bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0223109
HIT000661561 (
ENST00000547427
)
(Conserved hypothetical protein.)
genome : 6,533,325 - 7,378,794 (845,470)
query : 1 - 557 (557/557)
5 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223109)
HIX0039007
HIT000196284
(
M73799
)
Representative transcript
(Hypothetical protein.)
genome : 7,272,053 - 7,273,303 (1,251)
query : 2 - 1,252 (1,251/1,253)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26.5, extr_plas 15.5, plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039007)
HIX0223006
HIT000074510
(
AF229057
)
(RNA binding protein fox-1 homolog 1 isoform 1.)
genome : 7,382,751 - 7,761,228 (378,478)
query : 4 - 1,998 (1,995/2,000)
13 exons
identity = 0.992
5'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.977)3'
coverage = 0.998
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR025670 : Fox-1 C-terminal domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223006)
HIX0223006
HIT000069593
(
AF109106
)
Representative transcript
(RNA binding protein fox-1 homolog 1 isoform 3.)
genome : 7,382,751 - 7,762,499 (379,749)
query : 2 - 3,320 (3,319/3,348)
14 exons
identity = 0.995
5'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.993)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR025670 : Fox-1 C-terminal domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223006)
HIX0223006
HIT000068418
(
AF094849
)
(RNA binding protein fox-1 homolog 1 isoform 2.)
genome : 7,382,751 - 7,760,847 (378,097)
query : 2 - 1,532 (1,531/1,547)
13 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR025670 : Fox-1 C-terminal domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223006)
HIX0223006
HIT000132839 (
ENST00000340209
)
(RNA recognition motif domain containing protein.)
genome : 7,382,751 - 7,763,340 (380,590)
query : 1 - 4,099 (4,099/4,099)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223006)
HIX0223006
HIT000213350 (
NM_145891
)
(RNA recognition motif domain containing protein.)
genome : 7,382,751 - 7,763,340 (380,590)
query : 1 - 4,102 (4,102/4,102)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223006)
HIX0223006
HIT000213351 (
NM_145892
)
(RNA recognition motif domain containing protein.)
genome : 7,382,751 - 7,763,340 (380,590)
query : 1 - 4,024 (4,024/4,024)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223006)
HIX0223006
HIT000213352 (
NM_145893
)
(RNA recognition motif domain containing protein.)
genome : 7,382,751 - 7,763,340 (380,590)
query : 1 - 4,155 (4,155/4,155)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223006)
HIX0223006
HIT000119161 (
ENST00000311745
)
(RNA recognition motif domain containing protein.)
genome : 7,382,751 - 7,762,506 (379,756)
query : 1 - 3,268 (3,268/3,268)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223006)
HIX0223006
HIT000309751 (
ENST00000355637
)
(RNA recognition motif domain containing protein.)
genome : 7,382,751 - 7,762,506 (379,756)
query : 1 - 3,321 (3,321/3,321)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223006)
HIX0223006
HIT000534302 (
ENST00000436368
)
(RNA recognition motif domain containing protein.)
genome : 7,382,751 - 7,760,846 (378,096)
query : 1 - 1,530 (1,530/1,530)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223006)
HIX0223006
HIT000387144
(
BC113691
)
(RNA binding protein fox-1 homolog 1 isoform 3.)
genome : 7,382,957 - 7,760,680 (377,724)
query : 1 - 1,289 (1,289/1,289)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR025670 : Fox-1 C-terminal domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223006)
HIX0223006
HIT000502258
(
BC143816
)
(RNA binding protein fox-1 homolog 1 isoform 2.)
genome : 7,382,957 - 7,760,680 (377,724)
query : 1 - 1,155 (1,155/1,155)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR025670 : Fox-1 C-terminal domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223006)
HIX0223006
HIT000682815 (
ENST00000569889
)
(Conserved hypothetical protein.)
genome : 7,472,779 - 7,568,391 (95,613)
query : 1 - 494 (494/503)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.982
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto_nucl 8.83333, cyto 8, nucl 6.5, extr 6,
cyto_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223006)
HIX0223006
HIT000683485 (
ENST00000570626
)
(RNA recognition motif domain containing protein.)
genome : 7,560,124 - 7,645,643 (85,520)
query : 1 - 725 (725/725)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223006)
HIX0223006
HIT000677953 (
ENST00000564850
)
(Conserved hypothetical protein.)
genome : 7,647,219 - 7,680,628 (33,410)
query : 1 - 293 (293/293)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 8.5, cyto_nucl 6, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223006)
HIX0223599
HIT000678334 (
ENST00000565247
)
(Hypothetical short protein.)
genome : 7,664,232 - 7,664,994 (763)
query : 1 - 567 (567/567)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 14, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223599)
HIX0223006
HIT000680479 (
ENST00000567470
)
(Fox-1 C-terminal domain containing protein.)
genome : 7,703,868 - 7,760,821 (56,954)
query : 1 - 420 (420/420)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223006)
HIX0223006
HIT000683097 (
ENST00000570188
)
(Conserved hypothetical protein.)
genome : 7,714,766 - 7,760,846 (46,081)
query : 1 - 568 (568/568)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223006)
HIX0212217
HIT000615732 (
ENST00000516329
)
(Hypothetical short protein.)
genome : 7,776,843 - 7,776,953 (111)
query : 1 - 111 (111/111)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212217)
HIX0223703
HIT000680123 (
ENST00000567103
)
(Hypothetical short protein.)
genome : 7,938,491 - 7,944,397 (5,907)
query : 1 - 445 (445/445)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223703)
HIX0223437
HIT000675563 (
ENST00000562361
)
(Hypothetical short protein.)
genome : 8,326,265 - 8,345,702 (19,438)
query : 1 - 600 (600/600)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22.5, mito_pero 12, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223437)
HIX0018936
HIT000024668
(
AL117506
)
Representative transcript
(Conserved hypothetical protein.)
genome : 8,348,494 - 8,349,773 (1,280)
query : 1 - 1,280 (1,280/1,289)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 11, nucl 9, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018936)
HIX0018936
HIT000679254 (
ENST00000566208
)
(Hypothetical short protein.)
genome : 8,348,494 - 8,349,774 (1,281)
query : 1 - 1,281 (1,281/1,281)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 11, nucl 9, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018936)
HIX0223544
HIT000677317 (
ENST00000564185
)
(Hypothetical short protein.)
genome : 8,359,964 - 8,407,862 (47,899)
query : 1 - 481 (481/481)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223544)
HIX0223655
HIT000679280 (
ENST00000566236
)
(Hypothetical short protein.)
genome : 8,419,866 - 8,426,278 (6,413)
query : 1 - 405 (405/405)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223655)
HIX0223743
HIT000680736 (
ENST00000567734
)
(Conserved hypothetical protein.)
genome : 8,558,071 - 8,558,587 (517)
query : 1 - 456 (456/456)
2 exons
identity = 0.978
5'(1.000;0.970)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 9.16667, nucl 8.5, cyto 6.5,
cyto_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223743)
HIX0223445
HIT000675712 (
ENST00000562516
)
(Hypothetical short protein.)
genome : 8,576,551 - 8,582,015 (5,465)
query : 1 - 214 (214/214)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, extr 4, cyto 3.5, cyto_nucl 3, golg 2,
extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223445)
HIX0096578
HIT000681319 (
ENST00000568335
)
(Transmembrane protein 114.)
genome : 8,619,502 - 8,622,226 (2,725)
query : 1 - 644 (644/644)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, extr 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096578)
HIX0096578
HIT000389541
(
BC127923
)
Representative transcript
(Transmembrane protein 235; Claudin-27; Precursor;)
genome : 8,619,708 - 8,622,304 (2,597)
query : 1 - 516 (516/516)
2 exons
identity = 0.998
3'(0.997;1.000)5'
coverage = 1.000
InterPro :
IPR004031 : PMP-22/EMP/MP20/Claudin superfamily
IPR006187 : Claudin
GO :
0005198 : Molecular Function : structural molecule activity
0005923 : Cellular Component : tight junction
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, extr 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096578)
HIX0096578
HIT000435833
(
BC150510
)
(Transmembrane protein 235; Claudin-27; Precursor;)
genome : 8,619,708 - 8,622,304 (2,597)
query : 1 - 516 (516/516)
2 exons
identity = 0.998
3'(0.997;1.000)5'
coverage = 1.000
InterPro :
IPR004031 : PMP-22/EMP/MP20/Claudin superfamily
IPR006187 : Claudin
GO :
0005198 : Molecular Function : structural molecule activity
0005923 : Cellular Component : tight junction
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, extr 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096578)
HIX0096578
HIT000435834
(
BC150511
)
(Transmembrane protein 235; Claudin-27; Precursor;)
genome : 8,619,708 - 8,622,304 (2,597)
query : 1 - 516 (516/516)
2 exons
identity = 0.998
3'(0.997;1.000)5'
coverage = 1.000
InterPro :
IPR004031 : PMP-22/EMP/MP20/Claudin superfamily
IPR006187 : Claudin
GO :
0005198 : Molecular Function : structural molecule activity
0005923 : Cellular Component : tight junction
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, extr 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096578)
HIX0096578
HIT000542105 (
ENST00000444171
)
(Transmembrane protein 235; Claudin-27; Precursor;)
genome : 8,619,708 - 8,622,304 (2,597)
query : 1 - 516 (516/516)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, extr 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096578)
HIX0222907
HIT000677096 (
ENST00000563958
)
(Conserved hypothetical protein.)
genome : 8,715,540 - 8,722,665 (7,126)
query : 1 - 614 (614/614)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 9, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222907)
HIX0222907
HIT000434249
(
AK315383
)
Representative transcript
(Conserved hypothetical protein.)
genome : 8,715,545 - 8,729,128 (13,584)
query : 1 - 876 (876/876)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 17, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222907)
HIX0222907
HIT000677670 (
ENST00000564554
)
(Hypothetical short protein.)
genome : 8,715,567 - 8,719,570 (4,004)
query : 1 - 550 (550/550)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, extr 12, nucl 10, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222907)
HIX0222907
HIT000680310 (
ENST00000567295
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 8,715,589 - 8,729,139 (13,551)
query : 1 - 714 (714/714)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 8, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222907)
HIX0222907
HIT000676206 (
ENST00000563037
)
(Hypothetical short protein.)
genome : 8,717,459 - 8,719,432 (1,974)
query : 1 - 597 (597/597)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, extr 11, nucl 10.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222907)
HIX0222907
HIT000002589
(
AK000114
)
(Conserved hypothetical protein.)
genome : 8,728,628 - 8,730,378 (1,751)
query : 1 - 1,751 (1,751/1,778)
1 exon
identity = 0.992
5'(0.992)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 9.83333, nucl 9, cyto 6.5,
cyto_pero 4.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222907)
HIX0222907
HIT000677738 (
ENST00000564624
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 8,729,025 - 8,733,062 (4,038)
query : 1 - 260 (260/260)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 5, nucl 4.5, cyto 4.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222907)
HIX0038790
HIT000089599
(
BC018364
)
Representative transcript
(Conserved hypothetical protein.)
genome : 8,730,844 - 8,731,841 (998)
query : 1 - 998 (998/1,012)
1 exon
identity = 0.991
5'(0.991)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038790)
HIX0222907
HIT000675205 (
ENST00000561993
)
(S-adenosyl-L-methionine-dependent methyltransferase domain containing protein.)
genome : 8,732,964 - 8,736,784 (3,821)
query : 1 - 656 (656/656)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222907)
HIX0222907
HIT000676653 (
ENST00000563501
)
(Hypothetical short protein.)
genome : 8,733,091 - 8,736,005 (2,915)
query : 1 - 519 (519/519)
3 exons
identity = 0.987
5'(0.993;0.926;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 11, nucl 10.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222907)
HIX0222907
HIT000678924 (
ENST00000565866
)
(Conserved hypothetical protein.)
genome : 8,734,988 - 8,740,075 (5,088)
query : 1 - 561 (561/561)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3.5, cyto_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222907)
HIX0222907
HIT000675359 (
ENST00000562151
)
(S-adenosyl-L-methionine-dependent methyltransferase domain containing protein.)
genome : 8,734,995 - 8,739,884 (4,890)
query : 1 - 520 (520/520)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222907)
HIX0222907
HIT000677240 (
ENST00000564107
)
(S-adenosyl-L-methionine-dependent methyltransferase domain containing protein.)
genome : 8,735,480 - 8,738,510 (3,031)
query : 1 - 438 (438/438)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222907)
HIX0222907
HIT000677266 (
ENST00000564133
)
(Conserved hypothetical protein.)
genome : 8,735,735 - 8,736,396 (662)
query : 1 - 407 (407/407)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto_nucl 4, nucl 3.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222907)
HIX0222907
HIT000676145 (
ENST00000562973
)
(Conserved hypothetical protein.)
genome : 8,736,325 - 8,738,901 (2,577)
query : 1 - 586 (586/586)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222907)
HIX0222907
HIT000682535 (
ENST00000569597
)
(Conserved hypothetical protein.)
genome : 8,738,294 - 8,740,079 (1,786)
query : 1 - 404 (404/404)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, cyto_mito 12, extr 8, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222907)
HIX0222907
HIT000017713
(
AK092846
)
(Conserved hypothetical protein.)
genome : 8,740,038 - 8,742,179 (2,142)
query : 1 - 2,144 (2,144/2,144)
1 exon
identity = 0.992
5'(0.992)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222907)
HIX0222907
HIT000054705
(
BX537921
)
(Conserved hypothetical protein.)
genome : 8,740,253 - 8,743,495 (3,243)
query : 1 - 3,247 (3,247/3,265)
1 exon
identity = 0.990
5'(0.990)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222907)
HIX0018352
HIT000022044
(
AK097189
)
Representative transcript
(Conserved hypothetical protein.)
genome : 8,744,025 - 8,746,315 (2,291)
query : 1 - 2,303 (2,303/2,304)
1 exon
identity = 0.983
3'(0.983)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 11, nucl 10.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018352)
HIX0012805
HIT000193068
(
L32961
)
(4-aminobutyrate aminotransferase, mitochondrial; EC=2.6.1.19; (S)-3-amino-2-methylpropionate transaminase; EC=2.6.1.22; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; GABA-T; L-AIBAT; Precursor;)
genome : 8,758,014 - 8,875,389 (117,376)
query : 1 - 1,704 (1,704/1,705)
16 exons
identity = 0.982
5'(0.983)3'
coverage = 0.999
EC number :
EC 2.6.1.19
,
EC 2.6.1.22
KEGG pathway :
00250 : Alanine, aspartate and glutamate metabolism (43)
00280 : Valine, leucine and isoleucine degradation (34)
00410 : beta-Alanine metabolism (34)
00640 : Propanoate metabolism (45)
00650 : Butanoate metabolism (47)
01100 : Metabolic pathways (1346)
InterPro :
IPR004631 : 4-aminobutyrate aminotransferase, eukaryotic
IPR005814 : Aminotransferase class-III
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0003867 : Molecular Function : 4-aminobutyrate transaminase activity
0008483 : Molecular Function : transaminase activity
0009448 : Biological Process : gamma-aminobutyric acid metabolic process
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 6.5, cyto_nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012805)
HIX0027086
HIT000050255
(
AK130984
)
Representative transcript
(Conserved hypothetical protein.)
genome : 8,760,619 - 8,761,128 (510)
query : 1 - 510 (510/510)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027086)
HIX0012805
HIT000110279 (
ENST00000268251
)
(Aminotransferase class-III family protein.)
genome : 8,768,422 - 8,878,432 (110,011)
query : 1 - 4,836 (4,836/4,836)
16 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 5.5, cyto_nucl 4.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012805)
HIX0012805
HIT000208033 (
NM_020686
)
(Aminotransferase class-III family protein.)
genome : 8,768,444 - 8,878,432 (109,989)
query : 1 - 4,814 (4,814/4,814)
16 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.6.1.19
,
EC 2.6.1.22
KEGG pathway :
00250 : Alanine, aspartate and glutamate metabolism (43)
00280 : Valine, leucine and isoleucine degradation (34)
00410 : beta-Alanine metabolism (34)
00640 : Propanoate metabolism (45)
00650 : Butanoate metabolism (47)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 5.5, cyto_nucl 4.5, nucl 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012805)
HIX0012805
HIT000054179
(
BX537362
)
(4-aminobutyrate aminotransferase, mitochondrial; EC=2.6.1.19; (S)-3-amino-2-methylpropionate transaminase; EC=2.6.1.22; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; GABA-T; L-AIBAT; Precursor;)
genome : 8,768,447 - 8,878,425 (109,979)
query : 1 - 4,804 (4,804/4,822)
16 exons
identity = 0.997
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.6.1.19
,
EC 2.6.1.22
KEGG pathway :
00250 : Alanine, aspartate and glutamate metabolism (43)
00280 : Valine, leucine and isoleucine degradation (34)
00410 : beta-Alanine metabolism (34)
00640 : Propanoate metabolism (45)
00650 : Butanoate metabolism (47)
01100 : Metabolic pathways (1346)
InterPro :
IPR004631 : 4-aminobutyrate aminotransferase, eukaryotic
IPR005814 : Aminotransferase class-III
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0003867 : Molecular Function : 4-aminobutyrate transaminase activity
0008483 : Molecular Function : transaminase activity
0009448 : Biological Process : gamma-aminobutyric acid metabolic process
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 5.5, cyto_nucl 4.5, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012805)
HIX0012805
HIT000677823 (
ENST00000564714
)
(4-aminobutyrate aminotransferase, eukaryotic family protein.)
genome : 8,768,453 - 8,844,313 (75,861)
query : 1 - 466 (466/466)
6 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012805)
HIX0012805
HIT000021001
(
AK096146
)
(4-aminobutyrate aminotransferase, mitochondrial; EC=2.6.1.19; (S)-3-amino-2-methylpropionate transaminase; EC=2.6.1.22; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; GABA-T; L-AIBAT; Precursor;)
genome : 8,768,474 - 8,831,330 (62,857)
query : 1 - 1,872 (1,872/1,872)
2 exons
identity = 0.992
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.6.1.19
,
EC 2.6.1.22
KEGG pathway :
00250 : Alanine, aspartate and glutamate metabolism (43)
00280 : Valine, leucine and isoleucine degradation (34)
00410 : beta-Alanine metabolism (34)
00640 : Propanoate metabolism (45)
00650 : Butanoate metabolism (47)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 5, cyto_nucl 4.33333, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012805)
HIX0012805
HIT000677129 (
ENST00000563992
)
(Conserved hypothetical protein.)
genome : 8,768,474 - 8,831,330 (62,857)
query : 1 - 1,870 (1,870/1,870)
2 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 5, cyto_nucl 4.33333, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012805)
HIX0012805
HIT000041297
(
BC031413
)
(4-aminobutyrate aminotransferase, mitochondrial; EC=2.6.1.19; (S)-3-amino-2-methylpropionate transaminase; EC=2.6.1.22; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; GABA-T; L-AIBAT; Precursor;)
genome : 8,768,492 - 8,875,387 (106,896)
query : 1 - 1,721 (1,721/1,757)
16 exons
identity = 0.998
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.6.1.19
,
EC 2.6.1.22
KEGG pathway :
00250 : Alanine, aspartate and glutamate metabolism (43)
00280 : Valine, leucine and isoleucine degradation (34)
00410 : beta-Alanine metabolism (34)
00640 : Propanoate metabolism (45)
00650 : Butanoate metabolism (47)
01100 : Metabolic pathways (1346)
InterPro :
IPR004631 : 4-aminobutyrate aminotransferase, eukaryotic
IPR005814 : Aminotransferase class-III
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0003867 : Molecular Function : 4-aminobutyrate transaminase activity
0008483 : Molecular Function : transaminase activity
0009448 : Biological Process : gamma-aminobutyric acid metabolic process
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 5.5, cyto_nucl 4.5, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012805)
HIX0012805
HIT000037226
(
BC015628
)
Representative transcript
(4-aminobutyrate aminotransferase, mitochondrial; EC=2.6.1.19; (S)-3-amino-2-methylpropionate transaminase; EC=2.6.1.22; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; GABA-T; L-AIBAT; Precursor;)
genome : 8,768,523 - 8,875,377 (106,855)
query : 1 - 1,680 (1,680/1,697)
16 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.6.1.19
,
EC 2.6.1.22
KEGG pathway :
00250 : Alanine, aspartate and glutamate metabolism (43)
00280 : Valine, leucine and isoleucine degradation (34)
00410 : beta-Alanine metabolism (34)
00640 : Propanoate metabolism (45)
00650 : Butanoate metabolism (47)
01100 : Metabolic pathways (1346)
InterPro :
IPR004631 : 4-aminobutyrate aminotransferase, eukaryotic
IPR005814 : Aminotransferase class-III
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0003867 : Molecular Function : 4-aminobutyrate transaminase activity
0008483 : Molecular Function : transaminase activity
0009448 : Biological Process : gamma-aminobutyric acid metabolic process
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 5.5, cyto_nucl 4.5, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012805)
HIX0018900
HIT000328761
(
AB208826
)
(RNA binding protein fox-1 homolog 1; Ataxin-2-binding protein 1; Fox-1 homolog A; Hexaribonucleotide-binding protein 1;)
genome : 6,069,095 - 7,703,848 (1,634,754)
query : 1 - 1,811 (1,811/1,811)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018900)
HIX0018900
HIT000661726 (
ENST00000547605
)
(RNA binding protein fox-1 homolog 1; Ataxin-2-binding protein 1; Fox-1 homolog A; Hexaribonucleotide-binding protein 1;)
genome : 6,069,095 - 7,703,848 (1,634,754)
query : 1 - 1,811 (1,811/1,811)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018900)
HIX0018900
HIT000207411 (
NM_018723
)
(RNA binding protein fox-1 homolog 1; Ataxin-2-binding protein 1; Fox-1 homolog A; Hexaribonucleotide-binding protein 1;)
genome : 6,069,132 - 7,763,340 (1,694,209)
query : 1 - 4,775 (4,775/4,775)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018900)
HIX0018900
HIT000560531 (
NM_001142333
)
(RNA binding protein fox-1 homolog 1 isoform 5.)
genome : 6,069,132 - 7,763,340 (1,694,209)
query : 1 - 4,694 (4,694/4,694)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018900)
HIX0018900
HIT000069521
(
AF107203
)
Representative transcript
(RNA binding protein fox-1 homolog 1; Ataxin-2-binding protein 1; Fox-1 homolog A; Hexaribonucleotide-binding protein 1;)
genome : 6,069,132 - 7,760,842 (1,691,711)
query : 1 - 2,275 (2,275/2,279)
16 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR025670 : Fox-1 C-terminal domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018900)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB060859
Mus
sp. (Mouse) : BC059002
Danio
sp. (Zebrafish) : BC081500
Bos
sp. (Cow) : BC118423
Gallus
sp. (Chicken) : BX936053
Pongo
sp. (Orangutan) : CR859547
Oryzias
sp. (Medaka) : ENSORLT00000001107
Tetraodon
sp. (Tetraodon) : GSTENT00003547001
Takifugu
sp. (Fugu) : SINFRUT00000161426
Rattus
sp. (Rat) : XM_001076609
Monodelphis
sp. (Opossum) : XM_001367166
Equus
sp. (Horse) : XM_001502578
Canis
sp. (Dog) : XM_858682
HIX0018900
HIT000079808
(
AF448859
)
(RNA binding protein fox-1 homolog 1 isoform 5.)
genome : 6,069,132 - 7,760,842 (1,691,711)
query : 1 - 2,194 (2,194/2,198)
15 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR025670 : Fox-1 C-terminal domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018900)
HIX0018900
HIT000664166 (
ENST00000550418
)
(RNA binding protein fox-1 homolog 1; Ataxin-2-binding protein 1; Fox-1 homolog A; Hexaribonucleotide-binding protein 1;)
genome : 6,069,132 - 7,760,842 (1,691,711)
query : 1 - 2,277 (2,277/2,277)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018900)
HIX0018900
HIT000666584 (
ENST00000553186
)
(RNA binding protein fox-1 homolog 1 isoform 5.)
genome : 6,069,132 - 7,760,842 (1,691,711)
query : 1 - 2,196 (2,196/2,196)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018900)
HIX0018900
HIT000026625
(
AL713700
)
(RNA binding protein fox-1 homolog 1; Ataxin-2-binding protein 1; Fox-1 homolog A; Hexaribonucleotide-binding protein 1;)
genome : 6,069,222 - 7,703,847 (1,634,626)
query : 1 - 1,623 (1,623/1,623)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018900)
HIX0018900
HIT000661515 (
ENST00000547372
)
(RNA binding protein fox-1 homolog 1; Ataxin-2-binding protein 1; Fox-1 homolog A; Hexaribonucleotide-binding protein 1;)
genome : 6,069,594 - 7,761,460 (1,691,867)
query : 1 - 3,524 (3,524/3,524)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018900)
HIX0018900
HIT000488575
(
AK293951
)
(RNA binding protein fox-1 homolog 1; Ataxin-2-binding protein 1; Fox-1 homolog A; Hexaribonucleotide-binding protein 1;)
genome : 6,069,704 - 7,759,783 (1,690,080)
query : 1 - 1,686 (1,686/1,686)
16 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.981;1.000;
1.000;1.000;1.000;1.000;0.993)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR025670 : Fox-1 C-terminal domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018900)
HIX0018900
HIT000520004 (
ENST00000422070
)
(RNA binding protein fox-1 homolog 1; Ataxin-2-binding protein 1; Fox-1 homolog A; Hexaribonucleotide-binding protein 1;)
genome : 6,069,704 - 7,759,783 (1,690,080)
query : 1 - 1,684 (1,684/1,684)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018900)
HIX0018900
HIT000091262
(
BC026312
)
(RNA binding protein fox-1 homolog 1; Ataxin-2-binding protein 1; Fox-1 homolog A; Hexaribonucleotide-binding protein 1;)
genome : 6,069,883 - 7,763,340 (1,693,458)
query : 1 - 4,022 (4,022/4,039)
16 exons
identity = 0.997
5'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.987;0.997)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR025670 : Fox-1 C-terminal domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018900)
HIX0018900
HIT000634610 (
ENST00000535565
)
(RNA binding protein fox-1 homolog 1; Ataxin-2-binding protein 1; Fox-1 homolog A; Hexaribonucleotide-binding protein 1;)
genome : 6,533,180 - 7,759,778 (1,226,599)
query : 1 - 1,599 (1,599/1,599)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9, cyto_nucl 9, cyto 8.5, extr 8, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018900)
HIX0018900
HIT000665621 (
ENST00000552089
)
(RNA binding protein fox-1 homolog 1; Ataxin-2-binding protein 1; Fox-1 homolog A; Hexaribonucleotide-binding protein 1;)
genome : 6,533,387 - 7,760,765 (1,227,379)
query : 1 - 1,430 (1,430/1,430)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14, mito 9, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018900)
HIX0018900
HIT000494288
(
AK299664
)
(RNA binding protein fox-1 homolog 1; Ataxin-2-binding protein 1; Fox-1 homolog A; Hexaribonucleotide-binding protein 1;)
genome : 6,533,474 - 7,759,778 (1,226,305)
query : 1 - 1,305 (1,305/1,305)
14 exons
identity = 0.999
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR025670 : Fox-1 C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 9, cyto_nucl 7, nucl 6, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018900)
HIX0018900
HIT000093261
(
BC033885
)
(RNA binding protein fox-1 homolog 1; Ataxin-2-binding protein 1; Fox-1 homolog A; Hexaribonucleotide-binding protein 1;)
genome : 6,533,794 - 7,703,848 (1,170,055)
query : 1 - 973 (973/973)
11 exons
identity = 0.998
5'(1.000;1.000;0.981;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018900)
HIX0018900
HIT000665323 (
ENST00000551752
)
(RNA binding protein fox-1 homolog 1; Ataxin-2-binding protein 1; Fox-1 homolog A; Hexaribonucleotide-binding protein 1;)
genome : 6,533,794 - 7,703,848 (1,170,055)
query : 1 - 974 (974/974)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018900)
HIX0018900
HIT000560532 (
NM_001142334
)
(RNA binding protein fox-1 homolog 1; Ataxin-2-binding protein 1; Fox-1 homolog A; Hexaribonucleotide-binding protein 1;)
genome : 6,823,810 - 7,763,340 (939,531)
query : 1 - 4,007 (4,007/4,007)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018900)
HIX0018900
HIT000003501
(
AK001027
)
(RNA binding protein fox-1 homolog 1; Ataxin-2-binding protein 1; Fox-1 homolog A; Hexaribonucleotide-binding protein 1;)
genome : 6,823,810 - 7,760,846 (937,037)
query : 1 - 1,513 (1,513/1,513)
14 exons
identity = 0.999
5'(1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018900)
HIX0018900
HIT000661484 (
ENST00000547338
)
(RNA binding protein fox-1 homolog 1; Ataxin-2-binding protein 1; Fox-1 homolog A; Hexaribonucleotide-binding protein 1;)
genome : 6,823,810 - 7,760,846 (937,037)
query : 1 - 1,513 (1,513/1,513)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018900)
HIX0012804
HIT000209135 (
NM_024109
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 8,715,527 - 8,740,079 (24,553)
query : 1 - 1,570 (1,570/1,570)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 15.5, nucl 14.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012804)
HIX0012804
HIT000363198 (
ENST00000381920
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 8,715,545 - 8,740,079 (24,535)
query : 1 - 1,552 (1,552/1,552)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 15.5, nucl 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012804)
HIX0012804
HIT000030738
(
BC001908
)
Representative transcript
(Methyltransferase-like protein 22.)
genome : 8,715,548 - 8,740,078 (24,531)
query : 1 - 1,507 (1,507/1,525)
10 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.988;
1.000;0.982;0.991)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 17, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012804)
HIX0012804
HIT000102476 (
ENST00000163678
)
(Conserved hypothetical protein.)
genome : 8,715,548 - 8,740,081 (24,534)
query : 1 - 1,510 (1,510/1,510)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 17, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012804)
HIX0012804
HIT000005769
(
AK022495
)
(Methyltransferase-like protein 22.)
genome : 8,715,564 - 8,740,072 (24,509)
query : 1 - 1,485 (1,485/1,485)
10 exons
identity = 0.995
5'(1.000;1.000;1.000;0.993;1.000;0.981;0.988;
1.000;0.982;0.981)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 17, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012804)
HIX0012804
HIT000674974 (
ENST00000561758
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 8,715,586 - 8,740,048 (24,463)
query : 1 - 1,312 (1,312/1,312)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 16, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012804)
HIX0012804
HIT000251015
(
AY203956
)
(S-adenosyl-L-methionine-dependent methyltransferase domain containing protein.)
genome : 8,722,641 - 8,740,078 (17,438)
query : 1 - 1,065 (1,065/1,083)
8 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;0.988;1.000;0.982;
0.991)3'
coverage = 1.000
InterPro :
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 11.5, cyto_nucl 8.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012804)
HIX0012804
HIT000337329
(
BC103725
)
(Methyltransferase-like protein 22.)
genome : 8,725,104 - 8,740,078 (14,975)
query : 13 - 1,683 (1,671/1,697)
9 exons
identity = 0.993
5'(0.992;1.000;1.000;1.000;1.000;0.988;1.000;
0.982;0.991)3'
coverage = 0.993
InterPro :
IPR019410 : Nicotinamide N-methyltransferase-like
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 7.5, cyto_nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012804)
HIX0012804
HIT000681923 (
ENST00000568967
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 8,725,104 - 8,740,079 (14,976)
query : 1 - 1,672 (1,672/1,672)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 8.5, cyto 7.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012804)
HIX0012804
HIT000685494 (
ENST00000572956
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 8,729,082 - 8,740,075 (10,994)
query : 1 - 706 (706/706)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, extr 11, cyto_nucl 8.83333,
cyto_pero 6.83333, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012804)
AC022206.3
7200001-7223393 F -
NCBI
AC079410.3
7223394-7335604 F -
NCBI
AC007222.5
7335605-7482413 F +
NCBI
AC006075.1
7482414-7548642 F +
NCBI
AC027683.6
7548643-7661131 F +
NCBI
AC005774.1
7661132-7776973 F -
NCBI
AC093522.4
7776974-7929021 F +
NCBI
AC133001.1
7929022-7930024 F +
NCBI
AC093515.4
7930025-8113850 F +
NCBI
AC018768.7
8113851-8297594 F +
NCBI
AC018767.3
8297595-8423654 F -
NCBI
AC018769.2
8423655-8434049 F +
NCBI
AC074052.6
8434050-8622109 F +
NCBI
AC137777.3
8622110-8629327 F -
NCBI
AC140531.3
8629328-8636921 F -
NCBI
50000
8636922-8686921 N
AC138420.2
8686922-8723564 F -
NCBI
AC007224.5
8723565-8800000 F +
NCBI