bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0134039
HIT000467368
(
DQ600837
)
Representative transcript
(Non-protein coding transcript.)
genome : 24,044,008 - 24,044,037 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0134039)
HIX0222717
HIT000676147 (
ENST00000562975
)
(Hypothetical short protein.)
genome : 24,157,556 - 24,180,457 (22,902)
query : 1 - 572 (572/591)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.968
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222717)
HIX0222719
HIT000676187 (
ENST00000563016
)
(Hypothetical short protein.)
genome : 24,220,319 - 24,248,582 (28,264)
query : 1 - 420 (420/420)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222719)
HIX0133495
HIT000455448
(
DQ588917
)
Representative transcript
(Non-protein coding transcript.)
genome : 24,225,818 - 24,225,847 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0133495)
HIX0132957
HIT000443721
(
DQ577190
)
Representative transcript
(Non-protein coding transcript.)
genome : 24,240,522 - 24,240,551 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0132957)
HIX0026789
HIT000679288 (
ENST00000566245
)
(Hypothetical short protein.)
genome : 24,407,901 - 24,415,021 (7,121)
query : 1 - 631 (631/631)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 8, nucl 7, cyto_nucl 6.5, cyto 4,
E.R._mito 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026789)
HIX0026789
HIT000680850 (
ENST00000567854
)
(Hypothetical short protein.)
genome : 24,407,902 - 24,415,004 (7,103)
query : 1 - 351 (351/351)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 8, nucl 7, cyto_nucl 6.5, cyto 4,
E.R._mito 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026789)
HIX0026789
HIT000092879
(
BC032951
)
Representative transcript
(Conserved hypothetical protein.)
genome : 24,409,925 - 24,415,053 (5,129)
query : 4 - 4,255 (4,252/4,270)
2 exons
identity = 0.998
3'(0.998;0.993)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8.5, cyto_nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026789)
HIX0026789
HIT000264078
(
BC070120
)
(Conserved hypothetical protein.)
genome : 24,409,925 - 24,415,051 (5,127)
query : 1 - 4,250 (4,250/4,264)
2 exons
identity = 0.997
3'(0.998;0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8.5, cyto_nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026789)
HIX0026789
HIT000680262 (
ENST00000567246
)
(Conserved hypothetical protein.)
genome : 24,409,924 - 24,415,095 (5,172)
query : 1 - 4,295 (4,295/4,295)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8.5, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026789)
HIX0026789
HIT000562849 (
NR_026647
)
(Conserved hypothetical protein.)
genome : 24,409,926 - 24,415,053 (5,128)
query : 1 - 5,128 (5,128/5,128)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8.5, cyto_nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026789)
HIX0026789
HIT000044004
(
AK124131
)
(Conserved hypothetical protein.)
genome : 24,412,169 - 24,415,095 (2,927)
query : 1 - 2,050 (2,050/2,050)
2 exons
identity = 0.989
3'(0.990;0.983)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 7.5, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026789)
HIX0222191
HIT000675177 (
ENST00000561964
)
(Conserved hypothetical protein.)
genome : 24,480,225 - 24,520,162 (39,938)
query : 1 - 448 (448/448)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 7, nucl 6.5, cyto 4.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222191)
HIX0222773
HIT000678998 (
ENST00000565943
)
(Conserved hypothetical protein.)
genome : 24,483,292 - 24,485,339 (2,048)
query : 1 - 472 (472/472)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222773)
HIX0222191
HIT000679707 (
ENST00000566676
)
(Hypothetical short protein.)
genome : 24,506,426 - 24,521,976 (15,551)
query : 1 - 579 (579/579)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 12.5, nucl 10.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222191)
HIX0222828
HIT000683016 (
ENST00000570105
)
(Hypothetical short protein.)
genome : 24,544,896 - 24,545,785 (890)
query : 1 - 415 (415/415)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 9, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222828)
HIX0038130
HIT000677997_01 (
ENST00000564898
)
(Hypothetical short protein.)
genome : 24,647,156 - 24,897,277 (250,122)
query : 1 - 389 (389/389)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 7, cyto 5, mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038130)
HIX0222780
HIT000679824 (
ENST00000566797
)
(Hypothetical short protein.)
genome : 24,686,274 - 24,693,114 (6,841)
query : 1 - 849 (849/849)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, extr 11, cyto 10, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222780)
HIX0038130
HIT000678949 (
ENST00000565893
)
(Hypothetical protein.)
genome : 24,738,284 - 24,758,291 (20,008)
query : 1 - 818 (818/818)
5 exons
identity = 0.993
5'(1.000;1.000;0.990;0.970;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, nucl 5.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038130)
HIX0038130
HIT000678585 (
ENST00000565512
)
(Conserved hypothetical protein.)
genome : 24,758,217 - 24,779,055 (20,839)
query : 1 - 433 (433/433)
3 exons
identity = 0.979
5'(1.000;0.967;0.977)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 10, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038130)
HIX0038130
HIT000675449 (
ENST00000562244
)
(Hypothetical short protein.)
genome : 24,766,828 - 24,779,055 (12,228)
query : 1 - 364 (364/364)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 6.5, cyto_nucl 5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038130)
HIX0038130
HIT000681036 (
ENST00000568045
)
(Hypothetical short protein.)
genome : 24,778,842 - 24,832,924 (54,083)
query : 1 - 1,299 (1,299/1,299)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, cyto 5, nucl 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038130)
HIX0038130
HIT000678380 (
ENST00000565295
)
(Conserved hypothetical protein.)
genome : 24,792,943 - 24,811,927 (18,985)
query : 1 - 465 (465/465)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, mito 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038130)
HIX0038130
HIT000681583 (
ENST00000568609
)
(Hypothetical short protein.)
genome : 24,803,299 - 24,832,926 (29,628)
query : 1 - 1,443 (1,443/1,443)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 6.5, cyto_nucl 5, mito 4, nucl 2.5,
E.R._mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038130)
HIX0038130
HIT000094822
(
BC037352
)
Representative transcript
(Conserved hypothetical protein.)
genome : 24,803,305 - 24,804,738 (1,434)
query : 3 - 1,435 (1,433/1,510)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, E.R. 6, mito 3, E.R._golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038130)
HIX0038130
HIT000093579
(
BC034815
)
(Hypothetical short protein.)
genome : 24,803,304 - 24,832,925 (29,622)
query : 1 - 1,437 (1,437/1,451)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 6.5, cyto_nucl 5, mito 4, nucl 2.5,
E.R._mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038130)
HIX0038130
HIT000562848 (
NR_026646
)
(Conserved hypothetical protein.)
genome : 24,803,304 - 24,832,925 (29,622)
query : 1 - 1,437 (1,437/1,451)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 6.5, cyto_nucl 5, mito 4, nucl 2.5,
E.R._mito 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038130)
HIX0222825
HIT000682833 (
ENST00000569908
)
(Conserved hypothetical protein.)
genome : 24,803,305 - 24,804,739 (1,435)
query : 1 - 1,435 (1,435/1,435)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, cyto 12, mito 9, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222825)
HIX0038130
HIT000680651 (
ENST00000567647
)
(Hypothetical short protein.)
genome : 24,803,319 - 24,815,276 (11,958)
query : 1 - 544 (544/561)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.970
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038130)
HIX0038130
HIT000678328 (
ENST00000565241
)
(Hypothetical short protein.)
genome : 24,803,364 - 24,813,268 (9,905)
query : 1 - 480 (480/480)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038130)
HIX0038130
HIT000675697 (
ENST00000562501
)
(Hypothetical short protein.)
genome : 24,815,173 - 24,832,920 (17,748)
query : 1 - 642 (642/642)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038130)
HIX0038130
HIT000681010 (
ENST00000568019
)
(Hypothetical short protein.)
genome : 24,832,744 - 24,897,263 (64,520)
query : 1 - 359 (359/359)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038130)
HIX0038177
HIT000126134 (
ENST00000329468
)
(Conserved hypothetical protein.)
genome : 24,920,541 - 24,928,593 (8,053)
query : 1 - 8,053 (8,053/8,053)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito 9, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038177)
HIX0038177
HIT000207497 (
NM_018958
)
(Conserved hypothetical protein.)
genome : 24,920,541 - 24,928,593 (8,053)
query : 1 - 8,053 (8,053/8,053)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito 9, cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038177)
HIX0038177
HIT000451641
(
DQ585110
)
Representative transcript
(Non-protein coding transcript.)
genome : 24,922,089 - 24,922,120 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038177)
HIX0038177
HIT000463233
(
DQ596702
)
(Non-protein coding transcript.)
genome : 24,922,161 - 24,922,190 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038177)
HIX0038177
HIT000440885
(
DQ574354
)
(Non-protein coding transcript.)
genome : 24,923,628 - 24,923,657 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
5'(0.967)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038177)
HIX0038177
HIT000464253
(
DQ597722
)
(Non-protein coding transcript.)
genome : 24,924,786 - 24,924,816 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038177)
HIX0038344
HIT000093877
(
BC035402
)
Representative transcript
(Conserved hypothetical protein.)
genome : 25,093,504 - 25,097,396 (3,893)
query : 1 - 3,894 (3,894/3,909)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 3.5, nucl 3, cyto_pero 2.5,
mito_nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038344)
HIX0211887
HIT000539731_03 (
ENST00000441797
)
(Ribosomal protein L18/L5 family protein.)
genome : 25,154,076 - 25,154,819 (744)
query : 1 - 744 (744/744)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 11, mito 8, nucl 3.5, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211887)
HIX0211887
HIT000565632_02 (
ENST00000460716
)
(Ribosomal protein L18/L5 family protein.)
genome : 25,154,079 - 25,154,972 (894)
query : 1 - 894 (894/894)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.5, nucl 9.5, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211887)
HIX0211893
HIT000574206 (
ENST00000469695
)
(Ribosomal protein S27e family protein.)
genome : 25,156,021 - 25,156,272 (252)
query : 1 - 252 (252/252)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211893)
HIX0222006
HIT000208878 (
NM_022804
)
(SNURFRPN4 family protein.)
genome : 25,200,070 - 25,213,975 (13,906)
query : 1 - 421 (421/437)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 11.5, extr 10, cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222006)
HIX0222006
HIT000689899 (
ENST00000577949
)
(SNURFRPN4 family protein.)
genome : 25,200,133 - 25,213,555 (13,423)
query : 1 - 650 (650/650)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 11.5, extr 10, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222006)
HIX0222006
HIT000130957 (
ENST00000338327
)
(SNURFRPN4 family protein.)
genome : 25,200,161 - 25,213,976 (13,816)
query : 1 - 331 (331/331)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 11.5, extr 10, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222006)
HIX0221995
HIT000079039
(
AF400432
)
Representative transcript
(Ribonucleoprotein LSM domain containing protein.)
genome : 25,220,504 - 25,223,663 (3,160)
query : 18 - 810 (793/810)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.991)3'
coverage = 0.979
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221995)
HIX0221995
HIT000267259
(
CR450350
)
(Ribonucleoprotein LSM domain containing protein.)
genome : 25,220,504 - 25,223,588 (3,085)
query : 3 - 720 (718/720)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.997
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221995)
HIX0221995
HIT000321542
(
X16163
)
(Ribonucleoprotein LSM domain containing protein.)
genome : 25,220,568 - 25,223,647 (3,080)
query : 1 - 713 (713/713)
6 exons
identity = 0.996
5'(1.000;0.991;1.000;0.993;0.992;1.000)3'
coverage = 1.000
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15, nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221995)
HIX0012047
HIT000221620
(
U81001
)
(Conserved hypothetical protein.)
genome : 25,223,730 - 25,228,936 (5,207)
query : 1 - 3,213 (3,213/3,229)
3 exons
identity = 0.995
5'(0.999;1.000;0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 8, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000670411 (
ENST00000557108
)
(Conserved hypothetical protein.)
genome : 25,223,730 - 25,228,933 (5,204)
query : 1 - 3,210 (3,210/3,210)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000665216 (
ENST00000551631
)
(Hypothetical protein.)
genome : 25,224,704 - 25,266,501 (41,798)
query : 1 - 2,696 (2,696/2,696)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000664991 (
ENST00000551361
)
(Hypothetical short protein.)
genome : 25,227,141 - 25,247,977 (20,837)
query : 1 - 550 (550/550)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 9.5, cyto 8.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000486559 (
NR_022011
)
(Conserved hypothetical protein.)
genome : 25,227,141 - 25,228,937 (1,797)
query : 1 - 1,797 (1,797/1,797)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 3, nucl 2, cyto 2, cyto_nucl 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000320649 (
NR_001293
)
(Non-protein coding transcript.)
genome : 25,227,141 - 25,227,215 (75)
query : 1 - 75 (75/75)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000557367 (
ENST00000459433
)
(Non-protein coding transcript.)
genome : 25,227,141 - 25,227,215 (75)
query : 1 - 75 (75/75)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000465182
(
DQ598651
)
(Non-protein coding transcript.)
genome : 25,227,142 - 25,227,171 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000077325
(
AF319524
)
(Hypothetical protein.)
genome : 25,227,155 - 25,266,499 (39,345)
query : 1 - 2,237 (2,237/2,253)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0038071
HIT000486556 (
NR_022008
)
(Conserved hypothetical protein.)
genome : 25,230,007 - 25,233,379 (3,373)
query : 1 - 3,373 (3,373/3,373)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, mito 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038071)
HIX0038071
HIT000062484
(
AF019618
)
Representative transcript
(Conserved hypothetical protein.)
genome : 25,230,200 - 25,233,379 (3,180)
query : 1 - 3,181 (3,181/3,183)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, mito 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038071)
HIX0038071
HIT000320650 (
NR_001294
)
(Non-protein coding transcript.)
genome : 25,230,247 - 25,230,313 (67)
query : 1 - 67 (67/67)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038071)
HIX0038071
HIT000472357 (
ENST00000386683
)
(Non-protein coding transcript.)
genome : 25,230,247 - 25,230,313 (67)
query : 1 - 67 (67/67)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038071)
HIX0038071
HIT000557266 (
ENST00000459332
)
(Non-protein coding transcript.)
genome : 25,232,072 - 25,232,142 (71)
query : 1 - 71 (71/71)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038071)
HIX0038071
HIT000320648 (
NR_001292
)
(Non-protein coding transcript.)
genome : 25,232,072 - 25,232,140 (69)
query : 1 - 69 (69/69)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038071)
HIX0012047
HIT000666533 (
ENST00000553134
)
(Hypothetical short protein.)
genome : 25,245,452 - 25,265,972 (20,521)
query : 1 - 470 (470/470)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000665487 (
ENST00000551938
)
(Hypothetical short protein.)
genome : 25,245,461 - 25,247,551 (2,091)
query : 1 - 1,108 (1,108/1,108)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000079050
(
AF400485
)
(Hypothetical short protein.)
genome : 25,264,182 - 25,299,063 (34,882)
query : 1 - 552 (552/552)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000666221 (
ENST00000552781
)
(Hypothetical short protein.)
genome : 25,264,182 - 25,299,063 (34,882)
query : 1 - 552 (552/552)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0132729
HIT000439071
(
DQ572540
)
Representative transcript
(Non-protein coding transcript.)
genome : 25,272,540 - 25,272,569 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0132729)
HIX0222327
HIT000660837 (
ENST00000546615
)
(Hypothetical short protein.)
genome : 25,272,883 - 25,277,194 (4,312)
query : 1 - 427 (427/427)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10.5, extr 10, cyto_nucl 9.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222327)
HIX0012048
HIT000665832 (
ENST00000552334
)
(Hypothetical protein.)
genome : 25,277,020 - 25,281,637 (4,618)
query : 1 - 4,618 (4,618/4,618)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 9.5, cyto_pero 8.83333, cyto_nucl 8.5,
pero 4.5, extr 3, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012048)
HIX0012048
HIT000021439
(
AK096584
)
(Conserved hypothetical protein.)
genome : 25,277,020 - 25,279,876 (2,857)
query : 1 - 2,857 (2,857/2,857)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 9.5, cyto_pero 8.83333, cyto_nucl 8.5,
pero 4.5, extr 3, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012048)
HIX0012048
HIT000015755
(
AK090888
)
(Conserved hypothetical protein.)
genome : 25,277,534 - 25,279,876 (2,343)
query : 1 - 2,343 (2,343/2,343)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.8333, mito 9, cyto 8, nucl 6.5,
cyto_pero 6.33333, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012048)
HIX0012048
HIT000019170
(
AK094315
)
(Hypothetical short protein.)
genome : 25,278,233 - 25,279,876 (1,644)
query : 1 - 1,644 (1,644/1,644)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012048)
HIX0012048
HIT000097521
(
BC043194
)
Representative transcript
(Hypothetical protein.)
genome : 25,278,511 - 25,281,634 (3,124)
query : 4 - 3,127 (3,124/3,142)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, extr 12, cyto_nucl 9.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012048)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB052199
Pongo
sp. (Orangutan) : CR860610
HIX0012048
HIT000026089
(
AL157455
)
(Conserved hypothetical protein.)
genome : 25,278,888 - 25,281,634 (2,747)
query : 1 - 2,748 (2,748/2,757)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 12, cyto_nucl 8.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012048)
HIX0012048
HIT000059847
(
AB061718
)
(Hypothetical protein.)
genome : 25,281,106 - 25,281,634 (529)
query : 1 - 530 (530/547)
1 exon
identity = 0.977
5'(0.977)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012048)
HIX0172651
HIT000320645_03 (
NR_001289
)
(Non-protein coding transcript.)
genome : 25,287,121 - 25,287,187 (67)
query : 1 - 67 (67/67)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172651)
HIX0172651
HIT000320651_03 (
NR_001295
)
(Non-protein coding transcript.)
genome : 25,287,121 - 25,287,187 (67)
query : 1 - 67 (67/67)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172651)
HIX0172651
HIT000556895_01 (
ENST00000458961
)
(Non-protein coding transcript.)
genome : 25,287,121 - 25,287,187 (67)
query : 1 - 67 (67/67)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172651)
HIX0172651
HIT000557062_01 (
ENST00000459128
)
(Non-protein coding transcript.)
genome : 25,287,121 - 25,287,187 (67)
query : 1 - 67 (67/67)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172651)
HIX0012047
HIT000663631 (
ENST00000549804
)
(Conserved hypothetical protein.)
genome : 25,295,779 - 25,367,623 (71,845)
query : 1 - 7,844 (7,844/7,844)
33 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 9, cyto_nucl 9, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000027670
(
AL832758
)
(Conserved hypothetical protein.)
genome : 25,295,779 - 25,365,040 (69,262)
query : 1 - 5,259 (5,259/5,277)
33 exons
identity = 0.998
5'(1.000;0.988;1.000;1.000;0.993;1.000;1.000;
0.992;0.993;0.993;1.000;1.000;1.000;1.000;
0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;0.991;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 9, cyto_nucl 9, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000661442 (
ENST00000547292
)
(Hypothetical protein.)
genome : 25,296,236 - 25,301,712 (5,477)
query : 1 - 626 (626/626)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 11, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0096432
HIT000398552 (
NR_003316
)
(Non-protein coding transcript.)
genome : 25,296,623 - 25,296,719 (97)
query : 1 - 97 (97/97)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096432)
HIX0096432
HIT000470338 (
ENST00000384335
)
(Non-protein coding transcript.)
genome : 25,296,624 - 25,296,718 (95)
query : 1 - 95 (95/95)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096432)
HIX0012047
HIT000079051
(
AF400486
)
(Conserved hypothetical protein.)
genome : 25,299,007 - 25,360,808 (61,802)
query : 7 - 4,705 (4,699/4,724)
32 exons
identity = 0.997
5'(0.972;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;0.993;0.993;1.000;
1.000;0.985;0.992;1.000;0.993;1.000;1.000;
0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.988;1.000;0.992)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9, cyto_nucl 9, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0096433
HIT000398553 (
NR_003317
)
(Hypothetical short protein.)
genome : 25,299,356 - 25,299,452 (97)
query : 1 - 97 (97/97)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096433)
HIX0096433
HIT000470281 (
ENST00000384274
)
(Hypothetical short protein.)
genome : 25,299,357 - 25,299,451 (95)
query : 1 - 95 (95/95)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096433)
HIX0012047
HIT000253198
(
AY362862
)
(Hypothetical short protein.)
genome : 25,301,703 - 25,307,160 (5,458)
query : 1 - 641 (641/641)
5 exons
identity = 0.998
5'(1.000;1.000;0.996;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 10, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0172664
HIT000398554_03 (
NR_003318
)
(Non-protein coding transcript.)
genome : 25,302,006 - 25,302,102 (97)
query : 1 - 97 (97/97)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172664)
HIX0172664
HIT000398560_03 (
NR_003324
)
(Non-protein coding transcript.)
genome : 25,302,006 - 25,302,102 (97)
query : 1 - 97 (97/97)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172664)
HIX0172664
HIT000470020_03 (
ENST00000384000
)
(Non-protein coding transcript.)
genome : 25,302,007 - 25,302,101 (95)
query : 1 - 95 (95/95)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172664)
HIX0172664
HIT000470294_03 (
ENST00000384287
)
(Non-protein coding transcript.)
genome : 25,302,007 - 25,302,101 (95)
query : 1 - 95 (95/95)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172664)
HIX0012047
HIT000398555 (
NR_003319
)
(Non-protein coding transcript.)
genome : 25,304,684 - 25,304,781 (98)
query : 1 - 98 (98/98)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000470721 (
ENST00000384733
)
(Non-protein coding transcript.)
genome : 25,304,685 - 25,304,780 (96)
query : 1 - 96 (96/96)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000265908
(
BC080646
)
(Conserved hypothetical protein.)
genome : 25,304,707 - 25,360,808 (56,102)
query : 1 - 4,328 (4,328/4,346)
30 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, nucl 5, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0172666
HIT000398556_03 (
NR_003320
)
(Non-protein coding transcript.)
genome : 25,307,479 - 25,307,575 (97)
query : 1 - 97 (97/97)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172666)
HIX0172666
HIT000398558_03 (
NR_003322
)
(Non-protein coding transcript.)
genome : 25,307,479 - 25,307,575 (97)
query : 1 - 97 (97/97)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172666)
HIX0172666
HIT000470403_03 (
ENST00000384404
)
(Non-protein coding transcript.)
genome : 25,307,480 - 25,307,574 (95)
query : 1 - 95 (95/95)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172666)
HIX0172666
HIT000470461_03 (
ENST00000384462
)
(Non-protein coding transcript.)
genome : 25,307,480 - 25,307,574 (95)
query : 1 - 95 (95/95)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172666)
HIX0012047
HIT000664745 (
ENST00000551077
)
(Hypothetical protein.)
genome : 25,309,918 - 25,319,198 (9,281)
query : 1 - 638 (638/638)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 8.5, cyto_nucl 8.33333, cyto 7,
cyto_pero 4.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0096434
HIT000398557 (
NR_003321
)
(Non-protein coding transcript.)
genome : 25,310,172 - 25,310,269 (98)
query : 1 - 98 (98/98)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096434)
HIX0096434
HIT000470701 (
ENST00000384711
)
(Non-protein coding transcript.)
genome : 25,310,173 - 25,310,268 (96)
query : 1 - 96 (96/96)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096434)
HIX0172667
HIT000398556_04 (
NR_003320
)
(Non-protein coding transcript.)
genome : 25,312,934 - 25,313,030 (97)
query : 1 - 97 (97/97)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172667)
HIX0172667
HIT000398558_04 (
NR_003322
)
(Non-protein coding transcript.)
genome : 25,312,934 - 25,313,030 (97)
query : 1 - 97 (97/97)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172667)
HIX0172667
HIT000470403_04 (
ENST00000384404
)
(Non-protein coding transcript.)
genome : 25,312,935 - 25,313,029 (95)
query : 1 - 95 (95/95)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172667)
HIX0172667
HIT000470461_04 (
ENST00000384462
)
(Non-protein coding transcript.)
genome : 25,312,935 - 25,313,029 (95)
query : 1 - 95 (95/95)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172667)
HIX0096435
HIT000398559 (
NR_003323
)
(Hypothetical short protein.)
genome : 25,315,578 - 25,315,674 (97)
query : 1 - 97 (97/97)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096435)
HIX0096435
HIT000470366 (
ENST00000384365
)
(Hypothetical short protein.)
genome : 25,315,579 - 25,315,673 (95)
query : 1 - 95 (95/95)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096435)
HIX0172665
HIT000398554_04 (
NR_003318
)
(Non-protein coding transcript.)
genome : 25,318,253 - 25,318,349 (97)
query : 1 - 97 (97/97)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172665)
HIX0172665
HIT000398560_04 (
NR_003324
)
(Non-protein coding transcript.)
genome : 25,318,253 - 25,318,349 (97)
query : 1 - 97 (97/97)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172665)
HIX0172665
HIT000470020_04 (
ENST00000384000
)
(Non-protein coding transcript.)
genome : 25,318,254 - 25,318,348 (95)
query : 1 - 95 (95/95)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172665)
HIX0172665
HIT000470294_04 (
ENST00000384287
)
(Non-protein coding transcript.)
genome : 25,318,254 - 25,318,348 (95)
query : 1 - 95 (95/95)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172665)
HIX0096436
HIT000398561 (
NR_003325
)
(Hypothetical short protein.)
genome : 25,319,260 - 25,319,363 (104)
query : 1 - 104 (104/104)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
This sequence is too short.
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096436)
HIX0096436
HIT000345404 (
ENST00000363791
)
(Hypothetical short protein.)
genome : 25,319,261 - 25,319,362 (102)
query : 1 - 102 (102/102)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096436)
HIX0096437
HIT000398562 (
NR_003326
)
(Hypothetical short protein.)
genome : 25,321,075 - 25,321,168 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096437)
HIX0096437
HIT000469905 (
ENST00000383882
)
(Hypothetical short protein.)
genome : 25,321,076 - 25,321,167 (92)
query : 1 - 92 (92/92)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096437)
HIX0012047
HIT000364303 (
ENST00000383025
)
(Conserved hypothetical protein.)
genome : 25,322,013 - 25,330,407 (8,395)
query : 1 - 713 (713/713)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 9, cyto_nucl 9, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000253199
(
AY362863
)
(Conserved hypothetical protein.)
genome : 25,322,013 - 25,328,606 (6,594)
query : 1 - 694 (694/694)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 11.5, nucl 11, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000254363
(
AY421730
)
(Conserved hypothetical protein.)
genome : 25,322,013 - 25,328,606 (6,594)
query : 1 - 574 (574/574)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9, cyto_nucl 8.5, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0096438
HIT000398563 (
NR_003327
)
(Hypothetical short protein.)
genome : 25,322,197 - 25,322,290 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096438)
HIX0096438
HIT000470467 (
ENST00000384468
)
(Hypothetical short protein.)
genome : 25,322,198 - 25,322,289 (92)
query : 1 - 92 (92/92)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096438)
HIX0096439
HIT000398564 (
NR_003328
)
(Hypothetical short protein.)
genome : 25,324,204 - 25,324,297 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096439)
HIX0096439
HIT000470407 (
ENST00000384408
)
(Hypothetical short protein.)
genome : 25,324,205 - 25,324,296 (92)
query : 1 - 92 (92/92)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096439)
HIX0096440
HIT000398565 (
NR_003329
)
(Hypothetical short protein.)
genome : 25,325,288 - 25,325,381 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096440)
HIX0096440
HIT000469917 (
ENST00000383894
)
(Hypothetical short protein.)
genome : 25,325,289 - 25,325,380 (92)
query : 1 - 92 (92/92)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096440)
HIX0012047
HIT000057435
(
BX648788
)
(Conserved hypothetical protein.)
genome : 25,326,301 - 25,359,069 (32,769)
query : 1 - 8,932 (8,932/8,949)
16 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.992;1.000;1.000;
0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 9, cyto_nucl 9, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000660900 (
ENST00000546682
)
(Conserved hypothetical protein.)
genome : 25,326,301 - 25,359,074 (32,774)
query : 1 - 8,842 (8,842/8,842)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 9, cyto_nucl 9, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0096441
HIT000398566 (
NR_003330
)
(Hypothetical short protein.)
genome : 25,326,433 - 25,326,526 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096441)
HIX0096441
HIT000470444 (
ENST00000384445
)
(Hypothetical short protein.)
genome : 25,326,434 - 25,326,525 (92)
query : 1 - 92 (92/92)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096441)
HIX0096442
HIT000398567 (
NR_003331
)
(Hypothetical short protein.)
genome : 25,327,914 - 25,328,007 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096442)
HIX0096442
HIT000470530 (
ENST00000384533
)
(Hypothetical short protein.)
genome : 25,327,915 - 25,328,006 (92)
query : 1 - 92 (92/92)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096442)
HIX0012047
HIT000079052
(
AF400487
)
(Hypothetical short protein.)
genome : 25,328,605 - 25,365,500 (36,896)
query : 1 - 4,472 (4,472/4,489)
23 exons
identity = 0.996
5'(1.000;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;0.988)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 7, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0172653
HIT000320646_04 (
NR_001290
)
(Hypothetical short protein.)
genome : 25,328,734 - 25,328,827 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172653)
HIX0172653
HIT000398568_03 (
NR_003332
)
(Hypothetical short protein.)
genome : 25,328,734 - 25,328,827 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172653)
HIX0172653
HIT000469951_03 (
ENST00000383929
)
(Hypothetical short protein.)
genome : 25,328,735 - 25,328,826 (92)
query : 1 - 92 (92/92)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172653)
HIX0172653
HIT000470718_03 (
ENST00000384729
)
(Hypothetical short protein.)
genome : 25,328,735 - 25,328,826 (92)
query : 1 - 92 (92/92)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172653)
HIX0012047
HIT000088929
(
BC016168
)
(Hypothetical protein.)
genome : 25,330,418 - 25,355,600 (25,183)
query : 1 - 2,206 (2,206/2,225)
17 exons
identity = 1.000
5'(1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 8.5, nucl 7, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000666511 (
ENST00000553108
)
(Hypothetical protein.)
genome : 25,330,418 - 25,355,602 (25,185)
query : 1 - 2,208 (2,208/2,208)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 8.5, nucl 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0096363
HIT000398569 (
NR_003333
)
(Hypothetical short protein.)
genome : 25,330,531 - 25,330,624 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096363)
HIX0096363
HIT000469982 (
ENST00000383961
)
(Hypothetical short protein.)
genome : 25,330,532 - 25,330,623 (92)
query : 1 - 92 (92/92)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096363)
HIX0012047
HIT000320646_05 (
NR_001290
)
(Hypothetical short protein.)
genome : 25,331,673 - 25,331,766 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000398568_04 (
NR_003332
)
(Hypothetical short protein.)
genome : 25,331,673 - 25,331,766 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000469951_04 (
ENST00000383929
)
(Hypothetical short protein.)
genome : 25,331,674 - 25,331,765 (92)
query : 1 - 92 (92/92)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000470718_04 (
ENST00000384729
)
(Hypothetical short protein.)
genome : 25,331,674 - 25,331,765 (92)
query : 1 - 92 (92/92)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0038089
HIT000074825
(
AF241255
)
Representative transcript
(Hypothetical short protein.)
genome : 25,332,808 - 25,334,043 (1,236)
query : 1 - 1,236 (1,236/1,255)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 9.5, cyto_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038089)
HIX0222791
HIT000680534 (
ENST00000567527
)
(Hypothetical protein.)
genome : 25,332,808 - 25,334,043 (1,236)
query : 1 - 1,236 (1,236/1,236)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 8.5, cyto_pero 7, mito 6, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222791)
HIX0038089
HIT000398570 (
NR_003334
)
(Hypothetical short protein.)
genome : 25,332,808 - 25,332,901 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038089)
HIX0038089
HIT000470526 (
ENST00000384529
)
(Hypothetical short protein.)
genome : 25,332,809 - 25,332,900 (92)
query : 1 - 92 (92/92)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038089)
HIX0038089
HIT000398571 (
NR_003335
)
(Hypothetical short protein.)
genome : 25,333,950 - 25,334,043 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038089)
HIX0038089
HIT000470505 (
ENST00000384507
)
(Hypothetical short protein.)
genome : 25,333,951 - 25,334,042 (92)
query : 1 - 92 (92/92)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038089)
HIX0012047
HIT000398572 (
NR_003336
)
(Hypothetical short protein.)
genome : 25,335,069 - 25,335,162 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000470429 (
ENST00000384430
)
(Hypothetical short protein.)
genome : 25,335,070 - 25,335,161 (92)
query : 1 - 92 (92/92)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0096443
HIT000398573 (
NR_003337
)
(Hypothetical short protein.)
genome : 25,336,932 - 25,337,025 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096443)
HIX0096443
HIT000470640 (
ENST00000384645
)
(Hypothetical short protein.)
genome : 25,336,933 - 25,337,024 (92)
query : 1 - 92 (92/92)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096443)
HIX0038145
HIT000263249
(
BC069077
)
Representative transcript
(Hypothetical protein.)
genome : 25,337,107 - 25,337,524 (418)
query : 1 - 418 (418/418)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 11, cyto 3.5, cyto_nucl 3.5, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038145)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000007403
Pan
sp. (Chimpanzee) : ENSPTRT00000012605
HIX0038145
HIT000263262
(
BC069090
)
(Hypothetical protein.)
genome : 25,337,107 - 25,337,524 (418)
query : 1 - 418 (418/418)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 11, cyto 3.5, cyto_nucl 3.5, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038145)
HIX0038145
HIT000263451
(
BC069299
)
(Hypothetical protein.)
genome : 25,337,108 - 25,337,524 (417)
query : 1 - 417 (417/417)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 11, cyto 3.5, cyto_nucl 3.5, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038145)
HIX0096444
HIT000398574 (
NR_003338
)
(Hypothetical short protein.)
genome : 25,339,183 - 25,339,276 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096444)
HIX0096444
HIT000470546 (
ENST00000384549
)
(Hypothetical short protein.)
genome : 25,339,184 - 25,339,275 (92)
query : 1 - 92 (92/92)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096444)
HIX0012047
HIT000079053
(
AF400488
)
(Hypothetical short protein.)
genome : 25,340,608 - 25,364,501 (23,894)
query : 1 - 2,892 (2,892/2,892)
17 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.986;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 7, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0096445
HIT000398575 (
NR_003339
)
(Non-protein coding transcript.)
genome : 25,342,809 - 25,342,902 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096445)
HIX0096445
HIT000615920 (
ENST00000516517
)
(Non-protein coding transcript.)
genome : 25,342,810 - 25,342,901 (92)
query : 1 - 92 (92/92)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096445)
HIX0096446
HIT000398576 (
NR_003340
)
(Non-protein coding transcript.)
genome : 25,344,645 - 25,344,742 (98)
query : 1 - 98 (98/98)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096446)
HIX0096446
HIT000615409 (
ENST00000516006
)
(Non-protein coding transcript.)
genome : 25,344,646 - 25,344,741 (96)
query : 1 - 96 (96/96)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096446)
HIX0096447
HIT000398577 (
NR_003341
)
(Non-protein coding transcript.)
genome : 25,346,721 - 25,346,814 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096447)
HIX0096447
HIT000615490 (
ENST00000516087
)
(Non-protein coding transcript.)
genome : 25,346,722 - 25,346,813 (92)
query : 1 - 92 (92/92)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096447)
HIX0012047
HIT000398597 (
NR_003361
)
(Non-protein coding transcript.)
genome : 25,349,788 - 25,349,880 (93)
query : 1 - 93 (93/93)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000615526 (
ENST00000516123
)
(Non-protein coding transcript.)
genome : 25,349,789 - 25,349,879 (91)
query : 1 - 91 (91/91)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0096462
HIT000398596 (
NR_003360
)
(Non-protein coding transcript.)
genome : 25,351,667 - 25,351,751 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096462)
HIX0096462
HIT000470514 (
ENST00000384516
)
(Non-protein coding transcript.)
genome : 25,351,668 - 25,351,750 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096462)
HIX0211941
HIT000615871 (
ENST00000516468
)
(Non-protein coding transcript.)
genome : 25,353,415 - 25,353,499 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211941)
HIX0012047
HIT000562257 (
NR_023915
)
(Conserved hypothetical protein.)
genome : 25,361,692 - 25,367,623 (5,932)
query : 1 - 4,498 (4,498/4,498)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000218106
(
U12897
)
(Hypothetical short protein.)
genome : 25,361,692 - 25,365,198 (3,507)
query : 1 - 2,074 (2,074/2,075)
3 exons
identity = 0.998
5'(0.997;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 4.5, nucl 3, cyto_pero 3, mito 2,
golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000079054
(
AF400489
)
(Hypothetical short protein.)
genome : 25,362,619 - 25,420,017 (57,399)
query : 1 - 569 (569/569)
7 exons
identity = 0.991
5'(1.000;1.000;0.969;1.000;0.992;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 5.5, cyto_nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000666548 (
ENST00000553149
)
(Hypothetical short protein.)
genome : 25,362,619 - 25,418,143 (55,525)
query : 1 - 513 (513/513)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 5.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000079055
(
AF400490
)
(Hypothetical short protein.)
genome : 25,364,212 - 25,420,017 (55,806)
query : 1 - 752 (752/752)
8 exons
identity = 0.993
5'(1.000;1.000;0.969;1.000;0.992;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 4.5, cyto_nucl 3.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000663187 (
ENST00000549301
)
(Hypothetical short protein.)
genome : 25,364,212 - 25,420,017 (55,806)
query : 1 - 752 (752/752)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 4.5, cyto_nucl 3.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0038196
HIT000062482
(
AF019616
)
Representative transcript
(Conserved hypothetical protein.)
genome : 25,380,789 - 25,383,200 (2,412)
query : 3 - 2,416 (2,414/2,418)
1 exon
identity = 0.992
5'(0.992)3'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, mito 9, cyto_nucl 6.83333, nucl 5.5, cyto 5,
extr_plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038196)
HIX0038196
HIT000486557 (
NR_022009
)
(Conserved hypothetical protein.)
genome : 25,380,789 - 25,383,200 (2,412)
query : 1 - 2,412 (2,412/2,412)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, mito 9, cyto_nucl 6.83333, nucl 5.5, cyto 5,
extr_plas 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038196)
HIX0133608
HIT000458335
(
DQ591804
)
Representative transcript
(Non-protein coding transcript.)
genome : 25,389,889 - 25,389,918 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0133608)
HIX0134125
HIT000474653 (
ENST00000391126
)
(Non-protein coding transcript.)
genome : 25,404,368 - 25,404,426 (59)
query : 1 - 59 (59/59)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0134125)
HIX0038509
HIT000320647_04 (
NR_001291
)
(Non-protein coding transcript.)
genome : 25,415,870 - 25,415,951 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038509)
HIX0038509
HIT000346556 (
ENST00000364961
)
(Non-protein coding transcript.)
genome : 25,415,870 - 25,415,951 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038509)
HIX0096419
HIT000344466 (
ENST00000362842
)
(Non-protein coding transcript.)
genome : 25,417,782 - 25,417,863 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096419)
HIX0096419
HIT000398530 (
NR_003294
)
(Non-protein coding transcript.)
genome : 25,417,782 - 25,417,863 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096419)
HIX0012047
HIT000079056
(
AF400491
)
(Hypothetical short protein.)
genome : 25,418,126 - 25,427,198 (9,073)
query : 1 - 608 (608/608)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 13, cyto 7, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000539526 (
ENST00000441592
)
(Hypothetical short protein.)
genome : 25,418,126 - 25,427,198 (9,073)
query : 1 - 608 (608/608)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 13, cyto 7, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0096420
HIT000344723 (
ENST00000363100
)
(Non-protein coding transcript.)
genome : 25,420,074 - 25,420,155 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096420)
HIX0096420
HIT000398531 (
NR_003295
)
(Non-protein coding transcript.)
genome : 25,420,074 - 25,420,155 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096420)
HIX0096421
HIT000345422 (
ENST00000363810
)
(Non-protein coding transcript.)
genome : 25,421,979 - 25,422,060 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096421)
HIX0096421
HIT000398532 (
NR_003296
)
(Non-protein coding transcript.)
genome : 25,421,979 - 25,422,060 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096421)
HIX0096422
HIT000345247 (
ENST00000363633
)
(Non-protein coding transcript.)
genome : 25,423,885 - 25,423,966 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096422)
HIX0096422
HIT000398533 (
NR_003297
)
(Non-protein coding transcript.)
genome : 25,423,885 - 25,423,966 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096422)
HIX0012047
HIT000079057
(
AF400492
)
(Hypothetical short protein.)
genome : 25,425,461 - 25,427,855 (2,395)
query : 1 - 812 (812/812)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000545845 (
ENST00000447911
)
(Hypothetical short protein.)
genome : 25,425,461 - 25,427,855 (2,395)
query : 1 - 812 (812/812)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0096423
HIT000345553 (
ENST00000363942
)
(Non-protein coding transcript.)
genome : 25,425,644 - 25,425,725 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096423)
HIX0096423
HIT000398534 (
NR_003298
)
(Non-protein coding transcript.)
genome : 25,425,644 - 25,425,725 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096423)
HIX0012047
HIT000522142 (
ENST00000424208
)
(Conserved hypothetical protein.)
genome : 25,426,990 - 25,467,432 (40,443)
query : 1 - 3,166 (3,166/3,166)
34 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 10.5, cyto_nucl 10, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000253200
(
AY362864
)
(Hypothetical protein.)
genome : 25,426,990 - 25,430,705 (3,716)
query : 1 - 566 (566/566)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, cyto 11.5, nucl 9.5, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000346896 (
ENST00000365306
)
(Non-protein coding transcript.)
genome : 25,427,532 - 25,427,613 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000398535 (
NR_003299
)
(Non-protein coding transcript.)
genome : 25,427,532 - 25,427,613 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000079058
(
AF400493
)
(Hypothetical short protein.)
genome : 25,427,872 - 25,431,154 (3,283)
query : 1 - 345 (345/345)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0096424
HIT000345467 (
ENST00000363856
)
(Non-protein coding transcript.)
genome : 25,429,453 - 25,429,534 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096424)
HIX0096424
HIT000398536 (
NR_003300
)
(Non-protein coding transcript.)
genome : 25,429,453 - 25,429,534 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096424)
HIX0012047
HIT000079059
(
AF400494
)
(Non-protein coding transcript.)
genome : 25,430,604 - 25,434,472 (3,869)
query : 1 - 444 (444/444)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0172655
HIT000344210_05 (
ENST00000362583
)
(Non-protein coding transcript.)
genome : 25,430,778 - 25,430,859 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172655)
HIX0172655
HIT000344536_05 (
ENST00000362912
)
(Non-protein coding transcript.)
genome : 25,430,778 - 25,430,859 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172655)
HIX0172655
HIT000398537_03 (
NR_003301
)
(Non-protein coding transcript.)
genome : 25,430,778 - 25,430,859 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172655)
HIX0172655
HIT000398540_03 (
NR_003304
)
(Non-protein coding transcript.)
genome : 25,430,778 - 25,430,859 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172655)
HIX0096425
HIT000346667 (
ENST00000365073
)
(Non-protein coding transcript.)
genome : 25,432,683 - 25,432,763 (81)
query : 1 - 81 (81/81)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096425)
HIX0096425
HIT000398538 (
NR_003302
)
(Non-protein coding transcript.)
genome : 25,432,683 - 25,432,763 (81)
query : 1 - 81 (81/81)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096425)
HIX0012047
HIT000079060
(
AF400495
)
(Hypothetical short protein.)
genome : 25,434,450 - 25,438,636 (4,187)
query : 1 - 610 (610/610)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000512109 (
ENST00000414175
)
(Hypothetical short protein.)
genome : 25,434,450 - 25,438,636 (4,187)
query : 1 - 610 (610/610)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0172657
HIT000344458_09 (
ENST00000362834
)
(Non-protein coding transcript.)
genome : 25,434,561 - 25,434,642 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172657)
HIX0172657
HIT000345231_09 (
ENST00000363616
)
(Non-protein coding transcript.)
genome : 25,434,561 - 25,434,642 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172657)
HIX0172657
HIT000347091_09 (
ENST00000365503
)
(Non-protein coding transcript.)
genome : 25,434,561 - 25,434,642 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172657)
HIX0172657
HIT000347215_09 (
ENST00000365629
)
(Non-protein coding transcript.)
genome : 25,434,561 - 25,434,642 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172657)
HIX0172657
HIT000398539_05 (
NR_003303
)
(Non-protein coding transcript.)
genome : 25,434,561 - 25,434,642 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172657)
HIX0172657
HIT000398580_05 (
NR_003344
)
(Non-protein coding transcript.)
genome : 25,434,561 - 25,434,642 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172657)
HIX0172657
HIT000398587_05 (
NR_003351
)
(Non-protein coding transcript.)
genome : 25,434,561 - 25,434,642 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172657)
HIX0172657
HIT000398594_05 (
NR_003358
)
(Non-protein coding transcript.)
genome : 25,434,561 - 25,434,642 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172657)
HIX0012047
HIT000253201
(
AY362865
)
(Hypothetical short protein.)
genome : 25,436,446 - 25,442,601 (6,156)
query : 1 - 537 (537/537)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0172656
HIT000344210_06 (
ENST00000362583
)
(Non-protein coding transcript.)
genome : 25,436,563 - 25,436,644 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172656)
HIX0172656
HIT000344536_06 (
ENST00000362912
)
(Non-protein coding transcript.)
genome : 25,436,563 - 25,436,644 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172656)
HIX0172656
HIT000398537_04 (
NR_003301
)
(Non-protein coding transcript.)
genome : 25,436,563 - 25,436,644 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172656)
HIX0172656
HIT000398540_04 (
NR_003304
)
(Non-protein coding transcript.)
genome : 25,436,563 - 25,436,644 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172656)
HIX0012047
HIT000079061
(
AF400496
)
(Hypothetical short protein.)
genome : 25,438,460 - 25,442,649 (4,190)
query : 1 - 544 (544/544)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000554510 (
ENST00000456576
)
(Hypothetical short protein.)
genome : 25,438,460 - 25,442,649 (4,190)
query : 1 - 544 (544/544)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000344978 (
ENST00000363358
)
(Non-protein coding transcript.)
genome : 25,438,468 - 25,438,549 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000398541 (
NR_003305
)
(Non-protein coding transcript.)
genome : 25,438,468 - 25,438,549 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0096426
HIT000344713 (
ENST00000363090
)
(Non-protein coding transcript.)
genome : 25,440,068 - 25,440,148 (81)
query : 1 - 81 (81/81)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096426)
HIX0096426
HIT000398542 (
NR_003306
)
(Non-protein coding transcript.)
genome : 25,440,068 - 25,440,148 (81)
query : 1 - 81 (81/81)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096426)
HIX0012047
HIT000079062
(
AF400497
)
(Conserved hypothetical protein.)
genome : 25,442,575 - 25,459,165 (16,591)
query : 1 - 2,098 (2,098/2,098)
16 exons
identity = 0.998
5'(1.000;1.000;0.977;1.000;1.000;1.000;0.985;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 6, cyto 5, cyto_nucl 4.83333,
mito_nucl 4.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000079063
(
AF400498
)
(Hypothetical protein.)
genome : 25,442,575 - 25,459,165 (16,591)
query : 1 - 1,190 (1,190/1,190)
14 exons
identity = 0.996
5'(1.000;1.000;0.977;1.000;1.000;1.000;0.985;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 6, cyto 5, cyto_nucl 4.83333,
mito_nucl 4.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000522267 (
ENST00000424333
)
(Conserved hypothetical protein.)
genome : 25,442,575 - 25,459,165 (16,591)
query : 1 - 2,097 (2,097/2,097)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 7, cyto 5, cyto_nucl 4.83333, nucl 3.5,
E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0096427
HIT000346405 (
ENST00000364809
)
(Non-protein coding transcript.)
genome : 25,442,723 - 25,442,803 (81)
query : 1 - 81 (81/81)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096427)
HIX0096427
HIT000398543 (
NR_003307
)
(Non-protein coding transcript.)
genome : 25,442,723 - 25,442,803 (81)
query : 1 - 81 (81/81)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096427)
HIX0096428
HIT000345498 (
ENST00000363887
)
(Non-protein coding transcript.)
genome : 25,444,595 - 25,444,676 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096428)
HIX0096428
HIT000398544 (
NR_003308
)
(Non-protein coding transcript.)
genome : 25,444,595 - 25,444,676 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096428)
HIX0172661
HIT000344721_07 (
ENST00000363098
)
(Non-protein coding transcript.)
genome : 25,446,470 - 25,446,551 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172661)
HIX0172661
HIT000344914_07 (
ENST00000363293
)
(Non-protein coding transcript.)
genome : 25,446,470 - 25,446,551 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172661)
HIX0172661
HIT000346214_07 (
ENST00000364612
)
(Non-protein coding transcript.)
genome : 25,446,470 - 25,446,551 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172661)
HIX0172661
HIT000398545_04 (
NR_003309
)
(Non-protein coding transcript.)
genome : 25,446,470 - 25,446,551 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172661)
HIX0172661
HIT000398546_04 (
NR_003310
)
(Non-protein coding transcript.)
genome : 25,446,470 - 25,446,551 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172661)
HIX0172661
HIT000398547_04 (
NR_003311
)
(Non-protein coding transcript.)
genome : 25,446,470 - 25,446,551 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172661)
HIX0172662
HIT000344721_08 (
ENST00000363098
)
(Non-protein coding transcript.)
genome : 25,448,374 - 25,448,455 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172662)
HIX0172662
HIT000344914_08 (
ENST00000363293
)
(Non-protein coding transcript.)
genome : 25,448,374 - 25,448,455 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172662)
HIX0172662
HIT000346214_08 (
ENST00000364612
)
(Non-protein coding transcript.)
genome : 25,448,374 - 25,448,455 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172662)
HIX0172662
HIT000398545_05 (
NR_003309
)
(Non-protein coding transcript.)
genome : 25,448,374 - 25,448,455 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172662)
HIX0172662
HIT000398546_05 (
NR_003310
)
(Non-protein coding transcript.)
genome : 25,448,374 - 25,448,455 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172662)
HIX0172662
HIT000398547_05 (
NR_003311
)
(Non-protein coding transcript.)
genome : 25,448,374 - 25,448,455 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172662)
HIX0172663
HIT000344721_09 (
ENST00000363098
)
(Non-protein coding transcript.)
genome : 25,449,504 - 25,449,585 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172663)
HIX0172663
HIT000344914_09 (
ENST00000363293
)
(Non-protein coding transcript.)
genome : 25,449,504 - 25,449,585 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172663)
HIX0172663
HIT000346214_09 (
ENST00000364612
)
(Non-protein coding transcript.)
genome : 25,449,504 - 25,449,585 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172663)
HIX0172663
HIT000398545_06 (
NR_003309
)
(Non-protein coding transcript.)
genome : 25,449,504 - 25,449,585 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172663)
HIX0172663
HIT000398546_06 (
NR_003310
)
(Non-protein coding transcript.)
genome : 25,449,504 - 25,449,585 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172663)
HIX0172663
HIT000398547_06 (
NR_003311
)
(Non-protein coding transcript.)
genome : 25,449,504 - 25,449,585 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172663)
HIX0012047
HIT000253202
(
AY362866
)
(Hypothetical short protein.)
genome : 25,451,227 - 25,458,676 (7,450)
query : 1 - 676 (676/676)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;0.992;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 7, cyto_nucl 6, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000548743 (
ENST00000450809
)
(Hypothetical short protein.)
genome : 25,451,227 - 25,458,676 (7,450)
query : 1 - 677 (677/677)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 10, nucl 9, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0096429
HIT000346693 (
ENST00000365099
)
(Non-protein coding transcript.)
genome : 25,451,409 - 25,451,490 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096429)
HIX0096429
HIT000398548 (
NR_003312
)
(Non-protein coding transcript.)
genome : 25,451,409 - 25,451,490 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096429)
HIX0096430
HIT000344587 (
ENST00000362963
)
(Non-protein coding transcript.)
genome : 25,453,230 - 25,453,310 (81)
query : 1 - 81 (81/81)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096430)
HIX0096430
HIT000398549 (
NR_003313
)
(Non-protein coding transcript.)
genome : 25,453,230 - 25,453,310 (81)
query : 1 - 81 (81/81)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096430)
HIX0096431
HIT000346062 (
ENST00000364456
)
(Non-protein coding transcript.)
genome : 25,455,065 - 25,455,146 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096431)
HIX0096431
HIT000398550 (
NR_003314
)
(Non-protein coding transcript.)
genome : 25,455,065 - 25,455,146 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096431)
HIX0012047
HIT000062483
(
AF019617
)
(Hypothetical short protein.)
genome : 25,456,836 - 25,457,180 (345)
query : 2 - 343 (342/343)
1 exon
identity = 0.983
5'(0.983)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000486558 (
NR_022010
)
(Hypothetical short protein.)
genome : 25,456,839 - 25,457,180 (342)
query : 1 - 342 (342/342)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000346067 (
ENST00000364461
)
(Non-protein coding transcript.)
genome : 25,456,943 - 25,457,024 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000398551 (
NR_003315
)
(Non-protein coding transcript.)
genome : 25,456,943 - 25,457,024 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000079064
(
AF400499
)
(Hypothetical short protein.)
genome : 25,458,681 - 25,467,432 (8,752)
query : 1 - 529 (529/529)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0096464
HIT000345144 (
ENST00000363528
)
(Non-protein coding transcript.)
genome : 25,458,795 - 25,458,876 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096464)
HIX0096464
HIT000398607 (
NR_003495
)
(Non-protein coding transcript.)
genome : 25,458,806 - 25,458,876 (71)
query : 1 - 71 (71/71)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096464)
HIX0096448
HIT000344246 (
ENST00000362619
)
(Non-protein coding transcript.)
genome : 25,460,688 - 25,460,769 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096448)
HIX0096448
HIT000398578 (
NR_003342
)
(Non-protein coding transcript.)
genome : 25,460,688 - 25,460,769 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096448)
HIX0012047
HIT000079066
(
AF400501
)
Representative transcript
(PDZ and LIM domain protein 5 isoform i.)
genome : 25,463,499 - 25,620,623 (157,125)
query : 1 - 6,087 (6,087/6,087)
39 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.978;0.956;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.978;1.000;
1.000;0.977;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 12.5, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000551016 (
ENST00000453082
)
(Conserved hypothetical protein.)
genome : 25,463,499 - 25,492,435 (28,937)
query : 1 - 2,896 (2,896/2,896)
26 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.978;0.956;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 7.66667, cyto 6.5, nucl 5.5,
cyto_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000346661 (
ENST00000365067
)
(Non-protein coding transcript.)
genome : 25,463,764 - 25,463,845 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000398579 (
NR_003343
)
(Non-protein coding transcript.)
genome : 25,463,764 - 25,463,845 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0096465
HIT000346036 (
ENST00000364430
)
(Non-protein coding transcript.)
genome : 25,465,644 - 25,465,725 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096465)
HIX0096465
HIT000398608 (
NR_003496
)
(Non-protein coding transcript.)
genome : 25,465,650 - 25,465,725 (76)
query : 1 - 76 (76/76)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096465)
HIX0096466
HIT000345542 (
ENST00000363931
)
(Non-protein coding transcript.)
genome : 25,467,495 - 25,467,575 (81)
query : 1 - 81 (81/81)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096466)
HIX0096466
HIT000398609 (
NR_003497
)
(Non-protein coding transcript.)
genome : 25,467,501 - 25,467,574 (74)
query : 1 - 74 (74/74)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096466)
HIX0172658
HIT000344458_10 (
ENST00000362834
)
(Non-protein coding transcript.)
genome : 25,468,393 - 25,468,474 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172658)
HIX0172658
HIT000345231_10 (
ENST00000363616
)
(Non-protein coding transcript.)
genome : 25,468,393 - 25,468,474 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172658)
HIX0172658
HIT000347091_10 (
ENST00000365503
)
(Non-protein coding transcript.)
genome : 25,468,393 - 25,468,474 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172658)
HIX0172658
HIT000347215_10 (
ENST00000365629
)
(Non-protein coding transcript.)
genome : 25,468,393 - 25,468,474 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172658)
HIX0172658
HIT000398539_06 (
NR_003303
)
(Non-protein coding transcript.)
genome : 25,468,393 - 25,468,474 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172658)
HIX0172658
HIT000398580_06 (
NR_003344
)
(Non-protein coding transcript.)
genome : 25,468,393 - 25,468,474 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172658)
HIX0172658
HIT000398587_06 (
NR_003351
)
(Non-protein coding transcript.)
genome : 25,468,393 - 25,468,474 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172658)
HIX0172658
HIT000398594_06 (
NR_003358
)
(Non-protein coding transcript.)
genome : 25,468,393 - 25,468,474 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172658)
HIX0096449
HIT000345726 (
ENST00000364117
)
(Non-protein coding transcript.)
genome : 25,470,350 - 25,470,431 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096449)
HIX0096449
HIT000398581 (
NR_003345
)
(Non-protein coding transcript.)
genome : 25,470,350 - 25,470,431 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096449)
HIX0096450
HIT000346907 (
ENST00000365318
)
(Non-protein coding transcript.)
genome : 25,472,256 - 25,472,337 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096450)
HIX0096450
HIT000398582 (
NR_003346
)
(Non-protein coding transcript.)
genome : 25,472,256 - 25,472,337 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096450)
HIX0096451
HIT000345689 (
ENST00000364079
)
(Non-protein coding transcript.)
genome : 25,474,114 - 25,474,195 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096451)
HIX0096451
HIT000398583 (
NR_003347
)
(Non-protein coding transcript.)
genome : 25,474,114 - 25,474,195 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096451)
HIX0096452
HIT000345336 (
ENST00000363723
)
(Non-protein coding transcript.)
genome : 25,475,985 - 25,476,066 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096452)
HIX0096452
HIT000398584 (
NR_003348
)
(Non-protein coding transcript.)
genome : 25,475,985 - 25,476,066 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096452)
HIX0096453
HIT000344070 (
ENST00000362441
)
(Non-protein coding transcript.)
genome : 25,477,534 - 25,477,615 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096453)
HIX0096453
HIT000398585 (
NR_003349
)
(Non-protein coding transcript.)
genome : 25,477,534 - 25,477,615 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096453)
HIX0096454
HIT000346715 (
ENST00000365122
)
(Non-protein coding transcript.)
genome : 25,479,394 - 25,479,475 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096454)
HIX0096454
HIT000398586 (
NR_003350
)
(Non-protein coding transcript.)
genome : 25,479,394 - 25,479,475 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096454)
HIX0172659
HIT000344458_11 (
ENST00000362834
)
(Non-protein coding transcript.)
genome : 25,481,232 - 25,481,313 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172659)
HIX0172659
HIT000345231_11 (
ENST00000363616
)
(Non-protein coding transcript.)
genome : 25,481,232 - 25,481,313 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172659)
HIX0172659
HIT000347091_11 (
ENST00000365503
)
(Non-protein coding transcript.)
genome : 25,481,232 - 25,481,313 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172659)
HIX0172659
HIT000347215_11 (
ENST00000365629
)
(Non-protein coding transcript.)
genome : 25,481,232 - 25,481,313 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172659)
HIX0172659
HIT000398539_07 (
NR_003303
)
(Non-protein coding transcript.)
genome : 25,481,232 - 25,481,313 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172659)
HIX0172659
HIT000398580_07 (
NR_003344
)
(Non-protein coding transcript.)
genome : 25,481,232 - 25,481,313 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172659)
HIX0172659
HIT000398587_07 (
NR_003351
)
(Non-protein coding transcript.)
genome : 25,481,232 - 25,481,313 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172659)
HIX0172659
HIT000398594_07 (
NR_003358
)
(Non-protein coding transcript.)
genome : 25,481,232 - 25,481,313 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172659)
HIX0096455
HIT000345381 (
ENST00000363768
)
(Non-protein coding transcript.)
genome : 25,483,133 - 25,483,214 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096455)
HIX0096455
HIT000398588 (
NR_003352
)
(Non-protein coding transcript.)
genome : 25,483,133 - 25,483,214 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096455)
HIX0096456
HIT000346632 (
ENST00000365037
)
(Non-protein coding transcript.)
genome : 25,484,985 - 25,485,066 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096456)
HIX0096456
HIT000398589 (
NR_003353
)
(Non-protein coding transcript.)
genome : 25,484,985 - 25,485,066 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096456)
HIX0096457
HIT000345308 (
ENST00000363694
)
(Non-protein coding transcript.)
genome : 25,486,893 - 25,486,974 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096457)
HIX0096457
HIT000398590 (
NR_003354
)
(Non-protein coding transcript.)
genome : 25,486,893 - 25,486,974 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096457)
HIX0096458
HIT000344294 (
ENST00000362667
)
(Non-protein coding transcript.)
genome : 25,488,761 - 25,488,842 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096458)
HIX0096458
HIT000398591 (
NR_003355
)
(Non-protein coding transcript.)
genome : 25,488,761 - 25,488,842 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096458)
HIX0096459
HIT000345223 (
ENST00000363608
)
(Non-protein coding transcript.)
genome : 25,490,625 - 25,490,706 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096459)
HIX0096459
HIT000398592 (
NR_003356
)
(Non-protein coding transcript.)
genome : 25,490,625 - 25,490,706 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096459)
HIX0096460
HIT000345880 (
ENST00000364273
)
(Non-protein coding transcript.)
genome : 25,492,492 - 25,492,573 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096460)
HIX0096460
HIT000398593 (
NR_003357
)
(Non-protein coding transcript.)
genome : 25,492,492 - 25,492,573 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096460)
HIX0172660
HIT000344458_12 (
ENST00000362834
)
(Non-protein coding transcript.)
genome : 25,494,345 - 25,494,426 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172660)
HIX0172660
HIT000345231_12 (
ENST00000363616
)
(Non-protein coding transcript.)
genome : 25,494,345 - 25,494,426 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172660)
HIX0172660
HIT000347091_12 (
ENST00000365503
)
(Non-protein coding transcript.)
genome : 25,494,345 - 25,494,426 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172660)
HIX0172660
HIT000347215_12 (
ENST00000365629
)
(Non-protein coding transcript.)
genome : 25,494,345 - 25,494,426 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172660)
HIX0172660
HIT000398539_08 (
NR_003303
)
(Non-protein coding transcript.)
genome : 25,494,345 - 25,494,426 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172660)
HIX0172660
HIT000398580_08 (
NR_003344
)
(Non-protein coding transcript.)
genome : 25,494,345 - 25,494,426 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172660)
HIX0172660
HIT000398587_08 (
NR_003351
)
(Non-protein coding transcript.)
genome : 25,494,345 - 25,494,426 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172660)
HIX0172660
HIT000398594_08 (
NR_003358
)
(Non-protein coding transcript.)
genome : 25,494,345 - 25,494,426 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172660)
HIX0096461
HIT000346979 (
ENST00000365391
)
(Non-protein coding transcript.)
genome : 25,496,006 - 25,496,087 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096461)
HIX0096461
HIT000398595 (
NR_003359
)
(Non-protein coding transcript.)
genome : 25,496,006 - 25,496,087 (82)
query : 1 - 82 (82/82)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096461)
HIX0012047
HIT000550665 (
ENST00000452731
)
(Conserved hypothetical protein.)
genome : 25,497,372 - 25,583,343 (85,972)
query : 1 - 1,064 (1,064/1,064)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 12.5, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0018530
HIT000005325
(
AK022051
)
Representative transcript
(Hypothetical short protein.)
genome : 25,500,726 - 25,502,174 (1,449)
query : 1 - 1,449 (1,449/1,449)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018530)
HIX0096467
HIT000474605 (
ENST00000391078
)
(Non-protein coding transcript.)
genome : 25,509,657 - 25,509,737 (81)
query : 1 - 81 (81/81)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096467)
HIX0096467
HIT000398610 (
NR_003498
)
(Non-protein coding transcript.)
genome : 25,509,674 - 25,509,726 (53)
query : 1 - 53 (53/53)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096467)
HIX0012047
HIT000079065
(
AF400500
)
(Conserved hypothetical protein.)
genome : 25,511,585 - 25,583,288 (71,704)
query : 1 - 893 (893/893)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 12.5, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000474509 (
ENST00000390982
)
(Hypothetical short protein.)
genome : 25,511,738 - 25,511,808 (71)
query : 1 - 71 (71/71)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0096468
HIT000474753 (
ENST00000391226
)
(Non-protein coding transcript.)
genome : 25,513,613 - 25,513,698 (86)
query : 1 - 86 (86/86)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096468)
HIX0096468
HIT000398611 (
NR_003499
)
(Non-protein coding transcript.)
genome : 25,513,664 - 25,513,696 (33)
query : 1 - 33 (33/33)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096468)
HIX0012047
HIT000079067
(
AF400502
)
(Hypothetical short protein.)
genome : 25,514,834 - 25,664,609 (149,776)
query : 1 - 1,116 (1,116/1,116)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 11.5, cyto_nucl 8.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0012047
HIT000668082 (
ENST00000554726
)
(Conserved hypothetical protein.)
genome : 25,514,834 - 25,664,609 (149,776)
query : 1 - 1,116 (1,116/1,116)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 10, cyto 9.5, cyto_mito 6, extr 5, cysk_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012047)
HIX0096463
HIT000346361 (
ENST00000364764
)
(Non-protein coding transcript.)
genome : 25,514,930 - 25,515,005 (76)
query : 1 - 76 (76/76)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096463)
HIX0096463
HIT000398598 (
NR_003362
)
(Non-protein coding transcript.)
genome : 25,514,930 - 25,515,005 (76)
query : 1 - 76 (76/76)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096463)
HIX0172652
HIT000320645_04 (
NR_001289
)
(Non-protein coding transcript.)
genome : 25,523,490 - 25,523,556 (67)
query : 1 - 67 (67/67)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172652)
HIX0172652
HIT000320651_04 (
NR_001295
)
(Non-protein coding transcript.)
genome : 25,523,490 - 25,523,556 (67)
query : 1 - 67 (67/67)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172652)
HIX0172652
HIT000556895_02 (
ENST00000458961
)
(Non-protein coding transcript.)
genome : 25,523,490 - 25,523,556 (67)
query : 1 - 67 (67/67)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172652)
HIX0172652
HIT000557062_02 (
ENST00000459128
)
(Non-protein coding transcript.)
genome : 25,523,490 - 25,523,556 (67)
query : 1 - 67 (67/67)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172652)
HIX0012049
HIT000063360
(
AF037219
)
(Conserved hypothetical protein.)
genome : 25,577,974 - 25,582,533 (4,560)
query : 1 - 4,566 (4,566/4,583)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 18, nucl 16, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012049)
HIX0012049
HIT000026754
(
AL831842
)
(Hypothetical short protein.)
genome : 25,582,396 - 25,583,497 (1,102)
query : 1 - 1,102 (1,102/1,121)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, extr 8, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012049)
HIX0012049
HIT000250060
(
AL049363
)
(Hypothetical short protein.)
genome : 25,582,396 - 25,583,497 (1,102)
query : 1 - 1,101 (1,101/1,120)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, extr 8, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012049)
HIX0012049
HIT000104408 (
ENST00000232165
)
(Ubiquitin-protein ligase E3A isoform 3.)
genome : 25,582,381 - 25,684,128 (101,748)
query : 1 - 5,179 (5,179/5,179)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.19
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_nucl 10.8333, cyto_mito 9.83333,
nucl 5.5, pero 4, mito 3.5, plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012049)
HIX0012049
HIT000197505 (
NM_000462
)
(Ubiquitin-protein ligase E3A; EC=6.3.2.-; E6AP ubiquitin-protein ligase; Human papillomavirus E6-associated protein; Oncogenic protein-associated protein E6-AP; Renal carcinoma antigen NY-REN-54;)
genome : 25,582,396 - 25,684,175 (101,780)
query : 1 - 5,276 (5,276/5,276)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.19
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_nucl 11.8333, cyto_mito 8.33333,
nucl 7.5, pero 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012049)
HIX0012049
HIT000212101 (
NM_130839
)
(Ubiquitin-protein ligase E3A isoform 3.)
genome : 25,582,396 - 25,684,175 (101,780)
query : 1 - 5,211 (5,211/5,211)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.19
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_nucl 10.8333, cyto_mito 9.83333,
nucl 5.5, pero 4, mito 3.5, plas 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012049)
HIX0012049
HIT000212100 (
NM_130838
)
(Ubiquitin-protein ligase E3A isoform 1.)
genome : 25,582,396 - 25,650,653 (68,258)
query : 1 - 4,491 (4,491/4,491)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.19
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, cyto_nucl 10, nucl 8, plas 5, mito 4, pero 4,
mito_pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012049)
HIX0012049
HIT000536031 (
ENST00000438097
)
(Ubiquitin-protein ligase E3A isoform 1.)
genome : 25,582,396 - 25,650,653 (68,258)
query : 1 - 4,491 (4,491/4,491)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.19
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, cyto_nucl 10, nucl 8, plas 5, mito 4, pero 4,
mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012049)
HIX0012049
HIT000031010
(
BC002582
)
(Ubiquitin-protein ligase E3A isoform 3.)
genome : 25,584,246 - 25,684,128 (99,883)
query : 1 - 3,314 (3,314/3,331)
13 exons
identity = 1.000
3'(1.000;1.000;0.986;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.19
InterPro :
IPR000569 : HECT
GO :
0004842 : Molecular Function : ubiquitin-protein transferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_nucl 10.8333, cyto_mito 9.83333,
nucl 5.5, pero 4, mito 3.5, plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012049)
HIX0012049
HIT000075862
(
AF273050
)
(Ubiquitin-protein ligase E3A isoform 1.)
genome : 25,584,260 - 25,652,272 (68,013)
query : 1 - 2,682 (2,682/2,710)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.19
InterPro :
IPR000569 : HECT
GO :
0004842 : Molecular Function : ubiquitin-protein transferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, cyto_nucl 10, nucl 8, plas 5, mito 4, pero 4,
mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012049)
HIX0012049
HIT000221864
(
U84404
)
Representative transcript
(Ubiquitin-protein ligase E3A isoform 1.)
genome : 25,584,260 - 25,683,688 (99,429)
query : 1 - 3,169 (3,169/3,186)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.19
InterPro :
IPR000569 : HECT
GO :
0004842 : Molecular Function : ubiquitin-protein transferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, cyto_nucl 10, nucl 8, plas 5, mito 4, pero 4,
mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012049)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB179374
Danio
sp. (Zebrafish) : BC085646
Bos
sp. (Cow) : BC134678
Pongo
sp. (Orangutan) : CR860787
Oryzias
sp. (Medaka) : ENSORLT00000019737
Rattus
sp. (Rat) : ENSRNOT00000021366
Tetraodon
sp. (Tetraodon) : GSTENT00027056001
Takifugu
sp. (Fugu) : SINFRUT00000164960
Mus
sp. (Mouse) : U96636
Pan
sp. (Chimpanzee) : XM_001160998
Monodelphis
sp. (Opossum) : XM_001367377
Equus
sp. (Horse) : XM_001917171
Canis
sp. (Dog) : XM_843147
HIX0012049
HIT000425311
(
AK292514
)
(Ubiquitin-protein ligase E3A isoform 3.)
genome : 25,584,247 - 25,683,784 (99,538)
query : 2 - 2,970 (2,969/2,970)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.19
InterPro :
IPR000569 : HECT
GO :
0004842 : Molecular Function : ubiquitin-protein transferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_nucl 10.8333, cyto_mito 9.83333,
nucl 5.5, pero 4, mito 3.5, plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012049)
HIX0012049
HIT000679261 (
ENST00000566215
)
(Ubiquitin-protein ligase E3A isoform 1.)
genome : 25,584,253 - 25,683,688 (99,436)
query : 1 - 3,176 (3,176/3,176)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.19
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, cyto_nucl 10, nucl 8, plas 5, mito 4, pero 4,
mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012049)
HIX0012049
HIT000034245
(
BC009271
)
(Ubiquitin-protein ligase E3A; EC=6.3.2.-; E6AP ubiquitin-protein ligase; Human papillomavirus E6-associated protein; Oncogenic protein-associated protein E6-AP; Renal carcinoma antigen NY-REN-54;)
genome : 25,584,280 - 25,616,581 (32,302)
query : 1 - 1,884 (1,884/1,901)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR000569 : HECT
GO :
0004842 : Molecular Function : ubiquitin-protein transferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 8.5, E.R. 6.5, E.R._mito 4.5,
extr 4, nucl 3.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012049)
HIX0012049
HIT000424202
(
AK291405
)
(Ubiquitin-protein ligase E3A isoform 1.)
genome : 25,584,266 - 25,652,363 (68,098)
query : 1 - 2,767 (2,767/2,767)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.19
InterPro :
IPR000569 : HECT
GO :
0004842 : Molecular Function : ubiquitin-protein transferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, cyto_nucl 10, nucl 8, plas 5, mito 4, pero 4,
mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012049)
HIX0012049
HIT000049762
(
AK130491
)
(Ubiquitin-protein ligase E3A; EC=6.3.2.-; E6AP ubiquitin-protein ligase; Human papillomavirus E6-associated protein; Oncogenic protein-associated protein E6-AP; Renal carcinoma antigen NY-REN-54;)
genome : 25,584,271 - 25,620,685 (36,415)
query : 1 - 2,345 (2,345/2,345)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR000569 : HECT
GO :
0004842 : Molecular Function : ubiquitin-protein transferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 18, cyto_mito 11.8333, cyto_nucl 10.8333,
mito 4.5, pero 3, plas 2.5, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012049)
HIX0012049
HIT000242564
(
AB194232
)
(Ubiquitin-protein ligase E3A isoform 3.)
genome : 25,584,284 - 25,653,795 (69,512)
query : 1 - 2,699 (2,699/2,699)
12 exons
identity = 0.998
3'(1.000;1.000;1.000;0.994)5'
coverage = 1.000
EC number :
EC 6.3.2.19
InterPro :
IPR000569 : HECT
GO :
0004842 : Molecular Function : ubiquitin-protein transferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, cyto_nucl 10, nucl 8, plas 5, mito 4, pero 4,
mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012049)
HIX0012049
HIT000325029
(
X98031
)
(Ubiquitin-protein ligase E3A; EC=6.3.2.-; E6AP ubiquitin-protein ligase; Human papillomavirus E6-associated protein; Oncogenic protein-associated protein E6-AP; Renal carcinoma antigen NY-REN-54;)
genome : 25,584,284 - 25,653,795 (69,512)
query : 1 - 2,628 (2,628/2,628)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR000569 : HECT
GO :
0004842 : Molecular Function : ubiquitin-protein transferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_nucl 11.8333, cyto_mito 8.33333,
nucl 7.5, pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012049)
HIX0012049
HIT000481190 (
ENST00000397954
)
(Ubiquitin-protein ligase E3A; EC=6.3.2.-; E6AP ubiquitin-protein ligase; Human papillomavirus E6-associated protein; Oncogenic protein-associated protein E6-AP; Renal carcinoma antigen NY-REN-54;)
genome : 25,584,284 - 25,653,795 (69,512)
query : 1 - 2,628 (2,628/2,628)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_nucl 11.8333, cyto_mito 8.33333,
nucl 7.5, pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012049)
HIX0012049
HIT000526918 (
ENST00000428984
)
(Ubiquitin-protein ligase E3A isoform 1.)
genome : 25,584,284 - 25,653,795 (69,512)
query : 1 - 2,699 (2,699/2,699)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.19
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, cyto_nucl 10, nucl 8, plas 5, mito 4, pero 4,
mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012049)
HIX0012049
HIT000325031
(
X98033
)
(Ubiquitin-protein ligase E3A isoform 3.)
genome : 25,584,284 - 25,650,660 (66,377)
query : 10 - 2,619 (2,610/2,619)
10 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.997
EC number :
EC 6.3.2.19
InterPro :
IPR000569 : HECT
GO :
0004842 : Molecular Function : ubiquitin-protein transferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_nucl 10.8333, cyto_mito 9.83333,
nucl 5.5, pero 4, mito 3.5, plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012049)
HIX0012049
HIT000191841
(
L07557
)
(Ubiquitin-protein ligase E3A; EC=6.3.2.-; E6AP ubiquitin-protein ligase; Human papillomavirus E6-associated protein; Oncogenic protein-associated protein E6-AP; Renal carcinoma antigen NY-REN-54;)
genome : 25,584,284 - 25,650,648 (66,365)
query : 1 - 2,625 (2,625/2,625)
10 exons
identity = 0.986
3'(1.000;1.000;1.000;0.994)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR000569 : HECT
GO :
0004842 : Molecular Function : ubiquitin-protein transferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, cyto_nucl 10, nucl 8, plas 5, mito 4, pero 4,
mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012049)
HIX0012049
HIT000325030
(
X98032
)
(Ubiquitin-protein ligase E3A; EC=6.3.2.-; E6AP ubiquitin-protein ligase; Human papillomavirus E6-associated protein; Oncogenic protein-associated protein E6-AP; Renal carcinoma antigen NY-REN-54;)
genome : 25,584,284 - 25,620,910 (36,627)
query : 3 - 2,559 (2,557/2,559)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 6.3.2.-
InterPro :
IPR000569 : HECT
GO :
0004842 : Molecular Function : ubiquitin-protein transferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, cyto_nucl 10, nucl 8, plas 5, mito 4, pero 4,
mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012049)
HIX0222867
HIT000194071
(
L80005
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,068,794 - 25,223,729 (154,936)
query : 1 - 1,751 (1,751/1,751)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;0.991;1.000;1.000;0.993;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000208880 (
NM_022806
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,068,794 - 25,223,729 (154,936)
query : 1 - 1,616 (1,616/1,616)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000208881 (
NM_022807
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,068,794 - 25,223,729 (154,936)
query : 1 - 1,751 (1,751/1,751)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000208882 (
NM_022808
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,068,794 - 25,223,729 (154,936)
query : 1 - 1,643 (1,643/1,643)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000483095 (
ENST00000400098
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,068,794 - 25,223,729 (154,936)
query : 1 - 1,643 (1,643/1,643)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000483097 (
ENST00000400100
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,068,794 - 25,223,729 (154,936)
query : 1 - 1,751 (1,751/1,751)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000194070
(
L80004
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,101,698 - 25,223,729 (122,032)
query : 1 - 1,605 (1,605/1,605)
12 exons
identity = 0.999
5'(1.000;1.000;0.991;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000208879 (
NM_022805
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,101,698 - 25,223,729 (122,032)
query : 1 - 1,605 (1,605/1,605)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000483094 (
ENST00000400097
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,101,698 - 25,223,729 (122,032)
query : 1 - 1,605 (1,605/1,605)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000330413
(
AK222633
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,101,727 - 25,223,722 (121,996)
query : 1 - 1,569 (1,569/1,585)
12 exons
identity = 0.997
5'(0.993;1.000;0.991;1.000;0.993;0.993;0.993;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000093809
(
BC035280
)
Representative transcript
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,101,731 - 25,223,722 (121,992)
query : 1 - 1,788 (1,788/1,833)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB125194
Gallus
sp. (Chicken) : AF134830
Mus
sp. (Mouse) : BC072564
Rattus
sp. (Rat) : BC098906
Tetraodon
sp. (Tetraodon) : CR708735
Pongo
sp. (Orangutan) : CR860509
Danio
sp. (Zebrafish) : ENSDART00000011663
Oryzias
sp. (Medaka) : ENSORLT00000011742
Pan
sp. (Chimpanzee) : ENSPTRT00000012599
Monodelphis
sp. (Opossum) : XM_001374334
Equus
sp. (Horse) : XM_001492702
Canis
sp. (Dog) : XM_536165
HIX0222867
HIT000666971 (
ENST00000553597
)
(SNRPN upstream reading frame protein;)
genome : 25,101,748 - 25,219,581 (117,834)
query : 1 - 849 (849/849)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000397370 (
ENST00000390687
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,200,074 - 25,223,870 (23,797)
query : 1 - 1,528 (1,528/1,528)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000307296 (
ENST00000346403
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,200,082 - 25,223,730 (23,649)
query : 1 - 1,304 (1,304/1,304)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000696830 (
ENST00000584968
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,200,082 - 25,221,474 (21,393)
query : 1 - 908 (908/908)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 3, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000667593 (
ENST00000554227
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,200,095 - 25,223,686 (23,592)
query : 1 - 1,763 (1,763/1,763)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.3333, nucl 16.5, cyto 11,
cyto_plas 6.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000031494
(
BC003180
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,200,146 - 25,223,730 (23,585)
query : 13 - 1,328 (1,316/1,345)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.991
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000130764 (
ENST00000338094
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,200,135 - 25,223,729 (23,595)
query : 1 - 1,326 (1,326/1,326)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000191278
(
J04615
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,200,136 - 25,223,729 (23,594)
query : 2 - 1,326 (1,325/1,326)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000199961 (
NM_003097
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,200,135 - 25,223,729 (23,595)
query : 1 - 1,326 (1,326/1,326)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000219761
(
U41303
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,200,135 - 25,223,729 (23,595)
query : 1 - 1,326 (1,326/1,326)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000317015 (
NM_005678
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,200,135 - 25,223,729 (23,595)
query : 1 - 1,326 (1,326/1,326)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000068634
(
AF101044
)
(SNRPN upstream reading frame protein;)
genome : 25,200,136 - 25,219,603 (19,468)
query : 2 - 468 (467/468)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.993)3'
coverage = 0.998
InterPro :
IPR009847 : SNURFRPN4
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 11.5, extr 10, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000333654
(
BC000445
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,200,144 - 25,223,730 (23,587)
query : 9 - 1,326 (1,318/1,345)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000023393
(
AK098563
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,200,136 - 25,223,729 (23,594)
query : 1 - 1,325 (1,325/1,325)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000089733
(
BC018809
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,200,145 - 25,223,730 (23,586)
query : 1 - 1,317 (1,317/1,336)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000034771
(
BC010057
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,200,146 - 25,223,722 (23,577)
query : 1 - 1,308 (1,308/1,325)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000334123
(
BC063608
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,200,147 - 25,223,730 (23,584)
query : 1 - 1,315 (1,315/1,331)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000691005 (
ENST00000579070
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,200,150 - 25,223,012 (22,863)
query : 1 - 871 (871/871)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14, nucl 8.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000691982 (
ENST00000580062
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,200,151 - 25,222,997 (22,847)
query : 1 - 796 (796/796)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 9, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000689515 (
ENST00000577565
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,200,152 - 25,223,695 (23,544)
query : 1 - 1,298 (1,298/1,298)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000039848
(
BC025178
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,200,168 - 25,223,722 (23,555)
query : 1 - 1,286 (1,286/1,300)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000664949 (
ENST00000551312
)
(SNRPN upstream reading frame protein;)
genome : 25,200,181 - 25,245,423 (45,243)
query : 1 - 1,325 (1,325/1,325)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 11.5, extr 10, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000670530 (
ENST00000557230
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,200,181 - 25,245,423 (45,243)
query : 1 - 669 (669/669)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 10, pero 6, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000077323
(
AF319522
)
(SNRPN upstream reading frame protein;)
genome : 25,200,181 - 25,244,175 (43,995)
query : 1 - 1,243 (1,243/1,243)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;0.991;1.000;0.998;1.000)3'
coverage = 1.000
InterPro :
IPR009847 : SNURFRPN4
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 11.5, extr 10, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000077324
(
AF319523
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,200,181 - 25,244,175 (43,995)
query : 1 - 588 (588/588)
6 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;0.986;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 10, pero 6, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000050889
(
BC024777
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,201,570 - 25,223,722 (22,153)
query : 1 - 1,442 (1,442/1,456)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000386772
(
BC113069
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,207,283 - 25,222,171 (14,889)
query : 6 - 789 (784/789)
6 exons
identity = 0.994
5'(0.986;1.000;1.000;1.000;1.000;0.973)3'
coverage = 0.994
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.8333, cyto_plas 9.83333,
nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000321528
(
X15892
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,213,079 - 25,223,721 (10,643)
query : 49 - 1,195 (1,147/1,195)
8 exons
identity = 0.994
5'(0.974;0.993;1.000;1.000;1.000;0.993;0.992;
1.000)3'
coverage = 0.960
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000042992
(
AK123119
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,218,866 - 25,223,721 (4,856)
query : 1 - 1,904 (1,904/1,904)
8 exons
identity = 0.998
5'(0.997;1.000;1.000;1.000;1.000;0.993;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.3333, nucl 16.5, cyto 11,
cyto_plas 6.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000542137 (
ENST00000444203
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,218,866 - 25,223,721 (4,856)
query : 1 - 1,904 (1,904/1,904)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.3333, nucl 16.5, cyto 11,
cyto_plas 6.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
HIX0222867
HIT000029773
(
BC000611
)
(Small nuclear ribonucleoprotein-associated protein N; snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein;)
genome : 25,219,457 - 25,223,722 (4,266)
query : 42 - 1,040 (999/1,057)
7 exons
identity = 0.994
5'(0.959;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.961
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222867)
AC087490.6
24000001-24155476 F -
NCBI
AC021439.9
24155477-24284120 F -
NCBI
AC087474.9
24284121-24439558 F -
NCBI
AC087463.5
24439559-24627932 F -
NCBI
AC139362.2
24627933-24797857 F -
NCBI
AC139147.2
24797858-24874198 F -
NCBI
AC100720.8
24874199-24931812 F -
NCBI
AC090983.13
24931813-25113842 F -
NCBI
AC090602.16
25113843-25200763 F +
NCBI
AC124312.5
25200764-25350890 F -
NCBI
AC124303.5
25350891-25504314 F -
NCBI
AC100774.2
25504315-25600000 F +
NCBI