. (Orangutan) : CR857283
Monodelphis
sp. (Opossum) : ENSMODT00000012133
Equus
sp. (Horse) : XM_001495530
Pan
sp. (Chimpanzee) : XM_509621
Canis
sp. (Dog) : XM_534508
Danio
sp. (Zebrafish) : XM_688657
HIX0220759
HIT000604079 (
ENST00000503814
)
(NEDD4-binding protein 2-like 2 isoform 2.)
genome : 33,091,031 - 33,099,716 (8,686)
query : 1 - 5,317 (5,317/5,317)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, extr 8, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220759)
HIX0220759
HIT000042957
(
AK123084
)
(NEDD4-binding protein 2-like 2 isoform 2.)
genome : 33,091,031 - 33,097,093 (6,063)
query : 1 - 2,692 (2,692/2,692)
2 exons
identity = 0.999
3'(1.000;0.998)5'
coverage = 1.000
InterPro :
IPR026568 : NEDD4-binding protein 2-like 2
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 15.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220759)
HIX0220759
HIT000610876 (
ENST00000511143
)
(NEDD4-binding protein 2-like 2 isoform 2.)
genome : 33,091,625 - 33,112,929 (21,305)
query : 1 - 816 (816/816)
3 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, mito 9, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220759)
HIX0220759
HIT000035028
(
BC010643
)
(NEDD4-binding protein 2-like 2; Phosphonoformate immuno-associated protein 5;)
genome : 33,091,758 - 33,112,915 (21,158)
query : 1 - 2,094 (2,094/2,113)
6 exons
identity = 1.000
3'(0.997;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026568 : NEDD4-binding protein 2-like 2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 8.5, cyto_mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220759)
HIX0220759
HIT000027493
(
AL832581
)
(NEDD4-binding protein 2-like 2 isoform 2.)
genome : 33,091,751 - 33,099,716 (7,966)
query : 384 - 4,980 (4,597/4,990)
2 exons
identity = 0.992
3'(0.995;0.991)5'
coverage = 0.921
InterPro :
IPR026568 : NEDD4-binding protein 2-like 2
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 15.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220759)
HIX0220759
HIT000220165
(
U50532
)
(NEDD4-binding protein 2-like 2; Phosphonoformate immuno-associated protein 5;)
genome : 33,091,758 - 33,112,918 (21,161)
query : 5 - 2,101 (2,097/2,115)
6 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR026568 : NEDD4-binding protein 2-like 2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 8.5, cyto_mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220759)
HIX0220759
HIT000431790
(
AK312924
)
(NEDD4-binding protein 2-like 2 isoform 2.)
genome : 33,091,939 - 33,112,929 (20,991)
query : 1 - 1,926 (1,926/1,926)
6 exons
identity = 0.999
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026568 : NEDD4-binding protein 2-like 2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14.8333, cyto 10,
cyto_mito 5.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220759)
HIX0220759
HIT000100092
(
BT007172
)
(NEDD4-binding protein 2-like 2; Phosphonoformate immuno-associated protein 5;)
genome : 33,091,940 - 33,111,164 (19,225)
query : 1 - 1,751 (1,751/1,752)
5 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR026568 : NEDD4-binding protein 2-like 2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 8.5, cyto_mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220759)
HIX0220759
HIT000243723
(
AF530063
)
(NEDD4-binding protein 2-like 2; Phosphonoformate immuno-associated protein 5;)
genome : 33,091,939 - 33,111,164 (19,226)
query : 1 - 1,752 (1,752/1,752)
5 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026568 : NEDD4-binding protein 2-like 2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 8.5, cyto_mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220759)
HIX0220759
HIT000579960 (
ENST00000475731
)
(NEDD4-binding protein 2-like 2 isoform 2.)
genome : 33,092,012 - 33,110,006 (17,995)
query : 1 - 444 (444/444)
4 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 10.5, mito 10, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220759)
HIX0220759
HIT000220169
(
U50536
)
(CAMP-responsive element modulator isoform 26.)
genome : 33,099,601 - 33,100,932 (1,332)
query : 40 - 1,372 (1,333/1,372)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 0.972
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 13.5, extr_plas 7.5, E.R._mito 7.5,
mito_pero 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220759)
HIX0011219
HIT000361529 (
ENST00000380250
)
(Protein furry homolog.)
genome : 32,605,437 - 32,870,794 (265,358)
query : 1 - 10,735 (10,735/10,735)
61 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.971;0.977;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011219)
HIX0011219
HIT000208981 (
NM_023037
)
(Protein furry homolog.)
genome : 32,605,437 - 32,870,776 (265,340)
query : 1 - 10,717 (10,717/10,718)
61 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.971;0.977;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011219)
HIX0011219
HIT000250088
(
AL049784
)
(Cell morphogenesis central region domain containing protein.)
genome : 32,605,437 - 32,870,751 (265,315)
query : 1 - 10,688 (10,688/10,709)
61 exons
identity = 0.999
5'(1.000;1.000;0.981;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.971;0.971;0.996;1.000;0.994;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR025481 : Cell morphogenesis protein C-terminal
IPR029473 : Cell morphogenesis central region
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, mito 12, cyto 6, E.R._mito 6, mito_pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011219)
HIX0011219
HIT000220167
(
U50534
)
Representative transcript
(Protein furry homolog.)
genome : 32,605,437 - 32,870,752 (265,316)
query : 1 - 10,701 (10,701/10,716)
61 exons
identity = 0.996
5'(0.996;1.000;0.981;1.000;1.000;1.000;1.000;
1.000;1.000;0.990;0.990;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;0.973;1.000;0.996;
1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;0.942;0.948;0.988;0.993;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.993;1.000;1.000;
0.987;0.978;0.990;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR025481 : Cell morphogenesis protein C-terminal
IPR025614 : Cell morphogenesis protein N-terminal
IPR029473 : Cell morphogenesis central region
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, E.R. 8, nucl 7, pero 4.5, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011219)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB172084
Gallus
sp. (Chicken) : CR405836
Oryzias
sp. (Medaka) : ENSORLT00000004444
Oryzias
sp. (Medaka) : ENSORLT00000004897
Pongo
sp. (Orangutan) : ENSPPYT00000006227
Rattus
sp. (Rat) : ENSRNOT00000001192
Tetraodon
sp. (Tetraodon) : GSTENT00018854001
Tetraodon
sp. (Tetraodon) : GSTENT00030168001
Takifugu
sp. (Fugu) : SINFRUT00000152066
Danio
sp. (Zebrafish) : XM_001332213
Monodelphis
sp. (Opossum) : XM_001367491
Equus
sp. (Horse) : XM_001493889
Canis
sp. (Dog) : XM_534510
Bos
sp. (Cow) : XM_584268
Danio
sp. (Zebrafish) : XM_690110
Pan
sp. (Chimpanzee) : XR_023403
HIX0011219
HIT000016289
(
AK091422
)
(Protein furry homolog.)
genome : 32,818,174 - 32,870,750 (52,577)
query : 17 - 3,557 (3,541/3,557)
15 exons
identity = 0.995
5'(0.993;1.000;1.000;1.000;0.978;0.990;1.000;
1.000;1.000;1.000;1.000;0.939;0.965;1.000;
0.999)3'
coverage = 0.996
InterPro :
IPR025481 : Cell morphogenesis protein C-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 14.5, cyto 11, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011219)
HIX0011219
HIT000492645
(
AK298021
)
(Protein furry homolog.)
genome : 32,838,805 - 32,869,779 (30,975)
query : 1 - 1,517 (1,517/1,517)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.988;1.000;
0.995;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011219)
HIX0011219
HIT000641904 (
ENST00000542859
)
(Protein furry homolog.)
genome : 32,838,805 - 32,869,779 (30,975)
query : 1 - 1,517 (1,517/1,517)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011219)
HIX0011219
HIT000220505
(
U57961
)
(Protein furry homolog.)
genome : 32,848,998 - 32,870,771 (21,774)
query : 13 - 2,083 (2,071/2,098)
6 exons
identity = 0.987
5'(1.000;0.990;0.939;0.965;1.000;0.989)3'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 11.5, extr 5, cyto 4, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011219)
HIX0220897
HIT000044940
(
AK125067
)
(NEDD4-binding protein 2-like 2 isoform 1.)
genome : 33,006,968 - 33,096,412 (89,445)
query : 1 - 3,062 (3,062/3,273)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.996)5'
coverage = 0.936
InterPro :
IPR026568 : NEDD4-binding protein 2-like 2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 7, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220897)
HIX0220897
HIT000311343 (
ENST00000357505
)
(NEDD4-binding protein 2-like 2 family protein.)
genome : 33,006,924 - 33,112,823 (105,900)
query : 14 - 2,526 (2,513/2,526)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.995
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 12, plas 9, pero 6, extr_plas 6, E.R._mito 6,
E.R._golg 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220897)
HIX0220897
HIT000493170
(
AK298546
)
Representative transcript
(NEDD4-binding protein 2-like 2 isoform 1.)
genome : 33,006,924 - 33,112,823 (105,900)
query : 14 - 2,526 (2,513/2,526)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.995
InterPro :
IPR026568 : NEDD4-binding protein 2-like 2
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 12, plas 9, pero 6, extr_plas 6, E.R._mito 6,
E.R._golg 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220897)
HIX0220897
HIT000604358 (
ENST00000504114
)
(NEDD4-binding protein 2-like 2 family protein.)
genome : 33,006,924 - 33,112,823 (105,900)
query : 1 - 2,513 (2,513/2,513)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 12, plas 9, pero 6, extr_plas 6, E.R._mito 6,
E.R._golg 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220897)
HIX0220897
HIT000211137 (
NM_033111
)
(NEDD4-binding protein 2-like 2 family protein.)
genome : 33,006,930 - 33,111,166 (104,237)
query : 21 - 2,482 (2,462/2,482)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.992
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 14, extr 6, mito_pero 3.83333, mito 3.5,
extr_plas 3.5, cyto_pero 3.33333, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220897)
HIX0220897
HIT000482471 (
ENST00000399396
)
(NEDD4-binding protein 2-like 2 family protein.)
genome : 33,006,930 - 33,111,166 (104,237)
query : 21 - 2,482 (2,462/2,482)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.992
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 14, extr 6, mito_pero 3.83333, mito 3.5,
extr_plas 3.5, cyto_pero 3.33333, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220897)
HIX0220897
HIT000608963 (
ENST00000509076
)
(Conserved hypothetical protein.)
genome : 33,006,968 - 33,096,412 (89,445)
query : 1 - 3,060 (3,060/3,060)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 19.5, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220897)
HIX0220897
HIT000390592
(
BC131631
)
(NEDD4-binding protein 2-like 2 family protein.)
genome : 33,007,028 - 33,101,652 (94,625)
query : 3 - 795 (793/802)
8 exons
identity = 0.990
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.989
InterPro :
IPR026568 : NEDD4-binding protein 2-like 2
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220897)
HIX0220897
HIT000544891 (
ENST00000446957
)
(NEDD4-binding protein 2-like 2 family protein.)
genome : 33,007,028 - 33,111,164 (104,137)
query : 1 - 2,071 (2,071/2,071)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15.3333, cyto 8,
cyto_mito 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220897)
HIX0220897
HIT000605363 (
ENST00000505213
)
(NEDD4-binding protein 2-like 2 family protein.)
genome : 33,017,834 - 33,112,970 (95,137)
query : 1 - 2,343 (2,343/2,343)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 6.5, cyto_mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220897)
HIX0220897
HIT000577368 (
ENST00000473025
)
(Conserved hypothetical protein.)
genome : 33,018,103 - 33,092,057 (73,955)
query : 1 - 273 (273/273)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220897)
HIX0192596
pHIT000023070 ( pHIT000023070 )
Representative transcript
(Conserved hypothetical protein.)
genome : 31,685,851 - 31,686,359 (509)
query : 1 - 246 (246/246)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192596)
CAGE tag :
H04BA80M0111,H04BA84D0308,H05BA62I0508
H05BA70E1503,H05BC70F0103
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK087389
Bos
sp. (Cow) : ENSBTAT00000047499
Canis
sp. (Dog) : ENSCAFT00000010593
Equus
sp. (Horse) : ENSECAT00000017768
Rattus
sp. (Rat) : XM_001067264
Monodelphis
sp. (Opossum) : XM_001376918
HIX0211133
eHIT000003663 ( ESTsASS_13_24 )
Representative transcript
(Non-protein coding transcript.)
genome : 31,738,034 - 31,742,711 (4,678)
query : 1 - 444 (444/444)
4 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211133)
ESTs used for assembly :
DB519876
AL353680.8
31500001-31604988 F +
NCBI
AL158065.7
31604989-31673189 F +
NCBI
AL137142.20
31673190-31786939 F +
NCBI
AL138965.10
31786940-31924998 F +
NCBI
AL157695.14
31924999-31990150 F +
NCBI
AL161616.12
31990151-32069338 F +
NCBI
AL136178.33
32069339-32238779 F +
NCBI
AL159161.11
32238780-32329403 F +
NCBI
AL138708.17
32329404-32445970 F +
NCBI
AC002525.1
32445971-32535432 F +
NCBI
AL137143.8
32535433-32690583 F +
NCBI
AL138692.26
32690584-32806049 F +
NCBI
AL445212.9
32806050-32972606 F +
NCBI
AL137247.14
32972607-33052012 F +
NCBI
AL353665.13
33052013-33100000 F +
NCBI