bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0172064
HIT000524371 (
ENST00000426437
)
(Nucleotide-diphospho-sugar transferases domain containing protein.)
genome : 83,397,266 - 83,398,271 (1,006)
query : 1 - 1,006 (1,006/1,006)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10, mito 6, extr 4, pero 3,
E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172064)
HIX0011393
HIT000037626
(
BC016673
)
Representative transcript
(Conserved hypothetical protein.)
genome : 83,493,028 - 83,494,456 (1,429)
query : 1 - 1,429 (1,429/1,443)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 16, nucl 8.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011393)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000006436
AL356269.10
82500001-82533071 F +
NCBI
AL391601.6
82533072-82678842 F +
NCBI
AL353628.7
82678843-82705427 F +
NCBI
AL391354.12
82705428-82786573 F +
NCBI
AL162491.10
82786574-82865847 F +
NCBI
AL355980.6
82865848-83057603 F +
NCBI
AL391355.19
83057604-83137528 F +
NCBI
AL354852.12
83137529-83303310 F +
NCBI
AL139037.12
83303311-83382652 F +
NCBI
AL356294.28
83382653-83515997 F +
NCBI
AL445255.8
83515998-83679008 F +
NCBI
AL390914.6
83679009-83696800 F +
NCBI
AL512782.6
83696801-83881066 F +
NCBI
AL365216.9
83881067-83904999 F +
NCBI
AL445585.8
83905000-84064309 F +
NCBI
AL354715.10
84064310-84100000 F +
NCBI