bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0172147
HIT000533573 (
ENST00000435639
)
(Conserved hypothetical protein.)
genome : 69,208,322 - 69,208,618 (297)
query : 1 - 297 (297/297)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, extr 10, cyto_nucl 9.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172147)
HIX0172047
HIT000522466 (
ENST00000424532
)
(Conserved hypothetical protein.)
genome : 69,228,704 - 69,229,182 (479)
query : 1 - 479 (479/479)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto_nucl 10, nucl 9.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172047)
HIX0037526
HIT000097316
(
BC042673
)
Representative transcript
(Conserved hypothetical protein.)
genome : 69,435,418 - 69,459,457 (24,040)
query : 1 - 3,432 (3,432/3,446)
3 exons
identity = 0.997
3'(0.998;0.974;0.987)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 10.5, extr 9, cyto_nucl 6, E.R._mito 6,
mito_pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037526)
HIX0037526
HIT000725547 (
NR_038878
)
(Reverse transcriptase domain containing protein.)
genome : 69,435,416 - 69,459,457 (24,042)
query : 1 - 3,434 (3,434/3,434)
3 exons
identity = 0.999
3'(1.000;0.974;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 4, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037526)
HIX0171939
HIT000509355 (
ENST00000411421
)
(Zinc finger, DHHC-type, palmitoyltransferase domain containing protein.)
genome : 69,559,190 - 69,560,196 (1,007)
query : 1 - 1,007 (1,007/1,007)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, extr 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171939)
HIX0172314
HIT000555726 (
ENST00000457792
)
(Conserved hypothetical protein.)
genome : 69,675,964 - 69,676,188 (225)
query : 1 - 225 (225/225)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 4.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172314)
HIX0172129
HIT000531598 (
ENST00000433664
)
(Hypothetical short protein.)
genome : 69,796,478 - 69,866,286 (69,809)
query : 1 - 817 (817/817)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172129)
HIX0172110
HIT000529620 (
ENST00000431686
)
(Conserved hypothetical protein.)
genome : 69,885,465 - 69,896,233 (10,769)
query : 1 - 821 (821/821)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 13.5, cyto_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172110)
HIX0172043
HIT000521992 (
ENST00000424058
)
(Nucleotide-binding alpha-beta plait domain containing protein.)
genome : 69,982,348 - 69,982,867 (520)
query : 1 - 520 (520/520)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172043)
HIX0011359
HIT000039555
(
BC022460
)
(Kelch-like protein 1;)
genome : 70,274,729 - 70,681,867 (407,139)
query : 3 - 3,389 (3,387/3,404)
11 exons
identity = 0.997
3'(0.994;1.000;1.000;1.000;1.000;0.995;0.991;
1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000210 : BTB/POZ-like
IPR006652 : Kelch repeat type 1
IPR011333 : BTB/POZ fold
IPR011705 : BTB/Kelch-associated
IPR013069 : BTB/POZ
IPR015916 : Galactose oxidase, beta-propeller
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011359)
HIX0011359
HIT000208095 (
NM_020866
)
(Kelch-like protein 1;)
genome : 70,274,725 - 70,682,625 (407,901)
query : 1 - 4,150 (4,150/4,159)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011359)
HIX0011359
HIT000075086
(
AF252283
)
(Kelch-like protein 1;)
genome : 70,274,725 - 70,682,459 (407,735)
query : 1 - 3,983 (3,983/3,992)
11 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR006652 : Kelch repeat type 1
IPR011333 : BTB/POZ fold
IPR011705 : BTB/Kelch-associated
IPR013069 : BTB/POZ
IPR015916 : Galactose oxidase, beta-propeller
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011359)
HIX0011359
HIT000001205
(
AB040923
)
Representative transcript
(Kelch-like protein 1;)
genome : 70,274,726 - 70,682,591 (407,866)
query : 1 - 4,115 (4,115/4,115)
11 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011359)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB172938
Mus
sp. (Mouse) : BC094584
Gallus
sp. (Chicken) : CR390984
Bos
sp. (Cow) : ENSBTAT00000011402
Equus
sp. (Horse) : ENSECAT00000020456
Oryzias
sp. (Medaka) : ENSORLT00000003842
Pongo
sp. (Orangutan) : ENSPPYT00000006402
Pan
sp. (Chimpanzee) : ENSPTRT00000010872
Takifugu
sp. (Fugu) : SINFRUT00000157952
Rattus
sp. (Rat) : XM_001075413
Monodelphis
sp. (Opossum) : XM_001362179
Canis
sp. (Dog) : XM_542606
Danio
sp. (Zebrafish) : XM_684094
HIX0011359
HIT000359124 (
ENST00000377844
)
(Kelch-like protein 1;)
genome : 70,274,726 - 70,682,591 (407,866)
query : 1 - 4,115 (4,115/4,115)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011359)
HIX0011359
HIT000424232
(
AK291435
)
(Kelch-like protein 1;)
genome : 70,275,254 - 70,682,625 (407,372)
query : 1 - 3,621 (3,621/3,621)
11 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR006652 : Kelch repeat type 1
IPR011333 : BTB/POZ fold
IPR011705 : BTB/Kelch-associated
IPR013069 : BTB/POZ
IPR015916 : Galactose oxidase, beta-propeller
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011359)
HIX0011359
HIT000490563
(
AK295939
)
(Kelch-like protein 1.)
genome : 70,275,744 - 70,681,814 (406,071)
query : 3 - 2,139 (2,137/2,139)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.995;1.000;
1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000210 : BTB/POZ-like
IPR006652 : Kelch repeat type 1
IPR011333 : BTB/POZ fold
IPR011705 : BTB/Kelch-associated
IPR013069 : BTB/POZ
IPR015915 : Kelch-type beta propeller
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 14.8333, cyto 11.5,
cyto_mito 6.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011359)
HIX0011359
HIT000644073 (
ENST00000545028
)
(Kelch-like protein 1.)
genome : 70,275,744 - 70,681,814 (406,071)
query : 1 - 2,137 (2,137/2,137)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 14.8333, cyto 11.5,
cyto_mito 6.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011359)
HIX0011359
HIT000011223
(
AK054609
)
(Kelch-like protein 1.)
genome : 70,364,465 - 70,681,836 (317,372)
query : 2 - 2,195 (2,194/2,195)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR006652 : Kelch repeat type 1
IPR011333 : BTB/POZ fold
IPR011705 : BTB/Kelch-associated
IPR013069 : BTB/POZ
IPR015916 : Galactose oxidase, beta-propeller
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 16, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011359)
HIX0202033
HIT000556129 (
ENST00000458195
)
(Conserved hypothetical protein.)
genome : 70,468,233 - 70,469,217 (985)
query : 1 - 985 (985/985)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, cyto 11, nucl 8, extr 7, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202033)
AL161894.12
69000001-69049115 F +
NCBI
AL159975.12
69049116-69130316 F +
NCBI
AL355611.11
69130317-69307155 F +
NCBI
AL359072.12
69307156-69358829 F +
NCBI
AL450445.6
69358830-69500596 F +
NCBI
AL359394.9
69500597-69637742 F +
NCBI
AL356264.12
69637743-69730889 F +
NCBI
AL591383.2
69730890-69732883 F +
NCBI
AL356111.13
69732884-69881838 F +
NCBI
AL355478.16
69881839-70054594 F +
NCBI
AL590086.4
70054595-70077118 F +
NCBI
AL354757.7
70077119-70147918 F +
NCBI
AL162378.16
70147919-70323638 F +
NCBI
AL356384.9
70323639-70417438 F +
NCBI
AL596302.4
70417439-70428432 F +
NCBI
AL353738.16
70428433-70550838 F +
NCBI
AL590554.7
70550839-70600000 F +
NCBI