bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0173367
HIT000456464_05
(
DQ589933
)
Representative transcript
(Non-protein coding transcript.)
genome : 15,001,471 - 15,001,500 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173367)
HIX0223286
HIT000694857_01 (
ENST00000582974
)
(Non-protein coding transcript.)
genome : 15,001,574 - 15,001,638 (65)
query : 1 - 65 (65/65)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223286)
HIX0223286
HIT000696034_01 (
ENST00000584160
)
(Non-protein coding transcript.)
genome : 15,001,574 - 15,001,638 (65)
query : 1 - 65 (65/65)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223286)
HIX0223286
HIT000696719_01 (
ENST00000584855
)
(Non-protein coding transcript.)
genome : 15,001,574 - 15,001,638 (65)
query : 1 - 65 (65/65)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223286)
HIX0223286
HIT000725533_01 (
NR_037442
)
(Non-protein coding transcript.)
genome : 15,001,574 - 15,001,638 (65)
query : 1 - 65 (65/65)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223286)
HIX0223286
HIT000727236_01 (
NR_049832
)
(Non-protein coding transcript.)
genome : 15,001,574 - 15,001,638 (65)
query : 1 - 65 (65/65)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223286)
HIX0212008
HIT000662294 (
ENST00000548268
)
(Conserved hypothetical protein.)
genome : 15,003,744 - 15,005,202 (1,459)
query : 1 - 1,459 (1,459/1,459)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, extr 9.5, extr_plas 6.5, nucl 4, pero 4,
plas 2.5, mito_pero 2.5, mito_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212008)
HIX0212008
HIT000659404_01 (
NR_036141
)
(Non-protein coding transcript.)
genome : 15,005,077 - 15,005,170 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212008)
HIX0212008
HIT000659407_01 (
NR_036144
)
(Non-protein coding transcript.)
genome : 15,005,077 - 15,005,170 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212008)
HIX0212008
HIT000692289_01 (
ENST00000580374
)
(Non-protein coding transcript.)
genome : 15,005,077 - 15,005,170 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212008)
HIX0212008
HIT000693649_01 (
ENST00000581748
)
(Non-protein coding transcript.)
genome : 15,005,077 - 15,005,170 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212008)
HIX0212008
HIT000696483_01 (
ENST00000584616
)
(Non-protein coding transcript.)
genome : 15,005,077 - 15,005,170 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212008)
HIX0212008
HIT000659405_01 (
NR_036142
)
(Non-protein coding transcript.)
genome : 15,005,081 - 15,005,168 (88)
query : 1 - 88 (88/88)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212008)
HIX0223079
HIT000633226 (
ENST00000534164
)
(PKD domain containing protein.)
genome : 15,005,408 - 15,029,565 (24,158)
query : 1 - 6,830 (6,830/6,830)
31 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, cyto 8, extr 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223079)
HIX0223079
HIT000643623_01 (
ENST00000544578
)
(Cysteine-rich flanking region, C-terminal domain containing protein.)
genome : 15,005,423 - 15,012,382 (6,960)
query : 1 - 727 (727/727)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, cyto_mito 11.6667, cyto_nucl 7.5, cyto 6,
nucl 5.5, cyto_pero 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223079)
HIX0173385
HIT000465003_07
(
DQ598472
)
Representative transcript
(Non-protein coding transcript.)
genome : 15,006,545 - 15,006,574 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173385)
HIX0223079
HIT000644673 (
ENST00000545628
)
(C-type lectin-like domain containing protein.)
genome : 15,012,815 - 15,020,009 (7,195)
query : 1 - 2,519 (2,519/2,519)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223079)
HIX0223079
HIT000636934 (
ENST00000537889
)
(Conserved hypothetical protein.)
genome : 15,014,193 - 15,015,944 (1,752)
query : 1 - 514 (514/514)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 5, cyto_nucl 5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223079)
HIX0223079
HIT000453569_04
(
DQ587038
)
(Non-protein coding transcript.)
genome : 15,018,460 - 15,018,490 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223079)
HIX0173395
HIT000490223
(
AK295599
)
Representative transcript
(Polycystin-1; Autosomal dominant polycystic kidney disease 1 protein; Precursor;)
genome : 15,019,607 - 15,021,140 (1,534)
query : 1 - 1,076 (1,076/1,076)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 9, cyto 4, cyto_pero 3.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173395)
HIX0223079
HIT000489449
(
AK294825
)
Representative transcript
(PKD/REJ-like protein domain containing protein.)
genome : 15,020,233 - 15,023,486 (3,254)
query : 11 - 964 (954/964)
6 exons
identity = 0.998
5'(1.000;0.994;1.000;1.000;1.000;0.991)3'
coverage = 0.990
InterPro :
IPR002859 : PKD/REJ-like protein
IPR014010 : Egg jelly receptor, REJ-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 9.5, nucl 8, cyto 7, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223079)
HIX0223079
HIT000637265_01 (
ENST00000538220
)
(PKD/REJ-like protein domain containing protein.)
genome : 15,020,235 - 15,022,269 (2,035)
query : 1 - 558 (558/558)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223079)
HIX0223079
HIT000644197_01 (
ENST00000545152
)
(Egg jelly receptor, REJ-like domain containing protein.)
genome : 15,020,776 - 15,022,382 (1,607)
query : 1 - 586 (586/586)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 9, extr_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223079)
HIX0038546
HIT000644876 (
ENST00000545831
)
(Conserved hypothetical protein.)
genome : 15,031,271 - 15,039,780 (8,510)
query : 1 - 553 (553/553)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12, mito 7, nucl 3.5,
E.R._mito 3.5, mito_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038546)
HIX0038546
HIT000203529 (
NM_006985
)
(Nuclear pore complex interacting protein family protein.)
genome : 15,031,300 - 15,045,931 (14,632)
query : 1 - 1,102 (1,102/1,102)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, mito 5, nucl 2.5,
E.R._mito 2.5, mito_pero 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038546)
HIX0038546
HIT000125356 (
ENST00000328085
)
(Nuclear pore complex interacting protein family protein.)
genome : 15,031,300 - 15,045,913 (14,614)
query : 1 - 1,084 (1,084/1,084)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, mito 5, nucl 2.5,
E.R._mito 2.5, mito_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038546)
HIX0038546
HIT000070961
(
AF132984
)
Representative transcript
(Nuclear pore complex-interacting protein; NPIP;)
genome : 15,031,300 - 15,045,899 (14,600)
query : 1 - 1,070 (1,070/1,070)
8 exons
identity = 0.998
5'(1.000;0.992;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 1.000
InterPro :
IPR009443 : Nuclear pore complex interacting protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 13.5, mito 5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038546)
HIX0038546
HIT000522483 (
ENST00000424549
)
(Nuclear pore complex interacting protein family protein.)
genome : 15,032,072 - 15,043,937 (11,866)
query : 1 - 657 (657/657)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, plas 9, E.R. 4, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038546)
HIX0038546
HIT000644524 (
ENST00000545479
)
(Conserved hypothetical protein.)
genome : 15,035,376 - 15,039,730 (4,355)
query : 1 - 559 (559/559)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, mito 3, nucl 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038546)
HIX0038546
HIT000633766 (
ENST00000534720
)
(Nuclear pore complex interacting protein family protein.)
genome : 15,035,677 - 15,044,557 (8,881)
query : 1 - 1,915 (1,915/1,915)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, cyto 9, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038546)
HIX0038546
HIT000636107 (
ENST00000537062
)
(Conserved hypothetical protein.)
genome : 15,039,742 - 15,044,378 (4,637)
query : 1 - 568 (568/568)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038546)
HIX0038546
HIT000626898_01 (
ENST00000527703
)
(Nuclear pore complex interacting protein family protein.)
genome : 15,039,756 - 15,045,583 (5,828)
query : 1 - 470 (470/470)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 8, cyto 8, mito_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038546)
HIX0211991
HIT000459721_04
(
DQ593190
)
Representative transcript
(Non-protein coding transcript.)
genome : 15,042,263 - 15,042,292 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211991)
HIX0038546
HIT000488801
(
AK294177
)
(Conserved hypothetical protein.)
genome : 15,043,885 - 15,044,939 (1,055)
query : 1 - 946 (946/946)
2 exons
identity = 0.987
5'(0.880;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 4, nucl 3, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038546)
HIX0223247
HIT000702066_05 (
ENST00000590231
)
(Phospholipase A2 domain containing protein.)
genome : 15,046,870 - 15,046,977 (108)
query : 1 - 108 (108/108)
1 exon
identity = 0.972
3'(0.972)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 7, cyto_nucl 6.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223247)
HIX0223247
HIT000682209_05 (
ENST00000569264
)
(Phospholipase A2 family protein.)
genome : 15,046,872 - 15,046,977 (106)
query : 1 - 106 (106/106)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto_nucl 4, nucl 3.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223247)
HIX0223049
HIT000676811 (
ENST00000563667
)
(Conserved hypothetical protein.)
genome : 15,068,594 - 15,100,281 (31,688)
query : 1 - 554 (554/554)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13.5, nucl 3.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223049)
HIX0223049
HIT000676672 (
ENST00000563522
)
(Conserved hypothetical protein.)
genome : 15,068,660 - 15,098,193 (29,534)
query : 1 - 542 (542/556)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.993)3'
coverage = 0.975
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14.5, nucl 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223049)
HIX0223049
HIT000679463 (
ENST00000566426
)
(Non-protein coding transcript.)
genome : 15,068,888 - 15,092,219 (23,332)
query : 1 - 283 (283/283)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223049)
HIX0223049
HIT000678446 (
ENST00000565362
)
(Conserved hypothetical protein.)
genome : 15,069,009 - 15,102,697 (33,689)
query : 1 - 720 (720/720)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 17, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223049)
HIX0223049
HIT000680321 (
ENST00000567306
)
(Pyridoxal phosphate-dependent decarboxylase family protein.)
genome : 15,070,620 - 15,111,244 (40,625)
query : 1 - 980 (980/980)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223049)
HIX0038636
HIT000503435
(
BC157880
)
Representative transcript
(Protein of unknown function DUF2152 family protein.)
genome : 15,081,984 - 15,084,228 (2,245)
query : 1 - 2,212 (2,212/2,212)
2 exons
identity = 0.997
3'(0.997;1.000)5'
coverage = 1.000
InterPro :
IPR018795 : Protein of unknown function DUF2152
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, E.R. 6.5, E.R._golg 4.5, extr 4, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038636)
HIX0038636
HIT000680638_02 (
ENST00000567634
)
(Protein of unknown function DUF2152 family protein.)
genome : 15,082,116 - 15,084,017 (1,902)
query : 1 - 1,902 (1,902/1,902)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11, extr 9, E.R. 5, lyso 3, E.R._mito 3,
E.R._golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038636)
HIX0223049
HIT000341882
(
DQ111782
)
Representative transcript
(Pyridoxal phosphate-dependent decarboxylase family protein.)
genome : 15,091,608 - 15,116,585 (24,978)
query : 20 - 1,113 (1,094/1,113)
12 exons
identity = 0.994
5'(1.000;0.970;1.000;0.986;0.995;1.000;1.000;
1.000;0.980;1.000;1.000;0.960)3'
coverage = 0.983
InterPro :
IPR002129 : Pyridoxal phosphate-dependent decarboxylase
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0016831 : Molecular Function : carboxy-lyase activity
0019752 : Biological Process : carboxylic acid metabolic process
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13, nucl 7.5, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223049)
HIX0223049
HIT000675143 (
ENST00000561930
)
(Pyridoxal phosphate-dependent decarboxylase family protein.)
genome : 15,103,168 - 15,111,010 (7,843)
query : 1 - 568 (568/568)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223049)
HIX0173239
HIT000556747_01 (
ENST00000458813
)
(Non-protein coding transcript.)
genome : 15,104,178 - 15,104,254 (77)
query : 1 - 77 (77/77)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173239)
HIX0173239
HIT000557271_01 (
ENST00000459337
)
(Non-protein coding transcript.)
genome : 15,104,178 - 15,104,254 (77)
query : 1 - 77 (77/77)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173239)
HIX0173239
HIT000659320_01 (
NR_036054
)
(Non-protein coding transcript.)
genome : 15,104,178 - 15,104,254 (77)
query : 1 - 77 (77/77)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173239)
HIX0173239
HIT000659528_01 (
NR_036265
)
(Non-protein coding transcript.)
genome : 15,104,178 - 15,104,254 (77)
query : 1 - 77 (77/77)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173239)
HIX0173252
HIT000018824
(
AK093967
)
Representative transcript
(Pyridoxal-dependent decarboxylase domain-containing protein 1.)
genome : 15,109,428 - 15,114,345 (4,918)
query : 1 - 2,396 (2,396/2,410)
2 exons
identity = 0.995
3'(0.930;0.998)5'
coverage = 0.994
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173252)
HIX0173252
HIT000678268 (
ENST00000565178
)
(Pyridoxal-dependent decarboxylase domain-containing protein 1.)
genome : 15,111,963 - 15,114,345 (2,383)
query : 1 - 2,383 (2,383/2,383)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 3, mito 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173252)
HIX0222922
HIT000015419
(
AK090552
)
(Pyridoxal-dependent decarboxylase domain-containing protein 1.)
genome : 15,119,081 - 15,126,510 (7,430)
query : 1 - 2,595 (2,595/2,595)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222922)
HIX0222922
HIT000679665 (
ENST00000566633
)
(Conserved hypothetical protein.)
genome : 15,119,081 - 15,126,510 (7,430)
query : 1 - 2,597 (2,597/2,597)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222922)
HIX0222922
HIT000008778
(
AK025504
)
Representative transcript
(Pyridoxal-dependent decarboxylase domain-containing protein 1.)
genome : 15,120,499 - 15,131,544 (11,046)
query : 11 - 2,652 (2,642/2,666)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16.5, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222922)
HIX0173352
HIT000448639_04
(
DQ582108
)
Representative transcript
(Non-protein coding transcript.)
genome : 15,124,154 - 15,124,184 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173352)
HIX0222922
HIT000097129
(
BC042104
)
(Conserved hypothetical protein.)
genome : 15,126,811 - 15,131,544 (4,734)
query : 1 - 2,115 (2,115/2,156)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14, nucl 7.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222922)
HIX0222922
HIT000679040 (
ENST00000565986
)
(Conserved hypothetical protein.)
genome : 15,127,949 - 15,129,944 (1,996)
query : 1 - 561 (561/561)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12.5, nucl 10.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222922)
HIX0017570
HIT000214862 (
NM_173474
)
(Protein N-terminal asparagine amidohydrolase isoform 1.)
genome : 15,131,710 - 15,149,936 (18,227)
query : 1 - 1,219 (1,219/1,241)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 17, nucl 9.5, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017570)
HIX0017570
HIT000724815 (
NM_001270766
)
(Protein N-terminal asparagine amidohydrolase isoform 2.)
genome : 15,131,710 - 15,149,936 (18,227)
query : 1 - 1,116 (1,116/1,138)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, nucl 11, cyto 10, cysk 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017570)
HIX0017570
HIT000724816 (
NM_001270767
)
(Protein N-terminal asparagine amidohydrolase isoform 2.)
genome : 15,131,710 - 15,149,936 (18,227)
query : 1 - 1,050 (1,050/1,072)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, nucl 11, cyto 10, cysk 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017570)
HIX0017570
HIT000242660
(
AF092440
)
Representative transcript
(Protein N-terminal asparagine amidohydrolase isoform 2.)
genome : 15,131,710 - 15,149,843 (18,134)
query : 1 - 1,126 (1,126/1,148)
10 exons
identity = 0.991
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.907)5'
coverage = 1.000
InterPro :
IPR026750 : Protein N-terminal asparagine amidohydrolase
GO :
0008418 : Molecular Function : protein-N-terminal asparagine amidohydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 17.5, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017570)
HIX0017570
HIT000037951
(
BC017336
)
(Protein N-terminal asparagine amidohydrolase isoform 1.)
genome : 15,131,716 - 15,149,833 (18,118)
query : 1 - 1,110 (1,110/1,137)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026750 : Protein N-terminal asparagine amidohydrolase
GO :
0008418 : Molecular Function : protein-N-terminal asparagine amidohydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 17, nucl 9.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017570)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB056757
Mus
sp. (Mouse) : BC030172
Rattus
sp. (Rat) : BC091175
Bos
sp. (Cow) : ENSBTAT00000006307
Pongo
sp. (Orangutan) : ENSPPYT00000008393
Tetraodon
sp. (Tetraodon) : GSTENT00011848001
Takifugu
sp. (Fugu) : SINFRUT00000146245
Gallus
sp. (Chicken) : XM_001231312
Monodelphis
sp. (Opossum) : XM_001366125
Equus
sp. (Horse) : XM_001488886
Pan
sp. (Chimpanzee) : XM_510838
Canis
sp. (Dog) : XM_846745
HIX0017570
HIT000027935
(
AL833023
)
(Protein N-terminal asparagine amidohydrolase isoform 2.)
genome : 15,131,710 - 15,133,814 (2,105)
query : 1 - 1,742 (1,742/1,761)
2 exons
identity = 0.999
3'(1.000;0.999)5'
coverage = 1.000
InterPro :
IPR026750 : Protein N-terminal asparagine amidohydrolase
GO :
0008418 : Molecular Function : protein-N-terminal asparagine amidohydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 12.5, extr 6, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017570)
HIX0017570
HIT000112887 (
ENST00000287706
)
(Protein N-terminal asparagine amidohydrolase isoform 1.)
genome : 15,131,710 - 15,149,921 (18,212)
query : 1 - 1,204 (1,204/1,204)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 17, nucl 9.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017570)
HIX0017570
HIT000017782
(
AK092915
)
(Protein N-terminal asparagine amidohydrolase isoform 2.)
genome : 15,131,711 - 15,139,911 (8,201)
query : 1 - 2,401 (2,401/2,401)
6 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.981;0.997)5'
coverage = 1.000
InterPro :
IPR026750 : Protein N-terminal asparagine amidohydrolase
GO :
0008418 : Molecular Function : protein-N-terminal asparagine amidohydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 11.5, nucl 10.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017570)
HIX0017570
HIT000679577 (
ENST00000566542
)
(Protein N-terminal asparagine amidohydrolase isoform 2.)
genome : 15,131,711 - 15,139,911 (8,201)
query : 1 - 2,398 (2,398/2,398)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 11.5, nucl 10.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017570)
HIX0017570
HIT000678276 (
ENST00000565187
)
(Protein N-terminal asparagine amidohydrolase isoform 2.)
genome : 15,131,731 - 15,149,884 (18,154)
query : 1 - 1,043 (1,043/1,043)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, nucl 11, cyto 10, cysk 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017570)
HIX0017570
HIT000681705 (
ENST00000568738
)
(Protein N-terminal asparagine amidohydrolase isoform 2.)
genome : 15,132,002 - 15,141,351 (9,350)
query : 1 - 439 (439/439)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 22, cyto_nucl 6, nucl 4, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017570)
HIX0017570
HIT000681304 (
ENST00000568320
)
(Protein N-terminal asparagine amidohydrolase isoform 2.)
genome : 15,132,431 - 15,149,911 (17,481)
query : 1 - 667 (667/667)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 10, cyto 8.5, cyto_nucl 8.5, nucl 5.5, extr 5,
cysk_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017570)
HIX0017570
HIT000679456 (
ENST00000566419
)
(Protein N-terminal asparagine amidohydrolase isoform 1.)
genome : 15,132,433 - 15,149,896 (17,464)
query : 1 - 738 (738/738)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11, extr 10, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017570)
HIX0017570
HIT000683199 (
ENST00000570292
)
(Protein N-terminal asparagine amidohydrolase isoform 2.)
genome : 15,132,465 - 15,134,324 (1,860)
query : 1 - 579 (579/579)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19.5, extr_plas 11, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017570)
HIX0017570
HIT000677078 (
ENST00000563940
)
(Protein N-terminal asparagine amidohydrolase isoform 1.)
genome : 15,135,480 - 15,149,774 (14,295)
query : 1 - 354 (354/354)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 8, cyto 7.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017570)
HIX0017570
HIT000680051 (
ENST00000567030
)
(Protein N-terminal asparagine amidohydrolase; EC=3.5.1.-; Protein NH2-terminal asparagine amidohydrolase; PNAA; Protein NH2-terminal asparagine deamidase; PNAD; Protein N-terminal Asn amidase; Protein NTN-amidase;)
genome : 15,141,073 - 15,149,800 (8,728)
query : 1 - 454 (454/454)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 7.5, cyto 7, cyto_pero 6.5, mito 5,
nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017570)
HIX0017570
HIT000680430 (
ENST00000567420
)
(Protein N-terminal asparagine amidohydrolase isoform 1.)
genome : 15,141,285 - 15,149,644 (8,360)
query : 1 - 339 (339/339)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 10, cyto 9.5, cyto_pero 7.33333,
nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017570)
HIX0021269
HIT000246217
(
AJ272050
)
(RNA polymerase I-specific transcription initiation factor RRN3; Transcription initiation factor IA; TIF-IA;)
genome : 15,153,880 - 15,188,112 (34,233)
query : 1 - 3,700 (3,700/3,756)
18 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;0.995;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007991 : RNA polymerase I specific transcription initiation factor RRN3
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 9, cyto_nucl 8.5, pero 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021269)
HIX0021269
HIT000207231 (
NM_018427
)
(RNA polymerase I-specific transcription initiation factor RRN3; Transcription initiation factor IA; TIF-IA;)
genome : 15,153,880 - 15,188,158 (34,279)
query : 1 - 3,745 (3,745/3,762)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 9, cyto_nucl 8.5, pero 5, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021269)
HIX0021269
HIT000094271
(
BC036182
)
(RNA polymerase I-specific transcription initiation factor RRN3; Transcription initiation factor IA; TIF-IA;)
genome : 15,153,880 - 15,188,104 (34,225)
query : 4 - 3,694 (3,691/3,709)
18 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;1.000;1.000;1.000;1.000;0.992;
0.989;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR007991 : RNA polymerase I specific transcription initiation factor RRN3
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto 9, cyto_nucl 7.5, pero 6, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021269)
HIX0021269
HIT000384792
(
AK225662
)
(RNA polymerase I-specific transcription initiation factor RRN3.)
genome : 15,153,892 - 15,188,168 (34,277)
query : 1 - 2,127 (2,127/2,143)
19 exons
identity = 0.999
3'(1.000;0.991;1.000;1.000;0.991;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007991 : RNA polymerase I specific transcription initiation factor RRN3
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 10, mito 9, nucl 4, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021269)
HIX0021269
HIT000102683 (
ENST00000198767
)
(RNA polymerase I-specific transcription initiation factor RRN3; Transcription initiation factor IA; TIF-IA;)
genome : 15,153,879 - 15,188,174 (34,296)
query : 1 - 3,762 (3,762/3,762)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 9, cyto_nucl 8.5, pero 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021269)
HIX0021269
HIT000676705 (
ENST00000563559
)
(RNA polymerase I-specific transcription initiation factor RRN3.)
genome : 15,153,892 - 15,188,168 (34,277)
query : 1 - 2,128 (2,128/2,128)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, mito 9, cyto_nucl 9, pero 5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021269)
HIX0021269
HIT000024502
(
AL110238
)
(Hypothetical short protein.)
genome : 15,153,893 - 15,154,810 (918)
query : 3 - 920 (918/920)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, cyto 10, extr_plas 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021269)
HIX0021269
HIT000264681
(
BC071868
)
(RNA polymerase I-specific transcription initiation factor RRN3.)
genome : 15,154,206 - 15,173,954 (19,749)
query : 3 - 2,688 (2,686/2,705)
10 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR007991 : RNA polymerase I specific transcription initiation factor RRN3
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13, nucl 5.5, mito 4, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021269)
HIX0021269
HIT000390743
(
BC132688
)
Representative transcript
(RNA polymerase I-specific transcription initiation factor RRN3; Transcription initiation factor IA; TIF-IA;)
genome : 15,154,746 - 15,188,109 (33,364)
query : 1 - 2,830 (2,830/2,830)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007991 : RNA polymerase I specific transcription initiation factor RRN3
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 9, cyto_nucl 8.5, pero 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021269)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720184
Mus
sp. (Mouse) : AK080680
Rattus
sp. (Rat) : BC091175
Pongo
sp. (Orangutan) : CR861206
Pan
sp. (Chimpanzee) : ENSPTRT00000014360
Tetraodon
sp. (Tetraodon) : GSTENT00019339001
Takifugu
sp. (Fugu) : SINFRUT00000138144
Macaca
sp. (Macaque) : XM_001108222
Monodelphis
sp. (Opossum) : XM_001375054
Equus
sp. (Horse) : XM_001488925
Canis
sp. (Dog) : XM_536965
Bos
sp. (Cow) : XM_594080
Danio
sp. (Zebrafish) : XM_701870
HIX0021269
HIT000390745
(
BC132690
)
(RNA polymerase I-specific transcription initiation factor RRN3; Transcription initiation factor IA; TIF-IA;)
genome : 15,154,746 - 15,188,109 (33,364)
query : 1 - 2,830 (2,830/2,830)
18 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007991 : RNA polymerase I specific transcription initiation factor RRN3
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 9, cyto_nucl 8.5, pero 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021269)
HIX0021269
HIT000490110
(
AK295486
)
(RNA polymerase I-specific transcription initiation factor RRN3.)
genome : 15,155,236 - 15,185,208 (29,973)
query : 1 - 2,016 (2,016/2,016)
15 exons
identity = 0.999
3'(1.000;1.000;1.000;0.991;1.000;1.000;1.000;
1.000;1.000;0.990;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR007991 : RNA polymerase I specific transcription initiation factor RRN3
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021269)
HIX0021269
HIT000500133
(
AK316520
)
(RNA polymerase I-specific transcription initiation factor RRN3.)
genome : 15,155,285 - 15,188,106 (32,822)
query : 1 - 2,198 (2,198/2,198)
17 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;0.989;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007991 : RNA polymerase I specific transcription initiation factor RRN3
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, mito 10, cyto_nucl 8.5, pero 4, extr 3,
nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021269)
HIX0021269
HIT000527685 (
ENST00000429751
)
(RNA polymerase I-specific transcription initiation factor RRN3; Transcription initiation factor IA; TIF-IA;)
genome : 15,155,285 - 15,188,106 (32,822)
query : 1 - 2,198 (2,198/2,198)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 10, cyto_nucl 8, nucl 4, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021269)
HIX0021269
HIT000497618
(
AK302994
)
(RNA polymerase I-specific transcription initiation factor RRN3.)
genome : 15,155,443 - 15,180,312 (24,870)
query : 1 - 1,863 (1,863/1,863)
15 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR007991 : RNA polymerase I specific transcription initiation factor RRN3
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11.5, cysk 5, nucl 3, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021269)
HIX0021269
HIT000124923 (
ENST00000327307
)
(RNA polymerase I-specific transcription initiation factor RRN3.)
genome : 15,155,486 - 15,187,865 (32,380)
query : 1 - 2,039 (2,039/2,039)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 13.5, nucl 4.5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021269)
HIX0021269
HIT000499480
(
AK304856
)
(RNA polymerase I-specific transcription initiation factor RRN3.)
genome : 15,155,486 - 15,187,865 (32,380)
query : 1 - 2,039 (2,039/2,039)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007991 : RNA polymerase I specific transcription initiation factor RRN3
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 13.5, nucl 4.5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021269)
HIX0021269
HIT000494877
(
AK300253
)
(RNA polymerase I-specific transcription initiation factor RRN3.)
genome : 15,155,520 - 15,188,101 (32,582)
query : 1 - 1,958 (1,958/1,958)
17 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.990)5'
coverage = 1.000
InterPro :
IPR007991 : RNA polymerase I specific transcription initiation factor RRN3
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28.5, cyto_mito 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021269)
HIX0021269
HIT000074458
(
AF227156
)
(RNA polymerase I-specific transcription initiation factor RRN3; Transcription initiation factor IA; TIF-IA;)
genome : 15,155,557 - 15,188,158 (32,602)
query : 1 - 2,068 (2,068/2,068)
18 exons
identity = 1.000
3'(1.000;0.989;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007991 : RNA polymerase I specific transcription initiation factor RRN3
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 9, cyto_nucl 8.5, pero 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021269)
HIX0021269
HIT000498029
(
AK303405
)
(RNA polymerase I-specific transcription initiation factor RRN3.)
genome : 15,155,595 - 15,180,257 (24,663)
query : 1 - 1,557 (1,557/1,557)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.992;1.000)5'
coverage = 1.000
InterPro :
IPR007991 : RNA polymerase I specific transcription initiation factor RRN3
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 26, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021269)
HIX0021269
HIT000639507 (
ENST00000540462
)
(RNA polymerase I-specific transcription initiation factor RRN3.)
genome : 15,155,595 - 15,180,257 (24,663)
query : 1 - 1,557 (1,557/1,557)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 26, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021269)
HIX0021269
HIT000433635
(
AK314769
)
(RNA polymerase I-specific transcription initiation factor RRN3; Transcription initiation factor IA; TIF-IA;)
genome : 15,155,601 - 15,188,106 (32,506)
query : 1 - 1,972 (1,972/1,972)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007991 : RNA polymerase I specific transcription initiation factor RRN3
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 9, cyto_nucl 8.5, pero 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021269)
HIX0021269
HIT000674901 (
ENST00000561685
)
(RNA polymerase I-specific transcription initiation factor RRN3.)
genome : 15,168,534 - 15,177,607 (9,074)
query : 1 - 615 (615/615)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13.3333, cyto_plas 8.83333,
nucl 7, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021269)
HIX0021269
HIT000337810
(
BC104660
)
(RNA polymerase I-specific transcription initiation factor RRN3.)
genome : 15,170,297 - 15,188,110 (17,814)
query : 5 - 1,000 (996/1,030)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.994
InterPro :
IPR007991 : RNA polymerase I specific transcription initiation factor RRN3
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 10, mito 8, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021269)
HIX0021269
HIT000677264 (
ENST00000564131
)
(RNA polymerase I-specific transcription initiation factor RRN3.)
genome : 15,170,292 - 15,188,110 (17,819)
query : 1 - 1,001 (1,001/1,001)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 10, mito 8, pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021269)
HIX0019192
HIT000007428
(
AK024154
)
Representative transcript
(PDZ and LIM domain protein 5 isoform i.)
genome : 15,170,854 - 15,173,005 (2,152)
query : 1 - 2,152 (2,152/2,152)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14.5, cyto 5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019192)
HIX0021269
HIT000017662
(
AK092795
)
(RNA polymerase I-specific transcription initiation factor RRN3.)
genome : 15,173,468 - 15,175,408 (1,941)
query : 1 - 1,943 (1,943/1,943)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 1.000
InterPro :
IPR007991 : RNA polymerase I specific transcription initiation factor RRN3
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12.8333, cyto_plas 10.1667,
extr 5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021269)
HIX0026959
HIT000045186
(
AK125313
)
Representative transcript
(Group 10 secretory phospholipase A2; EC=3.1.1.4; Group X secretory phospholipase A2; GX sPLA2; sPLA2-X; Phosphatidylcholine 2-acylhydrolase 10; Precursor;)
genome : 15,188,268 - 15,203,054 (14,787)
query : 1 - 2,598 (2,598/2,598)
4 exons
identity = 0.999
5'(1.000;1.000;0.995;0.999)3'
coverage = 1.000
EC number :
EC 3.1.1.4
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00590 : Arachidonic acid metabolism (26)
00591 : Linoleic acid metabolism (11)
00592 : alpha-Linolenic acid metabolism (10)
01100 : Metabolic pathways (1346)
InterPro :
IPR001211 : Phospholipase A2
IPR013090 : Phospholipase A2, active site
IPR016090 : Phospholipase A2 domain
GO :
0004623 : Molecular Function : phospholipase A2 activity
0005509 : Molecular Function : calcium ion binding
0006644 : Biological Process : phospholipid metabolic process
0016042 : Biological Process : lipid catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto_nucl 5.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026959)
HIX0026959
HIT000682784 (
ENST00000569858
)
(Group 10 secretory phospholipase A2; EC=3.1.1.4; Group X secretory phospholipase A2; GX sPLA2; sPLA2-X; Phosphatidylcholine 2-acylhydrolase 10; Precursor;)
genome : 15,188,268 - 15,203,054 (14,787)
query : 1 - 2,598 (2,598/2,598)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.1.4
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00590 : Arachidonic acid metabolism (26)
00591 : Linoleic acid metabolism (11)
00592 : alpha-Linolenic acid metabolism (10)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto_nucl 5.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026959)
HIX0026959
HIT000702066_06 (
ENST00000590231
)
(Group 10 secretory phospholipase A2; EC=3.1.1.4; Group X secretory phospholipase A2; GX sPLA2; sPLA2-X; Phosphatidylcholine 2-acylhydrolase 10; Precursor;)
genome : 15,197,107 - 15,197,214 (108)
query : 1 - 108 (108/108)
1 exon
identity = 0.972
5'(0.972)3'
coverage = 1.000
EC number :
EC 3.1.1.4
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00590 : Arachidonic acid metabolism (26)
00591 : Linoleic acid metabolism (11)
00592 : alpha-Linolenic acid metabolism (10)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 7, cyto_nucl 6.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026959)
HIX0026959
HIT000682209_06 (
ENST00000569264
)
(Group 10 secretory phospholipase A2; EC=3.1.1.4; Group X secretory phospholipase A2; GX sPLA2; sPLA2-X; Phosphatidylcholine 2-acylhydrolase 10; Precursor;)
genome : 15,197,107 - 15,197,212 (106)
query : 1 - 106 (106/106)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 3.1.1.4
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00590 : Arachidonic acid metabolism (26)
00591 : Linoleic acid metabolism (11)
00592 : alpha-Linolenic acid metabolism (10)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto_nucl 4, nucl 3.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026959)
HIX0202314
HIT000050356
(
AK131085
)
(Polycystin-1; Autosomal dominant polycystic kidney disease 1 protein; Precursor;)
genome : 15,198,171 - 15,229,013 (30,843)
query : 1 - 5,381 (5,381/5,381)
23 exons
identity = 0.980
3'(1.000;0.991;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.972;
0.941;0.980;1.000;0.994;0.997;0.909;1.000;
1.000;0.993)5'
coverage = 1.000
InterPro :
IPR000434 : Polycystic kidney disease type 1 protein
IPR001024 : PLAT/LH2 domain
IPR008976 : Lipase/lipooxygenase, PLAT/LH2
GO :
0005515 : Molecular Function : protein binding
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202314)
HIX0202314
HIT000050355
(
AK131084
)
Representative transcript
(Nuclear pore complex interacting protein family member.)
genome : 15,198,177 - 15,229,270 (31,094)
query : 1 - 5,537 (5,537/5,537)
24 exons
identity = 0.984
3'(1.000;0.990;1.000;1.000;1.000;0.991;0.993;
1.000;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000;1.000;1.000;1.000;0.859;1.000;
1.000;1.000;0.996)5'
coverage = 1.000
InterPro :
IPR000203 : GPS motif
IPR000434 : Polycystic kidney disease type 1 protein
IPR001024 : PLAT/LH2 domain
IPR008976 : Lipase/lipooxygenase, PLAT/LH2
GO :
0005515 : Molecular Function : protein binding
0007218 : Biological Process : neuropeptide signaling pathway
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202314)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : ENSDART00000045361
Tetraodon
sp. (Tetraodon) : GSTENT00026282001
Takifugu
sp. (Fugu) : SINFRUT00000176226
Monodelphis
sp. (Opossum) : XM_001366899
HIX0202314
HIT000633845 (
ENST00000534799
)
(Nuclear pore complex-interacting protein-like 3.)
genome : 15,198,178 - 15,215,759 (17,582)
query : 1 - 1,205 (1,205/1,205)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 14, nucl 5, mito 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202314)
HIX0202314
HIT000661279 (
ENST00000547107
)
(Nuclear pore complex-interacting protein-like 1-like.)
genome : 15,198,187 - 15,217,355 (19,169)
query : 1 - 1,071 (1,071/1,071)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 5, nucl 3, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202314)
HIX0202314
HIT000312465 (
ENST00000358815
)
(Polycystin-1; Autosomal dominant polycystic kidney disease 1 protein; Precursor;)
genome : 15,198,580 - 15,225,458 (26,879)
query : 1 - 2,901 (2,901/2,901)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202314)
HIX0202314
HIT000497332
(
AK302708
)
(Polycystin-1; Autosomal dominant polycystic kidney disease 1 protein; Precursor;)
genome : 15,198,580 - 15,225,458 (26,879)
query : 1 - 2,902 (2,902/2,902)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000203 : GPS motif
IPR000434 : Polycystic kidney disease type 1 protein
IPR001024 : PLAT/LH2 domain
IPR008976 : Lipase/lipooxygenase, PLAT/LH2
GO :
0005515 : Molecular Function : protein binding
0007218 : Biological Process : neuropeptide signaling pathway
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202314)
HIX0202314
HIT000545948 (
ENST00000448014
)
(Polycystin-1; Autosomal dominant polycystic kidney disease 1 protein; Precursor;)
genome : 15,198,580 - 15,225,458 (26,879)
query : 1 - 2,902 (2,902/2,902)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202314)
HIX0026959
HIT000089475
(
BC017937
)
(Conserved hypothetical protein.)
genome : 15,201,729 - 15,203,514 (1,786)
query : 1 - 1,786 (1,786/1,815)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11, cyto_nucl 9, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026959)
HIX0026959
HIT000459721_05
(
DQ593190
)
(Non-protein coding transcript.)
genome : 15,201,790 - 15,201,819 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026959)
HIX0026959
HIT000445725_03
(
DQ579194
)
(Non-protein coding transcript.)
genome : 15,203,077 - 15,203,107 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026959)
HIX0202314
HIT000545945 (
ENST00000448011
)
(Nuclear pore complex-interacting protein-like 1; Precursor;)
genome : 15,204,359 - 15,213,071 (8,713)
query : 1 - 575 (575/575)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, nucl 3, mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202314)
HIX0202314
HIT000132931 (
ENST00000340301
)
(Polycystin-1; Autosomal dominant polycystic kidney disease 1 protein; Precursor;)
genome : 15,204,648 - 15,219,805 (15,158)
query : 1 - 547 (547/547)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, mito 3, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202314)
HIX0202314
HIT000136368 (
ENST00000343738
)
(Polycystin-1 isoform 2 precursor.)
genome : 15,219,099 - 15,248,421 (29,323)
query : 1 - 4,769 (4,769/4,769)
24 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.976;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202314)
HIX0202314
HIT000099011
(
BC048794
)
(Polycystin-1 isoform 2 precursor.)
genome : 15,220,530 - 15,225,356 (4,827)
query : 1 - 2,479 (2,479/2,493)
8 exons
identity = 0.999
3'(0.998;1.000;0.993;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000203 : GPS motif
IPR000434 : Polycystic kidney disease type 1 protein
IPR001024 : PLAT/LH2 domain
IPR008976 : Lipase/lipooxygenase, PLAT/LH2
GO :
0005515 : Molecular Function : protein binding
0007218 : Biological Process : neuropeptide signaling pathway
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, mito 6, E.R. 3, cyto_mito 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202314)
HIX0202314
HIT000522067 (
ENST00000424133
)
(Polycystin-1 isoform 2 precursor.)
genome : 15,220,530 - 15,225,356 (4,827)
query : 1 - 2,479 (2,479/2,493)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, mito 6, E.R. 3, cyto_mito 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202314)
HIX0202314
HIT000497884
(
AK303260
)
(Polycystin-1; Autosomal dominant polycystic kidney disease 1 protein; Precursor;)
genome : 15,220,742 - 15,224,971 (4,230)
query : 1 - 1,869 (1,869/1,869)
8 exons
identity = 0.998
3'(0.997;1.000;0.993;1.000;1.000;0.996;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000203 : GPS motif
IPR000434 : Polycystic kidney disease type 1 protein
IPR001024 : PLAT/LH2 domain
IPR008976 : Lipase/lipooxygenase, PLAT/LH2
GO :
0005515 : Molecular Function : protein binding
0007218 : Biological Process : neuropeptide signaling pathway
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202314)
HIX0202314
HIT000645403 (
ENST00000546358
)
(Polycystin-1; Autosomal dominant polycystic kidney disease 1 protein; Precursor;)
genome : 15,226,577 - 15,227,702 (1,126)
query : 1 - 579 (579/579)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11.5, cyto_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202314)
HIX0202314
HIT000639120 (
ENST00000540075
)
(Polycystin-1; Autosomal dominant polycystic kidney disease 1 protein; Precursor;)
genome : 15,226,700 - 15,227,714 (1,015)
query : 1 - 656 (656/656)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 6, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202314)
HIX0202314
HIT000639547 (
ENST00000540502
)
(Polycystin-1; Autosomal dominant polycystic kidney disease 1 protein; Precursor;)
genome : 15,227,345 - 15,229,010 (1,666)
query : 1 - 764 (764/764)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202314)
HIX0202314
HIT000637145 (
ENST00000538100
)
(Polycystin-1; Autosomal dominant polycystic kidney disease 1 protein; Precursor;)
genome : 15,229,161 - 15,231,013 (1,853)
query : 1 - 705 (705/705)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 10, cyto 8.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202314)
HIX0173386
HIT000465003_08
(
DQ598472
)
Representative transcript
(Non-protein coding transcript.)
genome : 15,247,397 - 15,247,426 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173386)
HIX0212268
HIT000659825 (
NR_037466
)
(Hypothetical short protein.)
genome : 15,248,707 - 15,248,859 (153)
query : 1 - 153 (153/153)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212268)
HIX0212268
HIT000694119 (
ENST00000582223
)
(Hypothetical short protein.)
genome : 15,248,707 - 15,248,859 (153)
query : 1 - 153 (153/153)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212268)
HIX0212268
HIT000665556 (
ENST00000552015
)
(Conserved hypothetical protein.)
genome : 15,248,760 - 15,250,877 (2,118)
query : 1 - 2,118 (2,118/2,118)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, plas 7, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212268)
HIX0223974
HIT000690828 (
ENST00000578891
)
(Non-protein coding transcript.)
genome : 15,252,314 - 15,252,378 (65)
query : 1 - 65 (65/65)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223974)
HIX0173368
HIT000456464_06
(
DQ589933
)
Representative transcript
(Non-protein coding transcript.)
genome : 15,252,452 - 15,252,481 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173368)
HIX0223197
HIT000677152_01 (
ENST00000564015
)
(Hypothetical protein.)
genome : 15,452,836 - 15,456,527 (3,692)
query : 1 - 258 (258/258)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, nucl 10, cyto 6, mito_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223197)
HIX0223197
HIT000702066_07 (
ENST00000590231
)
(Phospholipase A2 domain containing protein.)
genome : 15,456,422 - 15,456,529 (108)
query : 1 - 108 (108/108)
1 exon
identity = 0.972
5'(0.972)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 7, cyto_nucl 6.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223197)
HIX0223197
HIT000682209_07 (
ENST00000569264
)
(Phospholipase A2 family protein.)
genome : 15,456,422 - 15,456,527 (106)
query : 1 - 106 (106/106)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto_nucl 4, nucl 3.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223197)
HIX0212003
HIT000725417 (
NM_001277325
)
(Nuclear pore complex interacting protein family protein.)
genome : 15,457,481 - 15,472,151 (14,671)
query : 1 - 1,088 (1,088/1,088)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, mito 5, nucl 2.5,
E.R._mito 2.5, mito_pero 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212003)
HIX0212003
HIT000313576 (
ENST00000360151
)
(Nuclear pore complex interacting protein family protein.)
genome : 15,457,516 - 15,472,151 (14,636)
query : 1 - 1,053 (1,053/1,053)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, mito 5, nucl 2.5,
E.R._mito 2.5, mito_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212003)
HIX0212003
HIT000642846_01 (
ENST00000543801
)
(Nuclear pore complex interacting protein family protein.)
genome : 15,457,815 - 15,472,151 (14,337)
query : 1 - 824 (824/824)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 10.5, extr 7, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212003)
HIX0212003
HIT000626898_02 (
ENST00000527703
)
(Nuclear pore complex interacting protein family protein.)
genome : 15,457,815 - 15,463,651 (5,837)
query : 1 - 470 (470/470)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 8, cyto 8, mito_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212003)
HIX0212003
HIT000530504 (
ENST00000432570
)
(Conserved hypothetical protein.)
genome : 15,458,702 - 15,463,926 (5,225)
query : 1 - 984 (984/984)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212003)
HIX0212003
HIT000640638_01 (
ENST00000541593
)
(Nuclear pore complex interacting protein family protein.)
genome : 15,458,733 - 15,472,151 (13,419)
query : 1 - 699 (699/699)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 10.5, extr 7, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212003)
HIX0212003
HIT000633158 (
ENST00000534094
)
(Conserved hypothetical protein.)
genome : 15,459,031 - 15,474,904 (15,874)
query : 1 - 954 (954/954)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212003)
HIX0212003
HIT000627483_01 (
ENST00000528301
)
(Hypothetical protein.)
genome : 15,459,172 - 15,467,678 (8,507)
query : 1 - 671 (671/671)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 11.5, cyto_mito 8, cyto 3.5, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212003)
HIX0212003
HIT000112315_02 (
ENST00000283050
)
(Hypothetical protein.)
genome : 15,460,387 - 15,467,634 (7,248)
query : 1 - 539 (539/539)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 17, extr 8, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212003)
HIX0212003
HIT000625380_01 (
ENST00000526166
)
(Hypothetical protein.)
genome : 15,460,387 - 15,467,634 (7,248)
query : 1 - 539 (539/539)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 17, extr 8, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212003)
HIX0212093
HIT000445725_04
(
DQ579194
)
Representative transcript
(Non-protein coding transcript.)
genome : 15,462,399 - 15,462,429 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212093)
HIX0212088
HIT000439582_02
(
DQ573051
)
Representative transcript
(Non-protein coding transcript.)
genome : 15,475,543 - 15,475,572 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212088)
HIX0212128
HIT000462471_04
(
DQ595940
)
Representative transcript
(Non-protein coding transcript.)
genome : 15,476,073 - 15,476,102 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212128)
HIX0212139
HIT000464446_04
(
DQ597915
)
Representative transcript
(Non-protein coding transcript.)
genome : 15,476,722 - 15,476,751 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212139)
HIX0202283
HIT000215087 (
NM_173803
)
(Mpv17-like protein; M-LP homolog; M-LPH;)
genome : 15,489,611 - 15,503,543 (13,933)
query : 1 - 2,238 (2,238/2,238)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 9, cyto 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202283)
HIX0202283
HIT000559452 (
NM_001128423
)
(Mpv17-like protein; M-LP homolog; M-LPH;)
genome : 15,489,611 - 15,503,543 (13,933)
query : 1 - 2,309 (2,309/2,309)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 6, nucl 3, cyto_plas 3, cyto_golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202283)
HIX0202283
HIT000340906
(
DQ004255
)
Representative transcript
(Mpv17-like protein; M-LP homolog; M-LPH;)
genome : 15,489,611 - 15,503,539 (13,929)
query : 1 - 2,304 (2,304/2,304)
4 exons
identity = 0.999
5'(0.998;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR007248 : Mpv17/PMP22
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 6, nucl 3, cyto_plas 3, cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202283)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK136449
Oryzias
sp. (Medaka) : ENSORLT00000000979
Oryzias
sp. (Medaka) : ENSORLT00000017103
Pongo
sp. (Orangutan) : ENSPPYT00000009044
Rattus
sp. (Rat) : ENSRNOT00000004384
Takifugu
sp. (Fugu) : SINFRUT00000172410
Takifugu
sp. (Fugu) : SINFRUT00000181593
Macaca
sp. (Macaque) : XM_001108380
Monodelphis
sp. (Opossum) : XM_001375005
Pan
sp. (Chimpanzee) : XM_520595
Danio
sp. (Zebrafish) : XM_686547
HIX0202283
HIT000340907
(
DQ004256
)
(Mpv17-like protein; M-LP homolog; M-LPH;)
genome : 15,489,611 - 15,503,539 (13,929)
query : 1 - 2,233 (2,233/2,233)
3 exons
identity = 0.999
5'(0.998;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR007248 : Mpv17/PMP22
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 9, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202283)
HIX0202283
HIT000112866 (
ENST00000287594
)
(Mpv17-like protein; M-LP homolog; M-LPH;)
genome : 15,489,611 - 15,503,458 (13,848)
query : 1 - 2,153 (2,153/2,153)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 9, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202283)
HIX0202283
HIT000021773
(
AK096918
)
(Mpv17-like protein; M-LP homolog; M-LPH;)
genome : 15,489,636 - 15,503,543 (13,908)
query : 1 - 2,211 (2,211/2,211)
3 exons
identity = 0.999
5'(1.000;0.967;0.999)3'
coverage = 1.000
InterPro :
IPR007248 : Mpv17/PMP22
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12, extr 9, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202283)
HIX0202283
HIT000479732 (
ENST00000396385
)
(Mpv17-like protein; M-LP homolog; M-LPH;)
genome : 15,489,636 - 15,502,296 (12,661)
query : 1 - 1,037 (1,037/1,037)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 6, nucl 3, cyto_plas 3, cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202283)
HIX0202283
HIT000488004
(
AK293380
)
(Mpv17-like protein; M-LP homolog; M-LPH;)
genome : 15,489,636 - 15,502,296 (12,661)
query : 1 - 1,037 (1,037/1,037)
4 exons
identity = 0.999
5'(0.998;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007248 : Mpv17/PMP22
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 6, nucl 3, cyto_plas 3, cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202283)
HIX0202283
HIT000260192
(
BC061514
)
(Mpv17-like protein; M-LP homolog; M-LPH;)
genome : 15,489,662 - 15,502,251 (12,590)
query : 1 - 894 (894/908)
3 exons
identity = 0.999
5'(1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR007248 : Mpv17/PMP22
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 9, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202283)
HIX0202283
HIT000677280 (
ENST00000564148
)
(Mpv17-like protein isoform 1.)
genome : 15,489,941 - 15,501,975 (12,035)
query : 1 - 529 (529/529)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 5, cyto 3.5, cyto_nucl 3.5,
mito_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202283)
HIX0038689
HIT000066085
(
AF075063
)
Representative transcript
(Non-protein coding transcript.)
genome : 15,506,577 - 15,507,122 (546)
query : 1 - 548 (548/557)
1 exon
identity = 0.989
5'(0.989)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038689)
HIX0038689
HIT000679764 (
ENST00000566734
)
(Conserved hypothetical protein.)
genome : 15,506,577 - 15,507,125 (549)
query : 1 - 549 (549/549)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 6, plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038689)
HIX0012832
HIT000115513 (
ENST00000300006
)
(Uncharacterized protein C16orf45;)
genome : 15,528,152 - 15,682,116 (153,965)
query : 1 - 2,404 (2,404/2,404)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.8333, cyto_pero 9.5, extr 6,
nucl 4.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012832)
HIX0012832
HIT000211207 (
NM_033201
)
(Uncharacterized protein C16orf45;)
genome : 15,528,325 - 15,682,116 (153,792)
query : 1 - 2,231 (2,231/2,234)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.8333, cyto_pero 9.5, extr 6,
nucl 4.5, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012832)
HIX0012832
HIT000013794
(
AK057180
)
Representative transcript
(Uncharacterized protein C16orf45;)
genome : 15,528,325 - 15,681,917 (153,593)
query : 1 - 2,032 (2,032/2,032)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR022735 : Domain of unknown function DUF3585
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.8333, cyto_pero 9.5, extr 6,
nucl 4.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012832)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK139470
Bos
sp. (Cow) : BC126524
Danio
sp. (Zebrafish) : BC133142
Oryzias
sp. (Medaka) : ENSORLT00000017091
Pongo
sp. (Orangutan) : ENSPPYT00000009038
Rattus
sp. (Rat) : ENSRNOT00000004346
Tetraodon
sp. (Tetraodon) : GSTENT00011845001
Takifugu
sp. (Fugu) : SINFRUT00000146248
Macaca
sp. (Macaque) : XM_001108606
Pan
sp. (Chimpanzee) : XM_001149500
Monodelphis
sp. (Opossum) : XM_001366063
Equus
sp. (Horse) : XM_001916309
Canis
sp. (Dog) : XM_846712
HIX0012832
HIT000679526 (
ENST00000566490
)
(Uncharacterized protein C16orf45;)
genome : 15,528,332 - 15,681,829 (153,498)
query : 1 - 1,854 (1,854/1,854)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 10.3333, cyto_pero 9.83333, extr 7,
mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012832)
HIX0012832
HIT000488055
(
AK293431
)
(Uncharacterized protein C16orf45;)
genome : 15,528,352 - 15,681,084 (152,733)
query : 1 - 1,106 (1,106/1,106)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR022735 : Domain of unknown function DUF3585
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 11.5, cyto 9, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012832)
HIX0012832
HIT000683158 (
ENST00000570249
)
(Uncharacterized protein C16orf45;)
genome : 15,528,393 - 15,675,175 (146,783)
query : 1 - 622 (622/622)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_plas 13.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012832)
HIX0012832
HIT000050504
(
BC008967
)
(Uncharacterized protein C16orf45;)
genome : 15,528,395 - 15,681,918 (153,524)
query : 1 - 1,963 (1,963/1,980)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR022735 : Domain of unknown function DUF3585
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.8333, cyto_pero 9.5, extr 6,
nucl 4.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012832)
HIX0012832
HIT000675028 (
ENST00000561813
)
(Uncharacterized protein C16orf45;)
genome : 15,528,425 - 15,677,095 (148,671)
query : 1 - 737 (737/737)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13, extr 8, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012832)
HIX0012832
HIT000680556 (
ENST00000567550
)
(Uncharacterized protein C16orf45;)
genome : 15,528,445 - 15,675,249 (146,805)
query : 1 - 546 (546/546)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 10.8333, cyto_pero 10.6667,
extr 8, pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012832)
HIX0012832
HIT000560604 (
NM_001142469
)
(Uncharacterized protein C16orf45;)
genome : 15,596,123 - 15,682,116 (85,994)
query : 1 - 2,050 (2,050/2,053)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 9.33333, extr 8, cyto_pero 7.83333,
nucl 4.5, mito 4, extr_plas 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012832)
HIX0012832
HIT000050848
(
BC023603
)
(Uncharacterized protein C16orf45;)
genome : 15,596,123 - 15,681,918 (85,796)
query : 1 - 1,852 (1,852/1,870)
6 exons
identity = 0.999
5'(0.991;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR022735 : Domain of unknown function DUF3585
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 9.33333, extr 8, cyto_pero 7.83333,
nucl 4.5, mito 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012832)
HIX0012832
HIT000550125 (
ENST00000452191
)
(Uncharacterized protein C16orf45;)
genome : 15,596,123 - 15,681,918 (85,796)
query : 1 - 1,852 (1,852/1,865)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 9.33333, extr 8, cyto_pero 7.83333,
nucl 4.5, mito 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012832)
HIX0012832
HIT000677513 (
ENST00000564389
)
(Uncharacterized protein C16orf45;)
genome : 15,609,162 - 15,681,705 (72,544)
query : 1 - 749 (749/749)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, extr 4, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012832)
HIX0012832
HIT000674908 (
ENST00000561692
)
(Uncharacterized protein C16orf45;)
genome : 15,609,200 - 15,678,039 (68,840)
query : 1 - 534 (534/534)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 16, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012832)
HIX0012832
HIT000676538 (
ENST00000563380
)
(Hypothetical short protein.)
genome : 15,626,900 - 15,630,805 (3,906)
query : 1 - 462 (462/462)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012832)
HIX0012832
HIT000678915 (
ENST00000565857
)
(Uncharacterized protein C16orf45;)
genome : 15,661,840 - 15,718,885 (57,046)
query : 1 - 497 (497/497)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, nucl 3, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012832)
HIX0012832
HIT000678969 (
ENST00000565913
)
(Uncharacterized protein C16orf45;)
genome : 15,670,991 - 15,681,214 (10,224)
query : 1 - 934 (934/934)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012832)
HIX0012832
HIT000049881
(
AK130610
)
(Uncharacterized protein C16orf45;)
genome : 15,675,635 - 15,677,434 (1,800)
query : 1 - 1,800 (1,800/1,800)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012832)
HIX0012832
HIT000017790
(
AK092923
)
(Uncharacterized protein C16orf45;)
genome : 15,676,181 - 15,678,414 (2,234)
query : 1 - 2,235 (2,235/2,235)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012832)
HIX0222990
HIT000044437
(
AK124564
)
Representative transcript
(Meiosis arrest female protein 1 family protein.)
genome : 15,688,245 - 15,695,720 (7,476)
query : 1 - 4,157 (4,157/4,157)
3 exons
identity = 1.000
3'(1.000;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR024768 : Meiosis arrest female protein 1
GO :
0005777 : Cellular Component : peroxisome
0010468 : Biological Process : regulation of gene expression
0048477 : Biological Process : oogenesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.3333, nucl 9, mito 8, cyto 7.5, extr 6,
cyto_pero 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222990)
HIX0222990
HIT000666213 (
ENST00000552771
)
(Meiosis arrest female protein 1 family protein.)
genome : 15,688,245 - 15,695,720 (7,476)
query : 1 - 4,157 (4,157/4,157)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.3333, nucl 9, mito 8, cyto 7.5, extr 6,
cyto_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222990)
HIX0222990
HIT000389367
(
BC127740
)
(Hypothetical short protein.)
genome : 15,689,409 - 15,689,834 (426)
query : 12 - 438 (427/442)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 0.966
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14.5, nucl 9.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222990)
HIX0222990
HIT000665432 (
ENST00000551878
)
(Conserved hypothetical protein.)
genome : 15,690,492 - 15,694,317 (3,826)
query : 1 - 600 (600/600)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 5.5, cyto_nucl 5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222990)
HIX0222990
HIT000665173 (
ENST00000551579
)
(Conserved hypothetical protein.)
genome : 15,690,624 - 15,693,012 (2,389)
query : 17 - 489 (473/489)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 7, cyto_nucl 6.33333, cyto 3.5,
cyto_pero 2.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222990)
HIX0222990
HIT000663221 (
ENST00000549337
)
(Conserved hypothetical protein.)
genome : 15,692,779 - 15,694,836 (2,058)
query : 1 - 568 (568/568)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.8333, extr 9, nucl 9, cyto 8.5,
cyto_pero 5.33333, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222990)
HIX0223379
HIT000662006 (
ENST00000547936
)
(OST-HTH/LOTUS domain containing protein.)
genome : 15,695,985 - 15,699,971 (3,987)
query : 1 - 574 (574/574)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 7.5, cyto_nucl 6, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223379)
HIX0223381
HIT000663587 (
ENST00000549756
)
(Non-protein coding transcript.)
genome : 15,702,331 - 15,704,420 (2,090)
query : 1 - 530 (530/530)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223381)
HIX0223107
HIT000666012 (
ENST00000552535
)
(OST-HTH/LOTUS domain containing protein.)
genome : 15,706,563 - 15,711,222 (4,660)
query : 1 - 562 (562/562)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.3333, extr 12, cyto 11.5, nucl 7,
cyto_pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223107)
HIX0223107
HIT000661070 (
ENST00000546864
)
(Nucleotide-binding alpha-beta plait domain containing protein.)
genome : 15,710,642 - 15,717,007 (6,366)
query : 1 - 1,101 (1,101/1,101)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 4.5, cyto_pero 4.33333,
cyto_nucl 3.66667, extr 2, pero 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223107)
HIX0223107
HIT000665257 (
ENST00000551678
)
(Nucleotide-binding alpha-beta plait domain containing protein.)
genome : 15,715,350 - 15,716,939 (1,590)
query : 1 - 568 (568/568)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 15.5, extr 7, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223107)
HIX0222955
HIT000261622
(
BC064914
)
Representative transcript
(Meiosis arrest female protein 1 family protein.)
genome : 15,718,738 - 15,737,023 (18,286)
query : 1 - 2,365 (2,365/2,379)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR021139 : NYN domain, limkain-b1-type
IPR024582 : Limkain b1, conserved domain
IPR024768 : Meiosis arrest female protein 1
IPR029060 : PIN domain-like
GO :
0005777 : Cellular Component : peroxisome
0010468 : Biological Process : regulation of gene expression
0048477 : Biological Process : oogenesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16.5, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222955)
HIX0222955
HIT000020695
(
AK095840
)
(Meiosis arrest female protein 1 family protein.)
genome : 15,718,741 - 15,737,016 (18,276)
query : 4 - 2,358 (2,355/2,358)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995;1.000)5'
coverage = 0.999
InterPro :
IPR021139 : NYN domain, limkain-b1-type
IPR024582 : Limkain b1, conserved domain
IPR024768 : Meiosis arrest female protein 1
IPR029060 : PIN domain-like
GO :
0005777 : Cellular Component : peroxisome
0010468 : Biological Process : regulation of gene expression
0048477 : Biological Process : oogenesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222955)
HIX0222955
HIT000058295
(
AB012134
)
(Meiosis arrest female protein 1 family protein.)
genome : 15,719,338 - 15,728,686 (9,349)
query : 1 - 911 (911/911)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR021139 : NYN domain, limkain-b1-type
IPR024582 : Limkain b1, conserved domain
IPR024768 : Meiosis arrest female protein 1
IPR029060 : PIN domain-like
GO :
0005777 : Cellular Component : peroxisome
0010468 : Biological Process : regulation of gene expression
0048477 : Biological Process : oogenesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto 10, nucl 7, mito 3.5, E.R._mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222955)
HIX0222955
HIT000662246 (
ENST00000548216
)
(Meiosis arrest female protein 1 family protein.)
genome : 15,724,091 - 15,736,999 (12,909)
query : 1 - 2,529 (2,529/2,529)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12.5, extr 11, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222955)
HIX0222955
HIT000435149
(
BC139919
)
(Meiosis arrest female protein 1 family protein.)
genome : 15,727,471 - 15,733,128 (5,658)
query : 1 - 1,997 (1,997/2,011)
3 exons
identity = 0.998
3'(1.000;0.998;1.000)5'
coverage = 1.000
InterPro :
IPR024768 : Meiosis arrest female protein 1
GO :
0005777 : Cellular Component : peroxisome
0010468 : Biological Process : regulation of gene expression
0048477 : Biological Process : oogenesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12.5, extr 11, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222955)
HIX0222955
HIT000435186
(
BC141831
)
(Meiosis arrest female protein 1 family protein.)
genome : 15,727,471 - 15,733,128 (5,658)
query : 1 - 1,997 (1,997/2,011)
3 exons
identity = 0.998
3'(1.000;0.998;1.000)5'
coverage = 1.000
InterPro :
IPR024768 : Meiosis arrest female protein 1
GO :
0005777 : Cellular Component : peroxisome
0010468 : Biological Process : regulation of gene expression
0048477 : Biological Process : oogenesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12.5, extr 11, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222955)
HIX0222955
HIT000497291
(
AK302667
)
(Meiosis arrest female protein 1 family protein.)
genome : 15,729,058 - 15,736,999 (7,942)
query : 1 - 1,469 (1,469/1,469)
3 exons
identity = 0.999
3'(0.999;0.995;1.000)5'
coverage = 1.000
InterPro :
IPR024768 : Meiosis arrest female protein 1
GO :
0005777 : Cellular Component : peroxisome
0010468 : Biological Process : regulation of gene expression
0048477 : Biological Process : oogenesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12.5, extr 11, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222955)
HIX0222955
HIT000663114 (
ENST00000549219
)
(Meiosis arrest female protein 1 family protein.)
genome : 15,729,851 - 15,736,345 (6,495)
query : 1 - 581 (581/581)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 12, extr 11, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222955)
HIX0012834
HIT000093266
(
BC033900
)
(Nuclear distribution protein nudE homolog 1.)
genome : 15,737,124 - 15,820,207 (83,084)
query : 6 - 3,939 (3,934/3,954)
10 exons
identity = 0.998
5'(1.000;0.992;1.000;1.000;1.000;1.000;0.989;
1.000;1.000;0.999)3'
coverage = 0.999
InterPro :
IPR006964 : NUDE protein, C-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14.5, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
HIX0012834
HIT000479704 (
ENST00000396355
)
(Nuclear distribution protein nudE homolog 1.)
genome : 15,737,124 - 15,820,210 (83,087)
query : 1 - 3,936 (3,936/3,936)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13.5, cyto 13.5, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
HIX0012834
HIT000560926 (
NM_001143979
)
(Nuclear distribution protein nudE homolog 1.)
genome : 15,737,124 - 15,820,210 (83,087)
query : 1 - 3,936 (3,936/3,936)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13.5, cyto 13.5, extr 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
HIX0012834
HIT000479702 (
ENST00000396353
)
(Nuclear distribution protein nudE homolog 1; NudE;)
genome : 15,737,124 - 15,793,679 (56,556)
query : 1 - 1,867 (1,867/1,867)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14, nucl 11.5, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
HIX0012834
HIT000347356 (
ENST00000365771
)
(Non-protein coding transcript.)
genome : 15,737,151 - 15,737,229 (79)
query : 1 - 79 (79/79)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
HIX0012834
HIT000658180 (
NR_030159
)
(Non-protein coding transcript.)
genome : 15,737,151 - 15,737,229 (79)
query : 1 - 79 (79/79)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
HIX0012834
HIT000206546 (
NM_017668
)
(Nuclear distribution protein nudE homolog 1.)
genome : 15,744,083 - 15,820,210 (76,128)
query : 1 - 3,222 (3,222/3,222)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13.5, cyto 13.5, extr 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
HIX0012834
HIT000479703 (
ENST00000396354
)
(Nuclear distribution protein nudE homolog 1.)
genome : 15,744,084 - 15,820,210 (76,127)
query : 1 - 3,221 (3,221/3,221)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13.5, cyto 13.5, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
HIX0012834
HIT000030399
(
BC001421
)
Representative transcript
(Nuclear distribution protein nudE homolog 1.)
genome : 15,744,090 - 15,818,992 (74,903)
query : 1 - 1,997 (1,997/2,014)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006964 : NUDE protein, C-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13.5, cyto 13.5, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB172487
Rattus
sp. (Rat) : AF240463
Gallus
sp. (Chicken) : AJ719455
Mus
sp. (Mouse) : AK037289
Danio
sp. (Zebrafish) : BC097169
Bos
sp. (Cow) : BC148068
Canis
sp. (Dog) : ENSCAFT00000029720
Oryzias
sp. (Medaka) : ENSORLT00000000974
Oryzias
sp. (Medaka) : ENSORLT00000016992
Pongo
sp. (Orangutan) : ENSPPYT00000008397
Tetraodon
sp. (Tetraodon) : GSTENT00007500001
Tetraodon
sp. (Tetraodon) : GSTENT00022706001
Takifugu
sp. (Fugu) : SINFRUT00000166315
Takifugu
sp. (Fugu) : SINFRUT00000172628
Monodelphis
sp. (Opossum) : XM_001374858
Equus
sp. (Horse) : XM_001916795
Pan
sp. (Chimpanzee) : XM_510841
HIX0012834
HIT000009089
(
AK025815
)
(Nuclear distribution protein nudE homolog 1.)
genome : 15,744,104 - 15,818,992 (74,889)
query : 1 - 1,983 (1,983/1,999)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006964 : NUDE protein, C-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13.5, cyto 13.5, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
HIX0012834
HIT000002583
(
AK000108
)
(Nuclear distribution protein nudE homolog 1.)
genome : 15,744,104 - 15,818,990 (74,887)
query : 1 - 1,981 (1,981/1,997)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13.5, cyto 13.5, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
HIX0012834
HIT000685320 (
ENST00000572756
)
(Nuclear distribution protein nudE homolog 1; NudE;)
genome : 15,744,104 - 15,785,181 (41,078)
query : 1 - 915 (915/915)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
HIX0012834
HIT000683574 (
ENST00000570727
)
(Nuclear distribution protein nudE homolog 1; NudE;)
genome : 15,744,104 - 15,771,801 (27,698)
query : 1 - 588 (588/588)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 7, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
HIX0012834
HIT000685709 (
ENST00000573203
)
(Nuclear distribution protein nudE homolog 1; NudE;)
genome : 15,744,114 - 15,785,076 (40,963)
query : 1 - 762 (762/762)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 13, nucl 12, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
HIX0012834
HIT000135303 (
ENST00000342673
)
(Nuclear distribution protein nudE homolog 1.)
genome : 15,758,584 - 15,820,210 (61,627)
query : 1 - 3,162 (3,162/3,162)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13.5, cyto 13.5, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
HIX0012834
HIT000070461
(
AF124431
)
(Nuclear distribution protein nudE homolog 1.)
genome : 15,758,632 - 15,790,785 (32,154)
query : 18 - 1,034 (1,017/1,052)
7 exons
identity = 0.989
5'(1.000;1.000;0.993;1.000;0.983;0.978;0.977)3'
coverage = 0.983
InterPro :
IPR006964 : NUDE protein, C-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
HIX0012834
HIT000686538 (
ENST00000574163
)
(Nuclear distribution protein nudE homolog 1; NudE;)
genome : 15,766,520 - 15,781,325 (14,806)
query : 1 - 352 (352/352)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
HIX0012834
HIT000689067 (
ENST00000577101
)
(Nuclear distribution protein nudE homolog 1; NudE;)
genome : 15,771,782 - 15,790,623 (18,842)
query : 1 - 575 (575/575)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12.5, nucl 10.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
HIX0223960
HIT000688516 (
ENST00000576454
)
(Conserved hypothetical protein.)
genome : 15,777,147 - 15,778,427 (1,281)
query : 1 - 503 (503/503)
2 exons
identity = 0.994
3'(0.981;0.997)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, extr_plas 14.5, plas 8, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223960)
HIX0012834
HIT000047800
(
AK127927
)
(Nuclear distribution protein nudE homolog 1; NudE;)
genome : 15,780,224 - 15,789,483 (9,260)
query : 1 - 2,308 (2,308/2,332)
5 exons
identity = 0.992
5'(0.988;0.995;1.000;0.991;0.986)3'
coverage = 1.000
InterPro :
IPR006964 : NUDE protein, C-terminal
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 10, mito 10, mito_nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
HIX0012834
HIT000686490 (
ENST00000574109
)
(Nuclear distribution protein nudE homolog 1; NudE;)
genome : 15,781,284 - 15,793,787 (12,504)
query : 1 - 843 (843/843)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13.5, cyto 10.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
HIX0012834
HIT000686129 (
ENST00000573694
)
(Nuclear distribution protein nudE homolog 1; NudE;)
genome : 15,785,020 - 15,818,079 (33,060)
query : 1 - 411 (411/411)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 5, plas 1, extr 1, mito 1, golg 1,
extr_plas 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
HIX0012834
HIT000688556 (
ENST00000576502
)
(Nuclear distribution protein nudE homolog 1; NudE;)
genome : 15,785,057 - 15,794,348 (9,292)
query : 1 - 1,131 (1,131/1,131)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 13, extr 9, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
HIX0012834
HIT000685504 (
ENST00000572967
)
(Nuclear distribution protein nudE homolog 1; NudE;)
genome : 15,785,099 - 15,818,079 (32,981)
query : 1 - 484 (484/484)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, nucl 7.5, cyto_nucl 7, cyto 3.5, extr 2,
pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
HIX0012834
HIT000043120
(
AK123247
)
(Conserved hypothetical protein.)
genome : 15,793,016 - 15,795,769 (2,754)
query : 1 - 2,329 (2,329/2,329)
2 exons
identity = 0.995
5'(0.997;0.991)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, mito 7.5, E.R. 6, mito_pero 6, cyto 4, nucl 3,
E.R._golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
HIX0222939
HIT000265814
(
BC080545
)
(Myosin tail domain containing protein.)
genome : 15,796,995 - 15,815,436 (18,442)
query : 1 - 2,352 (2,352/2,369)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002928 : Myosin tail
GO :
0003774 : Molecular Function : motor activity
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 17, nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222939)
HIX0222939
HIT000323043
(
X69292
)
(Myosin-11; Myosin heavy chain 11; Myosin heavy chain, smooth muscle isoform; SMMHC;)
genome : 15,797,174 - 15,829,444 (32,271)
query : 12 - 3,320 (3,309/3,320)
16 exons
identity = 0.996
3'(0.994;1.000;1.000;0.981;1.000;1.000;1.000;
1.000;1.000;1.000;0.996;1.000;1.000;1.000;
1.000;0.991)5'
coverage = 0.997
InterPro :
IPR002928 : Myosin tail
GO :
0003774 : Molecular Function : motor activity
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 14.6667, cyto 7.5,
cyto_golg 5.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222939)
HIX0222939
HIT000062260
(
AF013570
)
(Myosin tail domain containing protein.)
genome : 15,797,174 - 15,818,570 (21,397)
query : 1 - 2,580 (2,580/2,580)
13 exons
identity = 0.997
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.988;1.000;1.000;1.000;0.985)5'
coverage = 1.000
InterPro :
IPR002928 : Myosin tail
GO :
0003774 : Molecular Function : motor activity
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14, cyto_pero 11.5,
cyto_golg 11.1667, nucl 7, pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222939)
HIX0222939
HIT000062504
(
AF020091
)
(Myosin tail domain containing protein.)
genome : 15,797,174 - 15,818,570 (21,397)
query : 1 - 2,541 (2,541/2,541)
12 exons
identity = 0.997
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
0.988;1.000;1.000;1.000;0.985)5'
coverage = 1.000
InterPro :
IPR002928 : Myosin tail
GO :
0003774 : Molecular Function : motor activity
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14, cyto_pero 11.5,
cyto_golg 11.1667, nucl 7, pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222939)
HIX0222939
HIT000686312 (
ENST00000573908
)
(Conserved hypothetical protein.)
genome : 15,797,598 - 15,805,127 (7,530)
query : 1 - 541 (541/541)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 3, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222939)
HIX0222939
HIT000100436
(
D10667
)
Representative transcript
(Myosin-11; Myosin heavy chain 11; Myosin heavy chain, smooth muscle isoform; SMMHC;)
genome : 15,797,762 - 15,835,513 (37,752)
query : 8 - 3,385 (3,378/3,388)
21 exons
identity = 0.997
3'(0.986;1.000;0.994;0.991;1.000;1.000;1.000;
1.000;0.988;0.995;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR002928 : Myosin tail
GO :
0003774 : Molecular Function : motor activity
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 16, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222939)
HIX0222939
HIT000055628
(
BX641087
)
(Myosin tail domain containing protein.)
genome : 15,797,803 - 15,833,941 (36,139)
query : 1 - 1,535 (1,535/1,548)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.971)5'
coverage = 1.000
InterPro :
IPR002928 : Myosin tail
GO :
0003774 : Molecular Function : motor activity
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222939)
HIX0222939
HIT000216185
(
S67238
)
(Myosin tail domain containing protein.)
genome : 15,797,805 - 15,814,034 (16,230)
query : 1 - 1,075 (1,075/1,078)
9 exons
identity = 0.995
3'(1.000;1.000;0.983;1.000;0.990;1.000;1.000;
1.000;1.000)5'
coverage = 0.997
InterPro :
IPR002928 : Myosin tail
GO :
0003774 : Molecular Function : motor activity
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, nucl 10, cyto_mito 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222939)
HIX0222939
HIT000216186
(
S67240
)
(Myosin tail domain containing protein.)
genome : 15,797,805 - 15,814,034 (16,230)
query : 1 - 1,036 (1,036/1,039)
8 exons
identity = 0.994
3'(0.994;0.983;1.000;0.990;1.000;1.000;1.000;
1.000)5'
coverage = 0.997
InterPro :
IPR002928 : Myosin tail
GO :
0003774 : Molecular Function : motor activity
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 10, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222939)
HIX0027083
HIT000050061
(
AK130790
)
Representative transcript
(Conserved hypothetical protein.)
genome : 15,798,267 - 15,799,841 (1,575)
query : 1 - 1,575 (1,575/1,575)
1 exon
identity = 0.990
5'(0.990)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 12, extr 10, cyto 5, extr_plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027083)
HIX0222939
HIT000306534
(
CR749516
)
(Myosin tail domain containing protein.)
genome : 15,806,752 - 15,818,185 (11,434)
query : 1 - 5,720 (5,720/5,770)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002928 : Myosin tail
GO :
0003774 : Molecular Function : motor activity
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222939)
HIX0222939
HIT000688257 (
ENST00000576164
)
(Myosin tail domain containing protein.)
genome : 15,806,747 - 15,818,185 (11,439)
query : 1 - 5,725 (5,725/5,725)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222939)
HIX0222939
HIT000429946
(
AK311080
)
(Myosin-11 isoform SM2A.)
genome : 15,806,753 - 15,818,995 (12,243)
query : 1 - 4,087 (4,087/4,087)
12 exons
identity = 0.998
3'(0.998;1.000;0.990;1.000;1.000;0.992;1.000;
1.000;1.000;0.996;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002928 : Myosin tail
GO :
0003774 : Molecular Function : motor activity
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 16.5, nucl 10, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222939)
HIX0222939
HIT000684047 (
ENST00000571275
)
(Myosin tail domain containing protein.)
genome : 15,806,753 - 15,818,995 (12,243)
query : 1 - 4,087 (4,087/4,087)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 16.5, nucl 10, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222939)
HIX0012834
HIT000685109 (
ENST00000572503
)
(Non-protein coding transcript.)
genome : 15,815,350 - 15,818,148 (2,799)
query : 1 - 285 (285/285)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
HIX0222939
HIT000016053
(
AK091186
)
(Conserved hypothetical protein.)
genome : 15,815,494 - 15,818,991 (3,498)
query : 1 - 3,498 (3,498/3,498)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 12.5, mito 5, extr 4, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222939)
HIX0222939
HIT000684584 (
ENST00000571896
)
(Conserved hypothetical protein.)
genome : 15,815,494 - 15,818,991 (3,498)
query : 1 - 3,498 (3,498/3,498)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 12.5, mito 5, extr 4, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222939)
HIX0222939
HIT000017864
(
AK092997
)
(Conserved hypothetical protein.)
genome : 15,816,949 - 15,818,991 (2,043)
query : 1 - 2,043 (2,043/2,043)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 12.5, mito 5, extr 4, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222939)
HIX0012834
HIT000461149
(
DQ594618
)
(Non-protein coding transcript.)
genome : 15,819,879 - 15,819,908 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012834)
HIX0223933
HIT000686581 (
ENST00000574212
)
(Conserved hypothetical protein.)
genome : 15,820,531 - 15,826,850 (6,320)
query : 1 - 836 (836/836)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223933)
HIX0134983
HIT000458617
(
DQ592086
)
Representative transcript
(Non-protein coding transcript.)
genome : 15,829,690 - 15,829,720 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0134983)
HIX0223970
HIT000689019 (
ENST00000577048
)
(Conserved hypothetical protein.)
genome : 15,835,008 - 15,835,648 (641)
query : 1 - 550 (550/550)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 12, cyto_nucl 9.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223970)
HIX0222939
HIT000686497 (
ENST00000574119
)
(Conserved hypothetical protein.)
genome : 15,835,410 - 15,836,048 (639)
query : 1 - 549 (549/549)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222939)
HIX0223298
HIT000021891
(
AK097036
)
Representative transcript
(Conserved hypothetical protein.)
genome : 15,839,462 - 15,841,430 (1,969)
query : 1 - 1,969 (1,969/1,969)
1 exon
identity = 0.990
3'(0.990)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 8.83333, cyto 8, nucl 6.5,
cyto_pero 5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223298)
HIX0222991
HIT000044906
(
AK125033
)
Representative transcript
(Myosin head, motor domain containing protein.)
genome : 15,843,025 - 15,877,389 (34,365)
query : 1 - 3,450 (3,450/3,450)
11 exons
identity = 0.999
3'(0.998;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR001609 : Myosin head, motor domain
GO :
0003774 : Molecular Function : motor activity
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222991)
HIX0222991
HIT000683626 (
ENST00000570785
)
(Myosin head, motor domain containing protein.)
genome : 15,843,025 - 15,877,389 (34,365)
query : 1 - 3,450 (3,450/3,450)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222991)
HIX0222991
HIT000684596 (
ENST00000571910
)
(Myosin head, motor domain containing protein.)
genome : 15,869,699 - 15,873,280 (3,582)
query : 1 - 979 (979/979)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_plas 12, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222991)
HIX0223025
HIT000092282
(
BC031040
)
Representative transcript
(Myosin, N-terminal, SH3-like domain containing protein.)
genome : 15,878,886 - 15,950,885 (72,000)
query : 1 - 2,339 (2,339/2,353)
5 exons
identity = 0.997
3'(0.998;1.000;0.994;0.997;1.000)5'
coverage = 1.000
InterPro :
IPR001609 : Myosin head, motor domain
IPR004009 : Myosin, N-terminal, SH3-like
IPR008989 : Myosin S1 fragment, N-terminal
GO :
0003774 : Molecular Function : motor activity
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
0051015 : Molecular Function : actin filament binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13.5, nucl 7, mito 4, extr 2,
E.R._mito 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223025)
HIX0223025
HIT000684244 (
ENST00000571505
)
(Myosin, N-terminal, SH3-like domain containing protein.)
genome : 15,878,886 - 15,950,885 (72,000)
query : 1 - 2,339 (2,339/2,353)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13.5, nucl 7, mito 4, extr 2,
E.R._mito 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223025)
HIX0027076
HIT000049684
(
AK130413
)
Representative transcript
(Conserved hypothetical protein.)
genome : 15,884,832 - 15,886,574 (1,743)
query : 1 - 1,743 (1,743/1,743)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027076)
HIX0202265
HIT000027410
(
AL832498
)
Representative transcript
(LisH domain-containing protein FOPNL; FGFR1OP N-terminal-like protein; FOP-related protein of 20 kDa;)
genome : 15,959,576 - 15,982,468 (22,893)
query : 2 - 2,274 (2,273/2,350)
5 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006594 : LIS1 homology motif
IPR018993 : FGFR1 oncogene partner (FOP), N-terminal dimerisation domain
GO :
0005515 : Molecular Function : protein binding
0005815 : Cellular Component : microtubule organizing center
0034453 : Biological Process : microtubule anchoring
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 12.5, nucl 11.5, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202265)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720610
Mus
sp. (Mouse) : AK146884
Rattus
sp. (Rat) : BC098924
Bos
sp. (Cow) : BC148048
Tetraodon
sp. (Tetraodon) : CR734118
Pongo
sp. (Orangutan) : CR858621
Canis
sp. (Dog) : ENSCAFT00000028950
Equus
sp. (Horse) : ENSECAT00000017869
Oryzias
sp. (Medaka) : ENSORLT00000016850
Takifugu
sp. (Fugu) : SINFRUT00000151150
Macaca
sp. (Macaque) : XM_001109724
Pan
sp. (Chimpanzee) : XM_001167510
Monodelphis
sp. (Opossum) : XM_001374840
Danio
sp. (Zebrafish) : XM_691258
HIX0202265
HIT000255049
(
AY507846
)
(LisH domain-containing protein FOPNL; FGFR1OP N-terminal-like protein; FOP-related protein of 20 kDa;)
genome : 15,959,576 - 15,982,462 (22,887)
query : 1 - 2,271 (2,271/2,288)
5 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006594 : LIS1 homology motif
IPR018993 : FGFR1 oncogene partner (FOP), N-terminal dimerisation domain
GO :
0005515 : Molecular Function : protein binding
0005815 : Cellular Component : microtubule organizing center
0034453 : Biological Process : microtubule anchoring
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 12.5, nucl 11.5, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202265)
HIX0202265
HIT000106855 (
ENST00000255759
)
(LisH domain-containing protein FOPNL; FGFR1OP N-terminal-like protein; FOP-related protein of 20 kDa;)
genome : 15,959,577 - 15,982,472 (22,896)
query : 1 - 2,275 (2,275/2,275)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 12.5, nucl 11.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202265)
HIX0202265
HIT000012329
(
AK055715
)
(LisH domain-containing protein FOPNL; FGFR1OP N-terminal-like protein; FOP-related protein of 20 kDa;)
genome : 15,959,577 - 15,982,447 (22,871)
query : 3 - 2,252 (2,250/2,252)
5 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR006594 : LIS1 homology motif
IPR018993 : FGFR1 oncogene partner (FOP), N-terminal dimerisation domain
GO :
0005515 : Molecular Function : protein binding
0005815 : Cellular Component : microtubule organizing center
0034453 : Biological Process : microtubule anchoring
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 12.5, nucl 11.5, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202265)
HIX0202265
HIT000212838 (
NM_144600
)
(LisH domain-containing protein FOPNL; FGFR1OP N-terminal-like protein; FOP-related protein of 20 kDa;)
genome : 15,959,577 - 15,982,447 (22,871)
query : 1 - 2,250 (2,250/2,250)
5 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 12.5, nucl 11.5, mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202265)
HIX0202265
HIT000013412
(
AK056798
)
(LisH domain-containing protein FOPNL; FGFR1OP N-terminal-like protein; FOP-related protein of 20 kDa;)
genome : 15,959,578 - 15,982,459 (22,882)
query : 1 - 2,039 (2,039/2,039)
3 exons
identity = 1.000
3'(0.999;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006594 : LIS1 homology motif
IPR018993 : FGFR1 oncogene partner (FOP), N-terminal dimerisation domain
GO :
0005515 : Molecular Function : protein binding
0005815 : Cellular Component : microtubule organizing center
0034453 : Biological Process : microtubule anchoring
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202265)
HIX0202265
HIT000686366 (
ENST00000573968
)
(LisH domain-containing protein FOPNL; FGFR1OP N-terminal-like protein; FOP-related protein of 20 kDa;)
genome : 15,959,578 - 15,982,459 (22,882)
query : 1 - 2,039 (2,039/2,039)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202265)
HIX0202265
HIT000039469
(
BC022321
)
(LisH domain-containing protein FOPNL; FGFR1OP N-terminal-like protein; FOP-related protein of 20 kDa;)
genome : 15,960,333 - 15,982,457 (22,125)
query : 1 - 1,504 (1,504/1,534)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR006594 : LIS1 homology motif
IPR018993 : FGFR1 oncogene partner (FOP), N-terminal dimerisation domain
GO :
0005515 : Molecular Function : protein binding
0005815 : Cellular Component : microtubule organizing center
0034453 : Biological Process : microtubule anchoring
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 12.5, nucl 11.5, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202265)
HIX0202265
HIT000685611 (
ENST00000573087
)
(LisH domain-containing protein FOPNL; FGFR1OP N-terminal-like protein; FOP-related protein of 20 kDa;)
genome : 15,960,926 - 15,982,482 (21,557)
query : 1 - 851 (851/851)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, nucl 4, mito 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202265)
HIX0202265
HIT000685873 (
ENST00000573396
)
(LisH domain-containing protein FOPNL; FGFR1OP N-terminal-like protein; FOP-related protein of 20 kDa;)
genome : 15,961,036 - 15,982,456 (21,421)
query : 1 - 735 (735/735)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 5, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202265)
HIX0202265
HIT000687894 (
ENST00000575744
)
(LisH domain-containing protein FOPNL; FGFR1OP N-terminal-like protein; FOP-related protein of 20 kDa;)
genome : 15,961,077 - 15,982,460 (21,384)
query : 1 - 565 (565/565)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 7, plas 2, extr 2, cysk 2, extr_plas 2,
cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202265)
HIX0202265
HIT000685038 (
ENST00000572415
)
(LisH domain-containing protein FOPNL; FGFR1OP N-terminal-like protein; FOP-related protein of 20 kDa;)
genome : 15,961,164 - 15,982,480 (21,317)
query : 1 - 796 (796/796)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 9, cyto_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202265)
HIX0202265
HIT000687322 (
ENST00000575073
)
(LisH domain-containing protein FOPNL; FGFR1OP N-terminal-like protein; FOP-related protein of 20 kDa;)
genome : 15,961,195 - 15,982,482 (21,288)
query : 1 - 530 (530/530)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202265)
HIX0202265
HIT000685903 (
ENST00000573429
)
(LisH domain-containing protein FOPNL; FGFR1OP N-terminal-like protein; FOP-related protein of 20 kDa;)
genome : 15,961,277 - 15,982,471 (21,195)
query : 1 - 646 (646/646)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14, nucl 6.5, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202265)
HIX0202265
HIT000688063 (
ENST00000575938
)
(LisH domain-containing protein FOPNL; FGFR1OP N-terminal-like protein; FOP-related protein of 20 kDa;)
genome : 15,967,342 - 15,982,450 (15,109)
query : 1 - 381 (381/381)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 5, nucl 5, plas 2, mito 2, cysk 2,
cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202265)
HIX0223928
HIT000686267 (
ENST00000573856
)
(Hypothetical short protein.)
genome : 15,978,886 - 15,980,015 (1,130)
query : 1 - 536 (536/536)
2 exons
identity = 0.994
5'(1.000;0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223928)
HIX0212171
HIT000586820 (
ENST00000482912
)
(Ribosomal protein L15e family protein.)
genome : 16,025,554 - 16,026,151 (598)
query : 1 - 598 (598/598)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 4, mito 4, cyto_mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212171)
HIX0012837
HIT000191684
(
L05628
)
(Multidrug resistance-associated protein 1; ATP-binding cassette sub-family C member 1; Leukotriene C(4) transporter; LTC4 transporter;)
genome : 16,043,445 - 16,235,357 (191,913)
query : 34 - 5,011 (4,978/5,011)
31 exons
identity = 0.998
5'(0.958;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.993
InterPro :
IPR003439 : ABC transporter-like
IPR003593 : AAA+ ATPase domain
IPR005292 : Multi drug resistance-associated protein
IPR011527 : ABC transporter type 1, transmembrane domain
IPR017871 : ABC transporter, conserved site
GO :
0000166 : Molecular Function : nucleotide binding
0005215 : Molecular Function : transporter activity
0005524 : Molecular Function : ATP binding
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
0016887 : Molecular Function : ATPase activity
0017111 : Molecular Function : nucleoside-triphosphatase activity
0042626 : Molecular Function : ATPase activity, coupled to transmembrane movement of substances
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012837)
HIX0012837
HIT000201714 (
NM_004996
)
(Multidrug resistance-associated protein 1; ATP-binding cassette sub-family C member 1; Leukotriene C(4) transporter; LTC4 transporter;)
genome : 16,043,434 - 16,236,931 (193,498)
query : 1 - 6,564 (6,564/6,564)
31 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012837)
HIX0012837
HIT000307109 (
ENST00000345148
)
(Multidrug resistance-associated protein 1; ATP-binding cassette sub-family C member 1; Leukotriene C(4) transporter; LTC4 transporter;)
genome : 16,043,434 - 16,236,931 (193,498)
query : 1 - 6,369 (6,369/6,369)
30 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012837)
HIX0012837
HIT000307292 (
ENST00000346370
)
(Multidrug resistance-associated protein 1; ATP-binding cassette sub-family C member 1; Leukotriene C(4) transporter; LTC4 transporter;)
genome : 16,043,434 - 16,236,931 (193,498)
query : 1 - 6,396 (6,396/6,396)
30 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012837)
HIX0012837
HIT000307723 (
ENST00000349029
)
(Multidrug resistance-associated protein 1; ATP-binding cassette sub-family C member 1; Leukotriene C(4) transporter; LTC4 transporter;)
genome : 16,043,434 - 16,236,931 (193,498)
query : 1 - 6,219 (6,219/6,219)
29 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012837)
HIX0012837
HIT000308048 (
ENST00000351154
)
(Multidrug resistance-associated protein 1; ATP-binding cassette sub-family C member 1; Leukotriene C(4) transporter; LTC4 transporter;)
genome : 16,043,434 - 16,236,931 (193,498)
query : 1 - 6,387 (6,387/6,387)
30 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012837)
HIX0012837
HIT000482481 (
ENST00000399408
)
(Multidrug resistance-associated protein 1; ATP-binding cassette sub-family C member 1; Leukotriene C(4) transporter; LTC4 transporter;)
genome : 16,043,434 - 16,236,931 (193,498)
query : 1 - 6,594 (6,594/6,594)
32 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012837)
HIX0012837
HIT000482483 (
ENST00000399410
)
(Multidrug resistance-associated protein 1; ATP-binding cassette sub-family C member 1; Leukotriene C(4) transporter; LTC4 transporter;)
genome : 16,043,434 - 16,236,919 (193,486)
query : 1 - 6,552 (6,552/6,552)
31 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012837)
HIX0012837
HIT000323664
(
X78338
)
Representative transcript
(Multidrug resistance-associated protein 1; ATP-binding cassette sub-family C member 1; Leukotriene C(4) transporter; LTC4 transporter;)
genome : 16,043,472 - 16,236,273 (192,802)
query : 1 - 5,867 (5,867/5,867)
31 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.986;1.000;
1.000;1.000;0.994)3'
coverage = 1.000
InterPro :
IPR003439 : ABC transporter-like
IPR003593 : AAA+ ATPase domain
IPR005292 : Multi drug resistance-associated protein
IPR011527 : ABC transporter type 1, transmembrane domain
IPR017871 : ABC transporter, conserved site
GO :
0000166 : Molecular Function : nucleotide binding
0005215 : Molecular Function : transporter activity
0005524 : Molecular Function : ATP binding
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
0016887 : Molecular Function : ATPase activity
0017111 : Molecular Function : nucleoside-triphosphatase activity
0042626 : Molecular Function : ATPase activity, coupled to transmembrane movement of substances
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012837)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : AB082124
Rattus
sp. (Rat) : AF487549
Gallus
sp. (Chicken) : AJ851786
Mus
sp. (Mouse) : AK029876
Macaca
sp. (Macaque) : AY146672
Canis
sp. (Dog) : AY363728
Equus
sp. (Horse) : DQ418453
Monodelphis
sp. (Opossum) : ENSMODT00000037298
Oryzias
sp. (Medaka) : ENSORLT00000016844
Oryzias
sp. (Medaka) : ENSORLT00000021452
Pongo
sp. (Orangutan) : ENSPPYT00000008400
Pan
sp. (Chimpanzee) : ENSPTRT00000014388
Tetraodon
sp. (Tetraodon) : GSTENT00008809001
Takifugu
sp. (Fugu) : SINFRUT00000146447
Danio
sp. (Zebrafish) : XM_001341859
HIX0012837
HIT000306763
(
CR749835
)
(Canalicular multispecific organic anion transporter 2; ATP-binding cassette sub-family C member 3; Multi-specific organic anion transporter D; MOAT-D; Multidrug resistance-associated protein 3;)
genome : 16,101,718 - 16,236,934 (135,217)
query : 1 - 5,879 (5,879/5,899)
28 exons
identity = 0.996
5'(1.000;1.000;0.953;0.991;0.994;1.000;1.000;
1.000;0.986;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000;0.993;1.000;0.997;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.995)3'
coverage = 0.999
InterPro :
IPR003439 : ABC transporter-like
IPR003593 : AAA+ ATPase domain
IPR005292 : Multi drug resistance-associated protein
IPR011527 : ABC transporter type 1, transmembrane domain
IPR017871 : ABC transporter, conserved site
GO :
0000166 : Molecular Function : nucleotide binding
0005215 : Molecular Function : transporter activity
0005524 : Molecular Function : ATP binding
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
0016887 : Molecular Function : ATPase activity
0017111 : Molecular Function : nucleoside-triphosphatase activity
0042626 : Molecular Function : ATPase activity, coupled to transmembrane movement of substances
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012837)
HIX0012837
HIT000329055
(
AB209120
)
(Multidrug resistance-associated protein 1; ATP-binding cassette sub-family C member 1; Leukotriene C(4) transporter; LTC4 transporter;)
genome : 16,103,713 - 16,235,382 (131,670)
query : 1 - 4,565 (4,565/4,565)
30 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003439 : ABC transporter-like
IPR003593 : AAA+ ATPase domain
IPR005292 : Multi drug resistance-associated protein
IPR011527 : ABC transporter type 1, transmembrane domain
IPR017871 : ABC transporter, conserved site
GO :
0000166 : Molecular Function : nucleotide binding
0005215 : Molecular Function : transporter activity
0005524 : Molecular Function : ATP binding
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
0016887 : Molecular Function : ATPase activity
0017111 : Molecular Function : nucleoside-triphosphatase activity
0042626 : Molecular Function : ATPase activity, coupled to transmembrane movement of substances
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012837)
HIX0012837
HIT000685431 (
ENST00000572882
)
(Multidrug resistance-associated protein 1; ATP-binding cassette sub-family C member 1; Leukotriene C(4) transporter; LTC4 transporter;)
genome : 16,103,713 - 16,235,382 (131,670)
query : 1 - 4,565 (4,565/4,565)
30 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012837)
HIX0012837
HIT000429881
(
AK311015
)
(Multidrug resistance-associated protein 1; ATP-binding cassette sub-family C member 1; Leukotriene C(4) transporter; LTC4 transporter;)
genome : 16,108,397 - 16,150,418 (42,022)
query : 1 - 1,543 (1,543/1,543)
9 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;0.996;1.000;0.994;
0.989;0.998)3'
coverage = 1.000
InterPro :
IPR011527 : ABC transporter type 1, transmembrane domain
GO :
0005524 : Molecular Function : ATP binding
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
0042626 : Molecular Function : ATPase activity, coupled to transmembrane movement of substances
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012837)
HIX0012837
HIT000686593 (
ENST00000574224
)
(Multidrug resistance-associated protein 1; ATP-binding cassette sub-family C member 1; Leukotriene C(4) transporter; LTC4 transporter;)
genome : 16,108,397 - 16,150,418 (42,022)
query : 1 - 1,543 (1,543/1,543)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, extr 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012837)
HIX0012837
HIT000715311
(
HQ917065
)
(Multidrug resistance-associated protein 1; ATP-binding cassette sub-family C member 1; Leukotriene C(4) transporter; LTC4 transporter;)
genome : 16,146,626 - 16,170,252 (23,627)
query : 1 - 322 (322/322)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011527 : ABC transporter type 1, transmembrane domain
GO :
0005524 : Molecular Function : ATP binding
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
0042626 : Molecular Function : ATPase activity, coupled to transmembrane movement of substances
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, mito 7, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012837)
HIX0012837
HIT000715310
(
HQ917064
)
(Multidrug resistance-associated protein 1; ATP-binding cassette sub-family C member 1; Leukotriene C(4) transporter; LTC4 transporter;)
genome : 16,149,949 - 16,170,252 (20,304)
query : 1 - 362 (362/362)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011527 : ABC transporter type 1, transmembrane domain
GO :
0005524 : Molecular Function : ATP binding
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
0042626 : Molecular Function : ATPase activity, coupled to transmembrane movement of substances
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 26, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012837)
HIX0134370
HIT000022725
(
AK097871
)
Representative transcript
(Activating molecule in BECN1-regulated autophagy protein 1 isoform 1.)
genome : 16,160,793 - 16,162,850 (2,058)
query : 1 - 2,058 (2,058/2,058)
1 exon
identity = 0.989
3'(0.989)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 9, cyto_nucl 9, extr_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0134370)
HIX0012837
HIT000687629 (
ENST00000575422
)
(Multidrug resistance-associated protein 1; ATP-binding cassette sub-family C member 1; Leukotriene C(4) transporter; LTC4 transporter;)
genome : 16,170,031 - 16,205,318 (35,288)
query : 1 - 1,198 (1,198/1,198)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 15.5, cyto_mito 8.5, plas 4.5, pero 4,
extr_plas 4, nucl 3, extr 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012837)
HIX0223367
HIT000483694_04 (
ENST00000400791
)
(Hypothetical protein.)
genome : 16,188,049 - 16,189,066 (1,018)
query : 1 - 413 (413/413)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 9, cyto_nucl 5.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223367)
HIX0012837
HIT000688601 (
ENST00000576557
)
(Multidrug resistance-associated protein 1; ATP-binding cassette sub-family C member 1; Leukotriene C(4) transporter; LTC4 transporter;)
genome : 16,191,849 - 16,200,725 (8,877)
query : 1 - 542 (542/542)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 12, cyto 9, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012837)
HIX0012837
HIT000684722 (
ENST00000572053
)
(Multidrug resistance-associated protein 1; ATP-binding cassette sub-family C member 1; Leukotriene C(4) transporter; LTC4 transporter;)
genome : 16,196,540 - 16,208,926 (12,387)
query : 1 - 744 (744/744)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012837)
HIX0012837
HIT000687052 (
ENST00000574761
)
(Multidrug resistance-associated protein 1; ATP-binding cassette sub-family C member 1; Leukotriene C(4) transporter; LTC4 transporter;)
genome : 16,200,383 - 16,215,960 (15,578)
query : 1 - 996 (996/996)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30.5, extr_plas 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012837)
HIX0012837
HIT000715312
(
HQ917066
)
(Multidrug resistance-associated protein 1; ATP-binding cassette sub-family C member 1; Leukotriene C(4) transporter; LTC4 transporter;)
genome : 16,208,879 - 16,225,731 (16,853)
query : 1 - 341 (341/341)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011527 : ABC transporter type 1, transmembrane domain
GO :
0005524 : Molecular Function : ATP binding
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
0042626 : Molecular Function : ATPase activity, coupled to transmembrane movement of substances
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, mito 8, plas 5, pero 4, cyto_mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012837)
HIX0012837
HIT000715313
(
HQ917067
)
(Multidrug resistance-associated protein 1; ATP-binding cassette sub-family C member 1; Leukotriene C(4) transporter; LTC4 transporter;)
genome : 16,208,879 - 16,225,721 (16,843)
query : 1 - 433 (433/433)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011527 : ABC transporter type 1, transmembrane domain
GO :
0005524 : Molecular Function : ATP binding
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
0042626 : Molecular Function : ATPase activity, coupled to transmembrane movement of substances
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, mito 9, pero 4, plas 3, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012837)
HIX0012837
HIT000057513
(
BX648866
)
(Multidrug resistance-associated protein 1; ATP-binding cassette sub-family C member 1; Leukotriene C(4) transporter; LTC4 transporter;)
genome : 16,215,809 - 16,236,910 (21,102)
query : 33 - 3,034 (3,002/3,056)
8 exons
identity = 0.995
5'(0.964;0.992;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 0.988
InterPro :
IPR003439 : ABC transporter-like
IPR003593 : AAA+ ATPase domain
IPR011527 : ABC transporter type 1, transmembrane domain
IPR017871 : ABC transporter, conserved site
GO :
0000166 : Molecular Function : nucleotide binding
0005524 : Molecular Function : ATP binding
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
0016887 : Molecular Function : ATPase activity
0017111 : Molecular Function : nucleoside-triphosphatase activity
0042626 : Molecular Function : ATPase activity, coupled to transmembrane movement of substances
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012837)
HIX0012837
HIT000086063
(
BC001636
)
(Multidrug resistance-associated protein 1; ATP-binding cassette sub-family C member 1; Leukotriene C(4) transporter; LTC4 transporter;)
genome : 16,218,700 - 16,236,274 (17,575)
query : 1 - 2,088 (2,088/2,106)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR003439 : ABC transporter-like
IPR003593 : AAA+ ATPase domain
IPR011527 : ABC transporter type 1, transmembrane domain
IPR017871 : ABC transporter, conserved site
GO :
0000166 : Molecular Function : nucleotide binding
0005524 : Molecular Function : ATP binding
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
0016887 : Molecular Function : ATPase activity
0017111 : Molecular Function : nucleoside-triphosphatase activity
0042626 : Molecular Function : ATPase activity, coupled to transmembrane movement of substances
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28.5, mito_pero 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012837)
HIX0012837
HIT000244005
(
AJ003198
)
(Hypothetical short protein.)
genome : 16,235,234 - 16,236,919 (1,686)
query : 1 - 1,678 (1,678/1,718)
1 exon
identity = 0.992
5'(0.992)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012837)
HIX0223044
HIT000688292 (
ENST00000576204
)
(ABC transporter-like domain containing protein.)
genome : 16,243,451 - 16,249,633 (6,183)
query : 1 - 1,914 (1,914/1,914)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 18, nucl 7.5, extr 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223044)
HIX0223044
HIT000324930
(
X95715
)
Representative transcript
(ABC transporter-like domain containing protein.)
genome : 16,243,551 - 16,259,800 (16,250)
query : 152 - 1,914 (1,763/1,936)
8 exons
identity = 0.989
3'(0.987;0.995;0.994;0.987;0.993;1.000;1.000;
0.978)5'
coverage = 0.921
InterPro :
IPR003439 : ABC transporter-like
IPR003593 : AAA+ ATPase domain
IPR011527 : ABC transporter type 1, transmembrane domain
IPR017871 : ABC transporter, conserved site
GO :
0000166 : Molecular Function : nucleotide binding
0005524 : Molecular Function : ATP binding
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
0016887 : Molecular Function : ATPase activity
0017111 : Molecular Function : nucleoside-triphosphatase activity
0042626 : Molecular Function : ATPase activity, coupled to transmembrane movement of substances
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, lyso 9, golg 5, E.R. 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223044)
HIX0223963
HIT000688705 (
ENST00000576683
)
(Conserved hypothetical protein.)
genome : 16,266,939 - 16,271,378 (4,440)
query : 1 - 476 (476/476)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 13.5, cyto 12.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223963)
HIX0223003
HIT000686476 (
ENST00000574094
)
(Multidrug resistance-associated protein 6; ATP-binding cassette sub-family C member 6; Anthracycline resistance-associated protein; Multi-specific organic anion transporter E; MOAT-E;)
genome : 16,275,562 - 16,317,351 (41,790)
query : 1 - 2,260 (2,260/2,260)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223003)
HIX0223003
HIT000492919
(
AK298295
)
(Multidrug resistance-associated protein 6; ATP-binding cassette sub-family C member 6; Anthracycline resistance-associated protein; Multi-specific organic anion transporter E; MOAT-E;)
genome : 16,277,816 - 16,317,351 (39,536)
query : 1 - 2,272 (2,272/2,272)
16 exons
identity = 0.996
3'(1.000;0.949;0.989;0.993;1.000;1.000;0.981;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011527 : ABC transporter type 1, transmembrane domain
GO :
0005524 : Molecular Function : ATP binding
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
0042626 : Molecular Function : ATPase activity, coupled to transmembrane movement of substances
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223003)
HIX0223003
HIT000689069 (
ENST00000577103
)
(Multidrug resistance-associated protein 6; ATP-binding cassette sub-family C member 6; Anthracycline resistance-associated protein; Multi-specific organic anion transporter E; MOAT-E;)
genome : 16,295,857 - 16,317,379 (21,523)
query : 1 - 1,381 (1,381/1,381)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, cyto 9.5, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223003)
HIX0223003
HIT000084222
(
AY078405
)
Representative transcript
(Multidrug resistance-associated protein 6; ATP-binding cassette sub-family C member 6; Anthracycline resistance-associated protein; Multi-specific organic anion transporter E; MOAT-E;)
genome : 16,315,051 - 16,317,337 (2,287)
query : 1 - 720 (720/745)
2 exons
identity = 0.990
3'(0.991;0.988)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.5, extr 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223003)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AB028737
Gallus
sp. (Chicken) : AJ851786
Monodelphis
sp. (Opossum) : ENSMODT00000007344
Pongo
sp. (Orangutan) : ENSPPYT00000008402
Rattus
sp. (Rat) : U73038
Macaca
sp. (Macaque) : XM_001109862
Pan
sp. (Chimpanzee) : XM_001166102
Canis
sp. (Dog) : XM_547113
HIX0223003
HIT000397891 (
NM_001079528
)
(Multidrug resistance-associated protein 6; ATP-binding cassette sub-family C member 6; Anthracycline resistance-associated protein; Multi-specific organic anion transporter E; MOAT-E;)
genome : 16,315,044 - 16,317,328 (2,285)
query : 1 - 718 (718/733)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.5, extr 10
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223003)
HIX0223003
HIT000053580
(
BC050733
)
(Multidrug resistance-associated protein 6; ATP-binding cassette sub-family C member 6; Anthracycline resistance-associated protein; Multi-specific organic anion transporter E; MOAT-E;)
genome : 16,315,044 - 16,317,313 (2,270)
query : 1 - 703 (703/718)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.5, extr 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223003)
HIX0223003
HIT000687879 (
ENST00000575728
)
(Multidrug resistance-associated protein 6; ATP-binding cassette sub-family C member 6; Anthracycline resistance-associated protein; Multi-specific organic anion transporter E; MOAT-E;)
genome : 16,315,044 - 16,317,324 (2,281)
query : 1 - 714 (714/714)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.5, extr 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223003)
HIX0223003
HIT000220983
(
U66689
)
(URG7 protein isoform 2.)
genome : 16,315,049 - 16,317,314 (2,266)
query : 1 - 701 (701/701)
2 exons
identity = 0.979
3'(0.984;0.917)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23, nucl 4, cyto 4, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223003)
HIX0223939
HIT000687155 (
ENST00000574883
)
(Hypothetical short protein.)
genome : 16,316,884 - 16,318,118 (1,235)
query : 1 - 542 (542/542)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 5, mito 5, cyto_mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223939)
HIX0202298
HIT000482415 (
ENST00000399336
)
(Nodal modulator 3; pM5 protein 3; Precursor;)
genome : 16,326,352 - 16,388,668 (62,317)
query : 1 - 4,353 (4,353/4,353)
31 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, E.R. 8, plas 4, E.R._golg 4, pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202298)
HIX0202298
HIT000688626 (
ENST00000576589
)
(Nodal modulator 3; pM5 protein 3; Precursor;)
genome : 16,326,387 - 16,337,084 (10,698)
query : 1 - 683 (683/683)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202298)
HIX0202298
HIT000315813 (
NM_001004067
)
(Nodal modulator 3; pM5 protein 3; Precursor;)
genome : 16,326,389 - 16,388,668 (62,280)
query : 1 - 4,316 (4,316/4,336)
31 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, E.R. 8, plas 4, E.R._golg 4, pero 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202298)
HIX0202298
HIT000108698 (
ENST00000263012
)
(Nodal modulator 3; pM5 protein 3; Precursor;)
genome : 16,326,458 - 16,388,663 (62,206)
query : 1 - 3,911 (3,911/3,911)
32 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, E.R. 7, pero 4.5, plas 4, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202298)
HIX0202298
HIT000637513 (
ENST00000538468
)
(Nodal modulator 3; pM5 protein 3; Precursor;)
genome : 16,326,490 - 16,388,656 (62,167)
query : 1 - 3,765 (3,765/3,765)
31 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, pero 9, cyto_nucl 8.5, plas 3, E.R._mito 2,
nucl 1.5, mito 1.5, E.R. 1.5, extr_plas 1.5, cysk_plas 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202298)
HIX0202298
HIT000687453 (
ENST00000575225
)
(Nodal modulator 3; pM5 protein 3; Precursor;)
genome : 16,326,490 - 16,388,656 (62,167)
query : 1 - 3,765 (3,765/3,765)
31 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, pero 9, cyto_nucl 8.5, plas 3, E.R._mito 2,
nucl 1.5, mito 1.5, E.R. 1.5, extr_plas 1.5, cysk_plas 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202298)
HIX0202298
HIT000685382 (
ENST00000572830
)
(Nodal modulator 3; pM5 protein 3; Precursor;)
genome : 16,340,874 - 16,345,957 (5,084)
query : 1 - 548 (548/548)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 14, cyto 9, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202298)
HIX0202298
HIT000683397 (
ENST00000570519
)
(Nodal modulator 3; pM5 protein 3; Precursor;)
genome : 16,345,407 - 16,355,406 (10,000)
query : 1 - 560 (560/560)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 18, cyto 10.5, cyto_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202298)
HIX0202298
HIT000688490 (
ENST00000576427
)
(Nodal modulator 1; pM5 protein; Precursor;)
genome : 16,345,609 - 16,349,911 (4,303)
query : 1 - 592 (592/592)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13.5, nucl 7.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202298)
HIX0223918
HIT000685574 (
ENST00000573044
)
(Conserved hypothetical protein.)
genome : 16,354,723 - 16,355,092 (370)
query : 1 - 370 (370/370)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, extr 4, cyto 3, golg 2, extr_plas 2,
cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223918)
HIX0202298
HIT000032903_03
(
BC006531
)
Representative transcript
(Nodal modulator 3; pM5 protein 3; Precursor;)
genome : 16,355,383 - 16,388,668 (33,286)
query : 1 - 2,937 (2,937/2,957)
20 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR008969 : Carboxypeptidase-like, regulatory domain
IPR013784 : Carbohydrate-binding-like fold
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10, nucl 6.5, pero 6.5,
mito_pero 5, mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202298)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK035957
Gallus
sp. (Chicken) : CR386453
Macaca
sp. (Macaque) : DQ148159
Pongo
sp. (Orangutan) : ENSPPYT00000008403
Tetraodon
sp. (Tetraodon) : GSTENT00022674001
Rattus
sp. (Rat) : XM_001080045
Bos
sp. (Cow) : XM_001251029
Monodelphis
sp. (Opossum) : XM_001376291
Canis
sp. (Dog) : XM_547112
Danio
sp. (Zebrafish) : XM_694119
Pan
sp. (Chimpanzee) : XR_022037
Equus
sp. (Horse) : XR_035799
HIX0202298
HIT000688352 (
ENST00000576269
)
(Nodal modulator 3; pM5 protein 3; Precursor;)
genome : 16,358,912 - 16,361,169 (2,258)
query : 1 - 394 (394/394)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 7.5, cyto_nucl 5.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202298)
HIX0202298
HIT000688520 (
ENST00000576460
)
(Nodal modulator 3; pM5 protein 3; Precursor;)
genome : 16,358,913 - 16,367,630 (8,718)
query : 1 - 516 (516/516)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 9.5, nucl 9, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202298)
HIX0202298
HIT000684703 (
ENST00000572033
)
(Conserved hypothetical protein.)
genome : 16,358,990 - 16,367,709 (8,720)
query : 1 - 551 (551/551)
5 exons
identity = 0.993
5'(1.000;0.957;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202298)
HIX0202298
HIT000687166 (
ENST00000574894
)
(Nodal modulator 3; pM5 protein 3; Precursor;)
genome : 16,367,698 - 16,372,058 (4,361)
query : 1 - 1,269 (1,269/1,269)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.5, cyto 17, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202298)
HIX0202298
HIT000686532_01 (
ENST00000574157
)
(Nodal modulator 1; pM5 protein; Precursor;)
genome : 16,372,343 - 16,381,677 (9,335)
query : 1 - 821 (821/821)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.5, nucl 15, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202298)
HIX0202298
HIT000685473_01 (
ENST00000572932
)
(Nodal modulator 1; pM5 protein; Precursor;)
genome : 16,374,067 - 16,382,506 (8,440)
query : 1 - 623 (623/623)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, extr 12, cyto_nucl 9.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202298)
HIX0202298
HIT000088191_03
(
BC013837
)
(Nodal modulator 3; pM5 protein 3; Precursor;)
genome : 16,376,871 - 16,388,663 (11,793)
query : 6 - 1,072 (1,067/1,095)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, pero 5, extr 4, nucl 4, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202298)
HIX0202298
HIT000686077_01 (
ENST00000573635
)
(Nodal modulator 2; pM5 protein 2; Precursor;)
genome : 16,380,558 - 16,388,667 (8,110)
query : 1 - 1,898 (1,898/1,898)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, pero 6, nucl 5, plas 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202298)
HIX0202298
HIT000682465_01 (
ENST00000569526
)
(Nodal modulator 3; pM5 protein 3; Precursor;)
genome : 16,381,228 - 16,387,561 (6,334)
query : 1 - 545 (545/545)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 14, cyto_nucl 6.83333, cyto 6, extr 5, nucl 4.5,
cyto_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202298)
HIX0223265
HIT000684374_01 (
ENST00000571660
)
(Hypothetical short protein.)
genome : 16,383,992 - 16,386,099 (2,108)
query : 1 - 567 (567/567)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223265)
HIX0223265
HIT000684597_01 (
ENST00000571911
)
(Hypothetical protein.)
genome : 16,386,035 - 16,388,663 (2,629)
query : 1 - 2,278 (2,278/2,278)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 14.5, cyto 10.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223265)
HIX0202298
HIT000683579_01 (
ENST00000570732
)
(Nodal modulator 3; pM5 protein 3; Precursor;)
genome : 16,387,069 - 16,388,134 (1,066)
query : 1 - 643 (643/643)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202298)
HIX0202298
HIT000683248_01 (
ENST00000570346
)
(Nodal modulator 3; pM5 protein 3; Precursor;)
genome : 16,387,540 - 16,388,160 (621)
query : 1 - 320 (320/320)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 4, cyto_nucl 3, nucl 2, cyto 2,
E.R._mito 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202298)
HIX0212006
HIT000661672_01 (
ENST00000547549
)
(Hypothetical short protein.)
genome : 16,394,007 - 16,394,683 (677)
query : 1 - 677 (677/677)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, extr_plas 13.5, plas 10, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212006)
HIX0212006
HIT000659403_02 (
NR_036140
)
(Non-protein coding transcript.)
genome : 16,394,016 - 16,394,099 (84)
query : 1 - 84 (84/84)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212006)
HIX0212006
HIT000659406_02 (
NR_036143
)
(Non-protein coding transcript.)
genome : 16,394,016 - 16,394,099 (84)
query : 1 - 84 (84/84)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212006)
HIX0212006
HIT000659408_02 (
NR_036145
)
(Non-protein coding transcript.)
genome : 16,394,016 - 16,394,099 (84)
query : 1 - 84 (84/84)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212006)
HIX0212006
HIT000690876_02 (
ENST00000578940
)
(Non-protein coding transcript.)
genome : 16,394,016 - 16,394,099 (84)
query : 1 - 84 (84/84)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212006)
HIX0212006
HIT000691041_02 (
ENST00000579107
)
(Non-protein coding transcript.)
genome : 16,394,016 - 16,394,099 (84)
query : 1 - 84 (84/84)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212006)
HIX0212006
HIT000691493_02 (
ENST00000579566
)
(Non-protein coding transcript.)
genome : 16,394,016 - 16,394,099 (84)
query : 1 - 84 (84/84)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212006)
HIX0212006
HIT000666197_01 (
ENST00000552753
)
(Hypothetical short protein.)
genome : 16,394,142 - 16,394,684 (543)
query : 1 - 543 (543/543)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, extr_plas 13.5, plas 10, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212006)
HIX0173369
HIT000456464_07
(
DQ589933
)
Representative transcript
(Non-protein coding transcript.)
genome : 16,400,124 - 16,400,153 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173369)
HIX0223287
HIT000694857_02 (
ENST00000582974
)
(Non-protein coding transcript.)
genome : 16,400,227 - 16,400,291 (65)
query : 1 - 65 (65/65)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223287)
HIX0223287
HIT000696034_02 (
ENST00000584160
)
(Non-protein coding transcript.)
genome : 16,400,227 - 16,400,291 (65)
query : 1 - 65 (65/65)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223287)
HIX0223287
HIT000696719_02 (
ENST00000584855
)
(Non-protein coding transcript.)
genome : 16,400,227 - 16,400,291 (65)
query : 1 - 65 (65/65)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223287)
HIX0223287
HIT000725533_02 (
NR_037442
)
(Non-protein coding transcript.)
genome : 16,400,227 - 16,400,291 (65)
query : 1 - 65 (65/65)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223287)
HIX0223287
HIT000727236_02 (
NR_049832
)
(Non-protein coding transcript.)
genome : 16,400,227 - 16,400,291 (65)
query : 1 - 65 (65/65)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223287)
HIX0173272
HIT000097608_03
(
BC043290
)
Representative transcript
(Hypothetical protein.)
genome : 16,402,399 - 16,403,857 (1,459)
query : 3 - 1,463 (1,461/1,478)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173272)
HIX0212009
HIT000660834_01 (
ENST00000546612
)
(Hypothetical protein.)
genome : 16,402,399 - 16,403,857 (1,459)
query : 1 - 1,459 (1,459/1,459)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, extr 9.5, extr_plas 6.5, nucl 4, pero 4,
plas 2.5, mito_pero 2.5, mito_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212009)
HIX0212009
HIT000663624_01 (
ENST00000549796
)
(Hypothetical protein.)
genome : 16,402,399 - 16,403,857 (1,459)
query : 1 - 1,459 (1,459/1,459)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, extr 9.5, extr_plas 6.5, nucl 4, pero 4,
plas 2.5, mito_pero 2.5, mito_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212009)
HIX0212009
HIT000659404_02 (
NR_036141
)
(Non-protein coding transcript.)
genome : 16,403,732 - 16,403,825 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212009)
HIX0212009
HIT000659407_02 (
NR_036144
)
(Non-protein coding transcript.)
genome : 16,403,732 - 16,403,825 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212009)
HIX0212009
HIT000692289_02 (
ENST00000580374
)
(Non-protein coding transcript.)
genome : 16,403,732 - 16,403,825 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212009)
HIX0212009
HIT000693649_02 (
ENST00000581748
)
(Non-protein coding transcript.)
genome : 16,403,732 - 16,403,825 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212009)
HIX0212009
HIT000696483_02 (
ENST00000584616
)
(Non-protein coding transcript.)
genome : 16,403,732 - 16,403,825 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212009)
HIX0212009
HIT000659405_02 (
NR_036142
)
(Non-protein coding transcript.)
genome : 16,403,736 - 16,403,823 (88)
query : 1 - 88 (88/88)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212009)
HIX0012839
HIT000643623_02 (
ENST00000544578
)
(Polycystin-1; Autosomal dominant polycystic kidney disease 1 protein; Precursor;)
genome : 16,404,078 - 16,411,033 (6,956)
query : 1 - 727 (727/727)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, cyto_mito 11.6667, cyto_nucl 7.5, cyto 6,
nucl 5.5, cyto_pero 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000556603 (
ENST00000458669
)
(Polycystin-1; Autosomal dominant polycystic kidney disease 1 protein; Precursor;)
genome : 16,404,198 - 16,428,047 (23,850)
query : 1 - 6,805 (6,805/6,805)
32 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.3333, cyto 10.5,
cyto_pero 6.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0173387
HIT000465003_09
(
DQ598472
)
Representative transcript
(Non-protein coding transcript.)
genome : 16,405,201 - 16,405,230 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173387)
HIX0012839
HIT000639084_01 (
ENST00000540039
)
(Polycystin-1; Autosomal dominant polycystic kidney disease 1 protein; Precursor;)
genome : 16,411,301 - 16,412,832 (1,532)
query : 1 - 571 (571/571)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 5, cyto_nucl 3.83333, cyto_pero 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000659551 (
NR_036447
)
(Polycystin-1; Autosomal dominant polycystic kidney disease 1 protein homolog; Precursor;)
genome : 16,411,466 - 16,444,465 (33,000)
query : 1 - 6,295 (6,295/6,295)
31 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000499450
(
AK304826
)
(Polycystin-1; Autosomal dominant polycystic kidney disease 1 protein homolog; Precursor;)
genome : 16,411,466 - 16,418,660 (7,195)
query : 1 - 2,519 (2,519/2,519)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.999;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000635305 (
ENST00000536260
)
(Polycystin-1; Autosomal dominant polycystic kidney disease 1 protein homolog; Precursor;)
genome : 16,411,466 - 16,418,660 (7,195)
query : 1 - 2,519 (2,519/2,519)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000640960 (
ENST00000541915
)
(Polycystin-1; Autosomal dominant polycystic kidney disease 1 protein homolog; Precursor;)
genome : 16,411,466 - 16,418,660 (7,195)
query : 1 - 2,519 (2,519/2,519)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000046671
(
AK126798
)
(Polycystin-1; Autosomal dominant polycystic kidney disease 1 protein; Precursor;)
genome : 16,414,953 - 16,434,356 (19,404)
query : 5 - 3,729 (3,725/3,729)
21 exons
identity = 0.994
5'(1.000;0.945;0.978;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.936;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR000601 : PKD domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12, cyto 8, extr 5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000044389
(
AK124516
)
(Nuclear pore complex-interacting protein.)
genome : 16,416,162 - 16,444,443 (28,282)
query : 15 - 4,528 (4,514/4,528)
24 exons
identity = 0.995
5'(0.992;0.914;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 0.997
InterPro :
IPR000203 : GPS motif
IPR000434 : Polycystic kidney disease type 1 protein
IPR001024 : PLAT/LH2 domain
IPR008976 : Lipase/lipooxygenase, PLAT/LH2
GO :
0005515 : Molecular Function : protein binding
0007218 : Biological Process : neuropeptide signaling pathway
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000636157 (
ENST00000537112
)
(Nuclear pore complex-interacting protein.)
genome : 16,416,162 - 16,444,443 (28,282)
query : 1 - 4,514 (4,514/4,514)
24 exons
identity = 0.996
5'(1.000;0.914;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000636130_01 (
ENST00000537085
)
(Polycystin-1; Autosomal dominant polycystic kidney disease 1 protein homolog; Precursor;)
genome : 16,416,206 - 16,418,384 (2,179)
query : 1 - 543 (543/543)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, extr 7, cyto_nucl 6, cyto 5.5, E.R._mito 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000638785_01 (
ENST00000539740
)
(Polycystin-1; Autosomal dominant polycystic kidney disease 1 protein homolog; Precursor;)
genome : 16,416,206 - 16,418,384 (2,179)
query : 1 - 543 (543/543)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, extr 7, cyto_nucl 6, cyto 5.5, E.R._mito 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000634761_01 (
ENST00000535716
)
(Polycystin-1; Autosomal dominant polycystic kidney disease 1 protein homolog; Precursor;)
genome : 16,416,376 - 16,418,384 (2,009)
query : 1 - 563 (563/563)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10.5, extr 7, nucl 6.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000453569_05
(
DQ587038
)
(Non-protein coding transcript.)
genome : 16,417,111 - 16,417,141 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000637265_02 (
ENST00000538220
)
(Polycystin-1; Autosomal dominant polycystic kidney disease 1 protein; Precursor;)
genome : 16,418,886 - 16,420,753 (1,868)
query : 1 - 558 (558/558)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000053001_03
(
BC046145
)
Representative transcript
(NPIP-like protein 1-like.)
genome : 16,425,734 - 16,444,438 (18,705)
query : 1 - 1,543 (1,543/1,557)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009443 : Nuclear pore complex interacting protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000009022
HIX0012839
HIT000362775_05 (
ENST00000381497
)
(NPIP-like protein 1-like.)
genome : 16,425,734 - 16,444,447 (18,714)
query : 1 - 1,552 (1,552/1,552)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000525933_01 (
ENST00000427999
)
(NPIP-like protein 1-like.)
genome : 16,425,734 - 16,444,442 (18,709)
query : 1 - 1,547 (1,547/1,547)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000095884_03
(
BC039707
)
(Nuclear pore complex-interacting protein.)
genome : 16,427,503 - 16,444,450 (16,948)
query : 12 - 1,533 (1,522/1,547)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.993
InterPro :
IPR009443 : Nuclear pore complex interacting protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 10.5, extr 7, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000644159_01 (
ENST00000545114
)
(Nuclear pore complex-interacting protein.)
genome : 16,427,504 - 16,444,451 (16,948)
query : 1 - 1,522 (1,522/1,522)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 10.5, extr 7, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000637130_01 (
ENST00000538085
)
(NPIP-like protein 1-like.)
genome : 16,427,505 - 16,441,312 (13,808)
query : 1 - 664 (664/664)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 11, cyto 10, nucl 5, cyto_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000632097_01 (
ENST00000533010
)
(Nuclear pore complex-interacting protein-like 1; Precursor;)
genome : 16,427,594 - 16,438,266 (10,673)
query : 1 - 756 (756/756)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, mito 11, cyto_nucl 11, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000633319_01 (
ENST00000534258
)
(Nuclear pore complex-interacting protein.)
genome : 16,427,594 - 16,434,358 (6,765)
query : 1 - 621 (621/621)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 8, E.R._mito 7.83333, extr 6, mito_pero 6,
plas 5, E.R. 4.5, cyto_plas 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000127231_03 (
ENST00000331436
)
(NPIP-like protein 1-like.)
genome : 16,429,787 - 16,444,435 (14,649)
query : 1 - 1,129 (1,129/1,129)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000640855_01 (
ENST00000541810
)
(NPIP-like protein 1-like.)
genome : 16,429,787 - 16,444,435 (14,649)
query : 1 - 1,129 (1,129/1,129)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000630580_01 (
ENST00000531453
)
(NPIP-like protein 1-like.)
genome : 16,429,787 - 16,444,301 (14,515)
query : 1 - 1,065 (1,065/1,065)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 10.5, extr 7, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000642846_02 (
ENST00000543801
)
(NPIP-like protein 1-like.)
genome : 16,429,787 - 16,444,060 (14,274)
query : 1 - 824 (824/824)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 10.5, extr 7, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000640638_02 (
ENST00000541593
)
(NPIP-like protein 1-like.)
genome : 16,429,787 - 16,443,142 (13,356)
query : 1 - 699 (699/699)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 10.5, extr 7, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000635006_01 (
ENST00000535961
)
(NPIP-like protein 1-like.)
genome : 16,429,882 - 16,437,962 (8,081)
query : 1 - 599 (599/599)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, cyto_nucl 6.33333, cyto 5, mito 5, nucl 4.5,
cyto_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000642273_01 (
ENST00000543228
)
(Nuclear pore complex-interacting protein.)
genome : 16,429,882 - 16,434,291 (4,410)
query : 1 - 538 (538/538)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 6.33333, cyto 5, mito 5, nucl 4.5,
cyto_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000624072 (
ENST00000524823
)
(NPIP-like protein 1-like.)
genome : 16,434,185 - 16,443,173 (8,989)
query : 1 - 1,141 (1,141/1,141)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, cyto_mito 13, cyto 11.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000627483_02 (
ENST00000528301
)
(NPIP-like protein 1-like.)
genome : 16,434,185 - 16,442,703 (8,519)
query : 1 - 671 (671/671)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 11.5, cyto_mito 8, cyto 3.5, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000112315_03 (
ENST00000283050
)
(NPIP-like protein 1-like.)
genome : 16,434,229 - 16,441,490 (7,262)
query : 1 - 539 (539/539)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 17, extr 8, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000625380_02 (
ENST00000526166
)
(NPIP-like protein 1-like.)
genome : 16,434,229 - 16,441,490 (7,262)
query : 1 - 539 (539/539)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 17, extr 8, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000493005
(
AK298381
)
(NPIP-like protein 1-like.)
genome : 16,437,952 - 16,443,173 (5,222)
query : 1 - 983 (983/983)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR009443 : Nuclear pore complex interacting protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000626898_03 (
ENST00000527703
)
(NPIP-like protein 1-like.)
genome : 16,438,227 - 16,444,060 (5,834)
query : 1 - 470 (470/470)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 8, cyto 8, mito_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000034862_03
(
BC010188
)
(Nuclear pore complex-interacting protein.)
genome : 16,438,244 - 16,444,438 (6,195)
query : 1 - 761 (761/781)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009443 : Nuclear pore complex interacting protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 11, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0211992
HIT000459721_06
(
DQ593190
)
Representative transcript
(Non-protein coding transcript.)
genome : 16,440,736 - 16,440,765 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211992)
HIX0012839
HIT000136717_03 (
ENST00000344087
)
(Nuclear pore complex-interacting protein-like 3.)
genome : 16,441,327 - 16,444,301 (2,975)
query : 1 - 561 (561/561)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000033658_05
(
BC008178
)
(Nuclear pore complex-interacting protein.)
genome : 16,443,388 - 16,444,450 (1,063)
query : 1 - 1,062 (1,062/1,077)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR009443 : Nuclear pore complex interacting protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 7.5, E.R._mito 7.5, cyto_pero 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0012839
HIT000002376_05
(
AF229069
)
(Nuclear pore complex-interacting protein.)
genome : 16,443,948 - 16,444,443 (496)
query : 1 - 496 (496/496)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 8, cyto_nucl 7.83333, cyto_pero 5,
nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012839)
HIX0223198
HIT000702066_08 (
ENST00000590231
)
(Phospholipase A2 domain containing protein.)
genome : 16,445,403 - 16,445,510 (108)
query : 1 - 108 (108/108)
1 exon
identity = 0.972
3'(0.972)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 7, cyto_nucl 6.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223198)
HIX0223198
HIT000677152_02 (
ENST00000564015
)
(Hypothetical protein.)
genome : 16,445,405 - 16,492,451 (47,047)
query : 1 - 258 (258/258)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, nucl 10, cyto 6, mito_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223198)
HIX0223198
HIT000682209_08 (
ENST00000569264
)
(Phospholipase A2 family protein.)
genome : 16,445,405 - 16,445,510 (106)
query : 1 - 106 (106/106)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto_nucl 4, nucl 3.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223198)
HIX0223030
HIT000631834 (
ENST00000532739
)
(PKD domain containing protein.)
genome : 16,450,081 - 16,471,364 (21,284)
query : 1 - 9,932 (9,932/9,932)
31 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9, plas 6, cyto_mito 6, nucl 5, E.R. 4,
cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223030)
HIX0223030
HIT000429094
(
AK310228
)
Representative transcript
(Polycystic kidney disease type 1 protein family protein.)
genome : 16,464,997 - 16,469,696 (4,700)
query : 1 - 2,344 (2,344/2,344)
8 exons
identity = 0.994
5'(0.990;0.981;0.992;0.990;0.994;0.993;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR000203 : GPS motif
IPR000434 : Polycystic kidney disease type 1 protein
IPR001024 : PLAT/LH2 domain
IPR008976 : Lipase/lipooxygenase, PLAT/LH2
GO :
0005515 : Molecular Function : protein binding
0007218 : Biological Process : neuropeptide signaling pathway
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223030)
HIX0223030
HIT000624825_01 (
ENST00000525596
)
(Nuclear pore complex interacting protein family protein.)
genome : 16,469,028 - 16,487,806 (18,779)
query : 1 - 1,565 (1,565/1,565)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14, mito 6, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223030)
HIX0223030
HIT000629369_01 (
ENST00000530217
)
(Nuclear pore complex interacting protein family protein.)
genome : 16,472,912 - 16,487,811 (14,900)
query : 1 - 1,331 (1,331/1,331)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14, mito 6, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223030)
HIX0223030
HIT000520607_02 (
ENST00000422673
)
(Nuclear pore complex interacting protein family protein.)
genome : 16,481,306 - 16,486,537 (5,232)
query : 1 - 984 (984/984)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12.5, nucl 7.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223030)
HIX0223030
HIT000644095_01 (
ENST00000545050
)
(Hypothetical protein.)
genome : 16,481,519 - 16,486,490 (4,972)
query : 1 - 391 (391/391)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, mito 6, nucl 5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223030)
HIX0223030
HIT000125195_03 (
ENST00000327792
)
(Hypothetical protein.)
genome : 16,481,598 - 16,487,799 (6,202)
query : 1 - 758 (758/758)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 12, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223030)
HIX0223030
HIT000136717_04 (
ENST00000344087
)
(Hypothetical protein.)
genome : 16,484,691 - 16,487,665 (2,975)
query : 1 - 561 (561/561)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223030)
HIX0224054
HIT000249877
(
AK160377
)
Representative transcript
(Nuclear pore complex-interacting protein.)
genome : 15,016,659 - 15,045,915 (29,257)
query : 1 - 5,343 (5,343/5,343)
28 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;1.000;0.999;1.000;0.996;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009443 : Nuclear pore complex interacting protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 10.5, mito_nucl 10.5, cyto_nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224054)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XR_020714
HIX0224054
HIT000576789 (
ENST00000472413
)
(Nuclear pore complex-interacting protein.)
genome : 15,016,659 - 15,045,915 (29,257)
query : 1 - 5,343 (5,343/5,343)
28 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 10.5, mito_nucl 10.5, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224054)
HIX0224054
HIT000333911
(
BC023572
)
(Nuclear pore complex-interacting protein.)
genome : 15,021,140 - 15,045,919 (24,780)
query : 10 - 2,887 (2,878/2,951)
21 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.987;0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224054)
HIX0224054
HIT000640881 (
ENST00000541836
)
(Nuclear pore complex-interacting protein.)
genome : 15,021,140 - 15,045,731 (24,592)
query : 1 - 2,747 (2,747/2,747)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, pero 3, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224054)
HIX0224054
HIT000334125
(
BC063821
)
(Nuclear pore complex-interacting protein.)
genome : 15,026,427 - 15,045,916 (19,490)
query : 349 - 3,593 (3,245/3,609)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.999)3'
coverage = 0.903
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 4, cyto 4, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224054)
HIX0019757
HIT000676823 (
ENST00000563679
)
(Pyridoxal-dependent decarboxylase domain-containing protein 1.)
genome : 15,068,448 - 15,130,535 (62,088)
query : 1 - 2,963 (2,963/2,963)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019757)
HIX0019757
HIT000124348 (
ENST00000325823
)
(Pyridoxal-dependent decarboxylase domain-containing protein 1.)
genome : 15,068,599 - 15,130,535 (61,937)
query : 1 - 2,812 (2,812/2,812)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 16, nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019757)
HIX0019757
HIT000489792
(
AK295168
)
(Pyridoxal-dependent decarboxylase domain-containing protein 1.)
genome : 15,068,599 - 15,130,535 (61,937)
query : 1 - 2,814 (2,814/2,814)
23 exons
identity = 0.998
5'(1.000;1.000;1.000;0.988;0.993;1.000;1.000;
1.000;1.000;1.000;0.990;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994)3'
coverage = 1.000
InterPro :
IPR002129 : Pyridoxal phosphate-dependent decarboxylase
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0016831 : Molecular Function : carboxy-lyase activity
0019752 : Biological Process : carboxylic acid metabolic process
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 15.5, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019757)
HIX0019757
HIT000494423
(
AK299799
)
(Pyridoxal-dependent decarboxylase domain-containing protein 1.)
genome : 15,068,675 - 15,130,251 (61,577)
query : 1 - 2,533 (2,533/2,533)
22 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.990;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
InterPro :
IPR002129 : Pyridoxal phosphate-dependent decarboxylase
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0016831 : Molecular Function : carboxy-lyase activity
0019752 : Biological Process : carboxylic acid metabolic process
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15.5, nucl 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019757)
HIX0019757
HIT000545846 (
ENST00000447912
)
(Pyridoxal-dependent decarboxylase domain-containing protein 1.)
genome : 15,068,675 - 15,130,251 (61,577)
query : 1 - 2,533 (2,533/2,533)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15.5, nucl 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019757)
HIX0019757
HIT000317179 (
NM_015027
)
(Pyridoxal-dependent decarboxylase domain-containing protein 1; EC=4.1.1.-;)
genome : 15,068,833 - 15,131,551 (62,719)
query : 1 - 4,010 (4,010/4,032)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 15, nucl 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019757)
HIX0019757
HIT000098036
(
BC045554
)
(Pyridoxal-dependent decarboxylase domain-containing protein 1.)
genome : 15,068,869 - 15,233,196 (164,328)
query : 1 - 2,048 (2,048/2,062)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR002129 : Pyridoxal phosphate-dependent decarboxylase
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0016831 : Molecular Function : carboxy-lyase activity
0019752 : Biological Process : carboxylic acid metabolic process
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13, nucl 8.5, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019757)
HIX0019757
HIT000259373
(
BC053946
)
(Pyridoxal-dependent decarboxylase domain-containing protein 1.)
genome : 15,068,869 - 15,233,196 (164,328)
query : 1 - 2,048 (2,048/2,062)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR002129 : Pyridoxal phosphate-dependent decarboxylase
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0016831 : Molecular Function : carboxy-lyase activity
0019752 : Biological Process : carboxylic acid metabolic process
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13, nucl 8.5, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019757)
HIX0019757
HIT000634666 (
ENST00000535621
)
(Pyridoxal-dependent decarboxylase domain-containing protein 1.)
genome : 15,068,869 - 15,233,196 (164,328)
query : 1 - 2,048 (2,048/2,048)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13, nucl 8.5, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019757)
HIX0019757
HIT000041935
(
BC033748
)
(Pyridoxal-dependent decarboxylase domain-containing protein 1.)
genome : 15,068,937 - 15,123,658 (54,722)
query : 1 - 2,178 (2,178/2,220)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.980;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR002129 : Pyridoxal phosphate-dependent decarboxylase
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0016831 : Molecular Function : carboxy-lyase activity
0019752 : Biological Process : carboxylic acid metabolic process
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14, nucl 8, pero 3, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019757)
HIX0019757
HIT000553247 (
ENST00000455313
)
(Pyridoxal-dependent decarboxylase domain-containing protein 1.)
genome : 15,068,937 - 15,123,662 (54,726)
query : 1 - 2,183 (2,183/2,183)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14, nucl 8, pero 3, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019757)
HIX0019757
HIT000675327 (
ENST00000562119
)
(Pyridoxal-dependent decarboxylase domain-containing protein 1.)
genome : 15,068,946 - 15,130,054 (61,109)
query : 1 - 884 (884/884)
8 exons
identity = 0.985
5'(1.000;1.000;1.000;0.909;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 16, nucl 7, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019757)
HIX0019757
HIT000259084
(
BC036520
)
(Pyridoxal-dependent decarboxylase domain-containing protein 1.)
genome : 15,068,962 - 15,131,544 (62,583)
query : 7 - 4,834 (4,828/4,888)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 0.999
InterPro :
IPR002129 : Pyridoxal phosphate-dependent decarboxylase
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0016831 : Molecular Function : carboxy-lyase activity
0019752 : Biological Process : carboxylic acid metabolic process
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 8, cysk 3, mito 2, pero 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019757)
HIX0019757
HIT000479757 (
ENST00000396410
)
(Pyridoxal-dependent decarboxylase domain-containing protein 1; EC=4.1.1.-;)
genome : 15,068,960 - 15,131,552 (62,593)
query : 1 - 3,884 (3,884/3,884)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 15, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019757)
HIX0019757
HIT000042384
(
D87438
)
Representative transcript
(Pyridoxal-dependent decarboxylase domain-containing protein 1; EC=4.1.1.-;)
genome : 15,068,960 - 15,131,543 (62,584)
query : 1 - 3,875 (3,875/3,875)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.1.1.-
InterPro :
IPR002129 : Pyridoxal phosphate-dependent decarboxylase
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0016831 : Molecular Function : carboxy-lyase activity
0019752 : Biological Process : carboxylic acid metabolic process
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 15, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019757)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB173641
Mus
sp. (Mouse) : AK054329
Danio
sp. (Zebrafish) : BC081619
Bos
sp. (Cow) : BC151480
Gallus
sp. (Chicken) : CR407411
Equus
sp. (Horse) : ENSECAT00000020969
Monodelphis
sp. (Opossum) : ENSMODT00000005745
Pongo
sp. (Orangutan) : ENSPPYT00000008392
Rattus
sp. (Rat) : ENSRNOT00000003284
Takifugu
sp. (Fugu) : SINFRUT00000131875
Pan
sp. (Chimpanzee) : XM_510837
Canis
sp. (Dog) : XM_858061
HIX0019757
HIT000682920 (
ENST00000570001
)
(Pyridoxal-dependent decarboxylase domain-containing protein 1.)
genome : 15,068,962 - 15,131,544 (62,583)
query : 1 - 4,828 (4,828/4,828)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 8, cysk 3, mito 2, pero 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019757)
HIX0019757
HIT000056456
(
BX647809
)
(Pyridoxal-dependent decarboxylase domain-containing protein 1.)
genome : 15,068,980 - 15,131,544 (62,565)
query : 2 - 3,779 (3,778/3,797)
22 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.995;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
InterPro :
IPR002129 : Pyridoxal phosphate-dependent decarboxylase
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0016831 : Molecular Function : carboxy-lyase activity
0019752 : Biological Process : carboxylic acid metabolic process
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.5, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019757)
HIX0019757
HIT000682650 (
ENST00000569715
)
(Pyridoxal-dependent decarboxylase domain-containing protein 1; EC=4.1.1.-;)
genome : 15,068,980 - 15,131,544 (62,565)
query : 1 - 3,775 (3,775/3,775)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 4.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 15, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019757)
HIX0019757
HIT000056713
(
BX648066
)
(Pyridoxal-dependent decarboxylase domain-containing protein 1.)
genome : 15,068,983 - 15,131,544 (62,562)
query : 2 - 3,775 (3,774/3,785)
22 exons
identity = 0.997
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000;0.990;0.984;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.996)3'
coverage = 1.000
InterPro :
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, nucl 9.5, cyto 7.5, mito 7,
E.R._mito 6.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019757)
HIX0019757
HIT000260173
(
BC060871
)
(Pyridoxal-dependent decarboxylase domain-containing protein 1; EC=4.1.1.-;)
genome : 15,068,986 - 15,132,189 (63,204)
query : 1 - 4,497 (4,497/4,512)
23 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.980;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998)3'
coverage = 1.000
EC number :
EC 4.1.1.-
InterPro :
IPR002129 : Pyridoxal phosphate-dependent decarboxylase
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0016831 : Molecular Function : carboxy-lyase activity
0019752 : Biological Process : carboxylic acid metabolic process
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14, nucl 6.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019757)
HIX0019757
HIT000493735
(
AK299111
)
(Pyridoxal-dependent decarboxylase domain-containing protein 1.)
genome : 15,068,986 - 15,130,461 (61,476)
query : 1 - 2,685 (2,685/2,685)
22 exons
identity = 0.997
5'(1.000;1.000;0.984;0.993;1.000;1.000;1.000;
1.000;1.000;0.990;0.992;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.993)3'
coverage = 1.000
InterPro :
IPR002129 : Pyridoxal phosphate-dependent decarboxylase
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0016831 : Molecular Function : carboxy-lyase activity
0019752 : Biological Process : carboxylic acid metabolic process
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 15, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019757)
HIX0019757
HIT000548222 (
ENST00000450288
)
(Pyridoxal-dependent decarboxylase domain-containing protein 1.)
genome : 15,068,986 - 15,130,461 (61,476)
query : 1 - 2,683 (2,683/2,683)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 15, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019757)
HIX0019757
HIT000251014
(
AY203955
)
(Pyridoxal-dependent decarboxylase domain-containing protein 1.)
genome : 15,069,009 - 15,233,181 (164,173)
query : 1 - 1,827 (1,827/1,843)
16 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.921;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 9, nucl 9, mito 8, cyto 4, E.R._mito 4,
mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019757)
HIX0019757
HIT000091068
(
BC025366
)
(Pyridoxal-dependent decarboxylase domain-containing protein 1.)
genome : 15,102,634 - 15,131,551 (28,918)
query : 1 - 3,211 (3,211/3,245)
17 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR002129 : Pyridoxal phosphate-dependent decarboxylase
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0016831 : Molecular Function : carboxy-lyase activity
0019752 : Biological Process : carboxylic acid metabolic process
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 8, cyto_nucl 7.66667, nucl 7.5, cyto 6.5,
mito 5.5, cyto_pero 4.83333, E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019757)
HIX0224065
HIT000681731 (
ENST00000568766
)
(Mpv17/PMP22 family protein.)
genome : 15,489,611 - 15,609,205 (119,595)
query : 1 - 498 (498/498)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 7, cyto_nucl 7, E.R._mito 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224065)
HIX0224065
HIT000680451 (
ENST00000567442
)
(Conserved hypothetical protein.)
genome : 15,489,807 - 15,609,190 (119,384)
query : 1 - 476 (476/476)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 10, cyto 10, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224065)
HIX0224065
HIT000681206 (
ENST00000568222
)
(Conserved hypothetical protein.)
genome : 15,489,807 - 15,609,190 (119,384)
query : 1 - 652 (652/652)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9, cyto_nucl 9, nucl 8, cyto 8, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224065)
HIX0012833
HIT000317136 (
NM_014647
)
(Meiosis arrest female protein 1; Limkain-b1;)
genome : 15,688,226 - 15,737,023 (48,798)
query : 1 - 7,760 (7,760/7,760)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012833)
HIX0012833
HIT000655523 (
NM_001184998
)
(Meiosis arrest female protein 1; Limkain-b1;)
genome : 15,688,226 - 15,737,023 (48,798)
query : 1 - 7,760 (7,760/7,760)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012833)
HIX0012833
HIT000655524 (
NM_001184999
)
(Meiosis arrest female protein 1; Limkain-b1;)
genome : 15,688,226 - 15,737,023 (48,798)
query : 1 - 7,751 (7,751/7,751)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16.5, cyto 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012833)
HIX0012833
HIT000096594
(
BC041135
)
(Meiosis arrest female protein 1 isoform 1.)
genome : 15,688,244 - 15,733,150 (44,907)
query : 6 - 7,104 (7,099/7,118)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.996;
0.988;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR021139 : NYN domain, limkain-b1-type
IPR024768 : Meiosis arrest female protein 1
IPR025605 : OST-HTH/LOTUS domain
IPR029060 : PIN domain-like
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0005777 : Cellular Component : peroxisome
0010468 : Biological Process : regulation of gene expression
0048477 : Biological Process : oogenesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012833)
HIX0012833
HIT000479717 (
ENST00000396368
)
(Meiosis arrest female protein 1; Limkain-b1;)
genome : 15,688,243 - 15,737,023 (48,781)
query : 1 - 7,743 (7,743/7,743)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012833)
HIX0012833
HIT000639486 (
ENST00000540441
)
(Meiosis arrest female protein 1 isoform 1.)
genome : 15,688,244 - 15,733,150 (44,907)
query : 6 - 7,105 (7,100/7,105)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012833)
HIX0012833
HIT000136811 (
ENST00000344181
)
(Meiosis arrest female protein 1 isoform 3.)
genome : 15,688,245 - 15,737,009 (48,765)
query : 1 - 7,325 (7,325/7,325)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012833)
HIX0012833
HIT000000147
(
AB007890
)
(Meiosis arrest female protein 1 isoform 2.)
genome : 15,688,245 - 15,729,636 (41,392)
query : 1 - 6,827 (6,827/6,827)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.996;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 15, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012833)
HIX0012833
HIT000501123
(
BC137165
)
Representative transcript
(Meiosis arrest female protein 1; Limkain-b1;)
genome : 15,690,028 - 15,736,965 (46,938)
query : 1 - 5,900 (5,900/5,900)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR021139 : NYN domain, limkain-b1-type
IPR024582 : Limkain b1, conserved domain
IPR024768 : Meiosis arrest female protein 1
IPR025605 : OST-HTH/LOTUS domain
IPR029060 : PIN domain-like
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0005777 : Cellular Component : peroxisome
0010468 : Biological Process : regulation of gene expression
0048477 : Biological Process : oogenesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012833)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB012133
Macaca
sp. (Macaque) : AB173562
Mus
sp. (Mouse) : AK035704
Gallus
sp. (Chicken) : CR524167
Equus
sp. (Horse) : ENSECAT00000014735
Pongo
sp. (Orangutan) : ENSPPYT00000008396
Tetraodon
sp. (Tetraodon) : GSTENT00011844001
Takifugu
sp. (Fugu) : SINFRUT00000146250
Pan
sp. (Chimpanzee) : XM_001149220
Monodelphis
sp. (Opossum) : XM_001374939
Bos
sp. (Cow) : XM_583086
Canis
sp. (Dog) : XM_857910
Rattus
sp. (Rat) : XR_006793
HIX0012833
HIT000501128
(
BC137170
)
(Meiosis arrest female protein 1; Limkain-b1;)
genome : 15,690,028 - 15,736,965 (46,938)
query : 1 - 5,900 (5,900/5,900)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR021139 : NYN domain, limkain-b1-type
IPR024582 : Limkain b1, conserved domain
IPR024768 : Meiosis arrest female protein 1
IPR025605 : OST-HTH/LOTUS domain
IPR029060 : PIN domain-like
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0005777 : Cellular Component : peroxisome
0010468 : Biological Process : regulation of gene expression
0048477 : Biological Process : oogenesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012833)
HIX0012833
HIT000502923
(
BC144514
)
(Meiosis arrest female protein 1; Limkain-b1;)
genome : 15,690,028 - 15,736,965 (46,938)
query : 1 - 5,900 (5,900/5,900)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR021139 : NYN domain, limkain-b1-type
IPR024582 : Limkain b1, conserved domain
IPR024768 : Meiosis arrest female protein 1
IPR025605 : OST-HTH/LOTUS domain
IPR029060 : PIN domain-like
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0005777 : Cellular Component : peroxisome
0010468 : Biological Process : regulation of gene expression
0048477 : Biological Process : oogenesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012833)
HIX0012833
HIT000502924
(
BC144515
)
(Meiosis arrest female protein 1; Limkain-b1;)
genome : 15,690,028 - 15,736,965 (46,938)
query : 1 - 5,891 (5,891/5,891)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;0.995;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.995;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR021139 : NYN domain, limkain-b1-type
IPR024582 : Limkain b1, conserved domain
IPR024768 : Meiosis arrest female protein 1
IPR025605 : OST-HTH/LOTUS domain
IPR029060 : PIN domain-like
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0005777 : Cellular Component : peroxisome
0010468 : Biological Process : regulation of gene expression
0048477 : Biological Process : oogenesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012833)
HIX0012833
HIT000662078 (
ENST00000548025
)
(Meiosis arrest female protein 1; Limkain-b1;)
genome : 15,690,028 - 15,736,965 (46,938)
query : 1 - 5,891 (5,891/5,891)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012833)
HIX0012833
HIT000665313 (
ENST00000551742
)
(Meiosis arrest female protein 1; Limkain-b1;)
genome : 15,690,028 - 15,736,965 (46,938)
query : 1 - 5,900 (5,900/5,900)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012833)
HIX0012833
HIT000714070 (
ENST00000602337
)
(Meiosis arrest female protein 1; Limkain-b1;)
genome : 15,690,028 - 15,736,965 (46,938)
query : 1 - 5,891 (5,891/5,891)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012833)
HIX0012833
HIT000666027 (
ENST00000552553
)
(Meiosis arrest female protein 1 isoform 2.)
genome : 15,690,550 - 15,733,090 (42,541)
query : 1 - 5,053 (5,053/5,053)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012833)
HIX0012835
HIT000130912 (
ENST00000338282
)
(Myosin-11; Myosin heavy chain 11; Myosin heavy chain, smooth muscle isoform; SMMHC;)
genome : 15,796,992 - 15,950,887 (153,896)
query : 1 - 6,921 (6,921/6,921)
42 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 10.5, cyto_mito 6, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012835)
HIX0012835
HIT000199367 (
NM_002474
)
(Myosin-11; Myosin heavy chain 11; Myosin heavy chain, smooth muscle isoform; SMMHC;)
genome : 15,796,992 - 15,950,887 (153,896)
query : 1 - 6,882 (6,882/6,882)
41 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 10.5, cyto_mito 6, cysk 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012835)
HIX0012835
HIT000208910 (
NM_022844
)
(Myosin-11; Myosin heavy chain 11; Myosin heavy chain, smooth muscle isoform; SMMHC;)
genome : 15,796,992 - 15,950,887 (153,896)
query : 1 - 6,921 (6,921/6,921)
42 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 10.5, cyto_mito 6, cysk 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012835)
HIX0012835
HIT000366669 (
NM_001040113
)
(Myosin-11; Myosin heavy chain 11; Myosin heavy chain, smooth muscle isoform; SMMHC;)
genome : 15,796,992 - 15,950,887 (153,896)
query : 1 - 6,942 (6,942/6,942)
43 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 10.5, cyto_mito 6, cysk 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012835)
HIX0012835
HIT000366670 (
NM_001040114
)
(Myosin-11; Myosin heavy chain 11; Myosin heavy chain, smooth muscle isoform; SMMHC;)
genome : 15,796,992 - 15,950,887 (153,896)
query : 1 - 6,903 (6,903/6,903)
42 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 10.5, cyto_mito 6, cysk 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012835)
HIX0012835
HIT000484986
(
EU489063
)
(Myosin-11; Myosin heavy chain 11; Myosin heavy chain, smooth muscle isoform; SMMHC;)
genome : 15,796,992 - 15,950,887 (153,896)
query : 1 - 6,941 (6,941/6,941)
42 exons
identity = 0.998
3'(1.000;0.974;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.903;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR001609 : Myosin head, motor domain
IPR002928 : Myosin tail
IPR004009 : Myosin, N-terminal, SH3-like
IPR008989 : Myosin S1 fragment, N-terminal
IPR027401 : Myosin-like IQ motif-containing domain
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
0051015 : Molecular Function : actin filament binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 10.5, cyto_mito 6, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012835)
HIX0012835
HIT000000583
(
AB020673
)
(Myosin-11; Myosin heavy chain 11; Myosin heavy chain, smooth muscle isoform; SMMHC;)
genome : 15,796,996 - 15,950,855 (153,860)
query : 1 - 6,846 (6,846/6,846)
41 exons
identity = 1.000
3'(1.000;1.000;1.000;0.990;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 10.5, cyto_mito 6, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012835)
HIX0012835
HIT000331877
(
AY520816
)
(Myosin-11; Myosin heavy chain 11; Myosin heavy chain, smooth muscle isoform; SMMHC;)
genome : 15,797,029 - 15,950,868 (153,840)
query : 1 - 6,847 (6,847/6,847)
42 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR001609 : Myosin head, motor domain
IPR002928 : Myosin tail
IPR004009 : Myosin, N-terminal, SH3-like
IPR008989 : Myosin S1 fragment, N-terminal
IPR027401 : Myosin-like IQ motif-containing domain
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
0051015 : Molecular Function : actin filament binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 10.5, cyto_mito 6, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012835)
HIX0012835
HIT000331878
(
AY520817
)
Representative transcript
(Myosin-11; Myosin heavy chain 11; Myosin heavy chain, smooth muscle isoform; SMMHC;)
genome : 15,797,029 - 15,950,868 (153,840)
query : 1 - 6,886 (6,886/6,886)
43 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.991;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR001609 : Myosin head, motor domain
IPR002928 : Myosin tail
IPR004009 : Myosin, N-terminal, SH3-like
IPR008989 : Myosin S1 fragment, N-terminal
IPR027401 : Myosin-like IQ motif-containing domain
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
0051015 : Molecular Function : actin filament binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 10.5, cyto_mito 6, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012835)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AY953023
Bos
sp. (Cow) : BC148029
Mus
sp. (Mouse) : D85924
Danio
sp. (Zebrafish) : DQ022376
Oryzias
sp. (Medaka) : ENSORLT00000016975
Pan
sp. (Chimpanzee) : ENSPTRT00000014380
Tetraodon
sp. (Tetraodon) : GSTENT00021277001
Gallus
sp. (Chicken) : X06546
Macaca
sp. (Macaque) : XM_001109374
Monodelphis
sp. (Opossum) : XM_001365941
Equus
sp. (Horse) : XM_001916756
Canis
sp. (Dog) : XM_857511
HIX0012835
HIT000479673 (
ENST00000396324
)
(Myosin-11; Myosin heavy chain 11; Myosin heavy chain, smooth muscle isoform; SMMHC;)
genome : 15,797,029 - 15,950,868 (153,840)
query : 1 - 6,847 (6,847/6,847)
42 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 10.5, cyto_mito 6, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012835)
HIX0012835
HIT000550559 (
ENST00000452625
)
(Myosin-11; Myosin heavy chain 11; Myosin heavy chain, smooth muscle isoform; SMMHC;)
genome : 15,797,029 - 15,950,868 (153,840)
query : 1 - 6,886 (6,886/6,886)
43 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 10.5, cyto_mito 6, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012835)
HIX0012835
HIT000688801 (
ENST00000576790
)
(Myosin-11 isoform SM2A.)
genome : 15,797,644 - 15,950,890 (153,247)
query : 1 - 6,273 (6,273/6,273)
42 exons
identity = 1.000
3'(1.000;0.975;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 10.5, cyto_mito 6, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012835)
HIX0012835
HIT000115523 (
ENST00000300036
)
(Myosin-11; Myosin heavy chain 11; Myosin heavy chain, smooth muscle isoform; SMMHC;)
genome : 15,797,848 - 15,950,890 (153,043)
query : 1 - 6,029 (6,029/6,029)
41 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 10.5, cyto_mito 6, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012835)
HIX0012835
HIT000337031
(
BC101677
)
(Myosin-11 isoform SM2A.)
genome : 15,802,659 - 15,950,851 (148,193)
query : 1 - 5,897 (5,897/5,907)
41 exons
identity = 0.999
3'(1.000;1.000;0.991;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;1.000;1.000;0.994;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR001609 : Myosin head, motor domain
IPR002928 : Myosin tail
IPR004009 : Myosin, N-terminal, SH3-like
IPR008989 : Myosin S1 fragment, N-terminal
IPR027401 : Myosin-like IQ motif-containing domain
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
0051015 : Molecular Function : actin filament binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 10.5, cyto_mito 6, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012835)
HIX0012835
HIT000337994
(
BC104906
)
(Myosin-11 isoform SM2A.)
genome : 15,802,659 - 15,950,851 (148,193)
query : 1 - 5,897 (5,897/5,907)
41 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.997;1.000)5'
coverage = 0.998
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR001609 : Myosin head, motor domain
IPR002928 : Myosin tail
IPR004009 : Myosin, N-terminal, SH3-like
IPR008989 : Myosin S1 fragment, N-terminal
IPR027401 : Myosin-like IQ motif-containing domain
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
0051015 : Molecular Function : actin filament binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 10.5, cyto_mito 6, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012835)
HIX0012835
HIT000501822
(
BC143364
)
(Myosin-11 isoform SM2B.)
genome : 15,802,659 - 15,950,851 (148,193)
query : 1 - 5,918 (5,918/5,924)
42 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.997;1.000)5'
coverage = 0.999
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR001609 : Myosin head, motor domain
IPR002928 : Myosin tail
IPR004009 : Myosin, N-terminal, SH3-like
IPR008989 : Myosin S1 fragment, N-terminal
IPR027401 : Myosin-like IQ motif-containing domain
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
0051015 : Molecular Function : actin filament binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 10.5, cyto_mito 6, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012835)
HIX0012835
HIT000427255
(
AK308389
)
(Myosin-11; Myosin heavy chain 11; Myosin heavy chain, smooth muscle isoform; SMMHC; Fragments;)
genome : 15,814,029 - 15,950,884 (136,856)
query : 1 - 3,590 (3,590/3,590)
27 exons
identity = 0.999
3'(1.000;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001609 : Myosin head, motor domain
IPR004009 : Myosin, N-terminal, SH3-like
IPR008989 : Myosin S1 fragment, N-terminal
GO :
0003774 : Molecular Function : motor activity
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
0051015 : Molecular Function : actin filament binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 15.5, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012835)
HIX0026937
HIT000102793 (
ENST00000205557
)
(Multi drug resistance-associated protein family protein.)
genome : 16,242,785 - 16,317,321 (74,537)
query : 1 - 5,747 (5,747/5,747)
31 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026937)
HIX0026937
HIT000198171 (
NM_001171
)
(Multi drug resistance-associated protein family protein.)
genome : 16,243,422 - 16,317,328 (73,907)
query : 1 - 5,117 (5,117/5,125)
31 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;0.994;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026937)
HIX0026937
HIT000066192
(
AF076622
)
Representative transcript
(Multidrug resistance-associated protein 6; ATP-binding cassette sub-family C member 6; Anthracycline resistance-associated protein; Multi-specific organic anion transporter E; MOAT-E;)
genome : 16,243,990 - 16,317,314 (73,325)
query : 1 - 4,535 (4,535/4,535)
31 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;0.994;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.989;1.000)5'
coverage = 1.000
InterPro :
IPR003439 : ABC transporter-like
IPR003593 : AAA+ ATPase domain
IPR005292 : Multi drug resistance-associated protein
IPR011527 : ABC transporter type 1, transmembrane domain
IPR017871 : ABC transporter, conserved site
GO :
0000166 : Molecular Function : nucleotide binding
0005215 : Molecular Function : transporter activity
0005524 : Molecular Function : ATP binding
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
0016887 : Molecular Function : ATPase activity
0017111 : Molecular Function : nucleoside-triphosphatase activity
0042626 : Molecular Function : ATPase activity, coupled to transmembrane movement of substances
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026937)
HIX0026937
HIT000390634
(
BC131732
)
(Multidrug resistance-associated protein 6; ATP-binding cassette sub-family C member 6; Anthracycline resistance-associated protein; Multi-specific organic anion transporter E; MOAT-E;)
genome : 16,243,990 - 16,317,314 (73,325)
query : 1 - 4,535 (4,535/4,535)
31 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;0.994;
1.000;1.000;0.974;0.989;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003439 : ABC transporter-like
IPR003593 : AAA+ ATPase domain
IPR005292 : Multi drug resistance-associated protein
IPR011527 : ABC transporter type 1, transmembrane domain
IPR017871 : ABC transporter, conserved site
GO :
0000166 : Molecular Function : nucleotide binding
0005215 : Molecular Function : transporter activity
0005524 : Molecular Function : ATP binding
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
0016887 : Molecular Function : ATPase activity
0017111 : Molecular Function : nucleoside-triphosphatase activity
0042626 : Molecular Function : ATPase activity, coupled to transmembrane movement of substances
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026937)
HIX0026937
HIT000434843
(
AM711638
)
(Multidrug resistance-associated protein 6; ATP-binding cassette sub-family C member 6; Anthracycline resistance-associated protein; Multi-specific organic anion transporter E; MOAT-E;)
genome : 16,243,990 - 16,317,291 (73,302)
query : 1 - 4,137 (4,137/4,137)
29 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR003439 : ABC transporter-like
IPR003593 : AAA+ ATPase domain
IPR011527 : ABC transporter type 1, transmembrane domain
IPR017871 : ABC transporter, conserved site
GO :
0000166 : Molecular Function : nucleotide binding
0005524 : Molecular Function : ATP binding
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
0016887 : Molecular Function : ATPase activity
0017111 : Molecular Function : nucleoside-triphosphatase activity
0042626 : Molecular Function : ATPase activity, coupled to transmembrane movement of substances
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026937)
HIX0026937
HIT000434853
(
AM774324
)
(Multidrug resistance-associated protein 6; ATP-binding cassette sub-family C member 6; Anthracycline resistance-associated protein; Multi-specific organic anion transporter E; MOAT-E;)
genome : 16,243,990 - 16,317,291 (73,302)
query : 1 - 4,512 (4,512/4,512)
31 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;0.995;1.000;1.000;0.994;0.994;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.972)5'
coverage = 1.000
InterPro :
IPR003439 : ABC transporter-like
IPR003593 : AAA+ ATPase domain
IPR005292 : Multi drug resistance-associated protein
IPR011527 : ABC transporter type 1, transmembrane domain
IPR017871 : ABC transporter, conserved site
GO :
0000166 : Molecular Function : nucleotide binding
0005215 : Molecular Function : transporter activity
0005524 : Molecular Function : ATP binding
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
0016887 : Molecular Function : ATPase activity
0017111 : Molecular Function : nucleoside-triphosphatase activity
0042626 : Molecular Function : ATPase activity, coupled to transmembrane movement of substances
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026937)
HIX0026937
HIT000554904 (
ENST00000456970
)
(ABC transporter-like domain containing protein.)
genome : 16,243,990 - 16,317,291 (73,302)
query : 1 - 4,137 (4,137/4,137)
29 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026937)
HIX0026937
HIT000072322
(
AF168791
)
(Multidrug resistance-associated protein 6; ATP-binding cassette sub-family C member 6; Anthracycline resistance-associated protein; Multi-specific organic anion transporter E; MOAT-E;)
genome : 16,243,993 - 16,317,291 (73,299)
query : 1 - 4,509 (4,509/4,509)
31 exons
identity = 0.999
3'(1.000;0.995;1.000;1.000;0.993;1.000;0.992;
1.000;1.000;1.000;1.000;1.000;0.994;0.994;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003439 : ABC transporter-like
IPR003593 : AAA+ ATPase domain
IPR005292 : Multi drug resistance-associated protein
IPR011527 : ABC transporter type 1, transmembrane domain
IPR017871 : ABC transporter, conserved site
GO :
0000166 : Molecular Function : nucleotide binding
0005215 : Molecular Function : transporter activity
0005524 : Molecular Function : ATP binding
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
0016887 : Molecular Function : ATPase activity
0017111 : Molecular Function : nucleoside-triphosphatase activity
0042626 : Molecular Function : ATPase activity, coupled to transmembrane movement of substances
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026937)
HIX0224067
HIT000006650
(
AK023376
)
Representative transcript
(Polycystic kidney disease type 1 protein family protein.)
genome : 16,419,535 - 16,469,926 (50,392)
query : 1 - 3,257 (3,257/3,257)
12 exons
identity = 0.983
5'(0.988;1.000;0.986;0.994;0.976;0.985;0.959;
0.972;0.972;0.984;0.990;0.978)3'
coverage = 1.000
InterPro :
IPR000203 : GPS motif
IPR000434 : Polycystic kidney disease type 1 protein
IPR001024 : PLAT/LH2 domain
IPR008976 : Lipase/lipooxygenase, PLAT/LH2
GO :
0005515 : Molecular Function : protein binding
0007218 : Biological Process : neuropeptide signaling pathway
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224067)
AC138932.4
15000001-15133023 F -
NCBI
AC139256.5
15133024-15248482 F -
NCBI
AC126763.4
15248483-15433285 F -
NCBI
AC137803.2
15433286-15500960 F -
NCBI
AC140504.2
15500961-15612447 F +
NCBI
AC026401.7
15612448-15802510 F -
NCBI
AF001548.1
15802511-15926584 F -
NCBI
AC024120.5
15926585-15926694 F +
NCBI
AC130651.2
15926695-16079016 F +
NCBI
AC025778.8
16079017-16187664 F -
NCBI
AC136624.3
16187665-16397112 F -
NCBI
AC138969.2
16397113-16483262 F -
NCBI
AC136619.3
16483263-16600000 F +
NCBI