bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0223158
HIT000675762 (
ENST00000562572
)
(Domain of unknown function DUF4455 domain containing protein.)
genome : 34,442,308 - 34,518,517 (76,210)
query : 1 - 476 (476/476)
2 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223158)
HIX0173409
HIT000506692 (
ENST00000408605
)
(Non-protein coding transcript.)
genome : 34,510,863 - 34,510,964 (102)
query : 1 - 102 (102/102)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173409)
HIX0223810
HIT000681771 (
ENST00000568807
)
(Protein FRG2 family protein.)
genome : 34,569,648 - 34,571,260 (1,613)
query : 1 - 832 (832/832)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 6, cyto_nucl 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223810)
HIX0223596
HIT000678258 (
ENST00000565168
)
(Conserved hypothetical protein.)
genome : 34,578,462 - 34,578,930 (469)
query : 1 - 469 (469/469)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 9, cyto_mito 9, cyto_pero 9,
cyto_plas 9, cyto_golg 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223596)
HIX0223417
HIT000675099 (
ENST00000561884
)
(Conserved hypothetical protein.)
genome : 34,581,756 - 34,582,668 (913)
query : 1 - 913 (913/913)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 5, extr 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223417)
HIX0223607
HIT000678477 (
ENST00000565394
)
(Uncharacterised protein family UPF0565 protein.)
genome : 34,586,853 - 34,587,393 (541)
query : 1 - 541 (541/541)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 9.16667, cyto 8, cyto_pero 6.33333,
nucl 6, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223607)
HIX0038613
HIT000674972 (
ENST00000561756
)
(Hypothetical short protein.)
genome : 34,597,783 - 34,616,837 (19,055)
query : 1 - 665 (665/665)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, mito 12, cyto_mito 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038613)
HIX0038613
HIT000095369
(
BC038774
)
(Hypothetical protein.)
genome : 34,597,787 - 34,626,084 (28,298)
query : 1 - 1,371 (1,371/1,388)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.994;0.998)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 7.33333, cyto 6.5, mito 6,
cyto_pero 4.33333, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038613)
HIX0038613
HIT000563242 (
NR_027080
)
(Conserved hypothetical protein.)
genome : 34,597,787 - 34,626,084 (28,298)
query : 1 - 1,371 (1,371/1,371)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.994;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 7.33333, cyto 6.5, mito 6,
cyto_pero 4.33333, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038613)
HIX0038613
HIT000098058
(
BC045579
)
Representative transcript
(Angiogenic factor with G patch and FHA domains 1; Angiogenic factor VG5Q; hVG5Q; G patch domain-containing protein 7; Vasculogenesis gene on 5q protein;)
genome : 34,597,902 - 34,624,954 (27,053)
query : 1 - 2,800 (2,800/2,815)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 12.5, extr 12, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038613)
HIX0038613
HIT000563241 (
NR_027079
)
(Conserved hypothetical protein.)
genome : 34,597,902 - 34,624,958 (27,057)
query : 1 - 2,804 (2,804/2,804)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 7, cyto 7, E.R._mito 7,
cyto_nucl 6.33333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038613)
HIX0038613
HIT000682187 (
ENST00000569242
)
(Angiogenic factor with G patch and FHA domains 1; Angiogenic factor VG5Q; hVG5Q; G patch domain-containing protein 7; Vasculogenesis gene on 5q protein;)
genome : 34,597,902 - 34,624,955 (27,054)
query : 1 - 2,801 (2,801/2,801)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 12.5, extr 12, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038613)
HIX0223748
HIT000680865 (
ENST00000567870
)
(Conserved hypothetical protein.)
genome : 34,618,515 - 34,619,457 (943)
query : 1 - 615 (615/615)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223748)
HIX0223775
HIT000681233 (
ENST00000568249
)
(Forkhead-associated (FHA) domain containing protein.)
genome : 34,623,574 - 34,624,374 (801)
query : 1 - 801 (801/801)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223775)
HIX0223515
HIT000676726 (
ENST00000563581
)
(Conserved hypothetical protein.)
genome : 34,640,118 - 34,641,720 (1,603)
query : 1 - 781 (781/781)
4 exons
identity = 0.996
3'(1.000;1.000;1.000;0.981)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 8, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223515)
HIX0223722
HIT000680362 (
ENST00000567349
)
(Conserved hypothetical protein.)
genome : 34,648,650 - 34,649,118 (469)
query : 1 - 469 (469/469)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 10, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223722)
HIX0223751
HIT000680895 (
ENST00000567900
)
(Conserved hypothetical protein.)
genome : 34,654,662 - 34,655,580 (919)
query : 1 - 919 (919/919)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 19, extr 6, nucl 3, mito 3, extr_plas 3,
mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223751)
HIX0223615
HIT000678615 (
ENST00000565542
)
(Conserved hypothetical protein.)
genome : 34,659,735 - 34,660,854 (1,120)
query : 1 - 1,120 (1,120/1,120)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 8, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223615)
HIX0223144
HIT000681592 (
ENST00000568619
)
(Conserved hypothetical protein.)
genome : 34,681,269 - 34,683,395 (2,127)
query : 1 - 1,211 (1,211/1,211)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 22, mito 6, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223144)
HIX0223144
HIT000675278 (
ENST00000562068
)
(Conserved hypothetical protein.)
genome : 34,681,269 - 34,682,778 (1,510)
query : 1 - 1,510 (1,510/1,510)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 27, mito 2, pero 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223144)
HIX0038799
HIT000563152 (
NR_026980
)
(Protein FRG2-like-2; FSHD region gene 2 protein family member C; HSA3-FRG2;)
genome : 34,711,785 - 34,714,967 (3,183)
query : 1 - 1,820 (1,820/1,820)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 12, extr 11, nucl 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038799)
HIX0038799
HIT000681980 (
ENST00000569028
)
(Protein FRG2-like-2; FSHD region gene 2 protein family member C; HSA3-FRG2;)
genome : 34,711,785 - 34,714,829 (3,045)
query : 1 - 1,570 (1,570/1,570)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 12, extr 11, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038799)
HIX0038799
HIT000090808
(
BC023607
)
Representative transcript
(Protein FRG2-like-2; FSHD region gene 2 protein family member C; HSA3-FRG2;)
genome : 34,711,914 - 34,714,829 (2,916)
query : 1 - 1,441 (1,441/1,457)
2 exons
identity = 0.999
3'(1.000;0.997)5'
coverage = 1.000
InterPro :
IPR026245 : Protein FRG2
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 12, extr 11, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038799)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XR_024488
HIX0038799
HIT000677573 (
ENST00000564452
)
(Protein FRG2; FSHD region gene 2 protein;)
genome : 34,712,350 - 34,714,852 (2,503)
query : 1 - 852 (852/852)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038799)
HIX0038799
HIT000679990 (
ENST00000566967
)
(Protein FRG2; FSHD region gene 2 protein;)
genome : 34,712,988 - 34,713,810 (823)
query : 1 - 323 (323/323)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, mito 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038799)
HIX0223553
HIT000677440 (
ENST00000564312
)
(Conserved hypothetical protein.)
genome : 34,720,137 - 34,720,596 (460)
query : 1 - 460 (460/460)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 11, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223553)
HIX0223832
HIT000682159 (
ENST00000569213
)
(Conserved hypothetical protein.)
genome : 34,723,608 - 34,724,583 (976)
query : 1 - 976 (976/976)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 6.5, extr 5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223832)
HIX0223670
HIT000679597 (
ENST00000566562
)
(Hypothetical short protein.)
genome : 34,725,545 - 34,726,766 (1,222)
query : 1 - 480 (480/480)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 11, cyto_nucl 9.66667,
cyto_pero 3.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223670)
HIX0223423
HIT000675243 (
ENST00000562032
)
(Uncharacterised protein family UPF0565 protein.)
genome : 34,726,695 - 34,727,817 (1,123)
query : 1 - 1,123 (1,123/1,123)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14, cyto 11.5, mito 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223423)
HIX0223752
HIT000680897 (
ENST00000567902
)
(Conserved hypothetical protein.)
genome : 34,728,125 - 34,730,828 (2,704)
query : 1 - 572 (572/572)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223752)
HIX0038833
HIT000659173 (
NR_034018
)
(Conserved hypothetical protein.)
genome : 34,739,460 - 34,740,840 (1,381)
query : 1 - 599 (599/609)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 6, cyto_nucl 4.83333, nucl 4, cyto 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038833)
HIX0038833
HIT000659174 (
NR_034019
)
(Hypothetical short protein.)
genome : 34,739,460 - 34,740,840 (1,381)
query : 1 - 470 (470/480)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, extr 4, cyto 3.5, cyto_nucl 3, nucl 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038833)
HIX0038833
HIT000095356
(
BC038761
)
Representative transcript
(Hypothetical short protein.)
genome : 34,739,465 - 34,740,833 (1,369)
query : 1 - 458 (458/472)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, extr 4, cyto 3.5, cyto_nucl 3, nucl 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038833)
HIX0038833
HIT000675780 (
ENST00000562591
)
(Hypothetical short protein.)
genome : 34,739,464 - 34,740,833 (1,370)
query : 1 - 459 (459/459)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, extr 4, cyto 3.5, cyto_nucl 3, nucl 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038833)
HIX0223176
HIT000682688 (
ENST00000569755
)
(Conserved hypothetical protein.)
genome : 34,740,963 - 34,741,541 (579)
query : 1 - 579 (579/579)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 6, cyto_pero 4.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223176)
HIX0223176
HIT000676639 (
ENST00000563487
)
(Conserved hypothetical protein.)
genome : 34,740,963 - 34,741,308 (346)
query : 1 - 346 (346/346)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 10.5, nucl 8.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223176)
HIX0134822
HIT000451782
(
DQ585251
)
Representative transcript
(Non-protein coding transcript.)
genome : 34,741,014 - 34,741,044 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0134822)
HIX0223632
HIT000678899 (
ENST00000565840
)
(Non-protein coding transcript.)
genome : 34,763,493 - 34,763,688 (196)
query : 1 - 196 (196/196)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223632)
HIX0223660
HIT000679373 (
ENST00000566335
)
(Conserved hypothetical protein.)
genome : 34,777,650 - 34,778,016 (367)
query : 1 - 367 (367/367)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 9, nucl 5, cyto_mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223660)
HIX0223438
HIT000675570 (
ENST00000562369
)
(Conserved hypothetical protein.)
genome : 34,782,288 - 34,783,200 (913)
query : 1 - 913 (913/913)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 4, cyto 1, E.R. 1, pero 1, lyso 1,
cyto_pero 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223438)
HIX0223512
HIT000676681 (
ENST00000563532
)
(Uncharacterised protein family UPF0565 protein.)
genome : 34,787,280 - 34,788,372 (1,093)
query : 1 - 1,093 (1,093/1,093)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 10.5, extr 10, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223512)
HIX0223764
HIT000681092 (
ENST00000568105
)
(Conserved hypothetical protein.)
genome : 34,809,205 - 34,809,865 (661)
query : 1 - 661 (661/661)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 9.5, cyto_nucl 8, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223764)
HIX0223736
HIT000680590 (
ENST00000567585
)
(Conserved hypothetical protein.)
genome : 34,872,994 - 34,879,551 (6,558)
query : 1 - 2,755 (2,755/2,755)
7 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;0.957;0.980;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223736)
HIX0223668
HIT000679485 (
ENST00000566449
)
(Hypothetical short protein.)
genome : 34,874,400 - 34,874,953 (554)
query : 1 - 554 (554/554)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223668)
HIX0223637
HIT000678990 (
ENST00000565935
)
(Conserved hypothetical protein.)
genome : 34,956,639 - 34,956,900 (262)
query : 1 - 262 (262/262)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 12.5, extr 11, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223637)
HIX0212227
HIT000616218 (
ENST00000516815
)
(Non-protein coding transcript.)
genome : 34,969,996 - 34,970,104 (109)
query : 1 - 109 (109/109)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212227)
HIX0028135
HIT000675948 (
ENST00000562769
)
(Hypothetical short protein.)
genome : 34,977,639 - 34,989,997 (12,359)
query : 1 - 594 (594/594)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, nucl 4, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028135)
HIX0028135
HIT000049027
(
AK129756
)
Representative transcript
(Conserved hypothetical protein.)
genome : 34,980,923 - 34,990,995 (10,073)
query : 1 - 1,598 (1,598/1,598)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 7, cyto_nucl 5.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028135)
HIX0028135
HIT000659142 (
NR_033985
)
(Conserved hypothetical protein.)
genome : 34,980,923 - 34,990,995 (10,073)
query : 1 - 1,598 (1,598/1,598)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 7, cyto_nucl 5.5, nucl 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028135)
HIX0028135
HIT000679926 (
ENST00000566900
)
(Hypothetical protein.)
genome : 34,980,923 - 34,990,886 (9,964)
query : 1 - 1,489 (1,489/1,489)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 7, cyto_nucl 5.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028135)
HIX0028135
HIT000615637 (
ENST00000516234
)
(Non-protein coding transcript.)
genome : 34,981,143 - 34,981,265 (123)
query : 1 - 123 (123/123)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028135)
HIX0028135
HIT000678692 (
ENST00000565625
)
(Hypothetical short protein.)
genome : 34,982,728 - 34,990,167 (7,440)
query : 1 - 726 (726/726)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, mito 7, extr 5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028135)
HIX0028135
HIT000615983 (
ENST00000516580
)
(Non-protein coding transcript.)
genome : 34,982,891 - 34,983,026 (136)
query : 1 - 136 (136/136)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028135)
HIX0212229
HIT000616241 (
ENST00000516838
)
(Non-protein coding transcript.)
genome : 34,985,945 - 34,986,055 (111)
query : 1 - 111 (111/111)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212229)
HIX0212218
HIT000615862 (
ENST00000516459
)
(Non-protein coding transcript.)
genome : 34,986,199 - 34,986,306 (108)
query : 1 - 108 (108/108)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212218)
HIX0212209
HIT000615354 (
ENST00000515951
)
(Non-protein coding transcript.)
genome : 34,987,197 - 34,987,313 (117)
query : 1 - 117 (117/117)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212209)
HIX0212208
HIT000615311 (
ENST00000515908
)
(Hypothetical short protein.)
genome : 34,988,167 - 34,988,301 (135)
query : 1 - 135 (135/135)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212208)
HIX0212232
HIT000616400 (
ENST00000516997
)
(Non-protein coding transcript.)
genome : 34,988,417 - 34,988,553 (137)
query : 1 - 137 (137/137)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212232)
HIX0212230
HIT000616267 (
ENST00000516864
)
(Non-protein coding transcript.)
genome : 34,988,926 - 34,989,059 (134)
query : 1 - 134 (134/134)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212230)
HIX0212225
HIT000616181 (
ENST00000516778
)
(Non-protein coding transcript.)
genome : 34,989,294 - 34,989,404 (111)
query : 1 - 111 (111/111)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212225)
HIX0212236
HIT000616530 (
ENST00000517127
)
(Non-protein coding transcript.)
genome : 34,989,548 - 34,989,656 (109)
query : 1 - 109 (109/109)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212236)
HIX0038786
HIT000088933
(
BC016176
)
Representative transcript
(Hypothetical short protein.)
genome : 35,019,940 - 35,021,258 (1,319)
query : 1 - 1,319 (1,319/1,334)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 8, nucl 3, mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038786)
HIX0223559
HIT000677509 (
ENST00000564385
)
(Hypothetical protein.)
genome : 35,019,940 - 35,021,258 (1,319)
query : 1 - 1,319 (1,319/1,319)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 10, cyto_nucl 8, nucl 4, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223559)
HIX0223846
HIT000682433 (
ENST00000569492
)
(High mobility group nucleosome-binding domain-containing family protein.)
genome : 35,037,240 - 35,037,651 (412)
query : 1 - 412 (412/412)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223846)
HIX0223541
HIT000677199 (
ENST00000564064
)
(Conserved hypothetical protein.)
genome : 35,071,257 - 35,072,103 (847)
query : 1 - 847 (847/847)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, mito 11, cyto_nucl 5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223541)
HIX0223546
HIT000677335 (
ENST00000564203
)
(Conserved hypothetical protein.)
genome : 35,113,407 - 35,113,869 (463)
query : 1 - 463 (463/463)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, cyto 3.5, cyto_mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223546)
HIX0173410
HIT000506737 (
ENST00000408653
)
(Non-protein coding transcript.)
genome : 35,136,344 - 35,136,453 (110)
query : 1 - 110 (110/110)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173410)
HIX0223407
HIT000674968 (
ENST00000561752
)
(Conserved hypothetical protein.)
genome : 35,146,491 - 35,146,887 (397)
query : 1 - 397 (397/397)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223407)
AC023824.6
34500001-34502339 F -
NCBI
AC007353.5
34502340-34632711 F -
NCBI
AC018558.6
34632712-34769642 F +
NCBI
AC092325.2
34769643-34917093 F -
NCBI
AC106785.3
34917094-35086739 F +
NCBI
AC116553.2
35086740-35170008 F -
NCBI
AC109490.3
35170009-35285801 F -
NCBI
50000
35285802-35335801 N
3000000
35335802-36100000 N