bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0194410
pHIT000116058 ( pHIT000116058 )
Representative transcript
(Hypothetical short protein.)
genome : 85,536,424 - 85,585,521 (49,098)
query : 1 - 231 (231/231)
4 exons
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194410)
CAGE tag :
T16F05028F15
HIX0224021
HIT000714595 (
ENST00000602862
)
(Hypothetical short protein.)
genome : 85,613,615 - 85,617,177 (3,563)
query : 1 - 601 (601/601)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224021)
HIX0038778
HIT000087983
(
BC012990
)
Representative transcript
(Hypothetical protein.)
genome : 85,625,872 - 85,629,322 (3,451)
query : 1 - 3,450 (3,450/3,473)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, nucl 8.5, cyto_nucl 8.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038778)
HIX0223699
HIT000680113 (
ENST00000567093
)
(Conserved hypothetical protein.)
genome : 85,625,872 - 85,629,326 (3,455)
query : 1 - 3,455 (3,455/3,455)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 6, nucl 4, cyto_mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223699)
HIX0013308
pHIT000027764 ( pHIT000027764 )
(Genetic suppressor element 1 isoform 1.)
genome : 85,640,724 - 85,706,145 (65,422)
query : 1 - 3,303 (3,303/3,303)
16 exons
InterPro :
IPR022207 : Genetic suppressor element-like
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013308)
CAGE tag :
H39BB31G0101
HIX0013308
HIT000051933
(
BC037556
)
(Genetic suppressor element 1 isoform 3.)
genome : 85,645,023 - 85,706,960 (61,938)
query : 19 - 4,375 (4,357/4,390)
15 exons
identity = 0.999
5'(0.983;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.997;1.000;1.000;
1.000)3'
coverage = 0.996
InterPro :
IPR022207 : Genetic suppressor element-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 17.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013308)
HIX0013308
HIT000505214 (
ENST00000405402
)
(Genetic suppressor element 1 isoform 2.)
genome : 85,645,015 - 85,706,960 (61,946)
query : 1 - 4,366 (4,366/4,366)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 17.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013308)
HIX0013308
HIT000559944 (
NM_001134473
)
(Genetic suppressor element 1 isoform 2.)
genome : 85,645,029 - 85,709,811 (64,783)
query : 1 - 7,203 (7,203/7,217)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 17.5, cyto 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013308)
HIX0013308
HIT000509546 (
ENST00000411612
)
(Genetic suppressor element 1 isoform 3.)
genome : 85,646,763 - 85,689,478 (42,716)
query : 1 - 872 (872/872)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, mito 7, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013308)
HIX0013308
HIT000106501 (
ENST00000253458
)
(Genetic suppressor element 1;)
genome : 85,646,822 - 85,709,810 (62,989)
query : 1 - 7,495 (7,495/7,495)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 13.5, mito 7, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013308)
HIX0013308
HIT000317135 (
NM_014615
)
(Genetic suppressor element 1;)
genome : 85,646,842 - 85,709,811 (62,970)
query : 1 - 7,476 (7,476/7,490)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 13.5, mito 7, cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013308)
HIX0013308
HIT000725507 (
NM_001278184
)
(Genetic suppressor element 1 isoform 3.)
genome : 85,646,842 - 85,709,811 (62,970)
query : 1 - 7,257 (7,257/7,271)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013308)
HIX0013308
HIT000042319
(
D80004
)
Representative transcript
(Genetic suppressor element 1 isoform 3.)
genome : 85,646,958 - 85,709,810 (62,853)
query : 1 - 7,133 (7,133/7,133)
15 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.997;
0.998;1.000;1.000;1.000;1.000;1.000;1.000;
0.993)3'
coverage = 1.000
InterPro :
IPR022207 : Genetic suppressor element-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013308)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC043094
Gallus
sp. (Chicken) : CR523756
Equus
sp. (Horse) : ENSECAT00000024133
Monodelphis
sp. (Opossum) : ENSMODT00000029862
Oryzias
sp. (Medaka) : ENSORLT00000011968
Pongo
sp. (Orangutan) : ENSPPYT00000008940
Tetraodon
sp. (Tetraodon) : GSTENT00017645001
Danio
sp. (Zebrafish) : NM_001080807
Takifugu
sp. (Fugu) : SINFRUT00000134186
Macaca
sp. (Macaque) : XM_001082386
Rattus
sp. (Rat) : XM_226533
Pan
sp. (Chimpanzee) : XM_511150
Bos
sp. (Cow) : XM_580781
Canis
sp. (Dog) : XM_846706
HIX0013308
HIT000476703 (
ENST00000393243
)
(Genetic suppressor element 1 isoform 3.)
genome : 85,646,958 - 85,709,810 (62,853)
query : 1 - 7,140 (7,140/7,140)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013308)
HIX0013308
HIT000510626 (
ENST00000412692
)
(Genetic suppressor element 1 isoform 2.)
genome : 85,688,380 - 85,709,810 (21,431)
query : 1 - 6,625 (6,625/6,625)
11 exons
identity = 0.999
5'(0.968;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 17, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013308)
HIX0013308
HIT000328904
(
AB208969
)
(Tripartite motif-containing protein 58.)
genome : 85,690,882 - 85,709,810 (18,929)
query : 601 - 6,599 (5,999/6,599)
9 exons
identity = 0.996
5'(0.997;0.998;1.000;1.000;1.000;1.000;1.000;
1.000;0.993)3'
coverage = 0.909
InterPro :
IPR000315 : Zinc finger, B-box
IPR017907 : Zinc finger, RING-type, conserved site
IPR022207 : Genetic suppressor element-like
GO :
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013308)
HIX0013308
HIT000583551 (
ENST00000479488
)
(Genetic suppressor element 1 isoform 2.)
genome : 85,695,096 - 85,696,959 (1,864)
query : 1 - 649 (649/649)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013308)
HIX0013308
HIT000047217
(
AK127344
)
(Genetic suppressor element 1 isoform 2.)
genome : 85,695,897 - 85,709,810 (13,914)
query : 1 - 5,882 (5,882/5,882)
5 exons
identity = 0.996
5'(0.999;1.000;0.996;1.000;0.995)3'
coverage = 1.000
InterPro :
IPR022207 : Genetic suppressor element-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 16, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013308)
HIX0013308
HIT000573904 (
ENST00000469381
)
(Genetic suppressor element 1 isoform 2.)
genome : 85,695,897 - 85,709,810 (13,914)
query : 1 - 5,885 (5,885/5,885)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 16, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013308)
HIX0013308
HIT000427478
(
AK308612
)
(Genetic suppressor element 1 isoform 2.)
genome : 85,696,972 - 85,706,499 (9,528)
query : 1 - 1,734 (1,734/1,734)
7 exons
identity = 0.994
5'(1.000;1.000;1.000;0.996;1.000;0.992;0.984)3'
coverage = 1.000
InterPro :
IPR022207 : Genetic suppressor element-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 18.5, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013308)
HIX0013308
HIT000536114 (
ENST00000438180
)
(Genetic suppressor element 1 isoform 2.)
genome : 85,696,972 - 85,706,499 (9,528)
query : 1 - 1,741 (1,741/1,741)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 18.5, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013308)
HIX0013308
HIT000598564 (
ENST00000495192
)
(Conserved hypothetical protein.)
genome : 85,698,146 - 85,699,610 (1,465)
query : 1 - 618 (618/618)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013308)
HIX0013308
HIT000675843 (
ENST00000562659
)
(Genetic suppressor element 1 isoform 2.)
genome : 85,698,626 - 85,700,228 (1,603)
query : 1 - 756 (756/756)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013308)
HIX0013308
HIT000085866
(
BC000753
)
(Genetic suppressor element 1 isoform 2.)
genome : 85,699,699 - 85,706,960 (7,262)
query : 1 - 1,594 (1,594/1,614)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, extr 1, cyto 1, mito 1, E.R. 1, E.R._mito 1,
cyto_mito 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013308)
HIX0013308
HIT000087394
(
BC009854
)
(Genetic suppressor element 1 isoform 2.)
genome : 85,701,986 - 85,706,960 (4,975)
query : 1 - 1,092 (1,092/1,115)
3 exons
identity = 0.991
5'(1.000;1.000;0.989)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 11.5, cyto_nucl 11.5, nucl 6.5,
extr_plas 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013308)
HIX0013308
HIT000008582
(
AK025308
)
(Conserved hypothetical protein.)
genome : 85,703,059 - 85,705,046 (1,988)
query : 1 - 1,988 (1,988/2,008)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_mito 7, cyto 5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013308)
HIX0013308
HIT000599671 (
ENST00000496345
)
(Genetic suppressor element 1 isoform 2.)
genome : 85,704,234 - 85,706,102 (1,869)
query : 1 - 563 (563/563)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 11, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013308)
HIX0013308
HIT000575518 (
ENST00000471070
)
(Genetic suppressor element 1 isoform 2.)
genome : 85,705,437 - 85,706,254 (818)
query : 1 - 555 (555/555)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, extr 7, cyto 3, mito 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013308)
HIX0013309
HIT000106503 (
ENST00000253462
)
(DNA replication complex GINS protein PSF2; GINS complex subunit 2;)
genome : 85,709,804 - 85,722,605 (12,802)
query : 1 - 2,673 (2,673/2,673)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013309)
HIX0013309
HIT000260407
(
BC062444
)
(DNA replication complex GINS protein PSF2; GINS complex subunit 2;)
genome : 85,711,280 - 85,722,560 (11,281)
query : 3 - 1,154 (1,152/1,183)
5 exons
identity = 0.997
3'(0.994;1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR007257 : DNA replication complex GINS protein Psf2
IPR021151 : GINS complex
GO :
0005634 : Cellular Component : nucleus
0006260 : Biological Process : DNA replication
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013309)
HIX0013309
HIT000031500
(
BC003186
)
Representative transcript
(DNA replication complex GINS protein PSF2; GINS complex subunit 2;)
genome : 85,711,280 - 85,722,588 (11,309)
query : 1 - 1,180 (1,180/1,203)
5 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007257 : DNA replication complex GINS protein Psf2
IPR021151 : GINS complex
GO :
0005634 : Cellular Component : nucleus
0006260 : Biological Process : DNA replication
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013309)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK030758
Danio
sp. (Zebrafish) : BC095711
Tetraodon
sp. (Tetraodon) : CR665286
Bos
sp. (Cow) : ENSBTAT00000013089
Oryzias
sp. (Medaka) : ENSORLT00000011929
Pongo
sp. (Orangutan) : ENSPPYT00000008941
Rattus
sp. (Rat) : ENSRNOT00000023709
Takifugu
sp. (Fugu) : SINFRUT00000134192
Macaca
sp. (Macaque) : XM_001082775
Monodelphis
sp. (Opossum) : XM_001365552
Equus
sp. (Horse) : XM_001502513
Gallus
sp. (Chicken) : XM_414187
Pan
sp. (Chimpanzee) : XM_511151
Canis
sp. (Dog) : XM_846693
HIX0013309
HIT000330903
(
AK223123
)
(DNA replication complex GINS protein PSF2; GINS complex subunit 2;)
genome : 85,711,280 - 85,722,558 (11,279)
query : 1 - 1,150 (1,150/1,172)
5 exons
identity = 0.997
3'(0.995;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007257 : DNA replication complex GINS protein Psf2
IPR021151 : GINS complex
GO :
0005634 : Cellular Component : nucleus
0006260 : Biological Process : DNA replication
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013309)
HIX0013309
HIT000034848
(
BC010164
)
(DNA replication complex GINS protein PSF2; GINS complex subunit 2;)
genome : 85,711,280 - 85,722,562 (11,283)
query : 1 - 1,154 (1,154/1,171)
5 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007257 : DNA replication complex GINS protein Psf2
IPR021151 : GINS complex
GO :
0005634 : Cellular Component : nucleus
0006260 : Biological Process : DNA replication
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013309)
HIX0013309
HIT000205862 (
NM_016095
)
(DNA replication complex GINS protein PSF2; GINS complex subunit 2;)
genome : 85,711,280 - 85,722,588 (11,309)
query : 1 - 1,180 (1,180/1,196)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17, nucl 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013309)
HIX0013309
HIT000002226
(
AF201939
)
(DNA replication complex GINS protein PSF2; GINS complex subunit 2;)
genome : 85,711,280 - 85,722,580 (11,301)
query : 1 - 1,172 (1,172/1,188)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013309)
HIX0013309
HIT000001933
(
AF125098
)
(DNA replication complex GINS protein PSF2; GINS complex subunit 2;)
genome : 85,711,280 - 85,722,580 (11,301)
query : 1 - 1,174 (1,174/1,182)
5 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000;0.988)5'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013309)
HIX0013309
HIT000071693
(
AF151880
)
(DNA replication complex GINS protein PSF2; GINS complex subunit 2;)
genome : 85,711,280 - 85,722,580 (11,301)
query : 1 - 1,172 (1,172/1,174)
5 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR007257 : DNA replication complex GINS protein Psf2
IPR021151 : GINS complex
GO :
0005634 : Cellular Component : nucleus
0006260 : Biological Process : DNA replication
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013309)
HIX0013309
HIT000090691
(
BC022839
)
(DNA replication complex GINS protein PSF2; GINS complex subunit 2;)
genome : 85,711,549 - 85,722,551 (11,003)
query : 1 - 874 (874/891)
5 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007257 : DNA replication complex GINS protein Psf2
IPR021151 : GINS complex
GO :
0005634 : Cellular Component : nucleus
0006260 : Biological Process : DNA replication
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013309)
HIX0013309
HIT000003749
(
AK001275
)
(DNA replication complex GINS protein PSF2; GINS complex subunit 2;)
genome : 85,711,554 - 85,722,540 (10,987)
query : 1 - 858 (858/858)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013309)
HIX0013309
HIT000016386
(
AK091519
)
(DNA replication complex GINS protein PSF2.)
genome : 85,711,582 - 85,722,538 (10,957)
query : 1 - 3,097 (3,097/3,097)
4 exons
identity = 0.995
3'(0.998;0.984;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007257 : DNA replication complex GINS protein Psf2
IPR021151 : GINS complex
GO :
0005634 : Cellular Component : nucleus
0006260 : Biological Process : DNA replication
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 16.5, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013309)
HIX0013309
HIT000268036
(
CR457186
)
(DNA replication complex GINS protein PSF2; GINS complex subunit 2;)
genome : 85,711,819 - 85,722,504 (10,686)
query : 1 - 557 (557/558)
5 exons
identity = 0.996
3'(0.984;1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR007257 : DNA replication complex GINS protein Psf2
IPR021151 : GINS complex
GO :
0005634 : Cellular Component : nucleus
0006260 : Biological Process : DNA replication
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013309)
HIX0013309
HIT000707149 (
ENST00000595355
)
(DNA replication complex GINS protein PSF2.)
genome : 85,712,176 - 85,721,631 (9,456)
query : 1 - 625 (625/625)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 12.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013309)
HIX0013309
HIT000708022 (
ENST00000596233
)
(DNA replication complex GINS protein PSF2.)
genome : 85,712,229 - 85,723,679 (11,451)
query : 1 - 537 (537/537)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 11, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013309)
HIX0202300
HIT000714491 (
ENST00000602758
)
(Conserved hypothetical protein.)
genome : 85,723,690 - 85,784,616 (60,927)
query : 1 - 779 (779/779)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202300)
HIX0202300
HIT000714452 (
ENST00000602719
)
(Uncharacterized protein C16orf74;)
genome : 85,723,776 - 85,784,735 (60,960)
query : 1 - 1,002 (1,002/1,002)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12.5, extr 10, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202300)
HIX0202300
HIT000034166
(
BC009078
)
Representative transcript
(Uncharacterized protein C16orf74;)
genome : 85,741,125 - 85,744,456 (3,332)
query : 1 - 1,235 (1,235/1,261)
2 exons
identity = 0.998
3'(0.998;0.999)5'
coverage = 1.000
InterPro :
IPR027864 : Protein of unknown function DUF4597
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 8, cyto_nucl 2, nucl 1.5, cyto 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202300)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC027666
Equus
sp. (Horse) : ENSECAT00000012060
Pongo
sp. (Orangutan) : ENSPPYT00000008942
Rattus
sp. (Rat) : XM_001078912
Macaca
sp. (Macaque) : XM_001082903
Pan
sp. (Chimpanzee) : XM_001153589
Monodelphis
sp. (Opossum) : XM_001375848
Canis
sp. (Dog) : XM_846683
Bos
sp. (Cow) : XM_872168
HIX0202300
HIT000320237 (
NM_206967
)
(Uncharacterized protein C16orf74;)
genome : 85,741,123 - 85,784,689 (43,567)
query : 1 - 898 (898/899)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 5.5, cyto_nucl 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202300)
HIX0202300
HIT000112462 (
ENST00000284245
)
(Uncharacterized protein C16orf74;)
genome : 85,741,123 - 85,784,697 (43,575)
query : 1 - 906 (906/906)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 5.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202300)
HIX0202300
eHIT000006381 ( ESTsASS_16_604 )
(Non-protein coding transcript.)
genome : 85,741,123 - 85,784,697 (43,575)
query : 1 - 906 (906/906)
4 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202300)
ESTs used for assembly :
BQ672221,AA760709
HIX0202300
HIT000714408 (
ENST00000602675
)
(Uncharacterized protein C16orf74;)
genome : 85,741,123 - 85,784,557 (43,435)
query : 1 - 744 (744/744)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 12.5, cyto 9.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202300)
HIX0202300
HIT000714316 (
ENST00000602583
)
(Uncharacterized protein C16orf74;)
genome : 85,741,123 - 85,744,456 (3,334)
query : 1 - 1,237 (1,237/1,237)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 8, cyto_nucl 2, nucl 1.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202300)
HIX0202300
HIT000714647 (
ENST00000602914
)
(Protein SOGA2; Coiled-coil domain-containing protein 165;)
genome : 85,741,138 - 85,784,711 (43,574)
query : 1 - 761 (761/761)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 14.5, nucl 8.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202300)
HIX0202300
HIT000714499 (
ENST00000602766
)
(Conserved hypothetical protein.)
genome : 85,741,260 - 85,784,718 (43,459)
query : 1 - 832 (832/832)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202300)
HIX0173419
HIT000508269 (
ENST00000410258
)
(Non-protein coding transcript.)
genome : 85,775,227 - 85,775,306 (80)
query : 1 - 80 (80/80)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173419)
HIX0173419
HIT000658642 (
NR_031731
)
(Non-protein coding transcript.)
genome : 85,775,227 - 85,775,306 (80)
query : 1 - 80 (80/80)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173419)
HIX0224016
HIT000714522 (
ENST00000602789
)
(Conserved hypothetical protein.)
genome : 85,776,893 - 85,777,831 (939)
query : 1 - 498 (498/498)
2 exons
identity = 0.992
3'(1.000;0.964)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, nucl 3, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224016)
HIX0013311
HIT000707771 (
ENST00000595980
)
(ER membrane protein complex subunit 8 isoform 1.)
genome : 85,805,364 - 85,814,864 (9,501)
query : 1 - 556 (556/556)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 7.5, cyto 6, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013311)
HIX0013311
HIT000030438
(
BC001472
)
Representative transcript
(ER membrane protein complex subunit 8; Neighbor of COX4; Protein FAM158B;)
genome : 85,812,235 - 85,833,100 (20,866)
query : 1 - 1,909 (1,909/1,941)
5 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005366 : Uncharacterised protein family UPF0172
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013311)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK076710
Danio
sp. (Zebrafish) : BC046080
Rattus
sp. (Rat) : BC089914
Bos
sp. (Cow) : BC110035
Gallus
sp. (Chicken) : BX935865
Tetraodon
sp. (Tetraodon) : CR647826
Equus
sp. (Horse) : ENSECAT00000003745
Oryzias
sp. (Medaka) : ENSORLT00000011918
Pongo
sp. (Orangutan) : ENSPPYT00000008943
Takifugu
sp. (Fugu) : SINFRUT00000134196
Macaca
sp. (Macaque) : XM_001083258
Pan
sp. (Chimpanzee) : XM_001153769
Monodelphis
sp. (Opossum) : XM_001365615
Canis
sp. (Dog) : XM_536760
HIX0013311
HIT000032498
(
BC005886
)
(ER membrane protein complex subunit 8; Neighbor of COX4; Protein FAM158B;)
genome : 85,812,235 - 85,833,100 (20,866)
query : 1 - 1,909 (1,909/1,941)
5 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005366 : Uncharacterised protein family UPF0172
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013311)
HIX0013311
HIT000038778
(
BC020250
)
(ER membrane protein complex subunit 8; Neighbor of COX4; Protein FAM158B;)
genome : 85,812,235 - 85,833,100 (20,866)
query : 1 - 1,909 (1,909/1,941)
5 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005366 : Uncharacterised protein family UPF0172
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013311)
HIX0013311
HIT000033228
(
BC007445
)
(ER membrane protein complex subunit 8; Neighbor of COX4; Protein FAM158B;)
genome : 85,812,239 - 85,833,082 (20,844)
query : 10 - 1,896 (1,887/1,918)
5 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR005366 : Uncharacterised protein family UPF0172
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013311)
HIX0013311
HIT000533134 (
ENST00000435200
)
(ER membrane protein complex subunit 8; Neighbor of COX4; Protein FAM158B;)
genome : 85,812,230 - 85,833,214 (20,985)
query : 1 - 1,935 (1,935/1,935)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013311)
HIX0013311
HIT000202694 (
NM_006067
)
(ER membrane protein complex subunit 8; Neighbor of COX4; Protein FAM158B;)
genome : 85,812,230 - 85,833,148 (20,919)
query : 1 - 1,964 (1,964/1,964)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013311)
HIX0013311
HIT000560500 (
NM_001142288
)
(ER membrane protein complex subunit 8; Neighbor of COX4; Protein FAM158B;)
genome : 85,812,230 - 85,833,148 (20,919)
query : 1 - 1,869 (1,869/1,869)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013311)
HIX0013311
HIT000106500 (
ENST00000253457
)
(ER membrane protein complex subunit 8; Neighbor of COX4; Protein FAM158B;)
genome : 85,812,230 - 85,833,146 (20,917)
query : 1 - 1,962 (1,962/1,962)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013311)
HIX0013311
HIT000061806
(
AF005888
)
(ER membrane protein complex subunit 8; Neighbor of COX4; Protein FAM158B;)
genome : 85,813,004 - 85,833,017 (20,014)
query : 1 - 1,060 (1,060/1,061)
5 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR005366 : Uncharacterised protein family UPF0172
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013311)
HIX0013311
HIT000014053
(
AK057439
)
(ER membrane protein complex subunit 9; Protein FAM158A;)
genome : 85,813,004 - 85,814,829 (1,826)
query : 1 - 1,826 (1,826/1,826)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
InterPro :
IPR005366 : Uncharacterised protein family UPF0172
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 10.5, nucl 9.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013311)
HIX0013311
HIT000709070 (
ENST00000597291
)
(ER membrane protein complex subunit 9; Protein FAM158A;)
genome : 85,813,004 - 85,814,829 (1,826)
query : 1 - 1,826 (1,826/1,826)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 10.5, nucl 9.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013311)
HIX0013311
HIT000712549 (
ENST00000600807
)
(ER membrane protein complex subunit 8 isoform 1.)
genome : 85,813,268 - 85,815,366 (2,099)
query : 1 - 851 (851/851)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cysk 6, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013311)
HIX0013311
HIT000432843
(
AK313977
)
(ER membrane protein complex subunit 8; Neighbor of COX4; Protein FAM158B;)
genome : 85,813,314 - 85,833,130 (19,817)
query : 1 - 862 (862/862)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005366 : Uncharacterised protein family UPF0172
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013311)
HIX0013311
HIT000100052
(
BT007132
)
(ER membrane protein complex subunit 8; Neighbor of COX4; Protein FAM158B;)
genome : 85,813,314 - 85,832,901 (19,588)
query : 1 - 633 (633/633)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005366 : Uncharacterised protein family UPF0172
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013311)
HIX0224013
HIT000714439 (
ENST00000602706
)
(Conserved hypothetical protein.)
genome : 85,817,988 - 85,818,662 (675)
query : 1 - 675 (675/689)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.980
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224013)
HIX0013311
HIT000708635 (
ENST00000596852
)
(ER membrane protein complex subunit 8 isoform 2.)
genome : 85,822,503 - 85,833,002 (10,500)
query : 1 - 486 (486/486)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013311)
HIX0224010
HIT000714350 (
ENST00000602617
)
(Hypothetical short protein.)
genome : 85,826,021 - 85,826,539 (519)
query : 1 - 408 (408/408)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224010)
HIX0013312
HIT000678170 (
ENST00000565078
)
(Conserved hypothetical protein.)
genome : 85,832,239 - 85,838,598 (6,360)
query : 1 - 566 (566/566)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000198792 (
NM_001861
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Precursor;)
genome : 85,833,173 - 85,840,606 (7,434)
query : 1 - 823 (823/839)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.9.3.1
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 25, extr 6.5, extr_plas 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000683033 (
ENST00000570123
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Precursor;)
genome : 85,833,218 - 85,839,348 (6,131)
query : 1 - 551 (551/551)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000053261
(
BC047869
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Fragment;)
genome : 85,833,228 - 85,840,606 (7,379)
query : 1 - 2,269 (2,269/2,321)
3 exons
identity = 0.994
5'(1.000;1.000;0.994)3'
coverage = 1.000
InterPro :
IPR004203 : Cytochrome c oxidase subunit IV family
GO :
0004129 : Molecular Function : cytochrome-c oxidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000681323 (
ENST00000568339
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Fragment;)
genome : 85,833,228 - 85,840,608 (7,381)
query : 1 - 2,271 (2,271/2,271)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000679163 (
ENST00000566115
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Fragment;)
genome : 85,833,244 - 85,838,702 (5,459)
query : 1 - 471 (471/471)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11.5, extr 10, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000680257 (
ENST00000567241
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Fragment;)
genome : 85,833,260 - 85,838,934 (5,675)
query : 1 - 561 (561/561)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000681758 (
ENST00000568794
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Precursor;)
genome : 85,833,289 - 85,840,411 (7,123)
query : 1 - 794 (794/794)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, extr 6, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000222217
(
U90915
)
Representative transcript
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Precursor;)
genome : 85,833,290 - 85,840,606 (7,317)
query : 1 - 706 (706/722)
5 exons
identity = 0.999
5'(1.000;1.000;0.994;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004203 : Cytochrome c oxidase subunit IV family
IPR013288 : Cytochrome c oxidase subunit IV
GO :
0004129 : Molecular Function : cytochrome-c oxidase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 25, extr 6.5, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB170239
Mus
sp. (Mouse) : AK012583
Danio
sp. (Zebrafish) : BC059669
Danio
sp. (Zebrafish) : BC095163
Gallus
sp. (Chicken) : BX930028
Tetraodon
sp. (Tetraodon) : CR715449
Bos
sp. (Cow) : ENSBTAT00000021397
Oryzias
sp. (Medaka) : ENSORLT00000011893
Pongo
sp. (Orangutan) : ENSPPYT00000008944
Takifugu
sp. (Fugu) : SINFRUT00000134199
Rattus
sp. (Rat) : X14209
Pan
sp. (Chimpanzee) : XM_001154548
Monodelphis
sp. (Opossum) : XM_001365680
Equus
sp. (Horse) : XM_001502557
Canis
sp. (Dog) : XM_536759
HIX0013312
HIT000106499 (
ENST00000253452
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Precursor;)
genome : 85,833,290 - 85,840,608 (7,319)
query : 1 - 708 (708/708)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 25, extr 6.5, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000260400
(
BC062437
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Precursor;)
genome : 85,833,298 - 85,840,603 (7,306)
query : 5 - 699 (695/730)
5 exons
identity = 0.997
5'(1.000;0.986;0.994;1.000;1.000)3'
coverage = 0.991
InterPro :
IPR004203 : Cytochrome c oxidase subunit IV family
IPR013288 : Cytochrome c oxidase subunit IV
GO :
0004129 : Molecular Function : cytochrome-c oxidase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 26, extr 4.5, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000321917
(
X54802
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Precursor;)
genome : 85,833,298 - 85,840,605 (7,308)
query : 1 - 696 (696/696)
5 exons
identity = 0.997
5'(1.000;1.000;0.994;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR004203 : Cytochrome c oxidase subunit IV family
IPR013288 : Cytochrome c oxidase subunit IV
GO :
0004129 : Molecular Function : cytochrome-c oxidase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 25, extr 6.5, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000675540 (
ENST00000562336
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Precursor;)
genome : 85,833,299 - 85,840,650 (7,352)
query : 1 - 873 (873/873)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, extr 11.5, extr_plas 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000430713
(
AK311847
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Precursor;)
genome : 85,833,301 - 85,840,480 (7,180)
query : 1 - 569 (569/569)
5 exons
identity = 0.998
5'(1.000;1.000;0.994;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004203 : Cytochrome c oxidase subunit IV family
IPR013288 : Cytochrome c oxidase subunit IV
GO :
0004129 : Molecular Function : cytochrome-c oxidase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 25, extr 6.5, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000676916 (
ENST00000563774
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Precursor;)
genome : 85,833,302 - 85,838,956 (5,655)
query : 1 - 566 (566/566)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000674789 (
ENST00000561569
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Precursor;)
genome : 85,833,303 - 85,840,608 (7,306)
query : 1 - 716 (716/716)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 25, extr 6.5, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000680281 (
ENST00000567266
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Fragment;)
genome : 85,833,303 - 85,839,032 (5,730)
query : 1 - 546 (546/546)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, extr 8, nucl 7.5, cyto_nucl 5.5,
E.R._mito 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000679442 (
ENST00000566405
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Fragment;)
genome : 85,833,304 - 85,840,408 (7,105)
query : 1 - 490 (490/490)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, mito 7.5, E.R._mito 6.5, E.R. 4.5, nucl 4,
extr_plas 3, plas 2.5, extr 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000095460
(
BC039013
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Fragment;)
genome : 85,833,314 - 85,840,606 (7,293)
query : 1 - 2,183 (2,183/2,219)
3 exons
identity = 0.994
5'(1.000;1.000;0.993)3'
coverage = 1.000
InterPro :
IPR004203 : Cytochrome c oxidase subunit IV family
GO :
0004129 : Molecular Function : cytochrome-c oxidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000677660 (
ENST00000564544
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Precursor;)
genome : 85,833,314 - 85,840,581 (7,268)
query : 1 - 617 (617/617)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000033910
(
BC008704
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Precursor;)
genome : 85,833,315 - 85,840,606 (7,292)
query : 1 - 681 (681/718)
5 exons
identity = 0.999
5'(1.000;1.000;0.994;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004203 : Cytochrome c oxidase subunit IV family
IPR013288 : Cytochrome c oxidase subunit IV
GO :
0004129 : Molecular Function : cytochrome-c oxidase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 25, extr 6.5, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000039162
(
BC021236
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Precursor;)
genome : 85,833,322 - 85,840,606 (7,285)
query : 1 - 674 (674/717)
5 exons
identity = 0.999
5'(1.000;1.000;0.994;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004203 : Cytochrome c oxidase subunit IV family
IPR013288 : Cytochrome c oxidase subunit IV
GO :
0004129 : Molecular Function : cytochrome-c oxidase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 25, extr 6.5, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000679650 (
ENST00000566617
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Precursor;)
genome : 85,833,366 - 85,838,915 (5,550)
query : 1 - 572 (572/572)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000194796
(
M21575
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Precursor;)
genome : 85,834,808 - 85,840,605 (5,798)
query : 31 - 669 (639/669)
4 exons
identity = 0.998
5'(1.000;0.994;1.000;1.000)3'
coverage = 0.955
EC number :
EC 1.9.3.1
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
InterPro :
IPR004203 : Cytochrome c oxidase subunit IV family
IPR013288 : Cytochrome c oxidase subunit IV
GO :
0004129 : Molecular Function : cytochrome-c oxidase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 25, extr 6.5, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000678002 (
ENST00000564903
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Fragment;)
genome : 85,834,808 - 85,840,574 (5,767)
query : 1 - 1,481 (1,481/1,481)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 25, extr 6.5, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000677760 (
ENST00000564648
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Precursor;)
genome : 85,834,808 - 85,840,573 (5,766)
query : 1 - 1,235 (1,235/1,235)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000195605
(
M34600
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Precursor;)
genome : 85,834,812 - 85,840,605 (5,794)
query : 1 - 634 (634/634)
4 exons
identity = 0.997
5'(1.000;0.994;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR004203 : Cytochrome c oxidase subunit IV family
IPR013288 : Cytochrome c oxidase subunit IV
GO :
0004129 : Molecular Function : cytochrome-c oxidase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 25, extr 6.5, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000266676
(
BT019825
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Precursor;)
genome : 85,834,812 - 85,840,478 (5,667)
query : 1 - 508 (508/510)
4 exons
identity = 0.998
5'(1.000;0.994;1.000;1.000)3'
coverage = 0.996
InterPro :
IPR004203 : Cytochrome c oxidase subunit IV family
IPR013288 : Cytochrome c oxidase subunit IV
GO :
0004129 : Molecular Function : cytochrome-c oxidase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 25, extr 6.5, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000010410
(
AK027136
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Fragment;)
genome : 85,836,663 - 85,840,606 (3,944)
query : 1 - 3,946 (3,946/4,011)
1 exon
identity = 0.991
5'(0.991)3'
coverage = 1.000
InterPro :
IPR004203 : Cytochrome c oxidase subunit IV family
IPR013288 : Cytochrome c oxidase subunit IV
GO :
0004129 : Molecular Function : cytochrome-c oxidase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13, extr 10, mito 4, E.R._mito 3.5, plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000682916 (
ENST00000569997
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Fragment;)
genome : 85,836,663 - 85,840,608 (3,946)
query : 1 - 3,946 (3,946/3,946)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 2, cyto 2, mito 2, cyto_nucl 2,
cyto_mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0013312
HIT000676102 (
ENST00000562929
)
(Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; Cytochrome c oxidase polypeptide IV; Cytochrome c oxidase subunit IV isoform 1; COX IV-1; Fragment;)
genome : 85,838,675 - 85,840,637 (1,963)
query : 1 - 452 (452/452)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, cyto_mito 10.5, mito 6.5, extr 4, pero 3,
nucl 2, E.R. 2, extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013312)
HIX0135315
HIT000587960 (
ENST00000484096
)
(Ribosomal protein L1/ribosomal biogenesis protein family protein.)
genome : 85,849,479 - 85,850,142 (664)
query : 1 - 664 (664/664)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, extr 6, mito 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0135315)
HIX0135315
pHIT000027779 ( pHIT000027779 )
Representative transcript
(Conserved hypothetical protein.)
genome : 85,849,861 - 85,850,142 (282)
query : 1 - 282 (282/282)
1 exon
InterPro :
IPR016094 : Ribosomal protein L1, 2-layer alpha/beta-sandwich
IPR016095 : Ribosomal protein L1, 3-layer alpha/beta-sandwich
IPR023674 : Ribosomal protein L1-like
IPR028364 : Ribosomal protein L1/ribosomal biogenesis protein
GO :
0003723 : Molecular Function : RNA binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0135315)
CAGE tag :
H05BA78A1807
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XR_020961
HIX0027041
HIT000047057
(
AK127184
)
Representative transcript
(Activating molecule in BECN1-regulated autophagy protein 1 isoform 1.)
genome : 85,893,127 - 85,895,618 (2,492)
query : 1 - 2,491 (2,491/2,491)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 11, cyto_pero 2.83333,
cyto_nucl 2.66667, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027041)
HIX0223155
pHIT000027780 ( pHIT000027780 )
Representative transcript
(Conserved hypothetical protein.)
genome : 85,932,367 - 85,954,888 (22,522)
query : 1 - 2,031 (2,031/2,031)
11 exons
InterPro :
IPR001346 : Interferon regulatory factor DNA-binding domain
IPR008984 : SMAD/FHA domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR017855 : SMAD domain-like
IPR019471 : Interferon regulatory factor-3
IPR019817 : Interferon regulatory factor, conserved site
GO :
0000975 : Molecular Function : regulatory region DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005515 : Molecular Function : protein binding
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223155)
CAGE tag :
H10BA50J2205
HIX0223155
HIT000678625 (
ENST00000565552
)
(Interferon regulatory factor DNA-binding domain containing protein.)
genome : 85,932,769 - 85,936,762 (3,994)
query : 1 - 522 (522/522)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 12, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223155)
HIX0223155
HIT000683001 (
ENST00000570088
)
(Interferon regulatory factor DNA-binding domain containing protein.)
genome : 85,932,794 - 85,937,137 (4,344)
query : 1 - 553 (553/553)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 9.5, nucl 8, cyto 7, mito_pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223155)
HIX0223155
HIT000676343 (
ENST00000563180
)
(Interferon regulatory factor DNA-binding domain containing protein.)
genome : 85,936,295 - 85,943,488 (7,194)
query : 1 - 1,394 (1,394/1,394)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223155)
HIX0223155
HIT000677731 (
ENST00000564617
)
(Interferon regulatory factor DNA-binding domain containing protein.)
genome : 85,936,421 - 85,946,766 (10,346)
query : 1 - 531 (531/531)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223155)
HIX0223155
HIT000677191 (
ENST00000564056
)
(Interferon regulatory factor DNA-binding domain containing protein.)
genome : 85,936,737 - 85,946,918 (10,182)
query : 1 - 514 (514/514)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223155)
HIX0223155
HIT000682093 (
ENST00000569145
)
(Non-protein coding transcript.)
genome : 85,947,580 - 85,952,095 (4,516)
query : 1 - 289 (289/289)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223155)
HIX0223155
HIT000675688 (
ENST00000562492
)
(Interferon regulatory factor-3 domain containing protein.)
genome : 85,947,649 - 85,954,977 (7,329)
query : 1 - 946 (946/946)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 8.33333, cyto 7.5, nucl 7,
cyto_pero 4.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223155)
HIX0223155
HIT000682545 (
ENST00000569607
)
(Interferon regulatory factor-3 domain containing protein.)
genome : 85,947,919 - 85,954,880 (6,962)
query : 1 - 880 (880/880)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 8.83333, cyto 8.5, nucl 7,
cyto_pero 5.16667, mito_nucl 5.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223155)
HIX0224001
HIT000710696 (
ENST00000598933
)
(Conserved hypothetical protein.)
genome : 85,968,887 - 85,969,829 (943)
query : 1 - 750 (750/750)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 6.5, cyto 6, nucl 5.5,
cyto_pero 5.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224001)
HIX0194715
pHIT000027781 ( pHIT000027781 )
Representative transcript
(Conserved hypothetical protein.)
genome : 86,003,038 - 86,007,737 (4,700)
query : 1 - 1,542 (1,542/1,542)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194715)
CAGE tag :
H10BA50J2205
HIX0224002
HIT000711166 (
ENST00000599411
)
(Conserved hypothetical protein.)
genome : 86,015,356 - 86,018,329 (2,974)
query : 1 - 474 (474/474)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224002)
HIX0038558
HIT000078721
(
AF384996
)
Representative transcript
(Conserved hypothetical protein.)
genome : 86,069,233 - 86,070,025 (793)
query : 1 - 791 (791/791)
1 exon
identity = 0.991
5'(0.991)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, cyto_nucl 3.83333, nucl 3.5, cyto 3, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038558)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000008946
Pan
sp. (Chimpanzee) : ENSPTRT00000015547
HIX0038919
HIT000306094
(
CR627169
)
Representative transcript
(Conserved hypothetical protein.)
genome : 86,115,015 - 86,123,130 (8,116)
query : 3 - 7,424 (7,422/7,442)
2 exons
identity = 0.990
3'(0.991;0.982)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038919)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : XM_001084353
HIX0038919
HIT000677069 (
ENST00000563931
)
(Conserved hypothetical protein.)
genome : 86,115,015 - 86,123,132 (8,118)
query : 1 - 7,430 (7,430/7,430)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 9, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038919)
HIX0224004
HIT000711979 (
ENST00000600234
)
(Conserved hypothetical protein.)
genome : 86,191,812 - 86,192,404 (593)
query : 1 - 479 (479/479)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 5, cyto_nucl 4.33333, cyto_pero 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224004)
HIX0224003
HIT000711591 (
ENST00000599841
)
(Conserved hypothetical protein.)
genome : 86,226,399 - 86,232,519 (6,121)
query : 1 - 4,039 (4,039/4,039)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 11.5, cyto_nucl 8.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224003)
HIX0224005
HIT000712990 (
ENST00000601250
)
(Hypothetical short protein.)
genome : 86,229,787 - 86,233,326 (3,540)
query : 1 - 441 (441/441)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224005)
HIX0224009
HIT000714158 (
ENST00000602425
)
(Conserved hypothetical protein.)
genome : 86,255,029 - 86,256,335 (1,307)
query : 1 - 564 (564/564)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 12, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224009)
HIX0224000
HIT000709152 (
ENST00000597373
)
(Hypothetical short protein.)
genome : 86,259,186 - 86,309,351 (50,166)
query : 1 - 465 (465/465)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9.5, cyto_nucl 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224000)
HIX0038855
HIT000097540
(
BC043214
)
Representative transcript
(Hypothetical protein.)
genome : 86,320,033 - 86,326,994 (6,962)
query : 1 - 2,064 (2,064/2,123)
3 exons
identity = 1.000
5'(0.992;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038855)
HIX0038855
HIT000711241 (
ENST00000599486
)
(Conserved hypothetical protein.)
genome : 86,320,033 - 86,326,995 (6,963)
query : 1 - 2,065 (2,065/2,065)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038855)
HIX0038855
HIT000660370 (
NR_038438
)
(Hypothetical protein.)
genome : 86,320,037 - 86,326,994 (6,958)
query : 1 - 2,060 (2,060/2,102)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038855)
HIX0019645
HIT000025850
(
AL137562
)
(Conserved hypothetical protein.)
genome : 86,365,452 - 86,371,162 (5,711)
query : 1 - 1,530 (1,530/1,577)
5 exons
identity = 0.997
3'(0.998;0.988;1.000;0.995;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 14.5, nucl 12.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019645)
HIX0019645
HIT000097571
(
BC043250
)
(Conserved hypothetical protein.)
genome : 86,365,454 - 86,379,250 (13,797)
query : 4 - 2,677 (2,674/2,693)
6 exons
identity = 0.994
3'(0.996;1.000;0.995;0.996;1.000;0.954)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11.5, nucl 8.5, extr 7, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019645)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001155161
HIX0019645
HIT000706010 (
ENST00000594203
)
(Conserved hypothetical protein.)
genome : 86,365,450 - 86,379,250 (13,801)
query : 1 - 2,678 (2,678/2,678)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, cyto 10.5, nucl 8.5, extr 8, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019645)
HIX0019645
HIT000712634 (
ENST00000600892
)
(Conserved hypothetical protein.)
genome : 86,365,450 - 86,371,162 (5,713)
query : 1 - 1,532 (1,532/1,532)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 14.5, nucl 12.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019645)
HIX0019645
HIT000018111
(
AK093244
)
Representative transcript
(Proline, histidine and glycine-rich protein 1.)
genome : 86,365,456 - 86,379,285 (13,830)
query : 1 - 2,618 (2,618/2,618)
7 exons
identity = 0.995
3'(0.994;1.000;1.000;1.000;0.999;0.988;0.968)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 12.5, extr 8, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019645)
HIX0019645
HIT000562586 (
NR_024406
)
(Proline, histidine and glycine-rich protein 1.)
genome : 86,365,456 - 86,379,285 (13,830)
query : 1 - 2,618 (2,618/2,618)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 12.5, extr 8, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019645)
HIX0019645
HIT000713293 (
ENST00000601556
)
(Proline, histidine and glycine-rich protein 1.)
genome : 86,365,456 - 86,379,285 (13,830)
query : 1 - 2,618 (2,618/2,618)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 12.5, extr 8, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019645)
HIX0019645
HIT000502464
(
BC144028
)
(Conserved hypothetical protein.)
genome : 86,366,590 - 86,371,789 (5,200)
query : 1 - 984 (984/984)
4 exons
identity = 0.997
3'(0.984;1.000;1.000;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 10, extr 8, mito 6, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019645)
HIX0019645
HIT000116746 (
ENST00000304488
)
(Proline, histidine and glycine-rich protein 1;)
genome : 86,369,374 - 86,379,285 (9,912)
query : 1 - 1,588 (1,588/1,588)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 12.5, extr 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019645)
HIX0019645
HIT000706966 (
ENST00000595169
)
(Conserved hypothetical protein.)
genome : 86,371,601 - 86,383,245 (11,645)
query : 1 - 839 (839/839)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 13, extr 9, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019645)
HIX0019645
HIT000711372 (
ENST00000599619
)
(Conserved hypothetical protein.)
genome : 86,371,740 - 86,383,289 (11,550)
query : 1 - 720 (720/720)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 13, extr 9, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019645)
HIX0019645
HIT000711416 (
ENST00000599664
)
(Conserved hypothetical protein.)
genome : 86,371,855 - 86,383,289 (11,435)
query : 1 - 767 (767/767)
4 exons
identity = 0.995
3'(1.000;1.000;0.972;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 9.5, cyto_nucl 9, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019645)
HIX0019645
HIT000710757 (
ENST00000598994
)
(Hypothetical short protein.)
genome : 86,372,056 - 86,383,286 (11,231)
query : 1 - 556 (556/556)
4 exons
identity = 0.993
3'(1.000;1.000;0.970;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019645)
HIX0223998
HIT000707496 (
ENST00000595705
)
(Hypothetical short protein.)
genome : 86,380,993 - 86,383,217 (2,225)
query : 1 - 901 (901/901)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 8, cyto 2.5, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223998)
HIX0223999
HIT000708400 (
ENST00000596612
)
(Glutathione S-transferase, C-terminal-like domain containing protein.)
genome : 86,468,436 - 86,469,490 (1,055)
query : 1 - 744 (744/744)
2 exons
identity = 0.996
3'(1.000;0.962)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 7, cyto_nucl 7, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223999)
HIX0013313
HIT000659082 (
NR_033925
)
(Conserved hypothetical protein.)
genome : 86,508,131 - 86,542,466 (34,336)
query : 1 - 3,099 (3,099/3,099)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cysk 7, cyto 6.5, cyto_nucl 5, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013313)
HIX0013313
HIT000016701
(
AK091834
)
Representative transcript
(Conserved hypothetical protein.)
genome : 86,508,135 - 86,542,466 (34,332)
query : 1 - 3,093 (3,093/3,093)
4 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cysk 7, cyto 6.5, cyto_nucl 5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013313)
HIX0013313
HIT000707677 (
ENST00000595886
)
(Conserved hypothetical protein.)
genome : 86,508,135 - 86,542,466 (34,332)
query : 1 - 3,095 (3,095/3,095)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cysk 7, cyto 6.5, cyto_nucl 5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013313)
HIX0013313
HIT000712296 (
ENST00000600553
)
(Conserved hypothetical protein.)
genome : 86,510,730 - 86,524,121 (13,392)
query : 28 - 355 (328/355)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.924
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 9.5, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013313)
HIX0013313
HIT000659548 (
NR_036444
)
(Hypothetical protein.)
genome : 86,521,276 - 86,542,466 (21,191)
query : 1 - 2,671 (2,671/2,693)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15, extr 8, nucl 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013313)
HIX0013313
HIT000028652
(
AL833740
)
(Conserved hypothetical protein.)
genome : 86,521,312 - 86,523,529 (2,218)
query : 1 - 2,218 (2,218/2,237)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15, extr 8, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013313)
HIX0013313
HIT000054894
(
BX538111
)
(Conserved hypothetical protein.)
genome : 86,521,322 - 86,524,121 (2,800)
query : 26 - 2,825 (2,800/2,846)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15, extr 8, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013313)
HIX0038747
HIT000022167
(
AK097312
)
Representative transcript
(Hypothetical protein.)
genome : 86,521,314 - 86,523,857 (2,544)
query : 1 - 2,544 (2,544/2,544)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, cyto 9, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038747)
HIX0038747
HIT000710759 (
ENST00000598996
)
(Hypothetical protein.)
genome : 86,521,322 - 86,524,121 (2,800)
query : 1 - 2,800 (2,800/2,825)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.991
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, cyto 9, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038747)
HIX0013313
HIT000711501 (
ENST00000599749
)
(Conserved hypothetical protein.)
genome : 86,521,343 - 86,542,705 (21,363)
query : 1 - 2,843 (2,843/2,843)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15, extr 8, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013313)
HIX0013313
HIT000709356 (
ENST00000597578
)
(Conserved hypothetical protein.)
genome : 86,523,789 - 86,542,482 (18,694)
query : 1 - 553 (553/553)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013313)
HIX0013313
HIT000706204 (
ENST00000594398
)
(Conserved hypothetical protein.)
genome : 86,523,832 - 86,532,191 (8,360)
query : 1 - 602 (602/602)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, extr 11, cyto_nucl 9.5, nucl 5.5,
extr_plas 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013313)
HIX0013313
HIT000705415 (
ENST00000593604
)
(Conserved hypothetical protein.)
genome : 86,523,874 - 86,542,483 (18,610)
query : 1 - 960 (960/960)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 9, nucl 3, mito 2, pero 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013313)
HIX0038584
HIT000198427 (
NM_001451
)
(Forkhead box protein F1; Forkhead-related activator 1; FREAC-1; Forkhead-related protein FKHL5; Forkhead-related transcription factor 1;)
genome : 86,544,133 - 86,548,070 (3,938)
query : 1 - 2,562 (2,562/2,579)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038584)
HIX0038584
HIT000108400 (
ENST00000262426
)
(Forkhead box protein F1; Forkhead-related activator 1; FREAC-1; Forkhead-related protein FKHL5; Forkhead-related transcription factor 1;)
genome : 86,544,133 - 86,548,076 (3,944)
query : 1 - 2,568 (2,568/2,568)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038584)
HIX0038584
HIT000433033
(
AK314167
)
(Forkhead box protein F2; Protein LUN;)
genome : 86,544,133 - 86,546,691 (2,559)
query : 1 - 1,190 (1,190/1,190)
2 exons
identity = 0.994
5'(0.993;1.000)3'
coverage = 1.000
InterPro :
IPR001766 : Transcription factor, fork head
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR018122 : Fork head domain conserved site1
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038584)
HIX0038584
HIT000266285
(
BC089442
)
(Forkhead box protein F1; Forkhead-related activator 1; FREAC-1; Forkhead-related protein FKHL5; Forkhead-related transcription factor 1;)
genome : 86,544,144 - 86,547,983 (3,840)
query : 1 - 2,465 (2,465/2,483)
2 exons
identity = 1.000
5'(1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001766 : Transcription factor, fork head
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR018122 : Fork head domain conserved site1
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038584)
HIX0038584
HIT000218133
(
U13219
)
Representative transcript
(Forkhead box protein F1; Forkhead-related activator 1; FREAC-1; Forkhead-related protein FKHL5; Forkhead-related transcription factor 1;)
genome : 86,544,158 - 86,548,047 (3,890)
query : 1 - 2,510 (2,510/2,510)
2 exons
identity = 0.995
5'(1.000;0.992)3'
coverage = 1.000
InterPro :
IPR001766 : Transcription factor, fork head
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR018122 : Fork head domain conserved site1
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038584)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AB028627
Danio
sp. (Zebrafish) : BC129194
Equus
sp. (Horse) : ENSECAT00000021303
Pongo
sp. (Orangutan) : ENSPPYT00000008948
Oryzias
sp. (Medaka) : FJ792660
Tetraodon
sp. (Tetraodon) : GSTENT00017651001
Mus
sp. (Mouse) : NM_010426
Takifugu
sp. (Fugu) : SINFRUT00000134208
Macaca
sp. (Macaque) : XM_001084773
Monodelphis
sp. (Opossum) : XM_001365795
Pan
sp. (Chimpanzee) : XM_523449
Canis
sp. (Dog) : XM_546792
Bos
sp. (Cow) : XM_603148
HIX0038584
HIT000251640
(
AY312577
)
(Forkhead box protein F1; Forkhead-related protein FKHL5; Forkhead-related transcription factor 1; FREAC-1; Hepatocyte nuclear factor 3 forkhead homolog 8; HFH-8;)
genome : 86,545,019 - 86,546,791 (1,773)
query : 1 - 152 (152/152)
2 exons
identity = 0.981
5'(1.000;0.970)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038584)
HIX0194413
pHIT000027787 ( pHIT000027787 )
Representative transcript
(Hypothetical protein.)
genome : 86,547,236 - 86,552,900 (5,665)
query : 1 - 726 (726/726)
4 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194413)
CAGE tag :
H10BA43L0606
HIX0194413
pHIT000089946 ( pHIT000089946 )
(Hypothetical protein.)
genome : 86,549,621 - 86,552,900 (3,280)
query : 1 - 534 (534/534)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194413)
CAGE tag :
H05BA95L2206
HIX0224014
HIT000714472 (
ENST00000602739
)
(Hypothetical protein.)
genome : 86,553,989 - 86,557,503 (3,515)
query : 1 - 3,515 (3,515/3,515)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 12.5, cyto_nucl 9.33333, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224014)
HIX0194716
pHIT000027788 ( pHIT000027788 )
Representative transcript
(Conserved hypothetical protein.)
genome : 86,557,839 - 86,561,457 (3,619)
query : 1 - 222 (222/222)
3 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194716)
CAGE tag :
H10BA43L0606
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : XR_010121
Pan
sp. (Chimpanzee) : XR_021803
HIX0194716
HIT000578222 (
ENST00000473913
)
(Ribosomal protein L7Ae/L8/Nhp2 family protein.)
genome : 86,559,063 - 86,559,858 (796)
query : 1 - 796 (796/796)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194716)
HIX0013314
HIT000208847 (
NM_022764
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 3.)
genome : 86,563,782 - 86,588,841 (25,060)
query : 1 - 3,035 (3,035/3,059)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 12.5, cyto_mito 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000561746 (
NM_001159377
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 1.)
genome : 86,563,782 - 86,588,841 (25,060)
query : 1 - 3,038 (3,038/3,038)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 12.5, cyto_mito 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000561747 (
NM_001159378
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 2.)
genome : 86,563,782 - 86,588,841 (25,060)
query : 1 - 3,038 (3,038/3,038)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 12.5, cyto_mito 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000561748 (
NM_001159379
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 4.)
genome : 86,563,782 - 86,588,841 (25,060)
query : 1 - 3,035 (3,035/3,035)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 12.5, cyto_mito 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000563538 (
NR_027489
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 5.)
genome : 86,563,782 - 86,588,841 (25,060)
query : 1 - 3,108 (3,108/3,108)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.940)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 12.5, nucl 11.5, mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000563539 (
NR_027490
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 5.)
genome : 86,563,782 - 86,588,841 (25,060)
query : 1 - 3,098 (3,098/3,098)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 12.5, nucl 11.5, mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000314205 (
ENST00000360900
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 1.)
genome : 86,563,782 - 86,588,816 (25,035)
query : 1 - 3,013 (3,013/3,013)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 12.5, cyto_mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000561749 (
NM_001159380
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 5.)
genome : 86,563,782 - 86,588,809 (25,028)
query : 1 - 3,002 (3,002/3,002)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.943)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16.1667, nucl 11.5,
cyto_mito 9.83333, cyto_plas 9.83333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000123314 (
ENST00000322911
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 3.)
genome : 86,563,783 - 86,588,841 (25,059)
query : 1 - 3,034 (3,034/3,034)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 12.5, cyto_mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000044888
(
AK125015
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 5.)
genome : 86,563,784 - 86,567,406 (3,623)
query : 1 - 3,624 (3,624/3,624)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, cyto 8, extr 4, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000681362 (
ENST00000568381
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 5.)
genome : 86,563,784 - 86,567,406 (3,623)
query : 1 - 3,623 (3,623/3,623)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, cyto 8, extr 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000021691
(
AK096836
)
Representative transcript
(Methenyltetrahydrofolate synthase domain-containing protein isoform 5.)
genome : 86,564,439 - 86,588,841 (24,403)
query : 1 - 2,452 (2,452/2,452)
9 exons
identity = 0.998
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.940)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR024185 : 5-formyltetrahydrofolate cyclo-ligase-like domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 12.5, nucl 11.5, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000645138 (
ENST00000546093
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 5.)
genome : 86,564,439 - 86,588,841 (24,403)
query : 1 - 2,451 (2,451/2,451)
9 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.940)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 12.5, nucl 11.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000006334
(
AK023060
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 3.)
genome : 86,564,487 - 86,588,816 (24,330)
query : 1 - 2,308 (2,308/2,308)
8 exons
identity = 0.998
3'(0.998;1.000;1.000;0.989;1.000;0.991;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR002698 : 5-formyltetrahydrofolate cyclo-ligase
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR024185 : 5-formyltetrahydrofolate cyclo-ligase-like domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0005524 : Molecular Function : ATP binding
0009396 : Biological Process : folic acid-containing compound biosynthetic process
0030272 : Molecular Function : 5-formyltetrahydrofolate cyclo-ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 12.5, cyto_mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC023782
Bos
sp. (Cow) : BC112796
Danio
sp. (Zebrafish) : BC122258
Gallus
sp. (Chicken) : BX929361
Pongo
sp. (Orangutan) : CR857540
Oryzias
sp. (Medaka) : ENSORLT00000011868
Tetraodon
sp. (Tetraodon) : GSTENT00017652001
Takifugu
sp. (Fugu) : SINFRUT00000134210
Macaca
sp. (Macaque) : XM_001085714
Pan
sp. (Chimpanzee) : XM_001156018
Monodelphis
sp. (Opossum) : XM_001376195
Equus
sp. (Horse) : XM_001500142
Canis
sp. (Dog) : XM_846544
HIX0013314
HIT000007229
(
AK023955
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 1.)
genome : 86,564,750 - 86,588,798 (24,049)
query : 1 - 2,023 (2,023/2,023)
8 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR002698 : 5-formyltetrahydrofolate cyclo-ligase
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR024185 : 5-formyltetrahydrofolate cyclo-ligase-like domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0005524 : Molecular Function : ATP binding
0009396 : Biological Process : folic acid-containing compound biosynthetic process
0030272 : Molecular Function : 5-formyltetrahydrofolate cyclo-ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 12.5, cyto_mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000441592
(
DQ575061
)
(Non-protein coding transcript.)
genome : 86,565,359 - 86,565,388 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000340186
(
BC112057
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 3.)
genome : 86,565,578 - 86,588,809 (23,232)
query : 13 - 1,222 (1,210/1,222)
8 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.990
InterPro :
IPR000504 : RNA recognition motif domain
IPR002698 : 5-formyltetrahydrofolate cyclo-ligase
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR024185 : 5-formyltetrahydrofolate cyclo-ligase-like domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0005524 : Molecular Function : ATP binding
0009396 : Biological Process : folic acid-containing compound biosynthetic process
0030272 : Molecular Function : 5-formyltetrahydrofolate cyclo-ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 12.5, cyto_mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000340188
(
BC112059
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 3.)
genome : 86,565,578 - 86,588,809 (23,232)
query : 13 - 1,222 (1,210/1,222)
8 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.990
InterPro :
IPR000504 : RNA recognition motif domain
IPR002698 : 5-formyltetrahydrofolate cyclo-ligase
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR024185 : 5-formyltetrahydrofolate cyclo-ligase-like domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0005524 : Molecular Function : ATP binding
0009396 : Biological Process : folic acid-containing compound biosynthetic process
0030272 : Molecular Function : 5-formyltetrahydrofolate cyclo-ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 12.5, cyto_mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000362492 (
ENST00000381214
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 2.)
genome : 86,565,578 - 86,588,809 (23,232)
query : 1 - 1,210 (1,210/1,210)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 12.5, cyto_mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000502146
(
BC143702
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 2.)
genome : 86,565,578 - 86,588,809 (23,232)
query : 1 - 1,207 (1,207/1,207)
8 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR002698 : 5-formyltetrahydrofolate cyclo-ligase
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR024185 : 5-formyltetrahydrofolate cyclo-ligase-like domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0005524 : Molecular Function : ATP binding
0009396 : Biological Process : folic acid-containing compound biosynthetic process
0030272 : Molecular Function : 5-formyltetrahydrofolate cyclo-ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 12.5, cyto_mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000502147
(
BC143703
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 1.)
genome : 86,565,578 - 86,588,809 (23,232)
query : 1 - 1,270 (1,270/1,270)
8 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 8, nucl 6, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000502148
(
BC143704
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 3.)
genome : 86,565,578 - 86,588,809 (23,232)
query : 1 - 1,207 (1,207/1,207)
8 exons
identity = 0.996
3'(0.994;1.000;0.991;0.989;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR002698 : 5-formyltetrahydrofolate cyclo-ligase
IPR024185 : 5-formyltetrahydrofolate cyclo-ligase-like domain
GO :
0005524 : Molecular Function : ATP binding
0009396 : Biological Process : folic acid-containing compound biosynthetic process
0030272 : Molecular Function : 5-formyltetrahydrofolate cyclo-ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000502149
(
BC143705
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 1.)
genome : 86,565,578 - 86,588,809 (23,232)
query : 1 - 1,206 (1,206/1,206)
8 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
0.943)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR002698 : 5-formyltetrahydrofolate cyclo-ligase
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR024185 : 5-formyltetrahydrofolate cyclo-ligase-like domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0005524 : Molecular Function : ATP binding
0009396 : Biological Process : folic acid-containing compound biosynthetic process
0030272 : Molecular Function : 5-formyltetrahydrofolate cyclo-ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16.1667, nucl 11.5,
cyto_mito 9.83333, cyto_plas 9.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000502151
(
BC143707
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 4.)
genome : 86,565,578 - 86,588,809 (23,232)
query : 1 - 1,210 (1,210/1,210)
8 exons
identity = 0.997
3'(0.994;1.000;0.991;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR002698 : 5-formyltetrahydrofolate cyclo-ligase
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR024185 : 5-formyltetrahydrofolate cyclo-ligase-like domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0005524 : Molecular Function : ATP binding
0009396 : Biological Process : folic acid-containing compound biosynthetic process
0030272 : Molecular Function : 5-formyltetrahydrofolate cyclo-ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 13, cyto_mito 7.33333,
cyto_plas 7.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000642348 (
ENST00000543303
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 4.)
genome : 86,565,578 - 86,588,809 (23,232)
query : 1 - 1,207 (1,207/1,207)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 12.5, cyto_mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000679100 (
ENST00000566050
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 5.)
genome : 86,565,578 - 86,588,809 (23,232)
query : 1 - 1,270 (1,270/1,270)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 12.5, nucl 11.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000492350
(
AK297726
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 4.)
genome : 86,565,583 - 86,588,841 (23,259)
query : 1 - 1,234 (1,234/1,234)
8 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR002698 : 5-formyltetrahydrofolate cyclo-ligase
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR024185 : 5-formyltetrahydrofolate cyclo-ligase-like domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0005524 : Molecular Function : ATP binding
0009396 : Biological Process : folic acid-containing compound biosynthetic process
0030272 : Molecular Function : 5-formyltetrahydrofolate cyclo-ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 14, cyto_mito 7.83333,
cyto_plas 7.83333, mito_nucl 7.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000680545 (
ENST00000567539
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 1.)
genome : 86,565,942 - 86,588,841 (22,900)
query : 1 - 556 (556/556)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 12, nucl 6, extr_plas 6, cyto_plas 6,
cyto_golg 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000675305 (
ENST00000562096
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 5.)
genome : 86,565,968 - 86,576,151 (10,184)
query : 1 - 691 (691/691)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 9, cyto 4.5, cyto_nucl 3.5, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000036401
(
BC013911
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 3.)
genome : 86,574,326 - 86,588,355 (14,030)
query : 1 - 1,142 (1,142/1,172)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR002698 : 5-formyltetrahydrofolate cyclo-ligase
IPR024185 : 5-formyltetrahydrofolate cyclo-ligase-like domain
GO :
0005524 : Molecular Function : ATP binding
0009396 : Biological Process : folic acid-containing compound biosynthetic process
0030272 : Molecular Function : 5-formyltetrahydrofolate cyclo-ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12.1667, cyto_pero 10.5,
cyto_plas 10.5, extr 5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000676113 (
ENST00000562940
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 3.)
genome : 86,574,326 - 86,588,356 (14,031)
query : 1 - 1,143 (1,143/1,143)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12.1667, cyto_pero 10.5,
cyto_plas 10.5, extr 5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000679505 (
ENST00000566469
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 5.)
genome : 86,575,141 - 86,588,354 (13,214)
query : 1 - 824 (824/824)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.1667, cyto_pero 10,
cyto_plas 10, nucl 6, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000681954 (
ENST00000569000
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 1.)
genome : 86,575,345 - 86,588,841 (13,497)
query : 1 - 573 (573/573)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.8333, nucl 10.5, cyto_pero 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000681762 (
ENST00000568798
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 4.)
genome : 86,575,716 - 86,588,841 (13,126)
query : 1 - 560 (560/560)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, extr 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000676165 (
ENST00000562994
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 5.)
genome : 86,575,718 - 86,588,841 (13,124)
query : 1 - 565 (565/565)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 5, mito 5, mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000674743 (
ENST00000561522
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 5.)
genome : 86,575,723 - 86,588,841 (13,119)
query : 1 - 543 (543/543)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 7, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000677490 (
ENST00000564364
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 4.)
genome : 86,580,211 - 86,588,760 (8,550)
query : 1 - 493 (493/493)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13, extr 6, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000681028 (
ENST00000568037
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 2.)
genome : 86,580,946 - 86,588,361 (7,416)
query : 7 - 651 (645/651)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, extr 9, mito 8, cyto_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000675201 (
ENST00000561989
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 3.)
genome : 86,581,673 - 86,588,775 (7,103)
query : 1 - 508 (508/508)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, mito 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000678558 (
ENST00000565482
)
(Methenyltetrahydrofolate synthase domain-containing protein isoform 1.)
genome : 86,582,094 - 86,588,627 (6,534)
query : 1 - 581 (581/581)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 17, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013314
HIT000675063 (
ENST00000561848
)
(Conserved hypothetical protein.)
genome : 86,585,644 - 86,587,327 (1,684)
query : 1 - 571 (571/571)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 11.8333, extr 9, cyto 6,
cyto_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013314)
HIX0013315
HIT000011855
(
AK055241
)
Representative transcript
(Conserved hypothetical protein.)
genome : 86,588,926 - 86,590,905 (1,980)
query : 3 - 1,982 (1,980/1,982)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 5.83333, nucl 5, cyto 4.5,
cyto_pero 3.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013315)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000008950
Pan
sp. (Chimpanzee) : ENSPTRT00000044789
HIX0013315
HIT000562873 (
NR_026674
)
(Conserved hypothetical protein.)
genome : 86,588,926 - 86,590,905 (1,980)
query : 1 - 1,980 (1,980/1,980)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 5.83333, nucl 5, cyto 4.5,
cyto_pero 3.16667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013315)
HIX0223495
HIT000676441 (
ENST00000563280
)
(Non-protein coding transcript.)
genome : 86,598,751 - 86,601,367 (2,617)
query : 1 - 319 (319/319)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223495)
HIX0038664
HIT000122393 (
ENST00000320354
)
(Forkhead box protein C2; Forkhead-related protein FKHL14; Mesenchyme fork head protein 1; MFH-1 protein; Transcription factor FKH-14;)
genome : 86,600,857 - 86,602,539 (1,683)
query : 1 - 1,683 (1,683/1,683)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038664)
HIX0038664
HIT000201956 (
NM_005251
)
(Forkhead box protein C2; Forkhead-related protein FKHL14; Mesenchyme fork head protein 1; MFH-1 protein; Transcription factor FKH-14;)
genome : 86,600,857 - 86,602,539 (1,683)
query : 1 - 1,683 (1,683/1,683)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038664)
HIX0038664
HIT000386892
(
BC113439
)
Representative transcript
(Forkhead box protein C2; Forkhead-related protein FKHL14; Mesenchyme fork head protein 1; MFH-1 protein; Transcription factor FKH-14;)
genome : 86,600,857 - 86,602,539 (1,683)
query : 1 - 1,683 (1,683/1,683)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR001766 : Transcription factor, fork head
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR018122 : Fork head domain conserved site1
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038664)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK146887
Danio
sp. (Zebrafish) : BC046028
Gallus
sp. (Chicken) : ENSGALT00000037132
Macaca
sp. (Macaque) : ENSMMUT00000027393
Monodelphis
sp. (Opossum) : XM_001365854
Pan
sp. (Chimpanzee) : XM_523450
Canis
sp. (Dog) : XM_855855
Bos
sp. (Cow) : XM_867203
HIX0038664
HIT000386890
(
BC113437
)
(Forkhead box protein C2; Forkhead-related protein FKHL14; Mesenchyme fork head protein 1; MFH-1 protein; Transcription factor FKH-14;)
genome : 86,600,857 - 86,602,532 (1,676)
query : 1 - 1,676 (1,676/1,676)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR001766 : Transcription factor, fork head
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR018122 : Fork head domain conserved site1
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038664)
HIX0038663
HIT000705436 (
ENST00000593625
)
(Forkhead box protein L1; Forkhead-related protein FKHL11; Forkhead-related transcription factor 7; FREAC-7;)
genome : 86,609,974 - 86,612,672 (2,699)
query : 1 - 592 (592/592)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038663)
HIX0038663
HIT000201955 (
NM_005250
)
(Forkhead box protein L1; Forkhead-related protein FKHL11; Forkhead-related transcription factor 7; FREAC-7;)
genome : 86,612,115 - 86,615,304 (3,190)
query : 1 - 3,190 (3,190/3,207)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038663)
HIX0038663
HIT000336158
(
BC100027
)
(Forkhead box protein L1; Forkhead-related protein FKHL11; Forkhead-related transcription factor 7; FREAC-7;)
genome : 86,612,115 - 86,615,296 (3,182)
query : 1 - 3,181 (3,181/3,204)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR001766 : Transcription factor, fork head
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR018122 : Fork head domain conserved site1
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038663)
HIX0038663
HIT000122352 (
ENST00000320241
)
(Forkhead box protein L1; Forkhead-related protein FKHL11; Forkhead-related transcription factor 7; FREAC-7;)
genome : 86,612,115 - 86,615,303 (3,189)
query : 1 - 3,189 (3,189/3,189)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038663)
HIX0038663
HIT000387516
(
BC117226
)
Representative transcript
(Forkhead box protein L1; Forkhead-related protein FKHL11; Forkhead-related transcription factor 7; FREAC-7;)
genome : 86,612,287 - 86,613,436 (1,150)
query : 1 - 1,150 (1,150/1,150)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR001766 : Transcription factor, fork head
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR018122 : Fork head domain conserved site1
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038663)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC055156
Oryzias
sp. (Medaka) : EF577483
Monodelphis
sp. (Opossum) : ENSMODT00000005694
Pongo
sp. (Orangutan) : ENSPPYT00000008951
Gallus
sp. (Chicken) : XM_001231598
Equus
sp. (Horse) : XM_001916615
Pan
sp. (Chimpanzee) : XM_511154
Bos
sp. (Cow) : XM_583889
Canis
sp. (Dog) : XM_846532
HIX0013316
HIT000005503
(
AK022229
)
Representative transcript
(Conserved hypothetical protein.)
genome : 86,628,795 - 86,631,245 (2,451)
query : 1 - 2,451 (2,451/2,451)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 4, cyto_pero 2.5, mito_nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013316)
HIX0223669
HIT000679521 (
ENST00000566485
)
(Non-protein coding transcript.)
genome : 86,669,934 - 86,670,751 (818)
query : 1 - 269 (269/269)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223669)
HIX0223627
HIT000678881 (
ENST00000565822
)
(Hypothetical short protein.)
genome : 86,679,907 - 86,702,529 (22,623)
query : 1 - 508 (508/508)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 6.5, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223627)
HIX0038616
HIT000260292
(
BC062224
)
(Hypothetical short protein.)
genome : 86,754,290 - 86,755,560 (1,271)
query : 6 - 515 (510/544)
2 exons
identity = 0.994
3'(0.991;1.000)5'
coverage = 0.990
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 11.5, cyto_nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038616)
HIX0038616
HIT000676490 (
ENST00000563331
)
(Hypothetical short protein.)
genome : 86,754,294 - 86,755,560 (1,267)
query : 1 - 506 (506/506)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 11.5, cyto_nucl 8.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038616)
HIX0038616
HIT000096707
(
BC041439
)
Representative transcript
(Conserved hypothetical protein.)
genome : 86,754,441 - 86,755,565 (1,125)
query : 1 - 364 (364/437)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 11.5, cyto_nucl 8.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038616)
HIX0223143
HIT000682674 (
ENST00000569740
)
(Hypothetical short protein.)
genome : 86,755,697 - 86,771,432 (15,736)
query : 1 - 542 (542/542)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto 1.5, cyto_nucl 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223143)
HIX0223143
HIT000675274 (
ENST00000562064
)
(Hypothetical short protein.)
genome : 86,755,698 - 86,771,325 (15,628)
query : 1 - 550 (550/550)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223143)
HIX0223647
HIT000679157 (
ENST00000566109
)
(Conserved hypothetical protein.)
genome : 86,939,781 - 86,940,078 (298)
query : 1 - 298 (298/298)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12, extr 7, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223647)
HIX0027055
HIT000048066
(
AK128193
)
Representative transcript
(Conserved hypothetical protein.)
genome : 87,091,390 - 87,097,597 (6,208)
query : 1 - 4,084 (4,084/4,084)
3 exons
identity = 0.998
5'(0.998;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 11, cyto_nucl 9, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027055)
HIX0027055
HIT000527984 (
ENST00000430050
)
(Conserved hypothetical protein.)
genome : 87,091,390 - 87,097,597 (6,208)
query : 1 - 4,083 (4,083/4,083)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 11, cyto_nucl 9, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027055)
HIX0038640
HIT000110317 (
ENST00000268638
)
(Interferon regulatory factor 8; IRF-8; Interferon consensus sequence-binding protein; H-ICSBP; ICSBP;)
genome : 85,932,409 - 85,956,215 (23,807)
query : 1 - 3,030 (3,030/3,030)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038640)
HIX0038640
HIT000432390
(
AK313524
)
(Interferon regulatory factor 8; IRF-8; Interferon consensus sequence-binding protein; H-ICSBP; ICSBP;)
genome : 85,932,409 - 85,954,888 (22,480)
query : 1 - 1,703 (1,703/1,703)
9 exons
identity = 0.999
5'(1.000;1.000;0.995;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001346 : Interferon regulatory factor DNA-binding domain
IPR008984 : SMAD/FHA domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR017855 : SMAD domain-like
IPR019471 : Interferon regulatory factor-3
IPR019817 : Interferon regulatory factor, conserved site
GO :
0000975 : Molecular Function : regulatory region DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005515 : Molecular Function : protein binding
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038640)
HIX0038640
HIT000199083 (
NM_002163
)
(Interferon regulatory factor 8; IRF-8; Interferon consensus sequence-binding protein; H-ICSBP; ICSBP;)
genome : 85,932,774 - 85,956,210 (23,437)
query : 1 - 2,660 (2,660/2,678)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 16
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038640)
HIX0038640
HIT000388839
(
BC126247
)
Representative transcript
(Interferon regulatory factor 8; IRF-8; Interferon consensus sequence-binding protein; H-ICSBP; ICSBP;)
genome : 85,932,779 - 85,955,970 (23,192)
query : 1 - 2,414 (2,414/2,414)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001346 : Interferon regulatory factor DNA-binding domain
IPR008984 : SMAD/FHA domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR017855 : SMAD domain-like
IPR019471 : Interferon regulatory factor-3
IPR019817 : Interferon regulatory factor, conserved site
GO :
0000975 : Molecular Function : regulatory region DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005515 : Molecular Function : protein binding
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038640)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB120371
Mus
sp. (Mouse) : AK157249
Danio
sp. (Zebrafish) : BC075963
Bos
sp. (Cow) : BC134473
Pongo
sp. (Orangutan) : CR860894
Oryzias
sp. (Medaka) : ENSORLT00000022815
Tetraodon
sp. (Tetraodon) : GSTENT00017649001
Gallus
sp. (Chicken) : L39767
Takifugu
sp. (Fugu) : SINFRUT00000134205
Takifugu
sp. (Fugu) : SINFRUT00000165275
Macaca
sp. (Macaque) : XM_001084409
Pan
sp. (Chimpanzee) : XM_001154894
Monodelphis
sp. (Opossum) : XM_001365740
Equus
sp. (Horse) : XM_001502568
Canis
sp. (Dog) : XM_546793
HIX0038640
HIT000196803
(
M91196
)
(Interferon regulatory factor 8; IRF-8; Interferon consensus sequence-binding protein; H-ICSBP; ICSBP;)
genome : 85,932,791 - 85,955,099 (22,309)
query : 9 - 1,537 (1,529/1,538)
9 exons
identity = 0.998
5'(0.974;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995)3'
coverage = 0.994
InterPro :
IPR001346 : Interferon regulatory factor DNA-binding domain
IPR008984 : SMAD/FHA domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR017855 : SMAD domain-like
IPR019471 : Interferon regulatory factor-3
IPR019817 : Interferon regulatory factor, conserved site
GO :
0000975 : Molecular Function : regulatory region DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005515 : Molecular Function : protein binding
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038640)
HIX0038640
HIT000677908 (
ENST00000564803
)
(Interferon regulatory factor 8; IRF-8; Interferon consensus sequence-binding protein; H-ICSBP; ICSBP;)
genome : 85,936,444 - 85,952,406 (15,963)
query : 1 - 1,038 (1,038/1,038)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038640)
HIX0038640
HIT000679407 (
ENST00000566369
)
(Interferon regulatory factor 8; IRF-8; Interferon consensus sequence-binding protein; H-ICSBP; ICSBP;)
genome : 85,942,594 - 85,955,902 (13,309)
query : 1 - 1,582 (1,582/1,582)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038640)
HIX0194410
pHIT000116058 ( pHIT000116058 )
Representative transcript
(Hypothetical short protein.)
genome : 85,536,424 - 85,585,521 (49,098)
query : 1 - 231 (231/231)
4 exons
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194410)
CAGE tag :
T16F05028F15
HIX0013308
pHIT000027764 ( pHIT000027764 )
(Genetic suppressor element 1 isoform 1.)
genome : 85,640,724 - 85,706,145 (65,422)
query : 1 - 3,303 (3,303/3,303)
16 exons
InterPro :
IPR022207 : Genetic suppressor element-like
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013308)
CAGE tag :
H10BA44P2005,H21BA15J2102,H21BA50N1102
H21BB61C1116,H39BB31G0101
HIX0135315
pHIT000027779 ( pHIT000027779 )
Representative transcript
(Conserved hypothetical protein.)
genome : 85,849,861 - 85,850,142 (282)
query : 1 - 282 (282/282)
1 exon
InterPro :
IPR016094 : Ribosomal protein L1, 2-layer alpha/beta-sandwich
IPR016095 : Ribosomal protein L1, 3-layer alpha/beta-sandwich
IPR023674 : Ribosomal protein L1-like
IPR028364 : Ribosomal protein L1/ribosomal biogenesis protein
GO :
0003723 : Molecular Function : RNA binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0135315)
CAGE tag :
H04BA95L1606,H05BA14P1407,H05BA43O0902
H05BA46K0602,H05BA78A1807
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XR_020961
HIX0223155
pHIT000027780 ( pHIT000027780 )
Representative transcript
(Conserved hypothetical protein.)
genome : 85,932,367 - 85,954,888 (22,522)
query : 1 - 2,031 (2,031/2,031)
11 exons
InterPro :
IPR001346 : Interferon regulatory factor DNA-binding domain
IPR008984 : SMAD/FHA domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR017855 : SMAD domain-like
IPR019471 : Interferon regulatory factor-3
IPR019817 : Interferon regulatory factor, conserved site
GO :
0000975 : Molecular Function : regulatory region DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005515 : Molecular Function : protein binding
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223155)
CAGE tag :
H08BA59B0808,H10BA50J2205
HIX0194715
pHIT000027781 ( pHIT000027781 )
Representative transcript
(Conserved hypothetical protein.)
genome : 86,003,038 - 86,007,737 (4,700)
query : 1 - 1,542 (1,542/1,542)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194715)
CAGE tag :
H08BA59B0808,H10BA50J2205
HIX0194413
pHIT000027787 ( pHIT000027787 )
Representative transcript
(Hypothetical protein.)
genome : 86,547,236 - 86,552,900 (5,665)
query : 1 - 726 (726/726)
4 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194413)
CAGE tag :
H06BA06H1504,H08BA06A0410,H08BA39J2411
H09BA32K1703,H10BA43L0606
HIX0194413
pHIT000089946 ( pHIT000089946 )
(Hypothetical protein.)
genome : 86,549,621 - 86,552,900 (3,280)
query : 1 - 534 (534/534)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194413)
CAGE tag :
H05BA17E0703,H05BA32N2302,H05BA36K2405
H05BA74G2301,H05BA95L2206
HIX0194716
pHIT000027788 ( pHIT000027788 )
Representative transcript
(Conserved hypothetical protein.)
genome : 86,557,839 - 86,561,457 (3,619)
query : 1 - 222 (222/222)
3 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194716)
CAGE tag :
H06BA06H1504,H08BA06A0410,H08BA39J2411
H09BA32K1703,H10BA43L0606
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : XR_010121
Pan
sp. (Chimpanzee) : XR_021803
HIX0202300
eHIT000006381 ( ESTsASS_16_604 )
(Non-protein coding transcript.)
genome : 85,741,123 - 85,784,697 (43,575)
query : 1 - 906 (906/906)
4 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202300)
ESTs used for assembly :
BQ672221,AA760709
AC092377.3
85500001-85510142 F -
NCBI
AC133540.2
85510143-85550470 F +
NCBI
AC147772.1
85550471-85555683 F +
NCBI
AC137492.2
85555684-85591569 F -
NCBI
AC092127.3
85591570-85629173 F -
NCBI
AC123908.3
85629174-85724474 F +
NCBI
AC018695.6
85724475-85916715 F +
NCBI
AC092723.3
85916716-86105024 F -
NCBI
AC135012.2
86105025-86255000 F -
NCBI
AC040170.9
86255001-86364541 F -
NCBI
AC092327.4
86364542-86475116 F +
NCBI
AC125792.2
86475117-86508921 F +
NCBI
AC009108.10
86508922-86677441 F -
NCBI
AC009154.5
86677442-86740364 F +
NCBI
AC130467.2
86740365-86854544 F -
NCBI
AC093519.3
86854545-87006835 F -
NCBI
AC106745.4
87006836-87100000 F -
NCBI