bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0012604
HIT000021917
(
AK097062
)
Representative transcript
(Protein FAM169B.)
genome : 98,980,391 - 99,057,611 (77,221)
query : 1 - 3,376 (3,376/3,376)
7 exons
identity = 0.975
3'(0.994;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012604)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC039209
Danio
sp. (Zebrafish) : BC150409
Gallus
sp. (Chicken) : CR390132
Bos
sp. (Cow) : ENSBTAT00000027333
Equus
sp. (Horse) : ENSECAT00000018979
Pongo
sp. (Orangutan) : ENSPPYT00000008035
Rattus
sp. (Rat) : XM_001059420
Pan
sp. (Chimpanzee) : XM_001140789
Monodelphis
sp. (Opossum) : XM_001372567
Canis
sp. (Dog) : XM_845046
HIX0012604
HIT000318649 (
NM_182562
)
(Protein FAM169B.)
genome : 98,980,391 - 99,057,611 (77,221)
query : 1 - 3,298 (3,298/3,298)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012604)
HIX0012604
HIT000671541 (
ENST00000558256
)
(Protein FAM169B.)
genome : 98,980,391 - 99,057,611 (77,221)
query : 1 - 3,298 (3,298/3,298)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012604)
HIX0012604
HIT000128063 (
ENST00000332908
)
(Protein FAM169B.)
genome : 98,980,391 - 99,029,207 (48,817)
query : 1 - 3,129 (3,129/3,129)
5 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012604)
HIX0222381
HIT000671133 (
ENST00000557841
)
(Conserved hypothetical protein.)
genome : 99,010,069 - 99,010,641 (573)
query : 1 - 573 (573/573)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222381)
HIX0222584
HIT000673467 (
ENST00000560221
)
(Hypothetical short protein.)
genome : 99,190,180 - 99,190,600 (421)
query : 1 - 334 (334/334)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16.5, cyto_mito 11.3333, cyto_nucl 6.33333,
extr 6, cyto 4.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222584)
HIX0038072
HIT000110237 (
ENST00000268035
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Contains: Insulin-like growth factor 1 receptor alpha chain; Contains: Insulin-like growth factor 1 receptor beta chain; Precursor;)
genome : 99,192,200 - 99,507,759 (315,560)
query : 1 - 11,803 (11,803/11,803)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10.5, extr_plas 9.5, plas 7.5, pero 5.5,
cyto_pero 5.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000409813
(
AB425196
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Contains: Insulin-like growth factor 1 receptor alpha chain; Contains: Insulin-like growth factor 1 receptor beta chain; Precursor;)
genome : 99,192,273 - 99,507,758 (315,486)
query : 1 - 11,715 (11,715/11,715)
21 exons
identity = 0.998
5'(0.986;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR000494 : Receptor L-domain
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR002011 : Tyrosine-protein kinase, receptor class II, conserved site
IPR003961 : Fibronectin type III
IPR006211 : Furin-like cysteine-rich domain
IPR006212 : Furin-like repeat
IPR008266 : Tyrosine-protein kinase, active site
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0004714 : Molecular Function : transmembrane receptor protein tyrosine kinase activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0007169 : Biological Process : transmembrane receptor protein tyrosine kinase signaling pathway
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10.5, extr_plas 9.5, plas 7.5, pero 5.5,
cyto_pero 5.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000672036 (
ENST00000558762
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Contains: Insulin-like growth factor 1 receptor alpha chain; Contains: Insulin-like growth factor 1 receptor beta chain; Precursor;)
genome : 99,192,273 - 99,507,758 (315,486)
query : 1 - 11,726 (11,726/11,726)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10.5, extr_plas 9.5, plas 7.5, pero 5.5,
cyto_pero 5.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000197885 (
NM_000875
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Contains: Insulin-like growth factor 1 receptor alpha chain; Contains: Insulin-like growth factor 1 receptor beta chain; Precursor;)
genome : 99,192,778 - 99,507,759 (314,982)
query : 18 - 11,242 (11,225/11,242)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10.5, extr_plas 9.5, plas 7.5, pero 5.5,
cyto_pero 5.5, cyto 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000321040
(
X04434
)
Representative transcript
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Contains: Insulin-like growth factor 1 receptor alpha chain; Contains: Insulin-like growth factor 1 receptor beta chain; Precursor;)
genome : 99,192,778 - 99,501,511 (308,734)
query : 14 - 4,989 (4,976/4,989)
21 exons
identity = 0.999
5'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.992;1.000;0.998)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR000494 : Receptor L-domain
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR002011 : Tyrosine-protein kinase, receptor class II, conserved site
IPR003961 : Fibronectin type III
IPR006211 : Furin-like cysteine-rich domain
IPR006212 : Furin-like repeat
IPR008266 : Tyrosine-protein kinase, active site
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0004714 : Molecular Function : transmembrane receptor protein tyrosine kinase activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0007169 : Biological Process : transmembrane receptor protein tyrosine kinase signaling pathway
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10.5, extr_plas 9.5, plas 7.5, pero 5.5,
cyto_pero 5.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF056187
Danio
sp. (Zebrafish) : AF400275
Gallus
sp. (Chicken) : AJ223164
Canis
sp. (Dog) : AY541499
Pongo
sp. (Orangutan) : CR858259
Monodelphis
sp. (Opossum) : ENSMODT00000016263
Oryzias
sp. (Medaka) : ENSORLT00000010717
Oryzias
sp. (Medaka) : ENSORLT00000018467
Tetraodon
sp. (Tetraodon) : GSTENT00035595001
Rattus
sp. (Rat) : L29232
Takifugu
sp. (Fugu) : SINFRUT00000153394
Takifugu
sp. (Fugu) : SINFRUT00000178727
Bos
sp. (Cow) : X54980
Macaca
sp. (Macaque) : XM_001100407
Pan
sp. (Chimpanzee) : XM_001136377
Equus
sp. (Horse) : XM_001489765
HIX0038072
HIT000387063
(
BC113610
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Contains: Insulin-like growth factor 1 receptor alpha chain; Contains: Insulin-like growth factor 1 receptor beta chain; Precursor;)
genome : 99,192,778 - 99,501,057 (308,280)
query : 1 - 4,522 (4,522/4,522)
21 exons
identity = 1.000
5'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR000494 : Receptor L-domain
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR002011 : Tyrosine-protein kinase, receptor class II, conserved site
IPR003961 : Fibronectin type III
IPR006211 : Furin-like cysteine-rich domain
IPR006212 : Furin-like repeat
IPR008266 : Tyrosine-protein kinase, active site
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0004714 : Molecular Function : transmembrane receptor protein tyrosine kinase activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0007169 : Biological Process : transmembrane receptor protein tyrosine kinase signaling pathway
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10.5, extr_plas 9.5, plas 7.5, pero 5.5,
cyto_pero 5.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000387065
(
BC113612
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Contains: Insulin-like growth factor 1 receptor alpha chain; Contains: Insulin-like growth factor 1 receptor beta chain; Precursor;)
genome : 99,192,778 - 99,501,057 (308,280)
query : 1 - 4,522 (4,522/4,522)
21 exons
identity = 0.999
5'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR000494 : Receptor L-domain
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR002011 : Tyrosine-protein kinase, receptor class II, conserved site
IPR003961 : Fibronectin type III
IPR006211 : Furin-like cysteine-rich domain
IPR006212 : Furin-like repeat
IPR008266 : Tyrosine-protein kinase, active site
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0004714 : Molecular Function : transmembrane receptor protein tyrosine kinase activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0007169 : Biological Process : transmembrane receptor protein tyrosine kinase signaling pathway
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10.5, extr_plas 9.5, plas 7.5, pero 5.5,
cyto_pero 5.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000502164
(
BC143721
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Contains: Insulin-like growth factor 1 receptor alpha chain; Contains: Insulin-like growth factor 1 receptor beta chain; Precursor;)
genome : 99,192,778 - 99,501,057 (308,280)
query : 1 - 4,520 (4,520/4,520)
21 exons
identity = 0.999
5'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR000494 : Receptor L-domain
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR002011 : Tyrosine-protein kinase, receptor class II, conserved site
IPR003961 : Fibronectin type III
IPR006211 : Furin-like cysteine-rich domain
IPR006212 : Furin-like repeat
IPR008266 : Tyrosine-protein kinase, active site
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0004714 : Molecular Function : transmembrane receptor protein tyrosine kinase activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0007169 : Biological Process : transmembrane receptor protein tyrosine kinase signaling pathway
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10.5, extr_plas 9.5, plas 7.5, pero 5.5,
cyto_pero 5.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000340046
(
BC111788
)
(Hypothetical protein.)
genome : 99,192,817 - 99,193,768 (952)
query : 12 - 962 (951/963)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 0.988
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15, cyto 9.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000558196
(
EU826611
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Contains: Insulin-like growth factor 1 receptor alpha chain; Contains: Insulin-like growth factor 1 receptor beta chain; Precursor;)
genome : 99,192,811 - 99,465,671 (272,861)
query : 1 - 2,496 (2,496/2,496)
11 exons
identity = 0.998
5'(1.000;0.998;1.000;1.000;1.000;1.000;1.000;
0.996;1.000;1.000;0.993)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR000494 : Receptor L-domain
IPR003961 : Fibronectin type III
IPR006211 : Furin-like cysteine-rich domain
IPR006212 : Furin-like repeat
IPR009030 : Insulin-like growth factor binding protein, N-terminal
GO :
0004714 : Molecular Function : transmembrane receptor protein tyrosine kinase activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0007169 : Biological Process : transmembrane receptor protein tyrosine kinase signaling pathway
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 3.5, cyto_nucl 2.5, plas 2, mito 2,
pero 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000558197
(
EU826612
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Contains: Insulin-like growth factor 1 receptor alpha chain; Contains: Insulin-like growth factor 1 receptor beta chain; Precursor;)
genome : 99,192,811 - 99,460,184 (267,374)
query : 1 - 2,280 (2,280/2,280)
10 exons
identity = 0.999
5'(1.000;1.000;0.997;1.000;1.000;1.000;0.992;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR000494 : Receptor L-domain
IPR003961 : Fibronectin type III
IPR006211 : Furin-like cysteine-rich domain
IPR006212 : Furin-like repeat
IPR009030 : Insulin-like growth factor binding protein, N-terminal
GO :
0004714 : Molecular Function : transmembrane receptor protein tyrosine kinase activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0007169 : Biological Process : transmembrane receptor protein tyrosine kinase signaling pathway
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_pero 3.5, cyto 3, pero 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000673178 (
ENST00000559925
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Contains: Insulin-like growth factor 1 receptor alpha chain; Contains: Insulin-like growth factor 1 receptor beta chain; Precursor;)
genome : 99,192,811 - 99,460,184 (267,374)
query : 1 - 2,280 (2,280/2,280)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_pero 3.5, cyto 3, pero 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000671636 (
ENST00000558355
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Contains: Insulin-like growth factor 1 receptor alpha chain; Contains: Insulin-like growth factor 1 receptor beta chain; Precursor;)
genome : 99,251,060 - 99,434,848 (183,789)
query : 1 - 572 (572/572)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 7, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000671228 (
ENST00000557938
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Contains: Insulin-like growth factor 1 receptor alpha chain; Contains: Insulin-like growth factor 1 receptor beta chain; Precursor;)
genome : 99,277,941 - 99,442,775 (164,835)
query : 1 - 574 (574/574)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0012605
HIT000016840
(
AK091973
)
Representative transcript
(Conserved hypothetical protein.)
genome : 99,280,827 - 99,282,835 (2,009)
query : 3 - 2,015 (2,013/2,015)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 12.5, nucl 11.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012605)
HIX0012606
HIT000017797
(
AK092930
)
Representative transcript
(Conserved hypothetical protein.)
genome : 99,304,150 - 99,305,960 (1,811)
query : 1 - 1,808 (1,808/1,808)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 12.5, cyto 12.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012606)
HIX0222237
HIT000692638 (
ENST00000580728
)
(Non-protein coding transcript.)
genome : 99,327,655 - 99,327,731 (77)
query : 1 - 77 (77/77)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222237)
HIX0222237
HIT000725927 (
NR_039864
)
(Non-protein coding transcript.)
genome : 99,327,655 - 99,327,731 (77)
query : 1 - 77 (77/77)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222237)
HIX0038072
HIT000673433 (
ENST00000560186
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Contains: Insulin-like growth factor 1 receptor alpha chain; Contains: Insulin-like growth factor 1 receptor beta chain; Precursor;)
genome : 99,364,095 - 99,440,148 (76,054)
query : 1 - 551 (551/551)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 6, nucl 5.5, cyto_nucl 5.16667,
cyto_pero 3.83333, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000673522 (
ENST00000560277
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Contains: Insulin-like growth factor 1 receptor alpha chain; Contains: Insulin-like growth factor 1 receptor beta chain; Precursor;)
genome : 99,364,113 - 99,440,078 (75,966)
query : 1 - 526 (526/526)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000671163 (
ENST00000557873
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Contains: Insulin-like growth factor 1 receptor alpha chain; Contains: Insulin-like growth factor 1 receptor beta chain; Precursor;)
genome : 99,416,948 - 99,440,118 (23,171)
query : 1 - 583 (583/583)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0222465
HIT000672010 (
ENST00000558736
)
(Non-protein coding transcript.)
genome : 99,423,888 - 99,436,764 (12,877)
query : 1 - 263 (263/263)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222465)
HIX0038072
HIT000672172 (
ENST00000558898
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Contains: Insulin-like growth factor 1 receptor alpha chain; Contains: Insulin-like growth factor 1 receptor beta chain; Precursor;)
genome : 99,433,570 - 99,454,627 (21,058)
query : 1 - 1,034 (1,034/1,034)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 11.5, cyto 10.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000673674 (
ENST00000560432
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Contains: Insulin-like growth factor 1 receptor alpha chain; Contains: Insulin-like growth factor 1 receptor beta chain; Precursor;)
genome : 99,433,771 - 99,440,115 (6,345)
query : 1 - 657 (657/657)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000672220 (
ENST00000558947
)
(Conserved hypothetical protein.)
genome : 99,440,515 - 99,442,805 (2,291)
query : 1 - 303 (303/303)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000062548
(
AF020763
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Contains: Insulin-like growth factor 1 receptor alpha chain; Contains: Insulin-like growth factor 1 receptor beta chain; Precursor;)
genome : 99,441,845 - 99,443,609 (1,765)
query : 30 - 1,799 (1,770/1,799)
1 exon
identity = 0.986
5'(0.986)3'
coverage = 0.984
EC number :
EC 2.7.10.1
InterPro :
IPR000494 : Receptor L-domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000672844 (
ENST00000559582
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Contains: Insulin-like growth factor 1 receptor alpha chain; Contains: Insulin-like growth factor 1 receptor beta chain; Precursor;)
genome : 99,443,839 - 99,456,343 (12,505)
query : 1 - 567 (567/567)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 14, nucl 12, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000673392 (
ENST00000560144
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Contains: Insulin-like growth factor 1 receptor alpha chain; Contains: Insulin-like growth factor 1 receptor beta chain; Precursor;)
genome : 99,456,405 - 99,465,471 (9,067)
query : 1 - 525 (525/525)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 9.5, cyto 8, nucl 7, mito 2,
pero 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000674279 (
ENST00000561049
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Fragments;)
genome : 99,459,714 - 99,465,660 (5,947)
query : 1 - 676 (676/682)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.991
EC number :
EC 2.7.10.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11.1667, extr 10,
cyto_pero 4.66667, cyto 4.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000673588 (
ENST00000560343
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Fragments;)
genome : 99,467,011 - 99,467,865 (855)
query : 1 - 343 (343/343)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 9.5, cyto_nucl 7, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000254633
(
AY429545
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Contains: Insulin-like growth factor 1 receptor alpha chain; Contains: Insulin-like growth factor 1 receptor beta chain; Precursor;)
genome : 99,467,829 - 99,478,595 (10,767)
query : 1 - 310 (310/310)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 14, plas 6, E.R. 4, cyto_nucl 3, extr_plas 3,
E.R._golg 3, cysk_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000674206 (
ENST00000560972
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Contains: Insulin-like growth factor 1 receptor alpha chain; Contains: Insulin-like growth factor 1 receptor beta chain; Precursor;)
genome : 99,467,829 - 99,478,595 (10,767)
query : 1 - 310 (310/310)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 14, plas 6, E.R. 4, cyto_nucl 3, extr_plas 3,
E.R._golg 3, cysk_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0133303
HIT000450511
(
DQ583980
)
Representative transcript
(Non-protein coding transcript.)
genome : 99,490,932 - 99,490,961 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0133303)
HIX0133319
HIT000450847
(
DQ584316
)
Representative transcript
(Non-protein coding transcript.)
genome : 99,495,095 - 99,495,124 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0133319)
HIX0038072
HIT000672025 (
ENST00000558751
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Fragments;)
genome : 99,496,024 - 99,500,521 (4,498)
query : 1 - 548 (548/548)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 13, cyto 10, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0222170
HIT000672733 (
ENST00000559468
)
(Conserved hypothetical protein.)
genome : 99,497,378 - 99,646,030 (148,653)
query : 1 - 588 (588/588)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13, nucl 8.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222170)
HIX0222170
HIT000712199 (
ENST00000600455
)
(Conserved hypothetical protein.)
genome : 99,497,378 - 99,646,030 (148,653)
query : 1 - 588 (588/588)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13, nucl 8.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222170)
HIX0038072
HIT000338653
(
BC107089
)
(Insulin-like growth factor 1 receptor; EC=2.7.10.1; Insulin-like growth factor I receptor; IGF-I receptor; AltName: CD_antigen=CD221; Fragments;)
genome : 99,500,156 - 99,500,805 (650)
query : 9 - 658 (650/660)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.985
EC number :
EC 2.7.10.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 7, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000217853
(
U09023
)
(Hypothetical short protein.)
genome : 99,501,512 - 99,501,779 (268)
query : 1 - 268 (268/268)
1 exon
identity = 0.963
5'(0.963)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, extr 11, nucl 7, cyto_mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000455052
(
DQ588521
)
(Non-protein coding transcript.)
genome : 99,501,666 - 99,501,695 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000455362
(
DQ588831
)
(Non-protein coding transcript.)
genome : 99,502,956 - 99,502,985 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000468301
(
DQ601770
)
(Non-protein coding transcript.)
genome : 99,504,417 - 99,504,446 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
5'(0.967)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000035008
(
BC010607
)
(Hypothetical protein.)
genome : 99,504,512 - 99,507,759 (3,248)
query : 1 - 3,247 (3,247/3,270)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 14, cyto_nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000429054
(
AK310188
)
(Hypothetical protein.)
genome : 99,505,239 - 99,506,443 (1,205)
query : 1 - 1,205 (1,205/1,205)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 14, cyto_nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000265716
(
BC078157
)
(Hypothetical short protein.)
genome : 99,506,095 - 99,507,759 (1,665)
query : 1 - 1,662 (1,662/1,676)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000462466
(
DQ595935
)
(Non-protein coding transcript.)
genome : 99,506,142 - 99,506,171 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000339860
(
BC111046
)
(Hypothetical short protein.)
genome : 99,506,184 - 99,507,456 (1,273)
query : 1 - 1,273 (1,273/1,288)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0038072
HIT000266211
(
BC088377
)
(Hypothetical short protein.)
genome : 99,506,494 - 99,507,759 (1,266)
query : 1 - 1,266 (1,266/1,293)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038072)
HIX0018089
HIT000014768
(
AK058162
)
Representative transcript
(Pyroglutamyl-peptidase 1-like protein isoform 2.)
genome : 99,511,459 - 99,551,024 (39,566)
query : 1 - 1,484 (1,484/1,484)
5 exons
identity = 0.992
3'(0.996;1.000;1.000;0.991;0.982)5'
coverage = 1.000
EC number :
EC 3.4.19.-
InterPro :
IPR000816 : Peptidase C15, pyroglutamyl peptidase I
IPR016125 : Peptidase C15, pyroglutamyl peptidase I-like
GO :
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 8, cyto_nucl 7.5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018089)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK021221
Bos
sp. (Cow) : ENSBTAT00000028693
Equus
sp. (Horse) : ENSECAT00000019127
Gallus
sp. (Chicken) : ENSGALT00000011355
Monodelphis
sp. (Opossum) : ENSMODT00000016271
Pongo
sp. (Orangutan) : ENSPPYT00000008038
Rattus
sp. (Rat) : ENSRNOT00000019418
Macaca
sp. (Macaque) : XM_001108144
Pan
sp. (Chimpanzee) : XM_001137330
Canis
sp. (Dog) : XM_545829
Danio
sp. (Zebrafish) : XM_681991
HIX0018089
HIT000634759 (
ENST00000535714
)
(Pyroglutamyl-peptidase 1-like protein isoform 2.)
genome : 99,511,459 - 99,551,024 (39,566)
query : 1 - 1,483 (1,483/1,483)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 8, cyto_nucl 7.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018089)
HIX0018089
HIT000654466 (
NM_001167902
)
(Pyroglutamyl-peptidase 1-like protein isoform 2.)
genome : 99,511,459 - 99,551,024 (39,566)
query : 1 - 1,483 (1,483/1,483)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 8, cyto_nucl 7.5, nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018089)
HIX0018089
HIT000707084 (
ENST00000595289
)
(Pyroglutamyl-peptidase 1-like protein isoform 2.)
genome : 99,511,459 - 99,551,024 (39,566)
query : 1 - 1,483 (1,483/1,483)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 8, cyto_nucl 7.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018089)
HIX0018089
HIT000485659 (
NM_001102612
)
(Pyroglutamyl-peptidase 1-like protein isoform 2.)
genome : 99,511,459 - 99,548,885 (37,427)
query : 1 - 1,139 (1,139/1,139)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13, extr 5, nucl 3, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018089)
HIX0018089
HIT000337831
(
BC104743
)
(Pyroglutamyl-peptidase 1-like protein isoform 2.)
genome : 99,511,509 - 99,548,791 (37,283)
query : 1 - 995 (995/995)
5 exons
identity = 0.997
3'(0.998;1.000;1.000;0.978;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.-
InterPro :
IPR000816 : Peptidase C15, pyroglutamyl peptidase I
IPR016125 : Peptidase C15, pyroglutamyl peptidase I-like
GO :
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14, extr 5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018089)
HIX0018089
HIT000337832
(
BC104744
)
(Pyroglutamyl-peptidase 1-like protein isoform 2.)
genome : 99,511,509 - 99,548,791 (37,283)
query : 1 - 903 (903/903)
4 exons
identity = 0.998
3'(0.995;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.-
InterPro :
IPR000816 : Peptidase C15, pyroglutamyl peptidase I
IPR016125 : Peptidase C15, pyroglutamyl peptidase I-like
GO :
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 8, cyto_nucl 7.5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018089)
HIX0018089
HIT000360199 (
ENST00000378919
)
(Pyroglutamyl-peptidase 1-like protein isoform 2.)
genome : 99,511,509 - 99,548,791 (37,283)
query : 1 - 995 (995/995)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13, extr 5, nucl 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018089)
HIX0018089
HIT000386433
(
BC105686
)
(Pyroglutamyl-peptidase 1-like protein isoform 2.)
genome : 99,511,509 - 99,548,791 (37,283)
query : 1 - 898 (898/898)
4 exons
identity = 0.994
3'(0.998;0.982;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.-
InterPro :
IPR000816 : Peptidase C15, pyroglutamyl peptidase I
IPR016125 : Peptidase C15, pyroglutamyl peptidase I-like
GO :
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 8, cyto_nucl 7.5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018089)
HIX0018089
HIT000710610 (
ENST00000598847
)
(Pyroglutamyl-peptidase 1-like protein isoform 1.)
genome : 99,511,509 - 99,548,791 (37,283)
query : 1 - 995 (995/995)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13, extr 5, nucl 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018089)
HIX0172939
HIT000445746_04
(
DQ579215
)
Representative transcript
(Non-protein coding transcript.)
genome : 99,556,820 - 99,556,848 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172939)
HIX0133454
HIT000454585
(
DQ588054
)
Representative transcript
(Non-protein coding transcript.)
genome : 99,563,121 - 99,563,150 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0133454)
HIX0038271
HIT000250189
(
AL109706
)
Representative transcript
(Conserved hypothetical protein.)
genome : 99,571,773 - 99,574,274 (2,502)
query : 1 - 2,502 (2,502/2,520)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 11.5, extr 10, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038271)
HIX0022355
HIT000028174
(
AL833262
)
Representative transcript
(Synemin isoform B.)
genome : 99,638,420 - 99,675,798 (37,379)
query : 1 - 5,908 (5,908/5,976)
5 exons
identity = 0.999
5'(1.000;0.992;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001664 : Intermediate filament protein
IPR018039 : Intermediate filament protein, conserved site
GO :
0005198 : Molecular Function : structural molecule activity
0005882 : Cellular Component : intermediate filament
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 14.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022355)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB091769
Mus
sp. (Mouse) : BC026872
Canis
sp. (Dog) : ENSCAFT00000017267
Pongo
sp. (Orangutan) : ENSPPYT00000008039
Gallus
sp. (Chicken) : U28143
Macaca
sp. (Macaque) : XM_001108469
Monodelphis
sp. (Opossum) : XM_001372745
Equus
sp. (Horse) : XM_001917718
Bos
sp. (Cow) : XM_870453
Pan
sp. (Chimpanzee) : XR_023327
HIX0022355
HIT000673913 (
ENST00000560674
)
(Synemin isoform B.)
genome : 99,638,420 - 99,675,798 (37,379)
query : 1 - 5,908 (5,908/5,908)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 14.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022355)
HIX0022355
HIT000435951
(
BC151243
)
(Synemin; Desmuslin;)
genome : 99,645,247 - 99,675,789 (30,543)
query : 7 - 7,389 (7,383/7,427)
4 exons
identity = 0.998
5'(0.997;0.992;1.000;0.999)3'
coverage = 0.999
InterPro :
IPR001664 : Intermediate filament protein
IPR018039 : Intermediate filament protein, conserved site
GO :
0005198 : Molecular Function : structural molecule activity
0005882 : Cellular Component : intermediate filament
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 18, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022355)
HIX0022355
HIT000674549 (
ENST00000561323
)
(Synemin isoform A.)
genome : 99,645,241 - 99,675,794 (30,554)
query : 1 - 7,393 (7,393/7,393)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022355)
HIX0022355
HIT000000059
(
AB002351
)
(Synemin; Desmuslin;)
genome : 99,645,248 - 99,675,788 (30,541)
query : 1 - 7,381 (7,381/7,381)
4 exons
identity = 0.998
5'(0.997;0.992;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 18, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022355)
HIX0022355
HIT000205380 (
NM_015286
)
(Synemin isoform B.)
genome : 99,645,286 - 99,675,800 (30,515)
query : 1 - 6,419 (6,419/6,419)
5 exons
identity = 1.000
5'(0.999;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 17, cyto 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022355)
HIX0022355
HIT000213289 (
NM_145728
)
(Synemin; Desmuslin;)
genome : 99,645,286 - 99,675,800 (30,515)
query : 1 - 7,355 (7,355/7,355)
4 exons
identity = 1.000
5'(0.999;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 18, cyto 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022355)
HIX0022355
HIT000247053
(
AJ310521
)
(Synemin isoform B.)
genome : 99,645,286 - 99,675,788 (30,503)
query : 1 - 6,401 (6,401/6,401)
5 exons
identity = 0.994
5'(0.989;0.992;0.986;0.991;0.998)3'
coverage = 1.000
InterPro :
IPR001664 : Intermediate filament protein
IPR018039 : Intermediate filament protein, conserved site
GO :
0005198 : Molecular Function : structural molecule activity
0005882 : Cellular Component : intermediate filament
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 17, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022355)
HIX0022355
HIT000247054
(
AJ310522
)
(Synemin; Desmuslin;)
genome : 99,645,286 - 99,675,788 (30,503)
query : 1 - 7,337 (7,337/7,337)
4 exons
identity = 0.994
5'(0.989;0.992;0.986;0.995)3'
coverage = 1.000
InterPro :
IPR001664 : Intermediate filament protein
IPR018039 : Intermediate filament protein, conserved site
GO :
0005198 : Molecular Function : structural molecule activity
0005882 : Cellular Component : intermediate filament
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 17, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022355)
HIX0022355
HIT000249372
(
AJ697971
)
(Synemin; Desmuslin;)
genome : 99,645,286 - 99,675,788 (30,503)
query : 1 - 3,960 (3,960/3,960)
4 exons
identity = 0.996
5'(0.994;0.976;0.972;0.998)3'
coverage = 1.000
InterPro :
IPR001664 : Intermediate filament protein
IPR018039 : Intermediate filament protein, conserved site
GO :
0005198 : Molecular Function : structural molecule activity
0005882 : Cellular Component : intermediate filament
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15.5, nucl 10.5, extr 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022355)
HIX0022355
HIT000671699 (
ENST00000558420
)
(Synemin isoform B.)
genome : 99,645,286 - 99,675,788 (30,503)
query : 1 - 6,406 (6,406/6,406)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022355)
HIX0022355
HIT000674532 (
ENST00000561306
)
(Synemin isoform B.)
genome : 99,645,286 - 99,675,788 (30,503)
query : 1 - 3,959 (3,959/3,959)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022355)
HIX0022355
HIT000125669 (
ENST00000328642
)
(Synemin isoform B.)
genome : 99,645,286 - 99,675,770 (30,485)
query : 1 - 6,386 (6,386/6,386)
5 exons
identity = 1.000
5'(0.998;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 17, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022355)
HIX0022355
HIT000130022 (
ENST00000336292
)
(Synemin; Desmuslin;)
genome : 99,645,286 - 99,675,770 (30,485)
query : 1 - 7,322 (7,322/7,322)
4 exons
identity = 1.000
5'(0.998;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 18, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022355)
HIX0022355
HIT000705856 (
ENST00000594047
)
(Synemin isoform B.)
genome : 99,645,286 - 99,675,770 (30,485)
query : 1 - 6,389 (6,389/6,389)
5 exons
identity = 1.000
5'(0.999;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 17, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022355)
HIX0022355
HIT000078333
(
AF359284
)
(Synemin isoform B.)
genome : 99,645,295 - 99,673,328 (28,034)
query : 1 - 3,938 (3,938/3,938)
5 exons
identity = 0.998
5'(0.999;0.992;1.000;0.998;1.000)3'
coverage = 1.000
InterPro :
IPR001664 : Intermediate filament protein
IPR018039 : Intermediate filament protein, conserved site
GO :
0005198 : Molecular Function : structural molecule activity
0005882 : Cellular Component : intermediate filament
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 17, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022355)
HIX0172820
HIT000044873
(
AK125000
)
Representative transcript
(Synemin; Desmuslin;)
genome : 99,669,037 - 99,672,011 (2,975)
query : 1 - 2,561 (2,561/2,561)
2 exons
identity = 0.999
3'(0.998;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172820)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000007355
Pongo
sp. (Orangutan) : ENSPPYT00000008040
Pan
sp. (Chimpanzee) : ENSPTRT00000058277
HIX0172820
HIT000679997 (
ENST00000566974
)
(Conserved hypothetical protein.)
genome : 99,669,037 - 99,672,011 (2,975)
query : 1 - 2,562 (2,562/2,562)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172820)
HIX0172820
HIT000709565 (
ENST00000597789
)
(Conserved hypothetical protein.)
genome : 99,669,037 - 99,672,011 (2,975)
query : 1 - 2,562 (2,562/2,562)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172820)
HIX0022355
HIT000447943
(
DQ581412
)
(Non-protein coding transcript.)
genome : 99,670,739 - 99,670,769 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022355)
HIX0022355
HIT000009694
(
AK026420
)
(Synemin; Desmuslin;)
genome : 99,672,649 - 99,675,775 (3,127)
query : 10 - 3,136 (3,127/3,151)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.996
InterPro :
IPR001664 : Intermediate filament protein
GO :
0005198 : Molecular Function : structural molecule activity
0005882 : Cellular Component : intermediate filament
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022355)
HIX0022355
HIT000339446
(
BC110066
)
(Synemin; Desmuslin;)
genome : 99,673,034 - 99,673,320 (287)
query : 5 - 292 (288/292)
1 exon
identity = 0.990
5'(0.990)3'
coverage = 0.986
InterPro :
IPR001664 : Intermediate filament protein
GO :
0005198 : Molecular Function : structural molecule activity
0005882 : Cellular Component : intermediate filament
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 10, nucl 5, cyto_pero 5, cyto_plas 5,
cyto_golg 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022355)
HIX0022355
HIT000261152
(
BC063699
)
(Hypothetical protein.)
genome : 99,674,277 - 99,675,798 (1,522)
query : 1 - 1,522 (1,522/1,536)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14.5, cyto 8, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022355)
HIX0038514
HIT000322201
(
X58232
)
Representative transcript
(Non-protein coding transcript.)
genome : 99,674,793 - 99,674,925 (133)
query : 2 - 134 (133/135)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.985
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038514)
HIX0079658
HIT000071448
(
AF147375
)
Representative transcript
(Non-protein coding transcript.)
genome : 99,675,518 - 99,675,777 (260)
query : 10 - 269 (260/269)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079658)
HIX0022355
HIT000090584
(
BC022358
)
(Conserved hypothetical protein.)
genome : 99,675,587 - 99,675,798 (212)
query : 1 - 212 (212/389)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022355)
HIX0133989
HIT000466273
(
DQ599742
)
Representative transcript
(Non-protein coding transcript.)
genome : 99,675,997 - 99,676,027 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0133989)
HIX0133767
HIT000461488
(
DQ594957
)
Representative transcript
(Non-protein coding transcript.)
genome : 99,676,150 - 99,676,179 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0133767)
HIX0012609
HIT000037277
(
BC015728
)
(Tetratricopeptide repeat protein 23.)
genome : 99,676,528 - 99,789,723 (113,196)
query : 1 - 3,541 (3,541/3,599)
13 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;0.991;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013105 : Tetratricopeptide TPR2
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.5, cyto 10, cysk 10, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000330360
(
AK222580
)
(Tetratricopeptide repeat protein 23.)
genome : 99,676,528 - 99,758,824 (82,297)
query : 1 - 2,485 (2,485/2,512)
7 exons
identity = 0.996
3'(0.996;1.000;0.993;1.000;0.981;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 8, cyto_plas 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000243006
(
AF411456
)
Representative transcript
(Tetratricopeptide repeat protein 23.)
genome : 99,676,528 - 99,789,779 (113,252)
query : 17 - 3,883 (3,867/3,906)
14 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;0.991;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.998)5'
coverage = 0.996
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013105 : Tetratricopeptide TPR2
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 9.5, cysk 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC038179
Rattus
sp. (Rat) : BC097953
Bos
sp. (Cow) : BC112835
Monodelphis
sp. (Opossum) : ENSMODT00000016232
Pongo
sp. (Orangutan) : ENSPPYT00000008041
Tetraodon
sp. (Tetraodon) : GSTENT00035598001
Takifugu
sp. (Fugu) : SINFRUT00000182286
Macaca
sp. (Macaque) : XM_001101066
Pan
sp. (Chimpanzee) : XM_001138257
Equus
sp. (Horse) : XM_001489921
Canis
sp. (Dog) : XM_545827
Danio
sp. (Zebrafish) : XM_683316
HIX0012609
HIT000108249 (
ENST00000262074
)
(Tetratricopeptide repeat protein 23.)
genome : 99,676,528 - 99,789,815 (113,288)
query : 1 - 3,686 (3,686/3,686)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 9.5, cysk 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000208928 (
NM_022905
)
(Tetratricopeptide repeat protein 23.)
genome : 99,676,528 - 99,789,815 (113,288)
query : 1 - 3,562 (3,562/3,562)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 9.5, cysk 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000366794 (
NM_001040655
)
(Tetratricopeptide repeat protein 23.)
genome : 99,676,528 - 99,789,815 (113,288)
query : 1 - 3,808 (3,808/3,808)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 9.5, cysk 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000366795 (
NM_001040656
)
(Tetratricopeptide repeat protein 23.)
genome : 99,676,528 - 99,789,815 (113,288)
query : 1 - 3,491 (3,491/3,491)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 9.5, cysk 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000366796 (
NM_001040657
)
(Tetratricopeptide repeat protein 23.)
genome : 99,676,528 - 99,789,815 (113,288)
query : 1 - 3,440 (3,440/3,440)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 9.5, cysk 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000366797 (
NM_001040658
)
(Tetratricopeptide repeat protein 23.)
genome : 99,676,528 - 99,789,815 (113,288)
query : 1 - 3,367 (3,367/3,367)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 9.5, cysk 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000366798 (
NM_001040659
)
(Tetratricopeptide repeat protein 23.)
genome : 99,676,528 - 99,789,815 (113,288)
query : 1 - 3,245 (3,245/3,245)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 9.5, cysk 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000366799 (
NM_001040660
)
(Tetratricopeptide repeat protein 23.)
genome : 99,676,528 - 99,789,815 (113,288)
query : 1 - 3,686 (3,686/3,686)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 9.5, cysk 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000477555 (
ENST00000394136
)
(Tetratricopeptide repeat protein 23.)
genome : 99,676,528 - 99,789,815 (113,288)
query : 1 - 3,808 (3,808/3,808)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 9.5, cysk 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000671890 (
ENST00000558613
)
(Tetratricopeptide repeat protein 23.)
genome : 99,676,528 - 99,789,815 (113,288)
query : 1 - 3,491 (3,491/3,491)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 9.5, cysk 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000709013 (
ENST00000597233
)
(Tetratricopeptide repeat protein 23.)
genome : 99,676,528 - 99,789,815 (113,288)
query : 1 - 3,808 (3,808/3,808)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 9.5, cysk 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000710341 (
ENST00000598575
)
(Tetratricopeptide repeat protein 23.)
genome : 99,676,528 - 99,789,815 (113,288)
query : 1 - 3,491 (3,491/3,491)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 9.5, cysk 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000711283 (
ENST00000599529
)
(Tetratricopeptide repeat protein 23.)
genome : 99,676,528 - 99,789,815 (113,288)
query : 1 - 3,686 (3,686/3,686)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 9.5, cysk 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000477551 (
ENST00000394132
)
(Tetratricopeptide repeat protein 23.)
genome : 99,676,528 - 99,789,763 (113,236)
query : 1 - 3,849 (3,849/3,849)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 9.5, cysk 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000708159 (
ENST00000596370
)
(Tetratricopeptide repeat protein 23.)
genome : 99,676,528 - 99,789,763 (113,236)
query : 1 - 3,849 (3,849/3,849)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 9.5, cysk 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000564730 (
ENST00000459771
)
(Tetratricopeptide repeat protein 23.)
genome : 99,676,528 - 99,789,723 (113,196)
query : 1 - 3,538 (3,538/3,538)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.5, cyto 10, cysk 10, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000710949 (
ENST00000599189
)
(Tetratricopeptide repeat protein 23.)
genome : 99,676,528 - 99,789,723 (113,196)
query : 1 - 3,538 (3,538/3,538)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.5, cyto 10, cysk 10, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000005908
(
AK022634
)
(Tetratricopeptide repeat protein 23.)
genome : 99,676,529 - 99,758,828 (82,300)
query : 1 - 2,488 (2,488/2,488)
7 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;0.991;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11.5, mito 7, nucl 3.5,
E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000006275
(
AK023001
)
(Tetratricopeptide repeat protein 23.)
genome : 99,676,611 - 99,762,071 (85,461)
query : 17 - 2,973 (2,957/2,973)
8 exons
identity = 0.997
3'(0.996;1.000;1.000;1.000;0.991;1.000;1.000;
1.000)5'
coverage = 0.995
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, mito 8, cyto_golg 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000597963 (
ENST00000494567
)
(Tetratricopeptide repeat protein 23.)
genome : 99,676,611 - 99,762,069 (85,459)
query : 1 - 2,952 (2,952/2,952)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 7.5, cyto_nucl 6, nucl 3.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000713087 (
ENST00000601348
)
(Tetratricopeptide repeat protein 23.)
genome : 99,676,611 - 99,762,069 (85,459)
query : 1 - 2,952 (2,952/2,952)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 7.5, cyto_nucl 6, nucl 3.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000424487
(
AK291690
)
(Tetratricopeptide repeat protein 23.)
genome : 99,677,758 - 99,791,428 (113,671)
query : 1 - 2,068 (2,068/2,068)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.991;1.000;1.000;
1.000;1.000;1.000;0.989;1.000)5'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013105 : Tetratricopeptide TPR2
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 9.5, cysk 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000671938 (
ENST00000558663
)
(Tetratricopeptide repeat protein 23.)
genome : 99,677,758 - 99,791,428 (113,671)
query : 1 - 2,068 (2,068/2,068)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 9.5, cysk 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000709864 (
ENST00000598093
)
(Tetratricopeptide repeat protein 23.)
genome : 99,677,758 - 99,791,428 (113,671)
query : 1 - 2,068 (2,068/2,068)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 9.5, cysk 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000477554 (
ENST00000394135
)
(Tetratricopeptide repeat protein 23.)
genome : 99,677,781 - 99,791,428 (113,648)
query : 1 - 2,496 (2,496/2,496)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 9.5, cysk 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000706043 (
ENST00000594236
)
(Tetratricopeptide repeat protein 23.)
genome : 99,677,781 - 99,791,428 (113,648)
query : 1 - 2,496 (2,496/2,496)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 9.5, cysk 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000584393 (
ENST00000480371
)
(Tetratricopeptide repeat protein 23.)
genome : 99,677,845 - 99,696,504 (18,660)
query : 7 - 776 (770/776)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, extr 9, mito_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000707376 (
ENST00000595584
)
(Tetratricopeptide repeat protein 23.)
genome : 99,677,845 - 99,696,504 (18,660)
query : 7 - 776 (770/776)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, extr 9, mito_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000594235 (
ENST00000490688
)
(Conserved hypothetical protein.)
genome : 99,678,058 - 99,679,947 (1,890)
query : 1 - 701 (701/701)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 12, extr 10, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000711154 (
ENST00000599399
)
(Conserved hypothetical protein.)
genome : 99,678,058 - 99,679,947 (1,890)
query : 1 - 701 (701/701)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 12, extr 10, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000532528 (
ENST00000434594
)
(Tetratricopeptide repeat protein 23.)
genome : 99,678,147 - 99,715,325 (37,179)
query : 1 - 844 (844/844)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 9, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000710201 (
ENST00000598434
)
(Tetratricopeptide repeat protein 23.)
genome : 99,678,147 - 99,715,325 (37,179)
query : 1 - 844 (844/844)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 9, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0038339
HIT000093580
(
BC034816
)
Representative transcript
(Conserved hypothetical protein.)
genome : 99,679,522 - 99,685,580 (6,059)
query : 1 - 2,680 (2,680/2,700)
2 exons
identity = 0.997
5'(0.998;0.996)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 9, cyto_nucl 9, nucl 7, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038339)
HIX0038339
HIT000677643 (
ENST00000564527
)
(Conserved hypothetical protein.)
genome : 99,679,522 - 99,685,575 (6,054)
query : 1 - 2,677 (2,677/2,677)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 9, cyto_nucl 9, nucl 7, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038339)
HIX0038339
HIT000711408 (
ENST00000599656
)
(Conserved hypothetical protein.)
genome : 99,679,522 - 99,685,575 (6,054)
query : 1 - 2,677 (2,677/2,677)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 9, cyto_nucl 9, nucl 7, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038339)
HIX0012609
HIT000477549 (
ENST00000394130
)
(Tetratricopeptide repeat protein 23.)
genome : 99,679,634 - 99,789,815 (110,182)
query : 1 - 1,959 (1,959/1,959)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.5, cyto 10, cysk 10, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000708956 (
ENST00000597175
)
(Tetratricopeptide repeat protein 23.)
genome : 99,679,634 - 99,789,815 (110,182)
query : 1 - 1,959 (1,959/1,959)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.5, cyto 10, cysk 10, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000671717 (
ENST00000558438
)
(Tetratricopeptide repeat protein 23.)
genome : 99,688,717 - 99,696,484 (7,768)
query : 1 - 424 (424/424)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.5, nucl 9.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000712591 (
ENST00000600849
)
(Tetratricopeptide repeat protein 23.)
genome : 99,688,717 - 99,696,484 (7,768)
query : 1 - 424 (424/424)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.5, nucl 9.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000006504
(
AK023230
)
(Tetratricopeptide repeat protein 23.)
genome : 99,695,569 - 99,791,422 (95,854)
query : 1 - 2,505 (2,505/2,505)
12 exons
identity = 0.998
3'(0.999;1.000;0.991;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.994;0.984)5'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013105 : Tetratricopeptide TPR2
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10, cysk 10, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000477548 (
ENST00000394129
)
(Tetratricopeptide repeat protein 23.)
genome : 99,695,569 - 99,791,422 (95,854)
query : 1 - 2,505 (2,505/2,505)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10, cysk 10, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000706951 (
ENST00000595154
)
(Tetratricopeptide repeat protein 23.)
genome : 99,695,569 - 99,791,422 (95,854)
query : 1 - 2,505 (2,505/2,505)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10, cysk 10, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0026884
HIT000049592
(
AK130321
)
Representative transcript
(Conserved hypothetical protein.)
genome : 99,697,436 - 99,701,345 (3,910)
query : 1 - 3,908 (3,908/3,908)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 6.5, cyto_nucl 5.83333, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026884)
HIX0026884
HIT000676647 (
ENST00000563495
)
(Conserved hypothetical protein.)
genome : 99,697,436 - 99,701,345 (3,910)
query : 1 - 3,910 (3,910/3,910)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026884)
HIX0012609
HIT000674591 (
ENST00000561365
)
(Tetratricopeptide repeat protein 23.)
genome : 99,759,103 - 99,791,428 (32,326)
query : 1 - 544 (544/560)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.971
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 9, cyto_mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000710729 (
ENST00000598966
)
(Tetratricopeptide repeat protein 23.)
genome : 99,759,103 - 99,791,428 (32,326)
query : 1 - 544 (544/560)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.971
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 9, cyto_mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000673524 (
ENST00000560279
)
(Tetratricopeptide repeat protein 23.)
genome : 99,759,103 - 99,791,428 (32,326)
query : 1 - 666 (666/666)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000709181 (
ENST00000597402
)
(Tetratricopeptide repeat protein 23.)
genome : 99,759,103 - 99,791,428 (32,326)
query : 1 - 666 (666/666)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000674097 (
ENST00000560860
)
(Tetratricopeptide repeat protein 23.)
genome : 99,759,213 - 99,789,805 (30,593)
query : 1 - 549 (549/549)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 7, extr 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000707272 (
ENST00000595480
)
(Tetratricopeptide repeat protein 23.)
genome : 99,759,213 - 99,789,805 (30,593)
query : 1 - 549 (549/549)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 7, extr 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000674010 (
ENST00000560772
)
(Tetratricopeptide repeat protein 23.)
genome : 99,762,001 - 99,789,815 (27,815)
query : 1 - 585 (585/585)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 10, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000712744 (
ENST00000601002
)
(Tetratricopeptide repeat protein 23.)
genome : 99,762,001 - 99,789,815 (27,815)
query : 1 - 585 (585/585)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 10, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000573004 (
ENST00000468436
)
(Tetratricopeptide repeat protein 23.)
genome : 99,768,610 - 99,789,650 (21,041)
query : 1 - 357 (357/357)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 12.5, cyto 10.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000713471 (
ENST00000601734
)
(Tetratricopeptide repeat protein 23.)
genome : 99,768,610 - 99,789,650 (21,041)
query : 1 - 357 (357/357)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 12.5, cyto 10.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000671368 (
ENST00000558078
)
(Tetratricopeptide repeat protein 23.)
genome : 99,768,750 - 99,789,812 (21,063)
query : 1 - 574 (574/574)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 10, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000712623 (
ENST00000600881
)
(Tetratricopeptide repeat protein 23.)
genome : 99,768,750 - 99,789,812 (21,063)
query : 1 - 574 (574/574)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 10, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000673481 (
ENST00000560235
)
(Tetratricopeptide repeat protein 23.)
genome : 99,768,758 - 99,789,736 (20,979)
query : 1 - 581 (581/581)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000710831 (
ENST00000599068
)
(Tetratricopeptide repeat protein 23.)
genome : 99,768,758 - 99,789,736 (20,979)
query : 1 - 581 (581/581)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000594218 (
ENST00000490671
)
(Conserved hypothetical protein.)
genome : 99,781,592 - 99,789,763 (8,172)
query : 1 - 560 (560/560)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 2.5, cyto_nucl 2.5, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0012609
HIT000709848 (
ENST00000598077
)
(Conserved hypothetical protein.)
genome : 99,781,592 - 99,789,763 (8,172)
query : 1 - 560 (560/560)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 2.5, cyto_nucl 2.5, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012609)
HIX0221974
HIT000672153 (
ENST00000558879
)
(Conserved hypothetical protein.)
genome : 99,791,567 - 99,926,407 (134,841)
query : 1 - 581 (581/581)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221974)
HIX0221974
HIT000673459 (
ENST00000560213
)
(Conserved hypothetical protein.)
genome : 99,791,654 - 99,796,561 (4,908)
query : 1 - 552 (552/552)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, mito 10, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221974)
HIX0221974
HIT000671779 (
ENST00000558500
)
(Leucine-rich repeat containing protein.)
genome : 99,791,698 - 99,837,543 (45,846)
query : 1 - 561 (561/561)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 14, nucl 7.5, extr 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221974)
HIX0059400
HIT000727538 (
NR_073383
)
(Endoplasmin; 94 kDa glucose-regulated protein; GRP-94; Heat shock protein 90 kDa beta member 1; Tumor rejection antigen 1; gp96 homolog; Precursor;)
genome : 99,797,730 - 99,800,481 (2,752)
query : 1 - 2,752 (2,752/2,752)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, nucl 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059400)
HIX0059400
HIT000692962 (
ENST00000581052
)
(Non-protein coding transcript.)
genome : 99,797,744 - 99,797,875 (132)
query : 1 - 132 (132/132)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059400)
HIX0059400
HIT000672382 (
ENST00000559111
)
(Endoplasmin; 94 kDa glucose-regulated protein; GRP-94; Heat shock protein 90 kDa beta member 1; Tumor rejection antigen 1; gp96 homolog; Precursor;)
genome : 99,797,837 - 99,800,220 (2,384)
query : 1 - 2,384 (2,384/2,384)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059400)
HIX0059400
HIT000333308
(
AY956768
)
Representative transcript
(Putative endoplasmin-like protein; Putative heat shock protein 90 kDa beta member 2;)
genome : 99,798,849 - 99,800,225 (1,377)
query : 1 - 1,200 (1,200/1,200)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001404 : Heat shock protein Hsp90 family
IPR020568 : Ribosomal protein S5 domain 2-type fold
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0006950 : Biological Process : response to stress
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 16.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059400)
Ortholog candidate ( ->
Evola
)
Oryzias
sp. (Medaka) : ENSORLT00000005468
Rattus
sp. (Rat) : ENSRNOT00000059956
Tetraodon
sp. (Tetraodon) : GSTENT00029760001
Gallus
sp. (Chicken) : M14772
Takifugu
sp. (Fugu) : SINFRUT00000169573
Macaca
sp. (Macaque) : XR_012729
Pan
sp. (Chimpanzee) : XR_023038
HIX0194274
HIT000672637 (
ENST00000559372
)
(Conserved hypothetical protein.)
genome : 99,824,830 - 99,825,781 (952)
query : 1 - 952 (952/952)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 7, cyto 6.5, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194274)
HIX0194274
pHIT000025739 ( pHIT000025739 )
Representative transcript
(Conserved hypothetical protein.)
genome : 99,825,568 - 99,825,831 (264)
query : 1 - 264 (264/264)
1 exon
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194274)
CAGE tag :
H05BD64K2008
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001144633
HIX0222845
HIT000711948 (
ENST00000600203
)
(Conserved hypothetical protein.)
genome : 99,859,300 - 99,859,828 (529)
query : 1 - 81 (81/81)
2 exons
identity = 0.976
3'(1.000;0.957)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222845)
HIX0221974
HIT000671533 (
ENST00000558248
)
(Leucine-rich repeat containing protein.)
genome : 99,860,808 - 99,892,732 (31,925)
query : 1 - 499 (499/499)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 11, cyto 10, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221974)
HIX0221974
HIT000672164 (
ENST00000558890
)
(Leucine-rich repeat containing protein.)
genome : 99,866,718 - 99,903,598 (36,881)
query : 1 - 978 (978/978)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 10, cyto_nucl 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221974)
HIX0221974
HIT000047050
(
AK127177
)
Representative transcript
(Leucine-rich repeat containing protein.)
genome : 99,873,820 - 99,930,932 (57,113)
query : 1 - 2,710 (2,710/2,710)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.997;0.997)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, extr 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221974)
HIX0221974
HIT000673074 (
ENST00000559819
)
(Leucine-rich repeat containing protein.)
genome : 99,873,820 - 99,930,932 (57,113)
query : 1 - 2,712 (2,712/2,712)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, extr 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221974)
HIX0221974
HIT000673029 (
ENST00000559774
)
(Leucine-rich repeat containing protein.)
genome : 99,874,128 - 99,895,924 (21,797)
query : 1 - 624 (624/624)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 8.5, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221974)
HIX0221974
HIT000672184 (
ENST00000558911
)
(Conserved hypothetical protein.)
genome : 99,874,288 - 99,894,205 (19,918)
query : 1 - 490 (490/490)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 3.5, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221974)
HIX0222424
HIT000671641 (
ENST00000558361
)
(Conserved hypothetical protein.)
genome : 99,878,062 - 99,878,686 (625)
query : 1 - 625 (625/625)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8, E.R. 5.5, cyto_nucl 5.5, pero 5.5,
E.R._mito 5.33333, mito_pero 5.33333, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222424)
HIX0221974
HIT000673725 (
ENST00000560483
)
(Conserved hypothetical protein.)
genome : 99,901,201 - 99,901,716 (516)
query : 1 - 516 (516/535)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.964
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221974)
HIX0221974
HIT000673482 (
ENST00000560236
)
(Conserved hypothetical protein.)
genome : 99,903,430 - 99,928,474 (25,045)
query : 1 - 703 (703/703)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221974)
HIX0221974
HIT000674655 (
ENST00000561431
)
(Conserved hypothetical protein.)
genome : 99,924,499 - 99,926,500 (2,002)
query : 1 - 754 (754/754)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, mito 2, cyto_nucl 2, nucl 1.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221974)
HIX0222687
HIT000674588 (
ENST00000561362
)
(Hypothetical short protein.)
genome : 99,935,384 - 99,936,798 (1,415)
query : 1 - 323 (323/323)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222687)
HIX0222525
HIT000672831 (
ENST00000559569
)
(Hypothetical short protein.)
genome : 99,936,818 - 99,941,520 (4,703)
query : 1 - 198 (198/198)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222525)
HIX0222574
HIT000673352 (
ENST00000560103
)
(Hypothetical protein.)
genome : 99,967,214 - 99,971,233 (4,020)
query : 1 - 395 (395/395)
2 exons
identity = 0.990
3'(1.000;0.980)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 11, cyto 4, cyto_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222574)
HIX0012611
HIT000551162 (
ENST00000453228
)
(Myocyte-specific enhancer factor 2A isoform 2.)
genome : 100,017,370 - 100,256,627 (239,258)
query : 1 - 5,365 (5,365/5,365)
10 exons
identity = 1.000
5'(0.988;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0038233
HIT000076915
(
AF308290
)
Representative transcript
(Conserved hypothetical protein.)
genome : 100,038,019 - 100,038,580 (562)
query : 1 - 562 (562/567)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 13, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038233)
HIX0038233
HIT000707208 (
ENST00000595415
)
(Conserved hypothetical protein.)
genome : 100,038,447 - 100,038,578 (132)
query : 1 - 132 (132/132)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 13, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038233)
HIX0211896
HIT000575900 (
ENST00000471472
)
(Ribosomal protein L30, ferredoxin-like fold domain containing protein.)
genome : 100,091,587 - 100,092,322 (736)
query : 1 - 736 (736/736)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, mito 10, golg 3, extr 2, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211896)
HIX0012611
HIT000673735 (
ENST00000560493
)
(Myocyte-specific enhancer factor 2A;)
genome : 100,105,622 - 100,185,966 (80,345)
query : 1 - 732 (732/732)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000308709 (
ENST00000354410
)
(Myocyte-specific enhancer factor 2A; Serum response factor-like protein 1;)
genome : 100,105,905 - 100,256,671 (150,767)
query : 1 - 5,824 (5,824/5,824)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000202267 (
NM_005587
)
(Myocyte-specific enhancer factor 2A; Serum response factor-like protein 1;)
genome : 100,106,133 - 100,256,628 (150,496)
query : 1 - 5,553 (5,553/5,569)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000559811 (
NM_001130926
)
(Myocyte-specific enhancer factor 2A isoform 2.)
genome : 100,106,133 - 100,256,628 (150,496)
query : 1 - 5,465 (5,465/5,481)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000559812 (
NM_001130927
)
(Myocyte-specific enhancer factor 2A isoform 3.)
genome : 100,106,133 - 100,256,628 (150,496)
query : 1 - 5,285 (5,285/5,301)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000654839 (
NM_001171894
)
(Myocyte-specific enhancer factor 2A isoform 2.)
genome : 100,106,133 - 100,256,628 (150,496)
query : 1 - 5,755 (5,755/5,771)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000130747 (
ENST00000338042
)
(Myocyte-specific enhancer factor 2A isoform 2.)
genome : 100,106,133 - 100,256,627 (150,495)
query : 1 - 5,491 (5,491/5,491)
10 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.859;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000672086 (
ENST00000558812
)
(Myocyte-specific enhancer factor 2A isoform 3.)
genome : 100,106,133 - 100,253,529 (147,397)
query : 1 - 2,186 (2,186/2,186)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000672130 (
ENST00000558856
)
(Hypothetical short protein.)
genome : 100,106,133 - 100,197,736 (91,604)
query : 1 - 574 (574/574)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000328920
(
AB208985
)
Representative transcript
(Myocyte-specific enhancer factor 2A isoform 2.)
genome : 100,106,156 - 100,253,965 (147,810)
query : 1 - 3,069 (3,069/3,069)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.984;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002100 : Transcription factor, MADS-box
IPR022102 : Holliday junction regulator protein family C-terminal
GO :
0003677 : Molecular Function : DNA binding
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ010072
Danio
sp. (Zebrafish) : BC044337
Mus
sp. (Mouse) : BC061128
Bos
sp. (Cow) : BC133487
Pongo
sp. (Orangutan) : CR857398
Oryzias
sp. (Medaka) : ENSORLT00000010662
Tetraodon
sp. (Tetraodon) : GSTENT00035603001
Takifugu
sp. (Fugu) : SINFRUT00000171965
Macaca
sp. (Macaque) : XM_001102890
Pan
sp. (Chimpanzee) : XM_001139496
Monodelphis
sp. (Opossum) : XM_001372847
Equus
sp. (Horse) : XM_001489138
Canis
sp. (Dog) : XM_852945
HIX0012611
HIT000672307 (
ENST00000559036
)
(Myocyte-specific enhancer factor 2C isoform 5.)
genome : 100,106,174 - 100,186,036 (79,863)
query : 1 - 685 (685/685)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000671077 (
ENST00000557785
)
(Myocyte-specific enhancer factor 2A isoform 2.)
genome : 100,106,185 - 100,253,987 (147,803)
query : 1 - 2,854 (2,854/2,854)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000672255 (
ENST00000558983
)
(Myocyte-specific enhancer factor 2A;)
genome : 100,106,185 - 100,211,767 (105,583)
query : 1 - 847 (847/847)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000671339 (
ENST00000558049
)
(Conserved hypothetical protein.)
genome : 100,106,192 - 100,185,826 (79,635)
query : 1 - 565 (565/565)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 8, extr_plas 8, cyto_nucl 7.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000547211 (
ENST00000449277
)
(Myocyte-specific enhancer factor 2A isoform 4.)
genome : 100,106,195 - 100,256,611 (150,417)
query : 1 - 5,182 (5,182/5,182)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000488831
(
AK294207
)
(Myocyte-specific enhancer factor 2A isoform 3.)
genome : 100,106,195 - 100,253,529 (147,335)
query : 1 - 2,128 (2,128/2,128)
10 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.984;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR002100 : Transcription factor, MADS-box
IPR022102 : Holliday junction regulator protein family C-terminal
GO :
0003677 : Molecular Function : DNA binding
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000036274
(
BC013437
)
(Myocyte-specific enhancer factor 2A; Serum response factor-like protein 1;)
genome : 100,106,215 - 100,253,852 (147,638)
query : 1 - 2,698 (2,698/2,712)
11 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR002100 : Transcription factor, MADS-box
IPR022102 : Holliday junction regulator protein family C-terminal
GO :
0003677 : Molecular Function : DNA binding
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000424632
(
AK291835
)
(Myocyte-specific enhancer factor 2A isoform 2.)
genome : 100,106,223 - 100,253,138 (146,916)
query : 1 - 1,879 (1,879/1,879)
10 exons
identity = 0.995
5'(1.000;0.995;1.000;1.000;1.000;1.000;1.000;
0.984;1.000;0.987)3'
coverage = 1.000
InterPro :
IPR002100 : Transcription factor, MADS-box
IPR022102 : Holliday junction regulator protein family C-terminal
GO :
0003677 : Molecular Function : DNA binding
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000322929
(
X68504
)
(Non-protein coding transcript.)
genome : 100,106,257 - 100,173,324 (67,068)
query : 1 - 277 (277/277)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000673157 (
ENST00000559903
)
(Myocyte-specific enhancer factor 2A;)
genome : 100,106,688 - 100,185,944 (79,257)
query : 1 - 574 (574/574)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000026907
(
AL831995
)
(Myocyte-specific enhancer factor 2A isoform 2.)
genome : 100,138,631 - 100,256,609 (117,979)
query : 35 - 5,391 (5,357/5,411)
11 exons
identity = 0.992
5'(0.988;0.995;1.000;1.000;1.000;1.000;0.995;
1.000;0.992;1.000;0.990)3'
coverage = 0.994
InterPro :
IPR002100 : Transcription factor, MADS-box
IPR022102 : Holliday junction regulator protein family C-terminal
GO :
0003677 : Molecular Function : DNA binding
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000671232 (
ENST00000557942
)
(Myocyte-specific enhancer factor 2A isoform 2.)
genome : 100,138,631 - 100,256,629 (117,999)
query : 15 - 5,413 (5,399/5,413)
11 exons
identity = 1.000
5'(0.988;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000322587
(
X63381
)
(Myocyte-specific enhancer factor 2A; Serum response factor-like protein 1;)
genome : 100,138,634 - 100,253,987 (115,354)
query : 4 - 2,733 (2,730/2,733)
10 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.984;1.000;0.995)3'
coverage = 0.999
InterPro :
IPR002100 : Transcription factor, MADS-box
IPR022102 : Holliday junction regulator protein family C-terminal
GO :
0003677 : Molecular Function : DNA binding
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000325933
(
Y16312
)
(Myocyte-specific enhancer factor 2A isoform 2.)
genome : 100,138,634 - 100,253,987 (115,354)
query : 4 - 2,727 (2,724/2,727)
10 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.984;1.000;0.995)3'
coverage = 0.999
InterPro :
IPR002100 : Transcription factor, MADS-box
IPR022102 : Holliday junction regulator protein family C-terminal
GO :
0003677 : Molecular Function : DNA binding
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000322930
(
X68505
)
(Myocyte-specific enhancer factor 2A; Serum response factor-like protein 1;)
genome : 100,138,662 - 100,254,001 (115,340)
query : 1 - 2,967 (2,967/2,975)
12 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.984;1.000;0.996)3'
coverage = 0.997
InterPro :
IPR002100 : Transcription factor, MADS-box
IPR022102 : Holliday junction regulator protein family C-terminal
GO :
0003677 : Molecular Function : DNA binding
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000559813 (
NM_001130928
)
(Myocyte-specific enhancer factor 2A isoform 4.)
genome : 100,173,183 - 100,256,628 (83,446)
query : 1 - 5,084 (5,084/5,100)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.992;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000054003
(
BC053871
)
(Myocyte-specific enhancer factor 2A isoform 4.)
genome : 100,173,211 - 100,256,609 (83,399)
query : 1 - 5,040 (5,040/5,054)
8 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;0.984;1.000;
0.997)3'
coverage = 1.000
InterPro :
IPR002100 : Transcription factor, MADS-box
IPR022102 : Holliday junction regulator protein family C-terminal
GO :
0003677 : Molecular Function : DNA binding
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000322928
(
X68503
)
(Myocyte-specific enhancer factor 2A;)
genome : 100,211,528 - 100,211,659 (132)
query : 1 - 132 (132/132)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 10, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0012611
HIT000674355 (
ENST00000561125
)
(Myocyte-specific enhancer factor 2A; Serum response factor-like protein 1;)
genome : 100,246,800 - 100,253,041 (6,242)
query : 1 - 835 (835/835)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 11, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012611)
HIX0222267
HIT000360184 (
ENST00000378904
)
(Conserved hypothetical protein.)
genome : 100,255,908 - 100,258,029 (2,122)
query : 1 - 2,122 (2,122/2,122)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 9.5, cyto_nucl 8.5, cyto 6.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222267)
HIX0012612
HIT000052505
(
BC041097
)
Representative transcript
(Conserved hypothetical protein.)
genome : 100,267,613 - 100,273,626 (6,014)
query : 1 - 2,882 (2,882/2,929)
6 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 25, plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012612)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB179061
Mus
sp. (Mouse) : AK015716
Danio
sp. (Zebrafish) : BC062528
Bos
sp. (Cow) : BC133419
Pongo
sp. (Orangutan) : CR857478
Equus
sp. (Horse) : ENSECAT00000000317
Pan
sp. (Chimpanzee) : XM_001140749
Monodelphis
sp. (Opossum) : XM_001372904
Danio
sp. (Zebrafish) : XM_001922361
Gallus
sp. (Chicken) : XM_425084
Canis
sp. (Dog) : XM_545826
HIX0012612
HIT000317859 (
NM_152449
)
(Conserved hypothetical protein.)
genome : 100,267,613 - 100,273,626 (6,014)
query : 1 - 2,882 (2,882/2,929)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 24, plas 4, nucl 2, extr_plas 2, cysk_plas 2,
cyto_plas 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012612)
HIX0012612
HIT000266054
(
BC084545
)
(LysM domain containing protein.)
genome : 100,267,616 - 100,273,544 (5,929)
query : 14 - 2,679 (2,666/2,712)
3 exons
identity = 0.997
3'(0.997;1.000;1.000)5'
coverage = 0.995
InterPro :
IPR018392 : LysM domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, mito_pero 6.33333, E.R._mito 5.66667, mito 5,
pero 5, plas 2, extr 2, E.R. 2, extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012612)
HIX0012612
HIT000137421 (
ENST00000344791
)
(Conserved hypothetical protein.)
genome : 100,267,610 - 100,273,626 (6,017)
query : 1 - 2,885 (2,885/2,885)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 24, plas 4, nucl 2, extr_plas 2, cysk_plas 2,
cyto_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012612)
HIX0012612
HIT000507821 (
ENST00000409796
)
(LysM domain containing protein.)
genome : 100,267,610 - 100,273,544 (5,935)
query : 1 - 2,672 (2,672/2,672)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, mito_pero 6.33333, E.R._mito 5.66667, mito 5,
pero 5, plas 2, extr 2, E.R. 2, extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012612)
HIX0012612
HIT000127956 (
ENST00000332728
)
(LysM domain containing protein.)
genome : 100,267,614 - 100,273,626 (6,013)
query : 1 - 2,790 (2,790/2,790)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, mito_pero 6.33333, E.R._mito 5.66667, mito 5,
pero 5, plas 2, extr 2, E.R. 2, extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012612)
HIX0012612
HIT000044725
(
AK124852
)
(Conserved hypothetical protein.)
genome : 100,267,614 - 100,273,592 (5,979)
query : 1 - 3,042 (3,042/3,042)
4 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 19, E.R._mito 4.83333, mito_pero 3.83333,
pero 3.5, E.R. 3, plas 2, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012612)
HIX0012612
HIT000644066 (
ENST00000545021
)
(Conserved hypothetical protein.)
genome : 100,267,614 - 100,273,592 (5,979)
query : 1 - 3,042 (3,042/3,042)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 19, E.R._mito 4.83333, mito_pero 3.83333,
pero 3.5, E.R. 3, plas 2, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012612)
HIX0012612
HIT000583837 (
ENST00000479791
)
(Conserved hypothetical protein.)
genome : 100,267,614 - 100,272,214 (4,601)
query : 1 - 3,001 (3,001/3,001)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 19, E.R._mito 4.83333, mito_pero 3.83333,
pero 3.5, E.R. 3, plas 2, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012612)
HIX0012612
HIT000014184
(
AK057570
)
(Conserved hypothetical protein.)
genome : 100,267,614 - 100,269,861 (2,248)
query : 1 - 2,248 (2,248/2,248)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 8.5, plas 6, mito 5,
E.R._mito 4.5, pero 3, extr_plas 3, cysk_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012612)
HIX0012612
HIT000423093
(
AK290296
)
(LysM domain containing protein.)
genome : 100,269,252 - 100,273,635 (4,384)
query : 1 - 1,061 (1,061/1,061)
3 exons
identity = 0.994
3'(0.994;1.000;0.977)5'
coverage = 1.000
InterPro :
IPR018392 : LysM domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, mito_pero 6.33333, E.R._mito 5.66667, mito 5,
pero 5, plas 2, extr 2, E.R. 2, extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012612)
HIX0012612
HIT000596703 (
ENST00000493256
)
(Conserved hypothetical protein.)
genome : 100,269,587 - 100,273,566 (3,980)
query : 1 - 880 (880/880)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 7.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012612)
HIX0012612
HIT000587915 (
ENST00000484050
)
(LysM and putative peptidoglycan-binding domain-containing protein 3;)
genome : 100,269,703 - 100,273,766 (4,064)
query : 1 - 551 (551/551)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012612)
HIX0012612
HIT000548446 (
ENST00000450512
)
(LysM and putative peptidoglycan-binding domain-containing protein 3;)
genome : 100,269,837 - 100,273,642 (3,806)
query : 1 - 559 (559/559)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012612)
HIX0012614
HIT000047707
(
AK127834
)
Representative transcript
(Putative golgin subfamily A member 2B; Golgin subfamily A member 2-like protein 1;)
genome : 100,330,361 - 100,347,132 (16,772)
query : 1 - 3,831 (3,831/3,831)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR020850 : GTPase effector domain, GED
IPR022812 : Dynamin superfamily
IPR027741 : Dynamin-1
GO :
0003924 : Molecular Function : GTPase activity
0005874 : Cellular Component : microtubule
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.3333, mito 9,
cyto_pero 7.33333, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000497341
(
AK302717
)
(Dynamin-1; EC=3.6.5.5;)
genome : 100,331,042 - 100,347,100 (16,059)
query : 2 - 2,951 (2,950/3,059)
5 exons
identity = 0.995
3'(0.995;1.000;0.977;1.000;0.990)5'
coverage = 0.964
EC number :
EC 3.6.5.5
InterPro :
IPR003130 : Dynamin GTPase effector
IPR020850 : GTPase effector domain, GED
IPR022812 : Dynamin superfamily
IPR027741 : Dynamin-1
GO :
0003924 : Molecular Function : GTPase activity
0005525 : Molecular Function : GTP binding
0005874 : Cellular Component : microtubule
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, cyto 13.5, nucl 11.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000028785
(
AL833912
)
(Dynamin-1; EC=3.6.5.5;)
genome : 100,330,989 - 100,347,114 (16,126)
query : 1 - 3,058 (3,058/3,103)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.5.5
InterPro :
IPR020850 : GTPase effector domain, GED
IPR022812 : Dynamin superfamily
IPR027741 : Dynamin-1
GO :
0003924 : Molecular Function : GTPase activity
0005874 : Cellular Component : microtubule
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, mito 12, cyto_nucl 11, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000437052
(
DQ570521
)
(Non-protein coding transcript.)
genome : 100,331,258 - 100,331,287 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000466671
(
DQ600140
)
(Non-protein coding transcript.)
genome : 100,331,260 - 100,331,288 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000437437_03
(
DQ570906
)
(Non-protein coding transcript.)
genome : 100,331,284 - 100,331,314 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000447090
(
DQ580559
)
(Non-protein coding transcript.)
genome : 100,331,287 - 100,331,316 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000447042
(
DQ580511
)
(Non-protein coding transcript.)
genome : 100,331,302 - 100,331,331 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000447043
(
DQ580512
)
(Non-protein coding transcript.)
genome : 100,331,302 - 100,331,331 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000447045
(
DQ580514
)
(Non-protein coding transcript.)
genome : 100,331,302 - 100,331,331 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000455828
(
DQ589297
)
(Non-protein coding transcript.)
genome : 100,331,312 - 100,331,341 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0211888
HIT000671249 (
ENST00000557959
)
(Conserved hypothetical protein.)
genome : 100,331,332 - 100,333,052 (1,721)
query : 1 - 739 (739/739)
4 exons
identity = 0.995
5'(1.000;1.000;0.992;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 10.5, extr 7, cyto 6.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211888)
HIX0012614
HIT000462417
(
DQ595886
)
(Non-protein coding transcript.)
genome : 100,331,364 - 100,331,393 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000440607
(
DQ574076
)
(Non-protein coding transcript.)
genome : 100,331,396 - 100,331,426 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0211888
HIT000567475 (
ENST00000462651
)
(Hypothetical short protein.)
genome : 100,331,397 - 100,331,649 (253)
query : 1 - 253 (253/253)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211888)
HIX0012614
HIT000450627
(
DQ584096
)
(Non-protein coding transcript.)
genome : 100,331,455 - 100,331,484 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000446323_03
(
DQ579792
)
(Non-protein coding transcript.)
genome : 100,331,523 - 100,331,554 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000451724_03
(
DQ585193
)
(Non-protein coding transcript.)
genome : 100,331,532 - 100,331,560 (29)
query : 3 - 31 (29/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.935
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000466676
(
DQ600145
)
(Non-protein coding transcript.)
genome : 100,331,561 - 100,331,591 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000462469
(
DQ595938
)
(Non-protein coding transcript.)
genome : 100,331,593 - 100,331,622 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000441078
(
DQ574547
)
(Non-protein coding transcript.)
genome : 100,331,750 - 100,331,779 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000441077
(
DQ574546
)
(Non-protein coding transcript.)
genome : 100,331,750 - 100,331,779 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000460316
(
DQ593785
)
(Non-protein coding transcript.)
genome : 100,331,784 - 100,331,814 (31)
query : 2 - 32 (31/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000444023_04
(
DQ577492
)
(Non-protein coding transcript.)
genome : 100,331,801 - 100,331,832 (32)
query : 1 - 32 (32/32)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000441241_04
(
DQ574710
)
(Non-protein coding transcript.)
genome : 100,331,801 - 100,331,830 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000460127
(
DQ593596
)
(Non-protein coding transcript.)
genome : 100,331,803 - 100,331,831 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000463009_03
(
DQ596478
)
(Non-protein coding transcript.)
genome : 100,331,914 - 100,331,942 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000453156
(
DQ586625
)
(Non-protein coding transcript.)
genome : 100,331,932 - 100,331,961 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000456965
(
DQ590434
)
(Non-protein coding transcript.)
genome : 100,331,953 - 100,331,982 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000445238
(
DQ578707
)
(Non-protein coding transcript.)
genome : 100,331,957 - 100,331,987 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000445237
(
DQ578706
)
(Non-protein coding transcript.)
genome : 100,331,958 - 100,331,987 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000448979_13
(
DQ582448
)
(Non-protein coding transcript.)
genome : 100,331,962 - 100,331,991 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000439514_14
(
DQ572983
)
(Non-protein coding transcript.)
genome : 100,331,966 - 100,331,994 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000439515_14
(
DQ572984
)
(Non-protein coding transcript.)
genome : 100,331,965 - 100,331,994 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000439516_14
(
DQ572985
)
(Non-protein coding transcript.)
genome : 100,331,966 - 100,331,994 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000456463_12
(
DQ589932
)
(Non-protein coding transcript.)
genome : 100,331,968 - 100,331,997 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000458891_12
(
DQ592360
)
(Non-protein coding transcript.)
genome : 100,331,971 - 100,332,000 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000444731_03
(
DQ578200
)
(Non-protein coding transcript.)
genome : 100,331,973 - 100,332,002 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000465065_03
(
DQ598534
)
(Non-protein coding transcript.)
genome : 100,331,977 - 100,332,007 (31)
query : 1 - 31 (31/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000450484_03
(
DQ583953
)
(Non-protein coding transcript.)
genome : 100,331,976 - 100,332,006 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000450485_03
(
DQ583954
)
(Non-protein coding transcript.)
genome : 100,331,977 - 100,332,006 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000450483_03
(
DQ583952
)
(Non-protein coding transcript.)
genome : 100,331,977 - 100,332,006 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000438003_03
(
DQ571472
)
(Non-protein coding transcript.)
genome : 100,331,980 - 100,332,008 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000455836
(
DQ589305
)
(Non-protein coding transcript.)
genome : 100,331,991 - 100,332,021 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000455835
(
DQ589304
)
(Non-protein coding transcript.)
genome : 100,331,992 - 100,332,021 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000442231
(
DQ575700
)
(Non-protein coding transcript.)
genome : 100,331,997 - 100,332,026 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000442232
(
DQ575701
)
(Non-protein coding transcript.)
genome : 100,331,997 - 100,332,026 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000460986
(
DQ594455
)
(Non-protein coding transcript.)
genome : 100,331,998 - 100,332,027 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000468212
(
DQ601681
)
(Non-protein coding transcript.)
genome : 100,332,046 - 100,332,075 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000462126
(
DQ595595
)
(Non-protein coding transcript.)
genome : 100,332,051 - 100,332,078 (28)
query : 1 - 28 (28/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.933
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000461327
(
DQ594796
)
(Non-protein coding transcript.)
genome : 100,332,052 - 100,332,081 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000453734_03
(
DQ587203
)
(Non-protein coding transcript.)
genome : 100,332,090 - 100,332,119 (30)
query : 2 - 31 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000459871_03
(
DQ593340
)
(Non-protein coding transcript.)
genome : 100,332,090 - 100,332,120 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000459872_03
(
DQ593341
)
(Non-protein coding transcript.)
genome : 100,332,091 - 100,332,120 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000463987_03
(
DQ597456
)
(Non-protein coding transcript.)
genome : 100,332,092 - 100,332,121 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000463988_03
(
DQ597457
)
(Non-protein coding transcript.)
genome : 100,332,091 - 100,332,121 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000459870_03
(
DQ593339
)
(Non-protein coding transcript.)
genome : 100,332,091 - 100,332,120 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000463986_03
(
DQ597455
)
(Non-protein coding transcript.)
genome : 100,332,092 - 100,332,121 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000452357
(
DQ585826
)
(Non-protein coding transcript.)
genome : 100,332,146 - 100,332,175 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000454152_15
(
DQ587621
)
(Non-protein coding transcript.)
genome : 100,332,161 - 100,332,190 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000455624
(
DQ589093
)
(Non-protein coding transcript.)
genome : 100,332,191 - 100,332,220 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000441305_03
(
DQ574774
)
(Non-protein coding transcript.)
genome : 100,332,385 - 100,332,414 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000461162
(
DQ594631
)
(Non-protein coding transcript.)
genome : 100,332,434 - 100,332,463 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000454498
(
DQ587967
)
(Non-protein coding transcript.)
genome : 100,332,487 - 100,332,516 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0211888
HIT000506672 (
ENST00000408584
)
(Non-protein coding transcript.)
genome : 100,332,502 - 100,332,584 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211888)
HIX0012614
HIT000439888
(
DQ573357
)
(Non-protein coding transcript.)
genome : 100,332,536 - 100,332,566 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000465041
(
DQ598510
)
(Non-protein coding transcript.)
genome : 100,332,567 - 100,332,596 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000465042
(
DQ598511
)
(Non-protein coding transcript.)
genome : 100,332,567 - 100,332,596 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000437885
(
DQ571354
)
(Non-protein coding transcript.)
genome : 100,332,570 - 100,332,599 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000468235
(
DQ601704
)
(Non-protein coding transcript.)
genome : 100,332,571 - 100,332,600 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000443832
(
DQ577301
)
(Non-protein coding transcript.)
genome : 100,332,572 - 100,332,602 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000443834
(
DQ577303
)
(Non-protein coding transcript.)
genome : 100,332,572 - 100,332,602 (31)
query : 1 - 31 (31/31)
1 exon
identity = 0.968
3'(0.968)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000443833
(
DQ577302
)
(Non-protein coding transcript.)
genome : 100,332,574 - 100,332,602 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000464564
(
DQ598033
)
(Non-protein coding transcript.)
genome : 100,332,582 - 100,332,610 (29)
query : 1 - 29 (29/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.935
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000462431
(
DQ595900
)
(Non-protein coding transcript.)
genome : 100,332,597 - 100,332,626 (30)
query : 1 - 30 (30/31)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000437536_03
(
DQ571005
)
(Non-protein coding transcript.)
genome : 100,332,630 - 100,332,659 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000455598
(
DQ589067
)
(Non-protein coding transcript.)
genome : 100,332,636 - 100,332,665 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000457653_04
(
DQ591122
)
(Non-protein coding transcript.)
genome : 100,332,640 - 100,332,670 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000464153_03
(
DQ597622
)
(Non-protein coding transcript.)
genome : 100,332,725 - 100,332,754 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000440091_03
(
DQ573560
)
(Non-protein coding transcript.)
genome : 100,332,728 - 100,332,757 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000459898
(
DQ593367
)
(Non-protein coding transcript.)
genome : 100,332,818 - 100,332,847 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0211888
HIT000436789
(
DQ570258
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,332,832 - 100,332,863 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211888)
HIX0012614
HIT000460112_03
(
DQ593581
)
(Non-protein coding transcript.)
genome : 100,332,844 - 100,332,874 (31)
query : 1 - 31 (31/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000440296_03
(
DQ573765
)
(Non-protein coding transcript.)
genome : 100,332,844 - 100,332,873 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000460111_03
(
DQ593580
)
(Non-protein coding transcript.)
genome : 100,332,844 - 100,332,874 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000460113_03
(
DQ593582
)
(Non-protein coding transcript.)
genome : 100,332,845 - 100,332,874 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000440288_03
(
DQ573757
)
(Non-protein coding transcript.)
genome : 100,332,844 - 100,332,873 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000464537_03
(
DQ598006
)
(Non-protein coding transcript.)
genome : 100,332,847 - 100,332,876 (30)
query : 1 - 30 (30/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.938
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000460110_03
(
DQ593579
)
(Non-protein coding transcript.)
genome : 100,332,845 - 100,332,874 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000453397_03
(
DQ586866
)
(Non-protein coding transcript.)
genome : 100,332,853 - 100,332,883 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000443781
(
DQ577250
)
(Non-protein coding transcript.)
genome : 100,332,908 - 100,332,938 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000437179
(
DQ570648
)
(Non-protein coding transcript.)
genome : 100,332,910 - 100,332,940 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000451558_03
(
DQ585027
)
(Non-protein coding transcript.)
genome : 100,332,921 - 100,332,949 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000451559_03
(
DQ585028
)
(Non-protein coding transcript.)
genome : 100,332,920 - 100,332,949 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000446877_03
(
DQ580346
)
(Non-protein coding transcript.)
genome : 100,332,951 - 100,332,981 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000450357_03
(
DQ583826
)
(Non-protein coding transcript.)
genome : 100,332,956 - 100,332,986 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000442296_03
(
DQ575765
)
(Non-protein coding transcript.)
genome : 100,332,963 - 100,332,992 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000444986_03
(
DQ578455
)
(Non-protein coding transcript.)
genome : 100,332,986 - 100,333,016 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000448496_03
(
DQ581965
)
(Non-protein coding transcript.)
genome : 100,332,995 - 100,333,024 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000448497_03
(
DQ581966
)
(Non-protein coding transcript.)
genome : 100,332,996 - 100,333,024 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000439398_03
(
DQ572867
)
(Non-protein coding transcript.)
genome : 100,332,997 - 100,333,025 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000439399_03
(
DQ572868
)
(Non-protein coding transcript.)
genome : 100,332,996 - 100,333,025 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000439400_03
(
DQ572869
)
(Non-protein coding transcript.)
genome : 100,332,997 - 100,333,025 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0012614
HIT000449157_03
(
DQ582626
)
(Non-protein coding transcript.)
genome : 100,332,997 - 100,333,024 (28)
query : 2 - 29 (28/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.933
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0172949
HIT000447181_03
(
DQ580650
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,333,839 - 100,333,869 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172949)
HIX0173082
HIT000468277_06
(
DQ601746
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,333,892 - 100,333,921 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173082)
HIX0211715
HIT000441473_11
(
DQ574942
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,334,315 - 100,334,345 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211715)
HIX0173053
HIT000465284_03
(
DQ598753
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,335,320 - 100,335,349 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173053)
HIX0172964
HIT000450067_03
(
DQ583536
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,335,597 - 100,335,626 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172964)
HIX0211861
HIT000463780_11
(
DQ597249
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,336,029 - 100,336,060 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211861)
HIX0172992
HIT000457171_03
(
DQ590640
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,336,295 - 100,336,324 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172992)
HIX0172744
HIT000459417_03
(
DQ592886
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,336,636 - 100,336,665 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172744)
HIX0172872
HIT000438097_12
(
DQ571566
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,336,694 - 100,336,723 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172872)
HIX0173061
HIT000466125_03
(
DQ599594
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,337,011 - 100,337,040 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173061)
HIX0211695
HIT000436637_10
(
DQ570106
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,337,111 - 100,337,140 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211695)
HIX0173037
HIT000463545_03
(
DQ597014
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,337,492 - 100,337,520 (29)
query : 2 - 30 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173037)
HIX0173050
HIT000464589_17
(
DQ598058
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,337,685 - 100,337,715 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173050)
HIX0172718
HIT000446171_03
(
DQ579640
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,337,925 - 100,337,955 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172718)
HIX0172897
HIT000441261_03
(
DQ574730
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,338,158 - 100,338,188 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172897)
HIX0172703
HIT000441815_09
(
DQ575284
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,339,393 - 100,339,423 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172703)
HIX0132093
HIT000443865_03
(
DQ577334
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,339,441 - 100,339,470 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0132093)
HIX0172990
HIT000456925_09
(
DQ590394
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,339,646 - 100,339,675 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172990)
HIX0173023
HIT000461745_03
(
DQ595214
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,339,716 - 100,339,746 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173023)
HIX0211834
HIT000460162_02
(
DQ593631
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,339,994 - 100,340,023 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211834)
HIX0222286
HIT000464070_03
(
DQ597539
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,340,026 - 100,340,056 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222286)
HIX0211552
HIT000442273_02
(
DQ575742
)
(Non-protein coding transcript.)
genome : 100,340,119 - 100,340,148 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211552)
HIX0211552
HIT000462025_02
(
DQ595494
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,340,137 - 100,340,167 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211552)
HIX0211853
HIT000463681_02
(
DQ597150
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,340,323 - 100,340,353 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211853)
HIX0026861
HIT000047293
(
AK127420
)
Representative transcript
(Conserved hypothetical protein.)
genome : 100,346,730 - 100,353,871 (7,142)
query : 1 - 1,932 (1,932/1,932)
3 exons
identity = 0.997
5'(0.993;1.000;0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11, nucl 7.5, mito 5.5,
mito_pero 5, pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026861)
HIX0026861
HIT000672969 (
ENST00000559714
)
(Ubiquitin-conjugating enzyme E2 Q2 isoform 2.)
genome : 100,347,228 - 100,417,353 (70,126)
query : 1 - 542 (542/542)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.19
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 7.5, cyto_nucl 6.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026861)
HIX0026861
HIT000673309 (
ENST00000560059
)
(Ubiquitin-conjugating enzyme E2 Q2 isoform 2.)
genome : 100,347,264 - 100,379,270 (32,007)
query : 1 - 665 (665/665)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.19
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 7.5, cyto_nucl 6.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026861)
HIX0026861
HIT000671475 (
ENST00000558188
)
(Ubiquitin-conjugating enzyme E2 Q2 isoform 2.)
genome : 100,348,193 - 100,417,310 (69,118)
query : 1 - 582 (582/582)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.19
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 7.5, cyto_nucl 6.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026861)
HIX0132561
HIT000627868 (
ENST00000528696
)
(Hypothetical short protein.)
genome : 100,510,420 - 100,514,215 (3,796)
query : 1 - 572 (572/572)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0132561)
HIX0012615
HIT000212664 (
NM_139057
)
(A disintegrin and metalloproteinase with thrombospondin motifs 17; ADAM-TS 17; ADAM-TS17; ADAMTS-17; EC=3.4.24.-; Precursor;)
genome : 100,511,643 - 100,882,183 (370,541)
query : 1 - 6,331 (6,331/6,331)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 15, extr_plas 10, E.R. 7, nucl 4, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012615)
HIX0132561
HIT000014143
(
AK057529
)
Representative transcript
(Conserved hypothetical protein.)
genome : 100,511,643 - 100,513,502 (1,860)
query : 1 - 1,857 (1,857/1,857)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 8, nucl 5, extr 4, cyto_pero 4,
cyto_plas 4, cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0132561)
HIX0012615
HIT000110247 (
ENST00000268070
)
(A disintegrin and metalloproteinase with thrombospondin motifs 17; ADAM-TS 17; ADAM-TS17; ADAMTS-17; EC=3.4.24.-; Precursor;)
genome : 100,511,794 - 100,882,210 (370,417)
query : 1 - 6,207 (6,207/6,207)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 15, extr_plas 10, E.R. 7, nucl 4, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012615)
HIX0012615
HIT000671186 (
ENST00000557896
)
(A disintegrin and metalloproteinase with thrombospondin motifs 19; ADAM-TS 19; ADAM-TS19; ADAMTS-19; EC=3.4.24.-; Precursor;)
genome : 100,513,161 - 100,516,484 (3,324)
query : 1 - 1,745 (1,745/1,745)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012615)
HIX0012615
HIT000013945
(
AK057331
)
(A disintegrin and metalloproteinase with thrombospondin motifs 17; ADAM-TS 17; ADAM-TS17; ADAMTS-17; EC=3.4.24.-; Precursor;)
genome : 100,513,161 - 100,516,476 (3,316)
query : 1 - 1,737 (1,737/1,737)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
InterPro :
IPR000884 : Thrombospondin, type 1 repeat
IPR010909 : PLAC
GO :
0008233 : Molecular Function : peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012615)
HIX0012615
HIT000247177
(
AJ315735
)
Representative transcript
(A disintegrin and metalloproteinase with thrombospondin motifs 17; ADAM-TS 17; ADAM-TS17; ADAMTS-17; EC=3.4.24.-; Precursor;)
genome : 100,514,517 - 100,882,127 (367,611)
query : 1 - 3,401 (3,401/3,403)
22 exons
identity = 0.999
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 3.4.24.-
InterPro :
IPR000884 : Thrombospondin, type 1 repeat
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR002870 : Peptidase M12B, propeptide
IPR010294 : ADAM-TS Spacer 1
IPR010909 : PLAC
IPR013273 : Peptidase M12B, ADAM-TS
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005578 : Cellular Component : proteinaceous extracellular matrix
0006508 : Biological Process : proteolysis
0008233 : Molecular Function : peptidase activity
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
0031012 : Cellular Component : extracellular matrix
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 15.5, extr_plas 10.5, E.R. 7, nucl 5, extr 2.5,
cyto_nucl 2.5, mito_nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012615)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK053131
Gallus
sp. (Chicken) : CR390898
Macaca
sp. (Macaque) : ENSMMUT00000029768
Pongo
sp. (Orangutan) : ENSPPYT00000008053
Danio
sp. (Zebrafish) : XM_001338822
Monodelphis
sp. (Opossum) : XM_001372954
Equus
sp. (Horse) : XM_001917741
Pan
sp. (Chimpanzee) : XM_510617
Canis
sp. (Dog) : XM_545825
Bos
sp. (Cow) : XM_618325
HIX0012616
HIT000017910
(
AK093043
)
Representative transcript
(Conserved hypothetical protein.)
genome : 100,516,686 - 100,520,979 (4,294)
query : 1 - 2,395 (2,395/2,395)
2 exons
identity = 0.997
5'(1.000;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 6, cyto_nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012616)
HIX0012616
HIT000672665 (
ENST00000559400
)
(Conserved hypothetical protein.)
genome : 100,516,686 - 100,520,979 (4,294)
query : 1 - 2,393 (2,393/2,393)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 4.5, mito 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012616)
HIX0133196
HIT000448235
(
DQ581704
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,521,605 - 100,521,635 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0133196)
HIX0012615
HIT000681540 (
ENST00000568565
)
(A disintegrin and metalloproteinase with thrombospondin motifs 17; ADAM-TS 17; ADAM-TS17; ADAMTS-17; EC=3.4.24.-; Precursor;)
genome : 100,591,773 - 100,649,312 (57,540)
query : 1 - 643 (643/643)
5 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012615)
HIX0012610
HIT000116006 (
ENST00000301981
)
(Leucine-rich repeat-containing protein 28.)
genome : 99,791,567 - 99,930,934 (139,368)
query : 1 - 5,971 (5,971/5,971)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, extr 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012610)
HIX0012610
HIT000672664 (
ENST00000559399
)
(Leucine-rich repeat-containing protein 28.)
genome : 99,791,591 - 99,874,335 (82,745)
query : 1 - 892 (892/892)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12.5, extr 7, nucl 3.5,
extr_plas 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012610)
HIX0012610
HIT000053106
(
BC047306
)
Representative transcript
(Leucine-rich repeat-containing protein 28.)
genome : 99,791,652 - 99,926,497 (134,846)
query : 1 - 1,449 (1,449/1,464)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR003591 : Leucine-rich repeat, typical subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, extr 4, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012610)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ721015
Mus
sp. (Mouse) : AK077270
Bos
sp. (Cow) : BC109873
Tetraodon
sp. (Tetraodon) : CR711525
Pongo
sp. (Orangutan) : CR859947
Macaca
sp. (Macaque) : ENSMMUT00000007361
Oryzias
sp. (Medaka) : ENSORLT00000018488
Pan
sp. (Chimpanzee) : ENSPTRT00000013814
Takifugu
sp. (Fugu) : SINFRUT00000153393
Rattus
sp. (Rat) : XM_001057864
Monodelphis
sp. (Opossum) : XM_001365154
Equus
sp. (Horse) : XM_001488965
Canis
sp. (Dog) : XM_536176
Danio
sp. (Zebrafish) : XM_678142
HIX0012610
HIT000212836 (
NM_144598
)
(Leucine-rich repeat-containing protein 28.)
genome : 99,791,652 - 99,926,497 (134,846)
query : 1 - 1,449 (1,449/1,464)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, extr 4, nucl 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012610)
HIX0012610
HIT000016455
(
AK091588
)
(Leucine-rich repeat-containing protein 28.)
genome : 99,791,665 - 99,930,932 (139,268)
query : 2 - 2,683 (2,682/2,683)
10 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995;0.990)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 11, mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012610)
HIX0012610
HIT000490976
(
AK296352
)
(Leucine-rich repeat-containing protein 28.)
genome : 99,791,665 - 99,926,888 (135,224)
query : 1 - 1,727 (1,727/1,727)
10 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12.5, extr 8, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012610)
HIX0012610
HIT000672698 (
ENST00000559433
)
(Leucine-rich repeat-containing protein 28.)
genome : 99,791,665 - 99,903,383 (111,719)
query : 1 - 1,045 (1,045/1,045)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 11, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012610)
HIX0012610
HIT000671750 (
ENST00000558471
)
(Leucine-rich repeat-containing protein 28.)
genome : 99,791,668 - 99,901,716 (110,049)
query : 1 - 793 (793/793)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, extr 10, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012610)
HIX0012610
HIT000674479 (
ENST00000561253
)
(Leucine-rich repeat-containing protein 28.)
genome : 99,791,691 - 99,874,183 (82,493)
query : 1 - 574 (574/574)
6 exons
identity = 0.979
5'(1.000;1.000;0.939;0.809;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 8, cyto 7, cyto_nucl 6.5, E.R._mito 6.5,
mito_pero 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012610)
HIX0012610
HIT000489785
(
AK295161
)
(Leucine-rich repeat-containing protein 28.)
genome : 99,791,693 - 99,926,639 (134,947)
query : 2 - 1,344 (1,343/1,344)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001611 : Leucine-rich repeat
IPR003591 : Leucine-rich repeat, typical subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012610)
HIX0012610
HIT000520434 (
ENST00000422500
)
(Leucine-rich repeat-containing protein 28.)
genome : 99,791,693 - 99,926,639 (134,947)
query : 1 - 1,343 (1,343/1,343)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012610)
HIX0012610
HIT000252128
(
AY358082
)
(Leucine-rich repeat-containing protein 28.)
genome : 99,791,710 - 99,926,501 (134,792)
query : 1 - 1,235 (1,235/1,271)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR003591 : Leucine-rich repeat, typical subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, extr 4, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012610)
HIX0012610
HIT000545294 (
ENST00000447360
)
(Leucine-rich repeat-containing protein 28.)
genome : 99,791,710 - 99,926,501 (134,792)
query : 1 - 1,235 (1,235/1,235)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, extr 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012610)
HIX0012610
HIT000425684
(
AK292887
)
(Leucine-rich repeat-containing protein 28.)
genome : 99,791,710 - 99,926,447 (134,738)
query : 1 - 1,341 (1,341/1,341)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR003591 : Leucine-rich repeat, typical subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, extr 4, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012610)
HIX0012610
HIT000488456
(
AK293832
)
(Leucine-rich repeat-containing protein 28.)
genome : 99,791,710 - 99,903,438 (111,729)
query : 1 - 1,070 (1,070/1,070)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12.5, extr 8, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012610)
HIX0012610
HIT000540927 (
ENST00000442993
)
(Leucine-rich repeat-containing protein 28.)
genome : 99,791,710 - 99,903,438 (111,729)
query : 1 - 1,070 (1,070/1,070)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12.5, extr 8, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012610)
HIX0012610
HIT000671459 (
ENST00000558172
)
(Leucine-rich repeat-containing protein 28.)
genome : 99,791,720 - 99,901,714 (109,995)
query : 1 - 644 (644/644)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13, nucl 7.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012610)
HIX0012610
HIT000038684
(
BC019704
)
(Leucine-rich repeat-containing protein 28.)
genome : 99,791,746 - 99,926,501 (134,756)
query : 1 - 752 (752/771)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 5, cyto_nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012610)
HIX0012610
HIT000127238 (
ENST00000331450
)
(Leucine-rich repeat-containing protein 28.)
genome : 99,791,746 - 99,926,501 (134,756)
query : 1 - 752 (752/752)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012610)
HIX0012610
HIT000672135 (
ENST00000558861
)
(Leucine-rich repeat-containing protein 28.)
genome : 99,792,016 - 99,874,252 (82,237)
query : 1 - 744 (744/744)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 14.5, nucl 8.5, extr 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012610)
HIX0012610
HIT000674502 (
ENST00000561276
)
(Leucine-rich repeat-containing protein 28.)
genome : 99,796,101 - 99,903,471 (107,371)
query : 21 - 962 (942/967)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.974
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 6, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012610)
HIX0012610
HIT000672045 (
ENST00000558771
)
(Leucine-rich repeat-containing protein 28.)
genome : 99,826,907 - 99,892,662 (65,756)
query : 1 - 586 (586/586)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 6, cyto 5.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012610)
HIX0222862
HIT000055474
(
BX640928
)
Representative transcript
(Conserved hypothetical protein.)
genome : 100,255,907 - 100,273,596 (17,690)
query : 1 - 2,351 (2,351/2,368)
3 exons
identity = 0.998
3'(0.998;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 9.5, cyto_nucl 8.5, cyto 6.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222862)
HIX0222862
HIT000013332
(
AK056718
)
(Conserved hypothetical protein.)
genome : 100,255,906 - 100,273,649 (17,744)
query : 1 - 2,222 (2,222/2,222)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 9.5, cyto_nucl 8.5, cyto 6.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222862)
HIX0222862
HIT000599446 (
ENST00000496108
)
(Conserved hypothetical protein.)
genome : 100,255,906 - 100,273,649 (17,744)
query : 1 - 2,222 (2,222/2,222)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 9.5, cyto_nucl 8.5, cyto 6.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222862)
HIX0194274
pHIT000025739 ( pHIT000025739 )
Representative transcript
(Conserved hypothetical protein.)
genome : 99,825,568 - 99,825,831 (264)
query : 1 - 264 (264/264)
1 exon
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194274)
CAGE tag :
H04BA05E1802,H04BA07L0710,H05BC49D1901
H05BD17E0806,H05BD64K2008
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001144633
AC103968.11
99000001-99057575 F +
NCBI
AC118658.4
99057576-99209107 F +
NCBI
AC118660.5
99209108-99251659 F +
NCBI
AC055807.11
99251660-99408419 F +
NCBI
AC069029.9
99408420-99529036 F -
NCBI
AC036108.19
99529037-99696045 F -
NCBI
AC022819.8
99696046-99878168 F -
NCBI
AC037479.9
99878169-99935862 F +
NCBI
AC015660.8
99935863-100065346 F -
NCBI
AC103967.4
100065347-100137429 F -
NCBI
AC022692.11
100137430-100274284 F +
NCBI
AC090825.5
100274285-100435777 F +
NCBI
AC084855.4
100435778-100583632 F +
NCBI
AC022710.10
100583633-100600000 F +
NCBI