bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0011294
HIT000105241 (
ENST00000242848
)
(Zinc finger CCCH domain-containing protein 13;)
genome : 46,528,600 - 46,626,881 (98,282)
query : 1 - 8,018 (8,018/8,018)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011294)
HIX0011294
HIT000081959
(
AK074924
)
(Zinc finger CCCH domain-containing protein 13.)
genome : 46,528,602 - 46,543,805 (15,204)
query : 1 - 4,793 (4,793/4,793)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;0.996;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 15.1667, cyto 10,
cyto_golg 8.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011294)
HIX0011294
HIT000360201 (
ENST00000378921
)
(Zinc finger CCCH domain-containing protein 13;)
genome : 46,528,602 - 46,543,805 (15,204)
query : 1 - 4,794 (4,794/4,794)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 15.1667, cyto 11,
cyto_golg 8.66667, mito_nucl 8.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011294)
HIX0011294
HIT000000570
(
AB020660
)
(Zinc finger CCCH domain-containing protein 13;)
genome : 46,529,805 - 46,549,782 (19,978)
query : 1 - 4,363 (4,363/4,363)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.998;1.000;1.000;
0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011294)
HIX0011294
HIT000004289
(
AK001815
)
(Zinc finger CCCH domain-containing protein 13;)
genome : 46,529,822 - 46,541,717 (11,896)
query : 1 - 2,208 (2,208/2,208)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;0.987)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011294)
HIX0011294
HIT000025341
(
AL136745
)
(Zinc finger CCCH domain-containing protein 13.)
genome : 46,536,311 - 46,577,326 (41,016)
query : 1 - 5,450 (5,450/5,469)
10 exons
identity = 0.999
3'(0.999;1.000;0.998;1.000;1.000;1.000;1.000;
1.000;0.997;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 16.3333, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011294)
HIX0011294
HIT000085749
(
AY283618
)
Representative transcript
(Zinc finger CCCH domain-containing protein 13;)
genome : 46,536,314 - 46,626,894 (90,581)
query : 1 - 6,409 (6,409/6,409)
17 exons
identity = 1.000
3'(1.000;1.000;0.998;1.000;1.000;1.000;1.000;
1.000;0.997;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000571 : Zinc finger, CCCH-type
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011294)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK078225
Macaca
sp. (Macaque) : AY680517
Oryzias
sp. (Medaka) : ENSORLT00000006557
Pan
sp. (Chimpanzee) : ENSPTRT00000010757
Rattus
sp. (Rat) : XM_001072035
Monodelphis
sp. (Opossum) : XM_001370152
Equus
sp. (Horse) : XM_001491031
Gallus
sp. (Chicken) : XM_417045
Canis
sp. (Dog) : XM_542572
HIX0011294
HIT000112162 (
ENST00000282007
)
(Zinc finger CCCH domain-containing protein 13.)
genome : 46,536,314 - 46,626,894 (90,581)
query : 1 - 6,409 (6,409/6,409)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011294)
HIX0011294
HIT000205286 (
NM_015070
)
(Zinc finger CCCH domain-containing protein 13.)
genome : 46,536,314 - 46,626,894 (90,581)
query : 1 - 6,409 (6,409/6,409)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011294)
HIX0011294
HIT000013036
(
AK056422
)
(Zinc finger CCCH domain-containing protein 13.)
genome : 46,543,609 - 46,626,881 (83,273)
query : 3 - 3,418 (3,416/3,418)
14 exons
identity = 0.998
3'(1.000;0.990;0.995;1.000;0.998;1.000;1.000;
1.000;0.986;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000571 : Zinc finger, CCCH-type
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011294)
HIX0011294
HIT000026745
(
AL831833
)
(Zinc finger CCCH domain-containing protein 13.)
genome : 46,543,781 - 46,585,614 (41,834)
query : 1 - 2,375 (2,375/2,391)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.997;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011294)
HIX0011294
HIT000017855
(
AK092988
)
(Zinc finger CCCH domain-containing protein 13.)
genome : 46,543,782 - 46,616,349 (72,568)
query : 1 - 2,609 (2,609/2,609)
11 exons
identity = 0.999
3'(1.000;1.000;0.998;1.000;1.000;0.997;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011294)
HIX0011294
HIT000092652
(
BC032425
)
(Zinc finger CCCH domain-containing protein 13.)
genome : 46,549,733 - 46,577,447 (27,715)
query : 12 - 1,394 (1,383/1,408)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011294)
HIX0011294
HIT000259163
(
BC050658
)
(Zinc finger CCCH domain-containing protein 13.)
genome : 46,549,735 - 46,616,379 (66,645)
query : 1 - 1,893 (1,893/1,907)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;0.997;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 16.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011294)
HIX0011294
HIT000260576
(
BC062685
)
(Zinc finger CCCH domain-containing protein 13.)
genome : 46,549,787 - 46,577,353 (27,567)
query : 4 - 1,238 (1,235/1,267)
5 exons
identity = 0.996
3'(0.995;0.995;0.998;0.994;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011294)
HIX0011294
HIT000338952
(
BC107864
)
(Zinc finger CCCH domain-containing protein 13.)
genome : 46,549,909 - 46,577,367 (27,459)
query : 4 - 1,130 (1,127/1,159)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;0.997;1.000)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011294)
HIX0011294
HIT000574789 (
ENST00000470308
)
(Zinc finger CCCH domain-containing protein 13.)
genome : 46,575,298 - 46,585,690 (10,393)
query : 1 - 795 (795/795)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011294)
HIX0011294
HIT000089846
(
BC019000
)
(Zinc finger CCCH domain-containing protein 13.)
genome : 46,577,386 - 46,626,846 (49,461)
query : 1 - 1,146 (1,146/1,163)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000571 : Zinc finger, CCCH-type
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011294)
HIX0011294
HIT000569337 (
ENST00000464597
)
(Zinc finger CCCH domain-containing protein 13.)
genome : 46,584,285 - 46,585,690 (1,406)
query : 1 - 497 (497/497)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011294)
HIX0011294
HIT000526855 (
ENST00000428921
)
(Zinc finger CCCH domain-containing protein 13.)
genome : 46,616,292 - 46,626,820 (10,529)
query : 1 - 695 (695/695)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, mito 3, extr 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011294)
HIX0011295
HIT000019974
(
AK095119
)
(Conserved hypothetical protein.)
genome : 46,626,983 - 46,675,482 (48,500)
query : 1 - 3,217 (3,217/3,217)
3 exons
identity = 0.997
5'(1.000;0.993;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 6.5, mito 6, cyto_nucl 5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011295)
HIX0011295
HIT000726550 (
NR_046226
)
(Conserved hypothetical protein.)
genome : 46,626,983 - 46,675,482 (48,500)
query : 1 - 3,508 (3,508/3,508)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 7, cyto 6, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011295)
HIX0011295
HIT000726551 (
NR_046227
)
(Conserved hypothetical protein.)
genome : 46,626,983 - 46,675,482 (48,500)
query : 1 - 3,218 (3,218/3,218)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 7, cyto 6, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011295)
HIX0011295
HIT000044801
(
AK124928
)
Representative transcript
(Conserved hypothetical protein.)
genome : 46,626,983 - 46,674,159 (47,177)
query : 1 - 2,186 (2,186/2,186)
4 exons
identity = 0.995
5'(1.000;0.993;1.000;0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 8.5, extr_plas 8.5, cyto_nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011295)
HIX0201995
HIT000196348
(
M75106
)
(Carboxypeptidase B2; EC=3.4.17.20; Carboxypeptidase U; CPU; Plasma carboxypeptidase B; pCPB; Thrombin-activable fibrinolysis inhibitor; TAFI; Precursor;)
genome : 46,627,330 - 46,679,161 (51,832)
query : 3 - 1,710 (1,708/1,728)
11 exons
identity = 0.993
3'(0.988;0.989;1.000;1.000;0.982;0.990;1.000;
0.991;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 3.4.17.20
InterPro :
IPR000834 : Peptidase M14, carboxypeptidase A
IPR003146 : Proteinase inhibitor, carboxypeptidase propeptide
IPR009020 : Proteinase inhibitor, propeptide
GO :
0004180 : Molecular Function : carboxypeptidase activity
0004181 : Molecular Function : metallocarboxypeptidase activity
0006508 : Biological Process : proteolysis
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 10, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201995)
HIX0201995
HIT000102573 (
ENST00000181383
)
(Carboxypeptidase B2; EC=3.4.17.20; Carboxypeptidase U; CPU; Plasma carboxypeptidase B; pCPB; Thrombin-activable fibrinolysis inhibitor; TAFI; Precursor;)
genome : 46,627,321 - 46,679,161 (51,841)
query : 1 - 1,717 (1,717/1,717)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.17.20
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, E.R. 11, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201995)
HIX0201995
HIT000198803 (
NM_001872
)
(Carboxypeptidase B2; EC=3.4.17.20; Carboxypeptidase U; CPU; Plasma carboxypeptidase B; pCPB; Thrombin-activable fibrinolysis inhibitor; TAFI; Precursor;)
genome : 46,627,322 - 46,679,211 (51,890)
query : 1 - 1,766 (1,766/1,766)
11 exons
identity = 0.999
3'(1.000;0.989;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.17.20
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 10, lyso 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201995)
HIX0201995
HIT000537263 (
ENST00000439329
)
(Carboxypeptidase B2; EC=3.4.17.20; Carboxypeptidase U; CPU; Plasma carboxypeptidase B; pCPB; Thrombin-activable fibrinolysis inhibitor; TAFI; Precursor;)
genome : 46,627,322 - 46,679,211 (51,890)
query : 1 - 1,603 (1,603/1,603)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.17.20
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, E.R. 5, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201995)
HIX0201995
HIT000033017
(
BC007057
)
Representative transcript
(Carboxypeptidase B2; EC=3.4.17.20; Carboxypeptidase U; CPU; Plasma carboxypeptidase B; pCPB; Thrombin-activable fibrinolysis inhibitor; TAFI; Precursor;)
genome : 46,627,361 - 46,679,168 (51,808)
query : 1 - 1,684 (1,684/1,715)
11 exons
identity = 0.996
3'(0.995;0.989;1.000;1.000;0.991;1.000;1.000;
0.991;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 3.4.17.20
InterPro :
IPR000834 : Peptidase M14, carboxypeptidase A
IPR003146 : Proteinase inhibitor, carboxypeptidase propeptide
IPR009020 : Proteinase inhibitor, propeptide
GO :
0004180 : Molecular Function : carboxypeptidase activity
0004181 : Molecular Function : metallocarboxypeptidase activity
0006508 : Biological Process : proteolysis
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 10, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201995)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF164524
Danio
sp. (Zebrafish) : BC095834
Rattus
sp. (Rat) : BC107447
Bos
sp. (Cow) : BC112649
Equus
sp. (Horse) : ENSECAT00000018403
Gallus
sp. (Chicken) : ENSGALT00000027441
Oryzias
sp. (Medaka) : ENSORLT00000006589
Pongo
sp. (Orangutan) : ENSPPYT00000006326
Takifugu
sp. (Fugu) : SINFRUT00000145317
Macaca
sp. (Macaque) : XM_001097608
Pan
sp. (Chimpanzee) : XM_001158498
Monodelphis
sp. (Opossum) : XM_001370214
Canis
sp. (Dog) : XM_846061
HIX0201995
HIT000058287
(
AB011969
)
(Carboxypeptidase B2; EC=3.4.17.20; Carboxypeptidase U; CPU; Plasma carboxypeptidase B; pCPB; Thrombin-activable fibrinolysis inhibitor; TAFI; Precursor;)
genome : 46,627,331 - 46,679,161 (51,831)
query : 3 - 1,546 (1,544/1,546)
11 exons
identity = 0.993
3'(0.984;0.982;1.000;1.000;1.000;0.990;1.000;
1.000;1.000;1.000;0.989)5'
coverage = 0.999
EC number :
EC 3.4.17.20
InterPro :
IPR000834 : Peptidase M14, carboxypeptidase A
IPR003146 : Proteinase inhibitor, carboxypeptidase propeptide
IPR009020 : Proteinase inhibitor, propeptide
GO :
0004180 : Molecular Function : carboxypeptidase activity
0004181 : Molecular Function : metallocarboxypeptidase activity
0006508 : Biological Process : proteolysis
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, E.R. 6, lyso 3, E.R._mito 3, E.R._golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201995)
HIX0201995
HIT000423626
(
AK290829
)
(Carboxypeptidase B2; EC=3.4.17.20; Carboxypeptidase U; CPU; Plasma carboxypeptidase B; pCPB; Thrombin-activable fibrinolysis inhibitor; TAFI; Precursor;)
genome : 46,627,590 - 46,679,159 (51,570)
query : 1 - 1,446 (1,446/1,446)
11 exons
identity = 0.996
3'(0.997;0.989;1.000;1.000;0.982;0.990;1.000;
0.991;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.17.20
InterPro :
IPR000834 : Peptidase M14, carboxypeptidase A
IPR003146 : Proteinase inhibitor, carboxypeptidase propeptide
IPR009020 : Proteinase inhibitor, propeptide
GO :
0004180 : Molecular Function : carboxypeptidase activity
0004181 : Molecular Function : metallocarboxypeptidase activity
0006508 : Biological Process : proteolysis
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 10, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201995)
HIX0201995
HIT000099856
(
BT006936
)
(Carboxypeptidase B2; EC=3.4.17.20; Carboxypeptidase U; CPU; Plasma carboxypeptidase B; pCPB; Thrombin-activable fibrinolysis inhibitor; TAFI; Precursor;)
genome : 46,627,750 - 46,679,144 (51,395)
query : 1 - 1,271 (1,271/1,272)
11 exons
identity = 0.998
3'(1.000;0.989;1.000;1.000;0.991;1.000;1.000;
0.991;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 3.4.17.20
InterPro :
IPR000834 : Peptidase M14, carboxypeptidase A
IPR003146 : Proteinase inhibitor, carboxypeptidase propeptide
IPR009020 : Proteinase inhibitor, propeptide
GO :
0004180 : Molecular Function : carboxypeptidase activity
0004181 : Molecular Function : metallocarboxypeptidase activity
0006508 : Biological Process : proteolysis
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 10, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201995)
HIX0011295
HIT000512967 (
ENST00000415033
)
(Conserved hypothetical protein.)
genome : 46,669,028 - 46,687,467 (18,440)
query : 1 - 644 (644/644)
3 exons
identity = 0.998
5'(1.000;0.997;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 5.5, nucl 4.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011295)
HIX0011297
HIT000016953
(
AK092086
)
(Conserved hypothetical protein.)
genome : 46,691,999 - 46,694,339 (2,341)
query : 1 - 2,340 (2,340/2,340)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.1667, cyto 11, mito 8, cyto_plas 7.5,
nucl 5, extr 4, E.R._mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011297)
HIX0011297
HIT000021090
(
AK096235
)
Representative transcript
(Conserved hypothetical protein.)
genome : 46,693,992 - 46,696,834 (2,843)
query : 1 - 2,843 (2,843/2,843)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 12.5, cyto_nucl 9.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011297)
HIX0220748
HIT000088533
(
BC015001
)
(Hypothetical short protein.)
genome : 46,700,058 - 46,701,232 (1,175)
query : 2 - 1,176 (1,175/1,198)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 8, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220748)
HIX0220748
HIT000333358
(
AY960627
)
(Calponin homology domain containing protein.)
genome : 46,700,058 - 46,704,993 (4,936)
query : 9 - 1,853 (1,845/1,871)
2 exons
identity = 0.998
3'(0.999;0.978)5'
coverage = 0.996
InterPro :
IPR001715 : Calponin homology domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 4, extr 2, nucl 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220748)
HIX0220748
HIT000022130
(
AK097275
)
Representative transcript
(Plastin-2; L-plastin; LC64P; Lymphocyte cytosolic protein 1; LCP-1;)
genome : 46,700,059 - 46,719,354 (19,296)
query : 1 - 3,076 (3,076/3,076)
6 exons
identity = 0.998
3'(0.998;1.000;0.984;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001589 : Actinin-type actin-binding domain, conserved site
IPR001715 : Calponin homology domain
GO :
0003779 : Molecular Function : actin binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.3333, cyto_pero 12.3333,
nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220748)
HIX0220748
HIT000048896
(
AK129625
)
(Calponin homology domain containing protein.)
genome : 46,700,059 - 46,717,504 (17,446)
query : 1 - 2,261 (2,261/2,261)
5 exons
identity = 0.998
3'(0.998;1.000;0.992;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001589 : Actinin-type actin-binding domain, conserved site
IPR001715 : Calponin homology domain
GO :
0003779 : Molecular Function : actin binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12.5, nucl 6.5, extr 5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220748)
HIX0220748
HIT000022029
(
AK097174
)
(Calponin homology domain containing protein.)
genome : 46,700,059 - 46,702,480 (2,422)
query : 12 - 2,432 (2,421/2,432)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 0.995
InterPro :
IPR001715 : Calponin homology domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, extr 4, cyto 2, extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220748)
HIX0220748
HIT000014758
(
AK058152
)
(Calponin homology domain containing protein.)
genome : 46,700,059 - 46,701,858 (1,800)
query : 19 - 1,568 (1,550/1,568)
2 exons
identity = 0.993
3'(0.991;0.995)5'
coverage = 0.989
InterPro :
IPR001715 : Calponin homology domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 9, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220748)
HIX0220748
HIT000495180
(
AK300556
)
(Plastin-2; L-plastin; LC64P; Lymphocyte cytosolic protein 1; LCP-1;)
genome : 46,700,845 - 46,717,015 (16,171)
query : 3 - 1,554 (1,552/1,554)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001589 : Actinin-type actin-binding domain, conserved site
IPR001715 : Calponin homology domain
GO :
0003779 : Molecular Function : actin binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 17, cyto 8.5, cysk_plas 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220748)
HIX0220748
HIT000533600 (
ENST00000435666
)
(Calponin homology domain containing protein.)
genome : 46,700,845 - 46,717,015 (16,171)
query : 1 - 1,552 (1,552/1,552)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 17, cyto 8.5, cysk_plas 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220748)
HIX0220748
HIT000427875
(
AK309009
)
(Calponin homology domain containing protein.)
genome : 46,701,270 - 46,717,002 (15,733)
query : 1 - 1,114 (1,114/1,114)
5 exons
identity = 0.998
3'(0.998;1.000;0.992;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001589 : Actinin-type actin-binding domain, conserved site
IPR001715 : Calponin homology domain
GO :
0003779 : Molecular Function : actin binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 21, cyto 5.5, extr 4, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220748)
HIX0220753
HIT000573758 (
ENST00000469227
)
(Calponin homology domain containing protein.)
genome : 46,721,041 - 46,727,400 (6,360)
query : 1 - 730 (730/730)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 14, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220753)
HIX0220753
HIT000597927 (
ENST00000494531
)
(Calponin homology domain containing protein.)
genome : 46,722,487 - 46,727,378 (4,892)
query : 1 - 537 (537/537)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 12.5, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220753)
HIX0220753
HIT000514434 (
ENST00000416500
)
(EF-hand domain pair containing protein.)
genome : 46,726,916 - 46,742,654 (15,739)
query : 1 - 819 (819/819)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 18, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220753)
HIX0220753
HIT000195586
(
M34426
)
Representative transcript
(Plastin-2; L-plastin; LC64P; Lymphocyte cytosolic protein 1; LCP-1;)
genome : 46,730,644 - 46,756,358 (25,715)
query : 1 - 557 (557/557)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 18.5, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220753)
HIX0220753
HIT000259346
(
BC053839
)
(Plastin-2; L-plastin; Lymphocyte cytosolic plastin 1;)
genome : 46,731,900 - 46,756,341 (24,442)
query : 1 - 2,018 (2,018/2,040)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 15.5, nucl 11.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220753)
HIX0220753
HIT000018435
(
AK093568
)
(Plastin-2; L-plastin; Lymphocyte cytosolic plastin 1;)
genome : 46,731,901 - 46,756,400 (24,500)
query : 2 - 2,077 (2,076/2,077)
2 exons
identity = 1.000
3'(0.999;1.000)5'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 15.5, nucl 11.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220753)
HIX0220753
HIT000540209 (
ENST00000442275
)
(EF-hand domain pair containing protein.)
genome : 46,732,991 - 46,786,006 (53,016)
query : 1 - 753 (753/753)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 10.5, cyto 10.5, extr 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220753)
HIX0220753
HIT000565130 (
ENST00000460190
)
(Hypothetical protein.)
genome : 46,733,151 - 46,756,339 (23,189)
query : 1 - 765 (765/765)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 10, extr 9, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220753)
HIX0037334
HIT000544109 (
ENST00000446175
)
(Protein FAM206A.)
genome : 46,786,083 - 46,844,757 (58,675)
query : 1 - 2,091 (2,091/2,091)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.974;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 11, cyto 9, cyto_nucl 8.5, nucl 6, plas 2,
E.R. 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037334)
HIX0037334
HIT000092112
(
BC030276
)
Representative transcript
(Leucine-rich repeat containing protein.)
genome : 46,786,083 - 46,841,076 (54,994)
query : 1 - 1,864 (1,864/1,932)
9 exons
identity = 0.998
5'(0.997;1.000;0.997;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito_nucl 9.16667, nucl 9, mito 9, cyto_nucl 8,
plas 5, cyto 5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037334)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : BC097406
Mus
sp. (Mouse) : BC145796
Pongo
sp. (Orangutan) : ENSPPYT00000006328
Equus
sp. (Horse) : XM_001491382
Pan
sp. (Chimpanzee) : XM_509669
Canis
sp. (Dog) : XM_549514
Bos
sp. (Cow) : XM_866657
Macaca
sp. (Macaque) : XR_011896
HIX0037334
HIT000360085 (
ENST00000378805
)
(Leucine-rich repeat containing protein.)
genome : 46,786,083 - 46,841,076 (54,994)
query : 1 - 1,864 (1,864/1,864)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12, cyto 9, cyto_nucl 8.5, nucl 6, E.R. 2,
pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037334)
HIX0037334
HIT000707189 (
ENST00000595396
)
(Leucine-rich repeat containing protein.)
genome : 46,787,170 - 46,851,501 (64,332)
query : 1 - 2,327 (2,327/2,327)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12, nucl 7.5, cyto_nucl 7.5, cyto 6.5, plas 2,
E.R. 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037334)
HIX0211196
HIT000616448 (
ENST00000517045
)
(Hypothetical short protein.)
genome : 46,824,077 - 46,824,348 (272)
query : 1 - 272 (272/272)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211196)
HIX0037334
HIT000609993 (
ENST00000510179
)
(Protein FAM206A.)
genome : 46,844,212 - 46,844,752 (541)
query : 1 - 541 (541/541)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 17, cyto_plas 13.3333, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037334)
HIX0211154
HIT000454447_07
(
DQ587916
)
Representative transcript
(Non-protein coding transcript.)
genome : 46,858,149 - 46,858,178 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211154)
HIX0037628
HIT000221519
(
U79295
)
Representative transcript
(Hypothetical short protein.)
genome : 46,870,580 - 46,871,979 (1,400)
query : 1 - 1,400 (1,400/1,418)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 10.5, cyto_nucl 8.5, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037628)
HIX0037628
HIT000726901 (
NR_047493
)
(Hypothetical short protein.)
genome : 46,870,580 - 46,871,979 (1,400)
query : 1 - 1,400 (1,400/1,418)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 10.5, cyto_nucl 8.5, mito 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037628)
HIX0220864
HIT000679408 (
ENST00000566370
)
(Hypothetical protein.)
genome : 46,870,580 - 46,871,979 (1,400)
query : 1 - 1,400 (1,400/1,400)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 8.5, cyto_nucl 8.16667, mito 6,
cyto 4.5, cyto_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220864)
HIX0011299
HIT000209732 (
NM_025113
)
(Domain of unknown function DUF4206 domain containing protein.)
genome : 46,916,138 - 46,961,635 (45,498)
query : 1 - 3,976 (3,976/3,993)
15 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.981;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0011299
HIT000360061 (
ENST00000378781
)
(Domain of unknown function DUF4206 domain containing protein.)
genome : 46,916,139 - 46,961,635 (45,497)
query : 1 - 3,914 (3,914/3,914)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.981;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 10, nucl 2, mito 2, lyso 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0011299
HIT000360077 (
ENST00000378797
)
(Domain of unknown function DUF4206 domain containing protein.)
genome : 46,916,139 - 46,961,635 (45,497)
query : 1 - 3,821 (3,821/3,821)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.981;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0011299
HIT000527913 (
ENST00000429979
)
(Domain of unknown function DUF4206 domain containing protein.)
genome : 46,916,139 - 46,961,635 (45,497)
query : 1 - 3,975 (3,975/3,975)
15 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.981;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0011299
HIT000041481
(
BC032311
)
(Uncharacterized protein KIAA0226-like;)
genome : 46,917,101 - 46,961,316 (44,216)
query : 1 - 4,040 (4,040/4,124)
13 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;0.996;1.000;
1.000;1.000;0.981;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR025258 : Domain of unknown function DUF4206
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 9.5, mito 7, cyto_nucl 6, extr_plas 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0011299
HIT000052818
(
BC043488
)
(Domain of unknown function DUF4206 domain containing protein.)
genome : 46,917,101 - 46,961,368 (44,268)
query : 1 - 2,359 (2,359/2,422)
15 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.981;1.000;0.996;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR025258 : Domain of unknown function DUF4206
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0011299
HIT000055665
(
BX641126
)
(Domain of unknown function DUF4206 domain containing protein.)
genome : 46,917,101 - 46,946,237 (29,137)
query : 13 - 2,047 (2,035/2,101)
13 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.981;1.000;1.000)5'
coverage = 0.994
InterPro :
IPR025258 : Domain of unknown function DUF4206
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0011299
HIT000258905
(
BC004495
)
(Domain of unknown function DUF4206 domain containing protein.)
genome : 46,917,101 - 46,942,296 (25,196)
query : 9 - 1,710 (1,702/1,728)
11 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.968)5'
coverage = 1.000
InterPro :
IPR025258 : Domain of unknown function DUF4206
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18, cyto 16, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0011299
HIT000090363
(
BC021097
)
(Conserved hypothetical protein.)
genome : 46,917,101 - 46,946,688 (29,588)
query : 1 - 1,363 (1,363/1,380)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 15.5, cyto 8, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0011299
HIT000008489
(
AK025215
)
(Domain of unknown function DUF4206 domain containing protein.)
genome : 46,917,101 - 46,961,384 (44,284)
query : 1 - 2,492 (2,492/2,508)
13 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.981;1.000;0.998;1.000)5'
coverage = 1.000
InterPro :
IPR025258 : Domain of unknown function DUF4206
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0011299
HIT000396796 (
ENST00000389908
)
(Domain of unknown function DUF4206 domain containing protein.)
genome : 46,917,099 - 46,964,177 (47,079)
query : 1 - 2,993 (2,993/2,993)
15 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.981;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0011299
HIT000360067 (
ENST00000378787
)
(Domain of unknown function DUF4206 domain containing protein.)
genome : 46,917,099 - 46,961,621 (44,523)
query : 1 - 2,731 (2,731/2,731)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.981;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0011299
HIT000539218 (
ENST00000441284
)
(Domain of unknown function DUF4206 domain containing protein.)
genome : 46,917,099 - 46,961,370 (44,272)
query : 1 - 2,754 (2,754/2,754)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0011299
HIT000360064 (
ENST00000378784
)
(Domain of unknown function DUF4206 domain containing protein.)
genome : 46,917,099 - 46,961,368 (44,270)
query : 1 - 2,361 (2,361/2,361)
15 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.981;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0011299
HIT000590908 (
ENST00000487195
)
(Domain of unknown function DUF4206 domain containing protein.)
genome : 46,917,099 - 46,925,142 (8,044)
query : 1 - 1,736 (1,736/1,736)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 9.5, mito 7, cyto_nucl 6, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0011299
HIT000045623
(
AK125750
)
(Domain of unknown function DUF4206 domain containing protein.)
genome : 46,917,102 - 46,925,142 (8,041)
query : 1 - 1,733 (1,733/1,733)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR025258 : Domain of unknown function DUF4206
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 9.5, mito 7, cyto_nucl 6, extr_plas 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0011299
HIT000494807
(
AK300183
)
(Domain of unknown function DUF4206 domain containing protein.)
genome : 46,917,202 - 46,961,315 (44,114)
query : 25 - 1,959 (1,935/1,959)
14 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.981;1.000;0.983;1.000)5'
coverage = 0.988
InterPro :
IPR025258 : Domain of unknown function DUF4206
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0011299
HIT000123306 (
ENST00000322896
)
(Domain of unknown function DUF4206 domain containing protein.)
genome : 46,917,202 - 46,961,317 (44,116)
query : 1 - 1,937 (1,937/1,937)
14 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.981;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0011299
HIT000426720
(
AK307854
)
(Domain of unknown function DUF4206 domain containing protein.)
genome : 46,917,225 - 46,961,378 (44,154)
query : 1 - 1,858 (1,858/1,858)
13 exons
identity = 0.997
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.990;0.981;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR025258 : Domain of unknown function DUF4206
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0011299
HIT000425831
(
AK293034
)
(Domain of unknown function DUF4206 domain containing protein.)
genome : 46,917,415 - 46,961,387 (43,973)
query : 1 - 1,948 (1,948/1,948)
14 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.981;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR025258 : Domain of unknown function DUF4206
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0011299
HIT000633970 (
ENST00000534925
)
(Domain of unknown function DUF4206 domain containing protein.)
genome : 46,917,415 - 46,961,387 (43,973)
query : 1 - 1,948 (1,948/1,948)
14 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.981;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0011299
HIT000017940
(
AK093073
)
Representative transcript
(Domain of unknown function DUF4206 domain containing protein.)
genome : 46,917,472 - 46,964,147 (46,676)
query : 1 - 2,590 (2,590/2,590)
15 exons
identity = 0.997
3'(1.000;1.000;0.994;1.000;0.996;0.985;1.000;
1.000;1.000;1.000;0.981;1.000;0.998;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR025258 : Domain of unknown function DUF4206
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0011299
HIT000429130
(
AK310264
)
(Conserved hypothetical protein.)
genome : 46,924,251 - 46,952,842 (28,592)
query : 1 - 2,259 (2,259/2,259)
13 exons
identity = 0.998
3'(1.000;0.990;1.000;1.000;1.000;1.000;1.000;
0.981;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 15.5, cyto 10, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0011299
HIT000515339 (
ENST00000417405
)
(Conserved hypothetical protein.)
genome : 46,942,209 - 46,961,365 (19,157)
query : 1 - 494 (494/494)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 13.5, cyto_nucl 8.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0011299
HIT000537576 (
ENST00000439642
)
(Conserved hypothetical protein.)
genome : 46,946,076 - 46,952,780 (6,705)
query : 1 - 972 (972/972)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, nucl 9.5, cyto_mito 9.5, cyto_nucl 8.16667,
cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0011299
HIT000584923 (
ENST00000480935
)
(Conserved hypothetical protein.)
genome : 46,946,188 - 46,961,367 (15,180)
query : 1 - 257 (257/257)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, mito 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011299)
HIX0220842
HIT000521985 (
ENST00000424051
)
(Protein phosphatase inhibitor 2 (IPP-2) family protein.)
genome : 47,011,529 - 47,012,123 (595)
query : 1 - 595 (595/595)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 7, mito 4, cyto_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220842)
HIX0037540
HIT000514455 (
ENST00000416521
)
(Conserved hypothetical protein.)
genome : 47,029,472 - 47,040,918 (11,447)
query : 1 - 500 (500/500)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 9, mito 6, extr 3, E.R._mito 3,
mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037540)
HIX0037540
HIT000556216 (
ENST00000458282
)
(Hypothetical short protein.)
genome : 47,029,488 - 47,032,373 (2,886)
query : 1 - 558 (558/558)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037540)
HIX0037540
HIT000709855 (
ENST00000598084
)
(Conserved hypothetical protein.)
genome : 47,029,504 - 47,060,641 (31,138)
query : 1 - 647 (647/647)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037540)
HIX0037540
HIT000710935 (
ENST00000599175
)
(Conserved hypothetical protein.)
genome : 47,029,504 - 47,040,821 (11,318)
query : 1 - 560 (560/560)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 24, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037540)
HIX0037540
HIT000705451 (
ENST00000593640
)
(Conserved hypothetical protein.)
genome : 47,029,504 - 47,038,954 (9,451)
query : 1 - 588 (588/588)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 9.5, mito 7, cysk 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037540)
HIX0037540
HIT000098386
(
BC046635
)
Representative transcript
(Keratin-associated protein 21-1;)
genome : 47,032,199 - 47,033,320 (1,122)
query : 4 - 1,125 (1,122/1,208)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 8.5, nucl 8, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037540)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000006400
Pan
sp. (Chimpanzee) : XM_001155777
HIX0037540
HIT000707324 (
ENST00000595532
)
(Keratin-associated protein 21-1;)
genome : 47,032,196 - 47,033,320 (1,125)
query : 1 - 1,125 (1,125/1,125)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 9, nucl 7, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037540)
HIX0037540
HIT000710585_01 (
ENST00000598822
)
(Keratin-associated protein 21-1;)
genome : 47,033,177 - 47,033,323 (147)
query : 1 - 147 (147/147)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 8.5, nucl 8, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037540)
HIX0171822
HIT000483402 (
ENST00000400428
)
(Olfactory receptor family protein.)
genome : 47,034,744 - 47,035,256 (513)
query : 1 - 513 (513/513)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, plas 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171822)
HIX0037540
HIT000705960 (
ENST00000594153
)
(Olfactory receptor 18; Olfactory receptor 145-1; Olfactory receptor TPCR34;)
genome : 47,035,080 - 47,040,911 (5,832)
query : 1 - 552 (552/552)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 13, cyto_nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037540)
HIX0037540
HIT000706232 (
ENST00000594428
)
(Conserved hypothetical protein.)
genome : 47,035,080 - 47,040,141 (5,062)
query : 1 - 390 (390/390)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 9.5, mito 7, cysk 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037540)
HIX0059185
HIT000634940_02 (
ENST00000535895
)
(Cytochrome c oxidase copper chaperone family protein.)
genome : 47,064,997 - 47,065,397 (401)
query : 1 - 401 (401/401)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 10, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059185)
HIX0059185
HIT000360055 (
ENST00000378775
)
(Cytochrome c oxidase copper chaperone family protein.)
genome : 47,065,065 - 47,065,256 (192)
query : 1 - 192 (192/192)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 10, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059185)
HIX0172041
HIT000521584 (
ENST00000423650
)
(Conserved hypothetical protein.)
genome : 47,079,253 - 47,079,571 (319)
query : 1 - 319 (319/319)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172041)
HIX0011300
HIT000653914 (
NM_001164213
)
(Leucine-rich repeat and calponin homology domain-containing protein 1 isoform 3.)
genome : 47,127,296 - 47,327,174 (199,879)
query : 1 - 4,716 (4,716/4,731)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.987;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, plas 9, E.R._mito 7, mito 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011300)
HIX0011300
HIT000317205 (
NM_015116
)
(Leucine-rich repeat and calponin homology domain-containing protein 1; Calponin homology domain-containing protein 1; Neuronal protein 81; NP81;)
genome : 47,127,296 - 47,319,035 (191,740)
query : 1 - 5,475 (5,475/5,490)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.987;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R._mito 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011300)
HIX0011300
HIT000653913 (
NM_001164211
)
(Leucine-rich repeat and calponin homology domain-containing protein 1 isoform 1.)
genome : 47,127,296 - 47,319,035 (191,740)
query : 1 - 5,580 (5,580/5,595)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.987;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011300)
HIX0011300
HIT000118974 (
ENST00000311191
)
(Leucine-rich repeat and calponin homology domain-containing protein 1 isoform 3.)
genome : 47,127,303 - 47,327,175 (199,873)
query : 1 - 4,710 (4,710/4,710)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, plas 9, E.R._mito 7, mito 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011300)
HIX0011300
HIT000250664
(
AY050631
)
(Leucine-rich repeat and calponin homology domain-containing protein 1 isoform 3.)
genome : 47,127,303 - 47,325,696 (198,394)
query : 1 - 3,231 (3,231/3,245)
19 exons
identity = 0.998
5'(0.998;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.987;0.997)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR001715 : Calponin homology domain
IPR003591 : Leucine-rich repeat, typical subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, plas 9, E.R._mito 7, mito 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011300)
HIX0011300
HIT000250665
(
AY050632
)
(Leucine-rich repeat and calponin homology domain-containing protein 1; Calponin homology domain-containing protein 1; Neuronal protein 81; NP81;)
genome : 47,127,303 - 47,317,730 (190,428)
query : 1 - 4,163 (4,163/4,163)
19 exons
identity = 0.999
5'(0.998;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.987;0.999)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR001715 : Calponin homology domain
IPR003591 : Leucine-rich repeat, typical subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R._mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011300)
HIX0011300
HIT000428803
(
AK309937
)
(Leucine-rich repeat and calponin homology domain-containing protein 1 isoform 3.)
genome : 47,127,305 - 47,279,755 (152,451)
query : 1 - 2,070 (2,070/2,070)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR003591 : Leucine-rich repeat, typical subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 13, extr 11, mito 6, E.R._mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011300)
HIX0011300
HIT000541879 (
ENST00000443945
)
(Leucine-rich repeat and calponin homology domain-containing protein 1; Calponin homology domain-containing protein 1; Neuronal protein 81; NP81;)
genome : 47,127,305 - 47,279,755 (152,451)
query : 1 - 2,070 (2,070/2,070)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 13, extr 11, mito 6, E.R._mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011300)
HIX0011300
HIT000425695
(
AK292898
)
(Leucine-rich repeat and calponin homology domain-containing protein 1 isoform 3.)
genome : 47,127,328 - 47,325,047 (197,720)
query : 1 - 2,557 (2,557/2,557)
19 exons
identity = 0.998
5'(1.000;1.000;0.992;0.991;0.993;1.000;1.000;
1.000;1.000;1.000;1.000;0.989;1.000;1.000;
1.000;1.000;1.000;0.987;0.997)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR001715 : Calponin homology domain
IPR003591 : Leucine-rich repeat, typical subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, plas 9, E.R._mito 7, mito 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011300)
HIX0011300
HIT000000733
(
AB023233
)
(Leucine-rich repeat and calponin homology domain-containing protein 1; Calponin homology domain-containing protein 1; Neuronal protein 81; NP81;)
genome : 47,127,335 - 47,317,730 (190,396)
query : 1 - 4,131 (4,131/4,131)
19 exons
identity = 0.999
5'(0.998;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.987;0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R._mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011300)
HIX0011300
HIT000396686 (
ENST00000389798
)
(Leucine-rich repeat and calponin homology domain-containing protein 1; Calponin homology domain-containing protein 1; Neuronal protein 81; NP81;)
genome : 47,127,335 - 47,317,730 (190,396)
query : 1 - 4,131 (4,131/4,131)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R._mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011300)
HIX0011300
HIT000340511
(
BC112937
)
(Leucine-rich repeat and calponin homology domain-containing protein 1 isoform 3.)
genome : 47,127,384 - 47,325,696 (198,313)
query : 1 - 3,150 (3,150/3,222)
19 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.987;1.000)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR001715 : Calponin homology domain
IPR003591 : Leucine-rich repeat, typical subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, plas 9, E.R._mito 7, mito 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011300)
HIX0011300
HIT000387760
(
BC117472
)
Representative transcript
(Leucine-rich repeat and calponin homology domain-containing protein 1 isoform 1.)
genome : 47,127,395 - 47,316,868 (189,474)
query : 1 - 3,315 (3,315/3,315)
20 exons
identity = 0.998
5'(0.998;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.987;0.996)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR001715 : Calponin homology domain
IPR003591 : Leucine-rich repeat, typical subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011300)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK129264
Pongo
sp. (Orangutan) : CR860239
Equus
sp. (Horse) : ENSECAT00000026367
Oryzias
sp. (Medaka) : ENSORLT00000017484
Tetraodon
sp. (Tetraodon) : GSTENT00021778001
Takifugu
sp. (Fugu) : SINFRUT00000163393
Rattus
sp. (Rat) : XM_001071563
Monodelphis
sp. (Opossum) : XM_001378971
Gallus
sp. (Chicken) : XM_417050
Canis
sp. (Dog) : XM_534123
Bos
sp. (Cow) : XM_581598
Danio
sp. (Zebrafish) : XM_684284
Macaca
sp. (Macaque) : XR_011932
Pan
sp. (Chimpanzee) : XR_024025
HIX0011300
HIT000396685 (
ENST00000389797
)
(Leucine-rich repeat and calponin homology domain-containing protein 1 isoform 1.)
genome : 47,127,395 - 47,316,868 (189,474)
query : 1 - 3,314 (3,314/3,314)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011300)
HIX0011300
HIT000502324
(
BC143883
)
(Leucine-rich repeat and calponin homology domain-containing protein 1 isoform 1.)
genome : 47,127,395 - 47,316,868 (189,474)
query : 1 - 3,314 (3,314/3,314)
20 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.993;1.000;0.984;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.987;0.998)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR001715 : Calponin homology domain
IPR003591 : Leucine-rich repeat, typical subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011300)
HIX0011301
HIT000006751
(
AK023477
)
Representative transcript
(Conserved hypothetical protein.)
genome : 47,151,543 - 47,153,768 (2,226)
query : 1 - 2,226 (2,226/2,226)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011301)
HIX0026621
HIT000057271
(
BX648624
)
Representative transcript
(Conserved hypothetical protein.)
genome : 47,155,350 - 47,159,686 (4,337)
query : 1 - 4,339 (4,339/4,361)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026621)
HIX0021387
HIT000007880
(
AK024606
)
Representative transcript
(Conserved hypothetical protein.)
genome : 47,162,752 - 47,164,731 (1,980)
query : 1 - 1,980 (1,980/1,995)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12, extr 7, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021387)
HIX0011300
HIT000568702 (
ENST00000463929
)
(Leucine-rich repeat and calponin homology domain-containing protein 1; Calponin homology domain-containing protein 1; Neuronal protein 81; NP81;)
genome : 47,253,971 - 47,266,712 (12,742)
query : 1 - 554 (554/554)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 10.5, mito 8, extr 6, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011300)
HIX0011300
HIT000582520 (
ENST00000478412
)
(Leucine-rich repeat and calponin homology domain-containing protein 1; Calponin homology domain-containing protein 1; Neuronal protein 81; NP81;)
genome : 47,254,169 - 47,263,296 (9,128)
query : 1 - 545 (545/545)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, extr 9, cyto_nucl 9, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011300)
HIX0011300
HIT000091187
(
BC026097
)
(Leucine-rich repeat and calponin homology domain-containing protein 1 isoform 3.)
genome : 47,269,027 - 47,325,696 (56,670)
query : 3 - 1,885 (1,883/1,914)
11 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;0.987;0.999)3'
coverage = 0.999
InterPro :
IPR001715 : Calponin homology domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15, nucl 10.5, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011300)
HIX0022370
HIT000006890
(
AK023616
)
Representative transcript
(Conserved hypothetical protein.)
genome : 47,299,111 - 47,300,997 (1,887)
query : 1 - 1,887 (1,887/1,887)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, nucl 12, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022370)
HIX0011300
HIT000043527
(
AK123654
)
(Leucine-rich repeat and calponin homology domain-containing protein 1; Calponin homology domain-containing protein 1; Neuronal protein 81; NP81;)
genome : 47,314,795 - 47,317,862 (3,068)
query : 1 - 3,068 (3,068/3,090)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, mito 5.5, E.R._mito 4.5, plas 4, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011300)
HIX0011302
HIT000005099
(
AK021825
)
(S-formylglutathione hydrolase; FGH; EC=3.1.2.12; Esterase D; Methylumbelliferyl-acetate deacetylase; EC=3.1.1.56;)
genome : 47,345,373 - 47,347,952 (2,580)
query : 1 - 2,580 (2,580/2,580)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
EC number :
EC 3.1.1.56
,
EC 3.1.2.12
KEGG pathway :
00680 : Methane metabolism (75)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 10, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011302)
HIX0011302
HIT000001899
(
AF112219
)
Representative transcript
(S-formylglutathione hydrolase; FGH; EC=3.1.2.12; Esterase D; Methylumbelliferyl-acetate deacetylase; EC=3.1.1.56;)
genome : 47,345,391 - 47,371,367 (25,977)
query : 1 - 1,192 (1,192/1,208)
10 exons
identity = 0.997
3'(1.000;0.977;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.56
,
EC 3.1.2.12
KEGG pathway :
00680 : Methane metabolism (75)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 15.5, extr 4, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011302)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB174371
Mus
sp. (Mouse) : AK079131
Danio
sp. (Zebrafish) : BC093144
Bos
sp. (Cow) : BC123461
Gallus
sp. (Chicken) : CR385455
Tetraodon
sp. (Tetraodon) : CR696511
Canis
sp. (Dog) : ENSCAFT00000007207
Equus
sp. (Horse) : ENSECAT00000026161
Monodelphis
sp. (Opossum) : ENSMODT00000034598
Oryzias
sp. (Medaka) : ENSORLT00000017508
Rattus
sp. (Rat) : ENSRNOT00000013324
Tetraodon
sp. (Tetraodon) : GSTENT00007723001
Pan
sp. (Chimpanzee) : XM_001150156
HIX0011302
HIT000316940 (
NM_001984
)
(S-formylglutathione hydrolase; FGH; EC=3.1.2.12; Esterase D; Methylumbelliferyl-acetate deacetylase; EC=3.1.1.56;)
genome : 47,345,391 - 47,371,367 (25,977)
query : 1 - 1,192 (1,192/1,208)
10 exons
identity = 0.997
3'(1.000;0.977;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.56
,
EC 3.1.2.12
KEGG pathway :
00680 : Methane metabolism (75)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 15.5, extr 4, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011302)
HIX0011302
HIT000194217
(
M13450
)
(S-formylglutathione hydrolase; FGH; EC=3.1.2.12; Esterase D; Methylumbelliferyl-acetate deacetylase; EC=3.1.1.56;)
genome : 47,345,391 - 47,367,557 (22,167)
query : 10 - 1,054 (1,045/1,069)
9 exons
identity = 0.983
3'(1.000;0.977;1.000;1.000;0.952;0.942;0.978;
1.000;1.000)5'
coverage = 0.978
EC number :
EC 3.1.1.56
,
EC 3.1.2.12
KEGG pathway :
00680 : Methane metabolism (75)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000801 : Putative esterase
IPR014186 : S-formylglutathione hydrolase
IPR029058 : Alpha/Beta hydrolase fold
GO :
0018738 : Molecular Function : S-formylglutathione hydrolase activity
0046294 : Biological Process : formaldehyde catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12.5, extr 10, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011302)
HIX0011302
HIT000360000 (
ENST00000378720
)
(S-formylglutathione hydrolase; FGH; EC=3.1.2.12; Esterase D; Methylumbelliferyl-acetate deacetylase; EC=3.1.1.56;)
genome : 47,345,391 - 47,371,367 (25,977)
query : 1 - 1,192 (1,192/1,192)
10 exons
identity = 0.997
3'(1.000;0.977;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.56
,
EC 3.1.2.12
KEGG pathway :
00680 : Methane metabolism (75)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 15.5, extr 4, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011302)
HIX0011302
HIT000030192
(
BC001169
)
(S-formylglutathione hydrolase; FGH; EC=3.1.2.12; Esterase D; Methylumbelliferyl-acetate deacetylase; EC=3.1.1.56;)
genome : 47,345,483 - 47,371,282 (25,800)
query : 1 - 1,015 (1,015/1,032)
10 exons
identity = 0.995
3'(0.993;0.977;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.56
,
EC 3.1.2.12
KEGG pathway :
00680 : Methane metabolism (75)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000801 : Putative esterase
IPR014186 : S-formylglutathione hydrolase
IPR029058 : Alpha/Beta hydrolase fold
GO :
0018738 : Molecular Function : S-formylglutathione hydrolase activity
0046294 : Biological Process : formaldehyde catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, extr 6, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011302)
HIX0011302
HIT000359977 (
ENST00000378697
)
(S-formylglutathione hydrolase; AtSFGH; EC=3.1.2.12; Esterase D;)
genome : 47,345,483 - 47,371,268 (25,786)
query : 1 - 1,066 (1,066/1,079)
11 exons
identity = 0.996
3'(1.000;0.977;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.2.12
KEGG pathway :
00680 : Methane metabolism (75)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12.5, mito 5, extr 4, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011302)
HIX0011302
HIT000023370
(
AK098540
)
(S-formylglutathione hydrolase; FGH; EC=3.1.2.12; Esterase D; Methylumbelliferyl-acetate deacetylase; EC=3.1.1.56;)
genome : 47,345,484 - 47,371,296 (25,813)
query : 1 - 1,028 (1,028/1,028)
10 exons
identity = 0.996
3'(1.000;0.977;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.56
,
EC 3.1.2.12
KEGG pathway :
00680 : Methane metabolism (75)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000801 : Putative esterase
IPR014186 : S-formylglutathione hydrolase
IPR029058 : Alpha/Beta hydrolase fold
GO :
0018738 : Molecular Function : S-formylglutathione hydrolase activity
0046294 : Biological Process : formaldehyde catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 15.5, extr 4, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011302)
HIX0011302
HIT000099979
(
BT007059
)
(S-formylglutathione hydrolase; FGH; EC=3.1.2.12; Esterase D; Methylumbelliferyl-acetate deacetylase; EC=3.1.1.56;)
genome : 47,345,553 - 47,365,548 (19,996)
query : 1 - 847 (847/849)
8 exons
identity = 0.994
3'(0.987;0.977;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.998
EC number :
EC 3.1.1.56
,
EC 3.1.2.12
KEGG pathway :
00680 : Methane metabolism (75)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000801 : Putative esterase
IPR014186 : S-formylglutathione hydrolase
IPR029058 : Alpha/Beta hydrolase fold
GO :
0018738 : Molecular Function : S-formylglutathione hydrolase activity
0046294 : Biological Process : formaldehyde catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, extr 6, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011302)
HIX0011302
HIT000066760
(
AF085881
)
(Conserved hypothetical protein.)
genome : 47,349,522 - 47,350,107 (586)
query : 1 - 586 (586/595)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, mito 8, cyto_nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011302)
HIX0011302
HIT000510516 (
ENST00000412582
)
(S-formylglutathione hydrolase; FGH; EC=3.1.2.12; Esterase D; Methylumbelliferyl-acetate deacetylase; EC=3.1.1.56;)
genome : 47,349,518 - 47,358,485 (8,968)
query : 1 - 921 (921/921)
6 exons
identity = 0.996
3'(1.000;0.977;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.56
,
EC 3.1.2.12
KEGG pathway :
00680 : Methane metabolism (75)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 11, extr 7, nucl 5, cysk 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011302)
HIX0011302
HIT000018510
(
AK093643
)
(S-formylglutathione hydrolase; FGH; EC=3.1.2.12; Esterase D; Methylumbelliferyl-acetate deacetylase; EC=3.1.1.56;)
genome : 47,349,523 - 47,355,703 (6,181)
query : 1 - 2,408 (2,408/2,408)
3 exons
identity = 0.997
3'(0.996;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.56
,
EC 3.1.2.12
KEGG pathway :
00680 : Methane metabolism (75)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000801 : Putative esterase
IPR014186 : S-formylglutathione hydrolase
IPR029058 : Alpha/Beta hydrolase fold
GO :
0018738 : Molecular Function : S-formylglutathione hydrolase activity
0046294 : Biological Process : formaldehyde catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 12.5, cyto_nucl 9, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011302)
HIX0011302
HIT000576273 (
ENST00000471867
)
(S-formylglutathione hydrolase; FGH; EC=3.1.2.12; Esterase D; Methylumbelliferyl-acetate deacetylase; EC=3.1.1.56;)
genome : 47,351,242 - 47,354,166 (2,925)
query : 1 - 614 (614/614)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.56
,
EC 3.1.2.12
KEGG pathway :
00680 : Methane metabolism (75)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, extr 13, cyto_nucl 8.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011302)
HIX0011302
HIT000599013 (
ENST00000495654
)
(S-formylglutathione hydrolase; FGH; EC=3.1.2.12; Esterase D; Methylumbelliferyl-acetate deacetylase; EC=3.1.1.56;)
genome : 47,354,089 - 47,367,573 (13,485)
query : 1 - 701 (701/701)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.56
,
EC 3.1.2.12
KEGG pathway :
00680 : Methane metabolism (75)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 8.5, extr_plas 8.5, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011302)
HIX0011302
HIT000101245
(
D28416
)
(Non-protein coding transcript.)
genome : 47,367,527 - 47,371,283 (3,757)
query : 1 - 97 (97/105)
2 exons
identity = 0.990
3'(0.981;1.000)5'
coverage = 0.924
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011302)
HIX0026550
HIT000197651 (
NM_000621
)
(5-hydroxytryptamine receptor 2A; 5-HT-2; 5-HT-2A; Serotonin receptor 2A;)
genome : 47,405,677 - 47,471,211 (65,535)
query : 1 - 5,442 (5,442/5,442)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026550)
HIX0026550
HIT000654193 (
NM_001165947
)
(5-hydroxytryptamine receptor 2A; 5-HT-2; 5-HT-2A; Serotonin receptor 2A;)
genome : 47,405,677 - 47,471,211 (65,535)
query : 1 - 4,702 (4,702/4,702)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026550)
HIX0026550
HIT000322157
(
X57830
)
(5-hydroxytryptamine receptor 2A; 5-HT-2; 5-HT-2A; Serotonin receptor 2A;)
genome : 47,407,513 - 47,470,173 (62,661)
query : 14 - 3,007 (2,994/3,016)
3 exons
identity = 0.993
3'(0.992;1.000;0.996)5'
coverage = 0.993
InterPro :
IPR000455 : 5-Hydroxytryptamine 2A receptor
IPR002231 : 5-hydroxytryptamine receptor family
GO :
0004993 : Molecular Function : serotonin receptor activity
0005887 : Cellular Component : integral component of plasma membrane
0006939 : Biological Process : smooth muscle contraction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0043198 : Cellular Component : dendritic shaft
0046883 : Biological Process : regulation of hormone secretion
0050795 : Biological Process : regulation of behavior
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026550)
HIX0026550
HIT000641709 (
ENST00000542664
)
(5-hydroxytryptamine receptor 2A; 5-HT-2; 5-HT-2A; Serotonin receptor 2A;)
genome : 47,407,513 - 47,471,169 (63,657)
query : 1 - 3,564 (3,564/3,564)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026550)
HIX0026550
HIT000643001 (
ENST00000543956
)
(5-hydroxytryptamine receptor 2A; 5-HT-2; 5-HT-2A; Serotonin receptor 2A;)
genome : 47,407,513 - 47,471,169 (63,657)
query : 1 - 2,824 (2,824/2,824)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026550)
HIX0026550
HIT000359968 (
ENST00000378688
)
(5-hydroxytryptamine receptor 2A; 5-HT-2; 5-HT-2A; Serotonin receptor 2A;)
genome : 47,407,513 - 47,470,173 (62,661)
query : 1 - 3,007 (3,007/3,007)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026550)
HIX0026550
HIT000056424
(
BX647777
)
(5-hydroxytryptamine receptor 2A; 5-HT-2; 5-HT-2A; Serotonin receptor 2A;)
genome : 47,407,678 - 47,470,994 (63,317)
query : 2 - 2,485 (2,484/2,501)
3 exons
identity = 0.999
3'(1.000;1.000;0.995)5'
coverage = 1.000
InterPro :
IPR000455 : 5-Hydroxytryptamine 2A receptor
GO :
0004993 : Molecular Function : serotonin receptor activity
0005887 : Cellular Component : integral component of plasma membrane
0006939 : Biological Process : smooth muscle contraction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0043198 : Cellular Component : dendritic shaft
0046883 : Biological Process : regulation of hormone secretion
0050795 : Biological Process : regulation of behavior
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026550)
HIX0026550
HIT000263507
(
BC069356
)
(5-hydroxytryptamine receptor 2A; 5-HT-2; 5-HT-2A; Serotonin receptor 2A;)
genome : 47,408,628 - 47,470,120 (61,493)
query : 1 - 1,838 (1,838/1,838)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000455 : 5-Hydroxytryptamine 2A receptor
IPR002231 : 5-hydroxytryptamine receptor family
GO :
0004993 : Molecular Function : serotonin receptor activity
0005887 : Cellular Component : integral component of plasma membrane
0006939 : Biological Process : smooth muscle contraction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0043198 : Cellular Component : dendritic shaft
0046883 : Biological Process : regulation of hormone secretion
0050795 : Biological Process : regulation of behavior
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026550)
HIX0026550
HIT000263727
(
BC069576
)
(5-hydroxytryptamine receptor 2A; 5-HT-2; 5-HT-2A; Serotonin receptor 2A;)
genome : 47,408,628 - 47,470,120 (61,493)
query : 1 - 1,838 (1,838/1,838)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000455 : 5-Hydroxytryptamine 2A receptor
IPR002231 : 5-hydroxytryptamine receptor family
GO :
0004993 : Molecular Function : serotonin receptor activity
0005887 : Cellular Component : integral component of plasma membrane
0006939 : Biological Process : smooth muscle contraction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0043198 : Cellular Component : dendritic shaft
0046883 : Biological Process : regulation of hormone secretion
0050795 : Biological Process : regulation of behavior
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026550)
HIX0026550
HIT000497411
(
AK302787
)
(5-hydroxytryptamine receptor 2A; 5-HT-2; 5-HT-2A; Serotonin receptor 2A;)
genome : 47,408,737 - 47,471,050 (62,314)
query : 1 - 1,481 (1,481/1,481)
3 exons
identity = 0.999
3'(1.000;1.000;0.996)5'
coverage = 1.000
InterPro :
IPR000455 : 5-Hydroxytryptamine 2A receptor
GO :
0004993 : Molecular Function : serotonin receptor activity
0005887 : Cellular Component : integral component of plasma membrane
0006939 : Biological Process : smooth muscle contraction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0043198 : Cellular Component : dendritic shaft
0046883 : Biological Process : regulation of hormone secretion
0050795 : Biological Process : regulation of behavior
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026550)
HIX0026550
HIT000216393
(
S71229
)
(5-hydroxytryptamine receptor 2A; 5-HT-2; 5-HT-2A; Serotonin receptor 2A;)
genome : 47,408,912 - 47,470,091 (61,180)
query : 1 - 1,526 (1,526/1,526)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000455 : 5-Hydroxytryptamine 2A receptor
IPR002231 : 5-hydroxytryptamine receptor family
GO :
0004993 : Molecular Function : serotonin receptor activity
0005887 : Cellular Component : integral component of plasma membrane
0006939 : Biological Process : smooth muscle contraction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0043198 : Cellular Component : dendritic shaft
0046883 : Biological Process : regulation of hormone secretion
0050795 : Biological Process : regulation of behavior
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026550)
HIX0026550
HIT000265355
(
BC074848
)
(5-hydroxytryptamine receptor 2A; 5-HT-2; 5-HT-2A; Serotonin receptor 2A;)
genome : 47,408,935 - 47,470,068 (61,134)
query : 1 - 1,480 (1,480/1,480)
3 exons
identity = 0.999
3'(1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR000455 : 5-Hydroxytryptamine 2A receptor
IPR002231 : 5-hydroxytryptamine receptor family
GO :
0004993 : Molecular Function : serotonin receptor activity
0005887 : Cellular Component : integral component of plasma membrane
0006939 : Biological Process : smooth muscle contraction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0043198 : Cellular Component : dendritic shaft
0046883 : Biological Process : regulation of hormone secretion
0050795 : Biological Process : regulation of behavior
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026550)
HIX0026550
HIT000265356
(
BC074849
)
(5-hydroxytryptamine receptor 2A; 5-HT-2; 5-HT-2A; Serotonin receptor 2A;)
genome : 47,408,935 - 47,470,068 (61,134)
query : 1 - 1,480 (1,480/1,480)
3 exons
identity = 0.999
3'(1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR000455 : 5-Hydroxytryptamine 2A receptor
IPR002231 : 5-hydroxytryptamine receptor family
GO :
0004993 : Molecular Function : serotonin receptor activity
0005887 : Cellular Component : integral component of plasma membrane
0006939 : Biological Process : smooth muscle contraction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0043198 : Cellular Component : dendritic shaft
0046883 : Biological Process : regulation of hormone secretion
0050795 : Biological Process : regulation of behavior
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026550)
HIX0026550
HIT000432998
(
AK314132
)
Representative transcript
(5-hydroxytryptamine receptor 2A; 5-HT-2; 5-HT-2A; Serotonin receptor 2A;)
genome : 47,408,972 - 47,470,968 (61,997)
query : 1 - 1,904 (1,904/1,904)
4 exons
identity = 0.999
3'(1.000;1.000;0.999;0.994)5'
coverage = 1.000
InterPro :
IPR000455 : 5-Hydroxytryptamine 2A receptor
IPR002231 : 5-hydroxytryptamine receptor family
GO :
0004993 : Molecular Function : serotonin receptor activity
0005887 : Cellular Component : integral component of plasma membrane
0006939 : Biological Process : smooth muscle contraction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0043198 : Cellular Component : dendritic shaft
0046883 : Biological Process : regulation of hormone secretion
0050795 : Biological Process : regulation of behavior
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026550)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : AB119637
Macaca
sp. (Macaque) : AB171602
Canis
sp. (Dog) : AB193092
Equus
sp. (Horse) : AB264327
Mus
sp. (Mouse) : AK053140
Pongo
sp. (Orangutan) : CR861189
Oryzias
sp. (Medaka) : ENSORLT00000010603
Oryzias
sp. (Medaka) : ENSORLT00000017545
Tetraodon
sp. (Tetraodon) : GSTENT00034479001
Rattus
sp. (Rat) : M64867
Takifugu
sp. (Fugu) : SINFRUT00000171811
Monodelphis
sp. (Opossum) : XM_001378937
Gallus
sp. (Chicken) : XM_425628
Pan
sp. (Chimpanzee) : XM_522752
Danio
sp. (Zebrafish) : XM_683178
Danio
sp. (Zebrafish) : XM_684208
HIX0026550
HIT000335739
(
BC096839
)
(5-hydroxytryptamine receptor 2A; 5-HT-2; 5-HT-2A; Serotonin receptor 2A;)
genome : 47,408,972 - 47,470,042 (61,071)
query : 1 - 1,417 (1,417/1,417)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000455 : 5-Hydroxytryptamine 2A receptor
IPR002231 : 5-hydroxytryptamine receptor family
GO :
0004993 : Molecular Function : serotonin receptor activity
0005887 : Cellular Component : integral component of plasma membrane
0006939 : Biological Process : smooth muscle contraction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0043198 : Cellular Component : dendritic shaft
0046883 : Biological Process : regulation of hormone secretion
0050795 : Biological Process : regulation of behavior
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026550)
HIX0026550
HIT000080919
(
AF498982
)
(5-hydroxytryptamine receptor 2A; 5-HT-2; 5-HT-2A; Serotonin receptor 2A;)
genome : 47,408,972 - 47,470,041 (61,070)
query : 1 - 1,416 (1,416/1,416)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000455 : 5-Hydroxytryptamine 2A receptor
IPR002231 : 5-hydroxytryptamine receptor family
GO :
0004993 : Molecular Function : serotonin receptor activity
0005887 : Cellular Component : integral component of plasma membrane
0006939 : Biological Process : smooth muscle contraction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0043198 : Cellular Component : dendritic shaft
0046883 : Biological Process : regulation of hormone secretion
0050795 : Biological Process : regulation of behavior
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026550)
HIX0026550
HIT000398627
(
S42168
)
(5-hydroxytryptamine receptor 2A; 5-HT-2; 5-HT-2A; Serotonin receptor 2A;)
genome : 47,408,972 - 47,409,774 (803)
query : 1 - 803 (803/803)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR000455 : 5-Hydroxytryptamine 2A receptor
GO :
0004993 : Molecular Function : serotonin receptor activity
0005887 : Cellular Component : integral component of plasma membrane
0006939 : Biological Process : smooth muscle contraction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0043198 : Cellular Component : dendritic shaft
0046883 : Biological Process : regulation of hormone secretion
0050795 : Biological Process : regulation of behavior
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026550)
HIX0026550
HIT000196647
(
M86841
)
(5-hydroxytryptamine receptor 2A; 5-HT-2; 5-HT-2A; Serotonin receptor 2A;)
genome : 47,408,996 - 47,470,017 (61,022)
query : 1 - 1,368 (1,368/1,368)
3 exons
identity = 0.997
3'(0.995;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000455 : 5-Hydroxytryptamine 2A receptor
IPR002231 : 5-hydroxytryptamine receptor family
GO :
0004993 : Molecular Function : serotonin receptor activity
0005887 : Cellular Component : integral component of plasma membrane
0006939 : Biological Process : smooth muscle contraction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0043198 : Cellular Component : dendritic shaft
0046883 : Biological Process : regulation of hormone secretion
0050795 : Biological Process : regulation of behavior
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026550)
HIX0026550
HIT000383138
(
AB037513
)
(5-hydroxytryptamine receptor 2A; 5-HT-2; 5-HT-2A; Serotonin receptor 2A;)
genome : 47,409,007 - 47,409,742 (736)
query : 1 - 736 (736/736)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR000455 : 5-Hydroxytryptamine 2A receptor
GO :
0004993 : Molecular Function : serotonin receptor activity
0005887 : Cellular Component : integral component of plasma membrane
0006939 : Biological Process : smooth muscle contraction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0043198 : Cellular Component : dendritic shaft
0046883 : Biological Process : regulation of hormone secretion
0050795 : Biological Process : regulation of behavior
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026550)
HIX0026550
HIT000398630
(
S50130
)
(Non-protein coding transcript.)
genome : 47,409,734 - 47,409,782 (49)
query : 1 - 49 (49/49)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026550)
HIX0171855
HIT000553060 (
ENST00000455126
)
(Non-protein coding transcript.)
genome : 47,426,278 - 47,430,434 (4,157)
query : 1 - 294 (294/294)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171855)
HIX0171855
HIT000528847 (
ENST00000430913
)
(Hypothetical short protein.)
genome : 47,426,287 - 47,430,434 (4,148)
query : 1 - 428 (428/428)
3 exons
identity = 0.995
5'(1.000;0.993;0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171855)
HIX0171855
HIT000550286 (
ENST00000452352
)
(Non-protein coding transcript.)
genome : 47,426,287 - 47,428,382 (2,096)
query : 1 - 384 (384/384)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171855)
HIX0026550
HIT000398629
(
S50113
)
(5-hydroxytryptamine receptor 2A isoform 2.)
genome : 47,466,517 - 47,466,733 (217)
query : 1 - 217 (217/217)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR000455 : 5-Hydroxytryptamine 2A receptor
GO :
0004993 : Molecular Function : serotonin receptor activity
0005887 : Cellular Component : integral component of plasma membrane
0006939 : Biological Process : smooth muscle contraction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0043198 : Cellular Component : dendritic shaft
0046883 : Biological Process : regulation of hormone secretion
0050795 : Biological Process : regulation of behavior
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026550)
HIX0026550
HIT000398626
(
S42167
)
(5-hydroxytryptamine receptor 2A; 5-HT-2; 5-HT-2A; 5-hydroxytryptamine receptor; Serotonin receptor 2A;)
genome : 47,466,525 - 47,466,725 (201)
query : 1 - 201 (201/201)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR000455 : 5-Hydroxytryptamine 2A receptor
GO :
0004993 : Molecular Function : serotonin receptor activity
0005887 : Cellular Component : integral component of plasma membrane
0006939 : Biological Process : smooth muscle contraction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0043198 : Cellular Component : dendritic shaft
0046883 : Biological Process : regulation of hormone secretion
0050795 : Biological Process : regulation of behavior
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026550)
HIX0026550
HIT000398628
(
S49737
)
(Non-protein coding transcript.)
genome : 47,469,622 - 47,469,729 (108)
query : 1 - 108 (108/108)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026550)
HIX0026550
HIT000398625
(
S42165
)
(5-hydroxytryptamine receptor 2A; 5-HT-2; 5-HT-2A; Serotonin receptor 2A;)
genome : 47,469,630 - 47,470,041 (412)
query : 1 - 412 (412/412)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
InterPro :
IPR000455 : 5-Hydroxytryptamine 2A receptor
GO :
0004993 : Molecular Function : serotonin receptor activity
0005887 : Cellular Component : integral component of plasma membrane
0006939 : Biological Process : smooth muscle contraction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0043198 : Cellular Component : dendritic shaft
0046883 : Biological Process : regulation of hormone secretion
0050795 : Biological Process : regulation of behavior
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026550)
HIX0011303
HIT000007797
(
AK024523
)
Representative transcript
(Conserved hypothetical protein.)
genome : 47,782,884 - 47,784,287 (1,404)
query : 1 - 1,397 (1,397/1,414)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, cyto 9.5, cyto_nucl 9, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011303)
HIX0172014
HIT000518378 (
ENST00000420444
)
(G-protein gamma-like domain containing protein.)
genome : 47,881,217 - 47,881,436 (220)
query : 1 - 220 (220/220)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 6, cyto 5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172014)
HIX0011298
HIT000199213 (
NM_002298
)
(Plastin-2; L-plastin; LC64P; Lymphocyte cytosolic protein 1; LCP-1;)
genome : 46,700,058 - 46,756,459 (56,402)
query : 1 - 3,790 (3,790/3,808)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, cyto_nucl 17, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011298)
HIX0011298
HIT000033370
(
BC007673
)
(Plastin-2; L-plastin; LC64P; Lymphocyte cytosolic protein 1; LCP-1;)
genome : 46,700,058 - 46,756,297 (56,240)
query : 1 - 3,628 (3,628/3,645)
16 exons
identity = 0.999
3'(0.999;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001589 : Actinin-type actin-binding domain, conserved site
IPR001715 : Calponin homology domain
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0003779 : Molecular Function : actin binding
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 13.5, mito 3, pero 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011298)
HIX0011298
HIT000307068
(
CR936795
)
(Plastin-2; L-plastin; LC64P; Lymphocyte cytosolic protein 1; LCP-1;)
genome : 46,700,058 - 46,742,699 (42,642)
query : 1 - 3,678 (3,678/3,693)
16 exons
identity = 0.999
3'(0.998;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001589 : Actinin-type actin-binding domain, conserved site
IPR001715 : Calponin homology domain
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0003779 : Molecular Function : actin binding
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, cyto_nucl 17, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011298)
HIX0011298
HIT000481757 (
ENST00000398576
)
(Plastin-2; L-plastin; LC64P; Lymphocyte cytosolic protein 1; LCP-1;)
genome : 46,700,055 - 46,785,483 (85,429)
query : 1 - 3,944 (3,944/3,944)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, cyto_nucl 17, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011298)
HIX0011298
HIT000123372 (
ENST00000323076
)
(Plastin-2; L-plastin; LC64P; Lymphocyte cytosolic protein 1; LCP-1;)
genome : 46,700,061 - 46,756,459 (56,399)
query : 1 - 3,787 (3,787/3,787)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, cyto_nucl 17, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011298)
HIX0011298
HIT000034874
(
BC010271
)
Representative transcript
(Plastin-2; L-plastin; LC64P; Lymphocyte cytosolic protein 1; LCP-1;)
genome : 46,700,112 - 46,756,361 (56,250)
query : 1 - 3,638 (3,638/3,668)
16 exons
identity = 0.999
3'(0.999;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001589 : Actinin-type actin-binding domain, conserved site
IPR001715 : Calponin homology domain
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0003779 : Molecular Function : actin binding
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, cyto_nucl 17, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011298)
HIX0011298
HIT000191100
(
J02923
)
(Plastin-2; L-plastin; LC64P; Lymphocyte cytosolic protein 1; LCP-1;)
genome : 46,700,507 - 46,756,295 (55,789)
query : 1 - 3,175 (3,175/3,175)
16 exons
identity = 0.995
3'(0.988;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001589 : Actinin-type actin-binding domain, conserved site
IPR001715 : Calponin homology domain
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0003779 : Molecular Function : actin binding
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 13.5, mito 3, pero 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011298)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB179173
Gallus
sp. (Chicken) : AJ719624
Mus
sp. (Mouse) : BC022943
Danio
sp. (Zebrafish) : BC062381
Rattus
sp. (Rat) : BC083855
Bos
sp. (Cow) : BC103001
Tetraodon
sp. (Tetraodon) : CR678287
Monodelphis
sp. (Opossum) : ENSMODT00000014534
Oryzias
sp. (Medaka) : ENSORLT00000017971
Pongo
sp. (Orangutan) : ENSPPYT00000006327
Takifugu
sp. (Fugu) : SINFRUT00000177353
Pan
sp. (Chimpanzee) : XM_001157991
Equus
sp. (Horse) : XM_001490588
Canis
sp. (Dog) : XM_843311
HIX0011298
HIT000331085
(
AK223305
)
(Plastin-2; L-plastin; LC64P; Lymphocyte cytosolic protein 1; LCP-1;)
genome : 46,700,653 - 46,756,394 (55,742)
query : 1 - 3,130 (3,130/3,130)
16 exons
identity = 0.998
3'(0.998;1.000;0.992;1.000;1.000;0.987;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001589 : Actinin-type actin-binding domain, conserved site
IPR001715 : Calponin homology domain
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0003779 : Molecular Function : actin binding
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, cyto_nucl 17, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011298)
HIX0011298
HIT000328919
(
AB208984
)
(Plastin-2; L-plastin; LC64P; Lymphocyte cytosolic protein 1; LCP-1;)
genome : 46,701,476 - 46,756,304 (54,829)
query : 1 - 2,216 (2,216/2,216)
16 exons
identity = 0.999
3'(1.000;1.000;0.992;0.993;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001589 : Actinin-type actin-binding domain, conserved site
IPR001715 : Calponin homology domain
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0003779 : Molecular Function : actin binding
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 13.5, mito 3, pero 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011298)
HIX0011298
HIT000431259
(
AK312393
)
(EF-hand domain pair containing protein.)
genome : 46,701,726 - 46,756,323 (54,598)
query : 2 - 1,988 (1,987/1,988)
16 exons
identity = 0.998
3'(1.000;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.975)5'
coverage = 0.999
InterPro :
IPR001589 : Actinin-type actin-binding domain, conserved site
IPR001715 : Calponin homology domain
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0003779 : Molecular Function : actin binding
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, cyto_nucl 17, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011298)
HIX0011298
HIT000194830
(
M22300
)
(Plastin-2; L-plastin; LC64P; Lymphocyte cytosolic protein 1; LCP-1;)
genome : 46,701,726 - 46,733,017 (31,292)
query : 1 - 1,713 (1,713/1,713)
14 exons
identity = 0.999
3'(1.000;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001589 : Actinin-type actin-binding domain, conserved site
IPR001715 : Calponin homology domain
IPR002048 : EF-hand domain
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0003779 : Molecular Function : actin binding
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011298)
HIX0220898
HIT000045823
(
AK125950
)
Representative transcript
(Domain of unknown function DUF4206 domain containing protein.)
genome : 46,917,102 - 47,012,325 (95,224)
query : 1 - 2,997 (2,997/2,997)
15 exons
identity = 0.997
3'(0.998;1.000;0.994;1.000;1.000;1.000;1.000;
0.992;1.000;1.000;0.981;1.000;1.000;1.000;
0.996)5'
coverage = 1.000
InterPro :
IPR025258 : Domain of unknown function DUF4206
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220898)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK155201
Bos
sp. (Cow) : BC151662
Macaca
sp. (Macaque) : ENSMMUT00000013781
Monodelphis
sp. (Opossum) : ENSMODT00000014468
Pongo
sp. (Orangutan) : ENSPPYT00000006329
Rattus
sp. (Rat) : XM_001071603
Pan
sp. (Chimpanzee) : XM_001156348
Equus
sp. (Horse) : XM_001915378
Gallus
sp. (Chicken) : XM_417049
Canis
sp. (Dog) : XM_542570
Danio
sp. (Zebrafish) : XM_684987
HIX0220898
HIT000507903 (
ENST00000409879
)
(Domain of unknown function DUF4206 domain containing protein.)
genome : 46,917,102 - 47,012,325 (95,224)
query : 1 - 2,997 (2,997/2,997)
15 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.970;0.981;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 1, mito 1, pero 1, lyso 1, cyto_mito 1,
mito_pero 1, cyto_pero 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220898)
HIX0220898
HIT000634118 (
ENST00000535073
)
(Domain of unknown function DUF4206 domain containing protein.)
genome : 46,917,102 - 47,012,325 (95,224)
query : 1 - 2,997 (2,997/2,997)
15 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.981;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220898)
AL445232.5
46500001-46587787 F +
NCBI
AL157758.10
46587788-46645784 F +
NCBI
AL137141.10
46645785-46826364 F -
NCBI
AL139801.17
46826365-46971745 F -
NCBI
AL138686.14
46971746-47086269 F +
NCBI
AL157365.19
47086270-47122476 F +
NCBI
AL138704.12
47122477-47287496 F +
NCBI
AL359880.8
47287497-47318661 F +
NCBI
AL136958.9
47318662-47424878 F +
NCBI
AL160397.17
47424879-47626835 F +
NCBI
AL590790.11
47626836-47652911 F +
NCBI
AL391683.8
47652912-47819284 F +
NCBI
AL354814.19
47819285-47889310 F +
NCBI
AL359180.17
47889311-48046441 F +
NCBI
AL590811.10
48046442-48085021 F +
NCBI
AL157765.6
48085022-48100000 F +
NCBI