bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0059700
HIT000136202 (
ENST00000343572
)
(C2 domain containing protein.)
genome : 5,810 - 31,427 (25,618)
query : 1 - 1,281 (1,281/1,281)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11.3333, mito 10.5,
mito_nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059700)
HIX0059700
HIT000707715 (
ENST00000595924
)
(C2 domain containing protein.)
genome : 5,810 - 31,427 (25,618)
query : 1 - 1,281 (1,281/1,281)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11.3333, mito 10.5,
mito_nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059700)
HIX0059700
HIT000599682 (
ENST00000496357
)
(C2 domain containing protein.)
genome : 6,011 - 31,427 (25,417)
query : 1 - 1,080 (1,080/1,080)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11.3333, mito 10.5,
mito_nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059700)
HIX0059700
HIT000687948 (
ENST00000575802
)
(C2 domain containing protein.)
genome : 13,331 - 30,961 (17,631)
query : 1 - 418 (418/418)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 4, nucl 2, mito 2, cyto_pero 2,
cyto_plas 2, cyto_golg 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059700)
HIX0059700
HIT000713887 (
ENST00000602154
)
(C2 domain containing protein.)
genome : 13,331 - 30,961 (17,631)
query : 1 - 418 (418/418)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 4, nucl 2, mito 2, cyto_pero 2,
cyto_plas 2, cyto_golg 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059700)
HIX0212477
HIT000688262 (
ENST00000576171
)
(Hypothetical short protein.)
genome : 33,615 - 41,378 (7,764)
query : 1 - 1,185 (1,185/1,185)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212477)
HIX0212477
HIT000705377 (
ENST00000593566
)
(Conserved hypothetical protein.)
genome : 33,615 - 41,378 (7,764)
query : 1 - 1,185 (1,185/1,185)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212477)
HIX0212477
HIT000581642 (
ENST00000477499
)
(Hypothetical short protein.)
genome : 33,615 - 37,038 (3,424)
query : 1 - 787 (787/787)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 7.5, cyto_nucl 5.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212477)
HIX0017446
HIT000203531 (
NM_006987
)
(Rab-binding domain containing protein.)
genome : 62,180 - 202,633 (140,454)
query : 1 - 2,754 (2,754/2,754)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 14.5, nucl 12.5, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000655615 (
NM_001190411
)
(Rab-binding domain containing protein.)
genome : 62,180 - 202,633 (140,454)
query : 1 - 2,578 (2,578/2,578)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 14.5, nucl 12.5, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000655616 (
NM_001190412
)
(Rab-binding domain containing protein.)
genome : 62,180 - 202,633 (140,454)
query : 1 - 2,667 (2,667/2,667)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 8.5, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000655617 (
NM_001190413
)
(Rab-binding domain containing protein.)
genome : 62,180 - 202,633 (140,454)
query : 1 - 2,491 (2,491/2,491)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 8.5, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000002944
(
AK000469
)
Representative transcript
(Rab effector Noc2; No C2 domains protein; Rabphilin-3A-like protein;)
genome : 62,296 - 202,576 (140,281)
query : 1 - 2,581 (2,581/2,610)
10 exons
identity = 0.997
3'(0.996;1.000;0.991;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 14.5, nucl 12.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AB158403
Rattus
sp. (Rat) : BC091126
Gallus
sp. (Chicken) : CR353553
Bos
sp. (Cow) : ENSBTAT00000035180
Equus
sp. (Horse) : ENSECAT00000008991
Pongo
sp. (Orangutan) : ENSPPYT00000009094
Monodelphis
sp. (Opossum) : XM_001370696
Danio
sp. (Zebrafish) : XM_001921023
Canis
sp. (Dog) : XM_848866
HIX0017446
HIT000032251
(
BC005153
)
(Rab effector Noc2; No C2 domains protein; Rabphilin-3A-like protein;)
genome : 62,296 - 202,888 (140,593)
query : 10 - 2,815 (2,806/2,832)
9 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR010911 : Rab-binding domain
IPR011011 : Zinc finger, FYVE/PHD-type
GO :
0006886 : Biological Process : intracellular protein transport
0017137 : Molecular Function : Rab GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 8.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000123494 (
ENST00000323434
)
(Rab-binding domain containing protein.)
genome : 62,293 - 202,888 (140,596)
query : 1 - 2,809 (2,809/2,809)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 8.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000686592 (
ENST00000574223
)
(Rab-binding domain containing protein.)
genome : 62,293 - 202,888 (140,596)
query : 1 - 2,896 (2,896/2,896)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 14.5, nucl 12.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000706663 (
ENST00000594863
)
(Rab-binding domain containing protein.)
genome : 62,293 - 202,888 (140,596)
query : 1 - 2,809 (2,809/2,809)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 8.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000127156 (
ENST00000331302
)
(Rab-binding domain containing protein.)
genome : 62,293 - 202,598 (140,306)
query : 1 - 2,606 (2,606/2,606)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 14.5, nucl 12.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000708238 (
ENST00000596450
)
(Rab-binding domain containing protein.)
genome : 62,293 - 202,598 (140,306)
query : 1 - 2,606 (2,606/2,606)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 14.5, nucl 12.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000070633
(
AF129812
)
(Rab effector Noc2; No C2 domains protein; Rabphilin-3A-like protein;)
genome : 62,293 - 183,726 (121,434)
query : 11 - 2,546 (2,536/2,546)
9 exons
identity = 0.994
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
0.976;0.942)5'
coverage = 0.996
InterPro :
IPR010911 : Rab-binding domain
IPR011011 : Zinc finger, FYVE/PHD-type
IPR017455 : Zinc finger, FYVE-related
GO :
0006886 : Biological Process : intracellular protein transport
0017137 : Molecular Function : Rab GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 14.5, nucl 12.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000685503 (
ENST00000572965
)
(Hypothetical protein.)
genome : 63,115 - 65,724 (2,610)
query : 1 - 880 (880/880)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 12.5, extr 11, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000707787 (
ENST00000595996
)
(Hypothetical protein.)
genome : 63,115 - 65,724 (2,610)
query : 1 - 880 (880/880)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 12.5, extr 11, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000635534 (
ENST00000536489
)
(Rab-binding domain containing protein.)
genome : 63,436 - 202,633 (139,198)
query : 1 - 1,235 (1,235/1,235)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 8.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000709718 (
ENST00000597943
)
(Rab-binding domain containing protein.)
genome : 63,436 - 202,633 (139,198)
query : 1 - 1,235 (1,235/1,235)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 8.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000424747
(
AK291950
)
(Rab effector Noc2; No C2 domains protein; Rabphilin-3A-like protein;)
genome : 63,436 - 202,602 (139,167)
query : 1 - 1,204 (1,204/1,204)
8 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;1.000;1.000;0.991;
1.000)5'
coverage = 1.000
InterPro :
IPR010911 : Rab-binding domain
IPR011011 : Zinc finger, FYVE/PHD-type
GO :
0006886 : Biological Process : intracellular protein transport
0017137 : Molecular Function : Rab GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 8.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000334751
(
BC093776
)
(Rab-binding domain containing protein.)
genome : 63,563 - 177,371 (113,809)
query : 1 - 1,065 (1,065/1,065)
8 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.986;
1.000)5'
coverage = 1.000
InterPro :
IPR010911 : Rab-binding domain
IPR011011 : Zinc finger, FYVE/PHD-type
IPR017455 : Zinc finger, FYVE-related
GO :
0006886 : Biological Process : intracellular protein transport
0017137 : Molecular Function : Rab GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 14.5, nucl 12.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000386866
(
BC113413
)
(Rab-binding domain containing protein.)
genome : 63,563 - 177,371 (113,809)
query : 1 - 1,065 (1,065/1,065)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR010911 : Rab-binding domain
IPR011011 : Zinc finger, FYVE/PHD-type
IPR017455 : Zinc finger, FYVE-related
GO :
0006886 : Biological Process : intracellular protein transport
0017137 : Molecular Function : Rab GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 14.5, nucl 12.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000501771
(
BC143311
)
(Rab-binding domain containing protein.)
genome : 63,563 - 177,371 (113,809)
query : 1 - 916 (916/916)
7 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.992;0.986;0.991)5'
coverage = 1.000
InterPro :
IPR010911 : Rab-binding domain
IPR011011 : Zinc finger, FYVE/PHD-type
IPR017455 : Zinc finger, FYVE-related
GO :
0006886 : Biological Process : intracellular protein transport
0017137 : Molecular Function : Rab GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11, extr 7, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000684739 (
ENST00000572075
)
(Conserved hypothetical protein.)
genome : 63,595 - 84,376 (20,782)
query : 1 - 569 (569/569)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, extr 3, nucl 2.5, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000713212 (
ENST00000601473
)
(Conserved hypothetical protein.)
genome : 63,595 - 84,376 (20,782)
query : 1 - 569 (569/569)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, extr 3, nucl 2.5, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000683719 (
ENST00000570893
)
(Conserved hypothetical protein.)
genome : 63,615 - 97,478 (33,864)
query : 1 - 594 (594/594)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 5.33333, nucl 4.5, cyto 3,
cyto_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000706769 (
ENST00000594970
)
(Conserved hypothetical protein.)
genome : 63,615 - 97,478 (33,864)
query : 1 - 594 (594/594)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 5.33333, nucl 4.5, cyto 3,
cyto_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000688119 (
ENST00000576001
)
(Rab-binding domain containing protein.)
genome : 64,493 - 169,271 (104,779)
query : 1 - 647 (647/647)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 6, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000706673 (
ENST00000594873
)
(Rab-binding domain containing protein.)
genome : 64,493 - 169,271 (104,779)
query : 1 - 647 (647/647)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 6, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000683774 (
ENST00000570954
)
(Rab-binding domain containing protein.)
genome : 69,488 - 156,472 (86,985)
query : 1 - 568 (568/568)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 8, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000707041 (
ENST00000595244
)
(Rab-binding domain containing protein.)
genome : 69,488 - 156,472 (86,985)
query : 1 - 568 (568/568)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 8, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000688483 (
ENST00000576420
)
(Rab-binding domain containing protein.)
genome : 96,911 - 188,836 (91,926)
query : 1 - 820 (820/820)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.5, extr 11, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000710361 (
ENST00000598596
)
(Rab-binding domain containing protein.)
genome : 96,911 - 188,836 (91,926)
query : 1 - 820 (820/820)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.5, extr 11, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000689047 (
ENST00000577079
)
(Rab-binding domain containing protein.)
genome : 96,935 - 202,581 (105,647)
query : 1 - 814 (814/814)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.5, extr 10, nucl 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000713687 (
ENST00000601952
)
(Rab-binding domain containing protein.)
genome : 96,935 - 202,581 (105,647)
query : 1 - 814 (814/814)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.5, extr 10, nucl 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000687020 (
ENST00000574722
)
(Rab-binding domain containing protein.)
genome : 96,982 - 180,818 (83,837)
query : 1 - 586 (586/586)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, extr 10, cyto_nucl 9.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000709635 (
ENST00000597860
)
(Rab-binding domain containing protein.)
genome : 96,982 - 180,818 (83,837)
query : 1 - 586 (586/586)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, extr 10, cyto_nucl 9.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000687218 (
ENST00000574953
)
(Rab-binding domain containing protein.)
genome : 111,480 - 177,322 (65,843)
query : 1 - 692 (692/692)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 8.5, cyto_nucl 7, extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000705264 (
ENST00000593451
)
(Rab-binding domain containing protein.)
genome : 111,480 - 177,322 (65,843)
query : 1 - 692 (692/692)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 8.5, cyto_nucl 7, extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000683495 (
ENST00000570638
)
(Rab-binding domain containing protein.)
genome : 131,557 - 188,902 (57,346)
query : 1 - 520 (520/537)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.968
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 13, cyto_nucl 10.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000709068 (
ENST00000597289
)
(Rab-binding domain containing protein.)
genome : 131,557 - 188,902 (57,346)
query : 1 - 520 (520/537)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.968
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 13, cyto_nucl 10.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000686203 (
ENST00000573780
)
(Rab-binding domain containing protein.)
genome : 131,560 - 236,045 (104,486)
query : 1 - 531 (531/531)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 13, cyto_nucl 10, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000710921 (
ENST00000599161
)
(Rab-binding domain containing protein.)
genome : 131,560 - 236,045 (104,486)
query : 1 - 531 (531/531)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 13, cyto_nucl 10, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000687886 (
ENST00000575736
)
(Rab-binding domain containing protein.)
genome : 131,619 - 189,450 (57,832)
query : 1 - 566 (566/566)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8, cyto_nucl 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000711570 (
ENST00000599820
)
(Rab-binding domain containing protein.)
genome : 131,619 - 189,450 (57,832)
query : 1 - 566 (566/566)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8, cyto_nucl 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0212365
eHIT000007591 ( ESTsASS_17_784 )
Representative transcript
(Non-protein coding transcript.)
genome : 164,218 - 167,345 (3,128)
query : 1 - 636 (636/636)
10 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212365)
ESTs used for assembly :
BF592463_dup2,BF592463
HIX0017446
HIT000687371 (
ENST00000575130
)
(Rab-binding domain containing protein.)
genome : 169,232 - 236,024 (66,793)
query : 1 - 579 (579/579)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 10, cyto_nucl 8.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000713053 (
ENST00000601314
)
(Rab-binding domain containing protein.)
genome : 169,232 - 236,024 (66,793)
query : 1 - 579 (579/579)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 10, cyto_nucl 8.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000687799 (
ENST00000575634
)
(Rab-binding domain containing protein.)
genome : 169,298 - 191,214 (21,917)
query : 1 - 571 (571/571)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 9, cyto 7.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000713478 (
ENST00000601741
)
(Rab-binding domain containing protein.)
genome : 169,298 - 191,214 (21,917)
query : 1 - 571 (571/571)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 9, cyto 7.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000686037 (
ENST00000573588
)
(Rab-binding domain containing protein.)
genome : 169,313 - 183,857 (14,545)
query : 1 - 593 (593/593)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 9.5, cyto 8.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000713689 (
ENST00000601954
)
(Rab-binding domain containing protein.)
genome : 169,313 - 183,857 (14,545)
query : 1 - 593 (593/593)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 9.5, cyto 8.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000685920 (
ENST00000573448
)
(Conserved hypothetical protein.)
genome : 171,171 - 188,664 (17,494)
query : 1 - 487 (487/487)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 5, cyto_pero 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000707045 (
ENST00000595249
)
(Conserved hypothetical protein.)
genome : 171,171 - 188,664 (17,494)
query : 1 - 487 (487/487)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 5, cyto_pero 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0224368
HIT000683380 (
ENST00000570501
)
(Hypothetical short protein.)
genome : 171,183 - 172,244 (1,062)
query : 1 - 411 (411/411)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, extr 13, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224368)
HIX0224368
HIT000685599 (
ENST00000573074
)
(Hypothetical short protein.)
genome : 171,183 - 172,244 (1,062)
query : 1 - 411 (411/411)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, extr 13, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224368)
HIX0224368
HIT000709731 (
ENST00000597956
)
(Hypothetical short protein.)
genome : 171,183 - 172,244 (1,062)
query : 1 - 411 (411/411)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, extr 13, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224368)
HIX0224368
HIT000685532 (
ENST00000572998
)
(Hypothetical short protein.)
genome : 171,308 - 172,244 (937)
query : 1 - 307 (307/307)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 9, cyto_nucl 8.5, extr_plas 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224368)
HIX0224368
HIT000688766 (
ENST00000576753
)
(Hypothetical short protein.)
genome : 171,308 - 172,244 (937)
query : 1 - 307 (307/307)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 9, cyto_nucl 8.5, extr_plas 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224368)
HIX0224368
HIT000709394 (
ENST00000597617
)
(Hypothetical short protein.)
genome : 171,308 - 172,244 (937)
query : 1 - 307 (307/307)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 9, cyto_nucl 8.5, extr_plas 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224368)
HIX0039165
HIT000722660 (
NM_001242780
)
(Conserved hypothetical protein.)
genome : 180,996 - 183,279 (2,284)
query : 1 - 1,017 (1,017/1,034)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 11.5, nucl 10.5, cyto 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039165)
HIX0039165
HIT000726073 (
NR_040011
)
(Conserved hypothetical protein.)
genome : 180,996 - 183,279 (2,284)
query : 1 - 1,013 (1,013/1,030)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 11, nucl 9.5, cyto 7.5,
extr_plas 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039165)
HIX0039165
HIT000683563 (
ENST00000570711
)
(Conserved hypothetical protein.)
genome : 180,996 - 183,279 (2,284)
query : 1 - 1,013 (1,013/1,013)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 11, nucl 9.5, cyto 7.5,
extr_plas 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039165)
HIX0039165
HIT000686902 (
ENST00000574589
)
(Conserved hypothetical protein.)
genome : 180,996 - 183,279 (2,284)
query : 1 - 1,013 (1,013/1,013)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 11, nucl 9.5, cyto 7.5,
extr_plas 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039165)
HIX0039165
HIT000708263 (
ENST00000596475
)
(Conserved hypothetical protein.)
genome : 180,996 - 183,279 (2,284)
query : 1 - 1,013 (1,013/1,013)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 11, nucl 9.5, cyto 7.5,
extr_plas 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039165)
HIX0017446
HIT000011597
(
AK054983
)
(Hypothetical protein.)
genome : 181,025 - 183,276 (2,252)
query : 1 - 2,252 (2,252/2,252)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000685001 (
ENST00000572372
)
(Hypothetical protein.)
genome : 181,025 - 183,276 (2,252)
query : 1 - 2,252 (2,252/2,252)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000687893 (
ENST00000575743
)
(Hypothetical protein.)
genome : 181,025 - 183,276 (2,252)
query : 1 - 2,252 (2,252/2,252)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000707397 (
ENST00000595606
)
(Hypothetical protein.)
genome : 181,025 - 183,276 (2,252)
query : 1 - 2,252 (2,252/2,252)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0039165
HIT000091411
(
BC027928
)
Representative transcript
(Hypothetical protein.)
genome : 181,049 - 183,235 (2,187)
query : 1 - 2,127 (2,127/2,155)
2 exons
identity = 0.996
5'(0.996;0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13, extr 10, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039165)
HIX0039165
HIT000685498 (
ENST00000572960
)
(Conserved hypothetical protein.)
genome : 181,306 - 181,942 (637)
query : 1 - 555 (555/555)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 11, nucl 10.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039165)
HIX0039165
HIT000688030 (
ENST00000575899
)
(Conserved hypothetical protein.)
genome : 181,306 - 181,942 (637)
query : 1 - 555 (555/555)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 11, nucl 10.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039165)
HIX0039165
HIT000711244 (
ENST00000599489
)
(Conserved hypothetical protein.)
genome : 181,306 - 181,942 (637)
query : 1 - 555 (555/555)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 11, nucl 10.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039165)
HIX0039165
HIT000098485
(
BC047230
)
(Hypothetical protein.)
genome : 181,933 - 183,235 (1,303)
query : 1 - 503 (503/516)
2 exons
identity = 0.994
5'(0.974;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 13, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039165)
HIX0039165
HIT000686048 (
ENST00000573601
)
(Conserved hypothetical protein.)
genome : 181,933 - 183,235 (1,303)
query : 1 - 503 (503/503)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 13, cyto_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039165)
HIX0039165
HIT000686774 (
ENST00000574432
)
(Conserved hypothetical protein.)
genome : 181,933 - 183,235 (1,303)
query : 1 - 503 (503/503)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 13, cyto_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039165)
HIX0039165
HIT000712756 (
ENST00000601014
)
(Conserved hypothetical protein.)
genome : 181,933 - 183,235 (1,303)
query : 1 - 503 (503/503)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 13, cyto_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039165)
HIX0017446
HIT000686403 (
ENST00000574011
)
(Hypothetical short protein.)
genome : 182,997 - 185,813 (2,817)
query : 1 - 533 (533/533)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.1667, nucl 9.5, extr 8, mito 6, cyto 5.5,
cyto_pero 5.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000712501 (
ENST00000600759
)
(Hypothetical short protein.)
genome : 182,997 - 185,813 (2,817)
query : 1 - 533 (533/533)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.1667, nucl 9.5, extr 8, mito 6, cyto 5.5,
cyto_pero 5.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000685417 (
ENST00000572866
)
(Non-protein coding transcript.)
genome : 198,701 - 202,592 (3,892)
query : 1 - 434 (434/434)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0017446
HIT000708229 (
ENST00000596441
)
(Non-protein coding transcript.)
genome : 198,701 - 202,592 (3,892)
query : 1 - 434 (434/434)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017446)
HIX0224381
HIT000685105 (
ENST00000572499
)
(Hypothetical short protein.)
genome : 202,429 - 207,372 (4,944)
query : 1 - 748 (748/748)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 13, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224381)
HIX0224381
HIT000689094 (
ENST00000577132
)
(Hypothetical short protein.)
genome : 202,429 - 207,372 (4,944)
query : 1 - 748 (748/748)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 13, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224381)
HIX0224381
HIT000711296 (
ENST00000599542
)
(Hypothetical short protein.)
genome : 202,429 - 207,372 (4,944)
query : 1 - 748 (748/748)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 13, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224381)
HIX0224375
HIT000684250 (
ENST00000571512
)
(Hypothetical short protein.)
genome : 204,528 - 206,673 (2,146)
query : 1 - 913 (913/913)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 9.66667, mito_nucl 9.66667, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224375)
HIX0224375
HIT000688117 (
ENST00000575999
)
(Hypothetical short protein.)
genome : 204,528 - 206,673 (2,146)
query : 1 - 913 (913/913)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 9.66667, mito_nucl 9.66667, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224375)
HIX0224375
HIT000707543 (
ENST00000595752
)
(Hypothetical short protein.)
genome : 204,528 - 206,673 (2,146)
query : 1 - 913 (913/913)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 9.66667, mito_nucl 9.66667, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224375)
HIX0212464
HIT000571373 (
ENST00000466740
)
(Conserved hypothetical protein.)
genome : 254,326 - 263,814 (9,489)
query : 1 - 388 (388/388)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, extr 8, nucl 2.5, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212464)
HIX0212464
HIT000682985 (
ENST00000570071
)
(Conserved hypothetical protein.)
genome : 254,332 - 263,814 (9,483)
query : 1 - 382 (382/382)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, extr 8, nucl 2.5, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212464)
HIX0212464
HIT000710789 (
ENST00000599026
)
(Hypothetical short protein.)
genome : 254,332 - 259,822 (5,491)
query : 1 - 887 (887/887)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 7, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212464)
HIX0027277
HIT000313555 (
ENST00000360127
)
(Uncharacterized protein C17orf97 homolog;)
genome : 260,118 - 264,457 (4,340)
query : 1 - 1,839 (1,839/1,839)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027277)
HIX0027277
HIT000365299 (
NM_001013672
)
(Uncharacterized protein C17orf97 homolog;)
genome : 260,118 - 264,457 (4,340)
query : 1 - 1,839 (1,839/1,839)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 16
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027277)
HIX0027277
HIT000680124 (
ENST00000567104
)
(Uncharacterized protein C17orf97 homolog;)
genome : 260,118 - 264,367 (4,250)
query : 1 - 1,749 (1,749/1,749)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027277)
HIX0027277
HIT000435161
(
BC141806
)
(Uncharacterized protein C17orf97 homolog;)
genome : 260,119 - 264,354 (4,236)
query : 1 - 1,735 (1,735/1,797)
2 exons
identity = 0.982
5'(0.997;0.978)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027277)
HIX0027277
HIT000683901 (
ENST00000571106
)
(Uncharacterized protein C17orf97 homolog;)
genome : 260,128 - 270,888 (10,761)
query : 1 - 736 (736/736)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, extr 11, cyto_nucl 11, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027277)
HIX0027277
HIT000594899 (
ENST00000491373
)
(Uncharacterized protein C17orf97 homolog;)
genome : 260,152 - 264,096 (3,945)
query : 1 - 878 (878/878)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027277)
HIX0027277
HIT000682599 (
ENST00000569663
)
(Uncharacterized protein C17orf97 homolog;)
genome : 260,152 - 264,096 (3,945)
query : 1 - 878 (878/878)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027277)
HIX0027277
HIT000259684
(
BC057385
)
Representative transcript
(Uncharacterized protein C17orf97 homolog;)
genome : 260,167 - 273,516 (13,350)
query : 1 - 2,225 (2,225/2,243)
5 exons
identity = 0.986
5'(1.000;0.975;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027277)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000009096
Rattus
sp. (Rat) : XM_001080735
Macaca
sp. (Macaque) : XM_001083702
Pan
sp. (Chimpanzee) : XM_001174024
Equus
sp. (Horse) : XM_001502225
Canis
sp. (Dog) : XM_537762
HIX0027277
HIT000264074
(
BC070116
)
(Uncharacterized protein C17orf97 homolog;)
genome : 260,192 - 264,201 (4,010)
query : 1 - 1,509 (1,509/1,524)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027277)
HIX0027277
HIT000687387 (
ENST00000575151
)
(Hypothetical short protein.)
genome : 263,886 - 273,510 (9,625)
query : 1 - 499 (499/499)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 7.16667, nucl 5.5, cyto 5.5,
cyto_pero 4.5, mito_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027277)
HIX0060224
HIT000088320
(
BC014203
)
Representative transcript
(Electroneutral sodium bicarbonate exchanger 1 isoform e.)
genome : 289,772 - 290,719 (948)
query : 1 - 948 (948/965)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0060224)
HIX0060224
HIT000318751 (
NM_182705
)
(Protein FAM101B;)
genome : 289,769 - 295,731 (5,963)
query : 274 - 3,895 (3,622/3,895)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.930
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, nucl 12, cyto 11, extr 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0060224)
HIX0060224
HIT000125931 (
ENST00000329099
)
(Conserved hypothetical protein.)
genome : 289,769 - 295,730 (5,962)
query : 1 - 3,621 (3,621/3,621)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, mito 10, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0060224)
HIX0060224
HIT000679723 (
ENST00000566692
)
(Conserved hypothetical protein.)
genome : 289,769 - 295,730 (5,962)
query : 1 - 3,621 (3,621/3,621)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, mito 10, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0060224)
HIX0019141
HIT000018424
(
AK093557
)
Representative transcript
(Conserved hypothetical protein.)
genome : 289,773 - 292,354 (2,582)
query : 1 - 2,265 (2,265/2,269)
2 exons
identity = 0.995
5'(0.992;0.995)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, extr 9, mito 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019141)
HIX0060224
HIT000066866
(
AF085987
)
(Hypothetical protein.)
genome : 292,370 - 292,912 (543)
query : 13 - 555 (543/569)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, mito 10, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0060224)
HIX0060224
eHIT000007174 ( ESTsASS_17_367 )
(Non-protein coding transcript.)
genome : 292,653 - 295,731 (3,079)
query : 1 - 738 (738/738)
2 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0060224)
ESTs used for assembly :
BX374817
HIX0224641
HIT000684053 (
ENST00000571282
)
(Hypothetical short protein.)
genome : 406,411 - 414,587 (8,177)
query : 1 - 493 (493/493)
3 exons
identity = 0.988
5'(1.000;0.961;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 3.5, pero 3, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224641)
HIX0224588
HIT000494167
(
AK299543
)
Representative transcript
(Conserved hypothetical protein.)
genome : 413,206 - 414,626 (1,421)
query : 1 - 1,421 (1,421/1,421)
1 exon
identity = 0.977
3'(0.977)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 5, cyto_nucl 4, nucl 3.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224588)
HIX0027149
HIT000095698
(
BC039432
)
(Hypothetical protein.)
genome : 414,736 - 415,762 (1,027)
query : 1 - 1,027 (1,027/1,042)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 9, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027149)
HIX0027149
HIT000042980
(
AK123107
)
Representative transcript
(Conserved hypothetical protein.)
genome : 414,737 - 418,180 (3,444)
query : 1 - 3,444 (3,444/3,444)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 10, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027149)
HIX0224122
HIT000012937
(
AK056323
)
Representative transcript
(Conserved hypothetical protein.)
genome : 419,055 - 420,826 (1,772)
query : 3 - 1,774 (1,772/1,774)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 13, cyto 11, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224122)
HIX0224122
HIT000014549
(
AK057942
)
(Conserved hypothetical protein.)
genome : 419,216 - 420,318 (1,103)
query : 2 - 1,104 (1,103/1,104)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 8.5, cyto_nucl 6.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224122)
HIX0224234
HIT000066806
(
AF085927
)
Representative transcript
(Conserved hypothetical protein.)
genome : 421,177 - 421,752 (576)
query : 1 - 575 (575/585)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224234)
HIX0224234
HIT000438200
(
DQ571669
)
(Non-protein coding transcript.)
genome : 421,572 - 421,601 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224234)
HIX0224183
HIT000040823
(
BC029560
)
Representative transcript
(Conserved hypothetical protein.)
genome : 422,363 - 426,233 (3,871)
query : 1 - 488 (488/503)
4 exons
identity = 0.996
3'(0.994;1.000;1.000;0.986)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 10, nucl 5, cyto_pero 5, cyto_plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224183)
HIX0224183
HIT000640948 (
ENST00000541903
)
(Conserved hypothetical protein.)
genome : 422,359 - 426,235 (3,877)
query : 1 - 494 (494/494)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 10, nucl 5, cyto_pero 5, cyto_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224183)
HIX0224632
HIT000683792 (
ENST00000570974
)
(Conserved hypothetical protein.)
genome : 426,380 - 443,816 (17,437)
query : 1 - 478 (478/478)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 13.5, cyto 10.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224632)
HIX0013386
HIT000017399
(
AK092532
)
(Vacuolar protein sorting-associated protein 53 homolog;)
genome : 435,208 - 618,096 (182,889)
query : 1 - 3,204 (3,204/3,204)
20 exons
identity = 0.997
3'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;0.985;1.000;1.000;0.996)5'
coverage = 1.000
InterPro :
IPR007234 : Vps53-like, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 17, cyto_nucl 8, nucl 7, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0013386
HIT000544184 (
ENST00000446250
)
(Vacuolar protein sorting-associated protein 53 homolog isoform 2.)
genome : 435,208 - 618,096 (182,889)
query : 1 - 3,204 (3,204/3,204)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 17, cyto_nucl 8, nucl 7, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0013386
HIT000685560 (
ENST00000573028
)
(Vacuolar protein sorting-associated protein 53 homolog;)
genome : 435,208 - 618,096 (182,889)
query : 1 - 3,204 (3,204/3,204)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 7, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0013386
HIT000207109 (
NM_018289
)
(Vacuolar protein sorting-associated protein 53 homolog;)
genome : 435,533 - 618,096 (182,564)
query : 1 - 2,694 (2,694/2,694)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, pero 5, nucl 4, mito_pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0013386
HIT000004315
(
AK001841
)
(Vacuolar protein sorting-associated protein 53 homolog;)
genome : 435,533 - 526,917 (91,385)
query : 13 - 1,675 (1,663/1,675)
9 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 12.5, mito 5.5, nucl 5,
E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0013386
HIT000113373 (
ENST00000291074
)
(Vacuolar protein sorting-associated protein 53 homolog;)
genome : 435,558 - 618,083 (182,526)
query : 1 - 2,656 (2,656/2,656)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, pero 5, nucl 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0013386
HIT000423140
(
AK290343
)
(Vacuolar protein sorting-associated protein 53 homolog;)
genome : 435,558 - 618,076 (182,519)
query : 1 - 2,649 (2,649/2,649)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007234 : Vps53-like, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, pero 5, nucl 4, mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0013386
HIT000032616
(
BC006116
)
(Vacuolar protein sorting-associated protein 53 homolog;)
genome : 435,948 - 618,008 (182,061)
query : 1 - 2,191 (2,191/2,209)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.996;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007234 : Vps53-like, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, pero 5, nucl 4, mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0013386
HIT000254726
(
AY444797
)
Representative transcript
(Vacuolar protein sorting-associated protein 53 homolog;)
genome : 435,948 - 618,001 (182,054)
query : 4 - 2,274 (2,271/2,292)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.996;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR007234 : Vps53-like, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 4, pero 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ719797
Mus
sp. (Mouse) : AK033495
Danio
sp. (Zebrafish) : BC085598
Pongo
sp. (Orangutan) : CR860864
Monodelphis
sp. (Opossum) : ENSMODT00000012914
Oryzias
sp. (Medaka) : ENSORLT00000010494
Tetraodon
sp. (Tetraodon) : GSTENT00007705001
Takifugu
sp. (Fugu) : SINFRUT00000137907
Rattus
sp. (Rat) : XM_001080583
Pan
sp. (Chimpanzee) : XM_001151860
Equus
sp. (Horse) : XM_001504268
Canis
sp. (Dog) : XM_548308
Bos
sp. (Cow) : XM_869962
Macaca
sp. (Macaque) : XR_009990
HIX0013386
HIT000684502 (
ENST00000571805
)
(Vacuolar protein sorting-associated protein 53 homolog;)
genome : 435,948 - 618,086 (182,139)
query : 1 - 2,356 (2,356/2,356)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 4, pero 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0013386
HIT000395950 (
ENST00000389040
)
(Vacuolar protein sorting-associated protein 53 homolog;)
genome : 436,067 - 617,949 (181,883)
query : 1 - 1,903 (1,903/1,903)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 8, cyto_plas 8, cyto_golg 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0013386
HIT000484975
(
EU434648
)
(Vacuolar protein sorting-associated protein 53 homolog;)
genome : 436,067 - 617,949 (181,883)
query : 1 - 1,903 (1,903/1,903)
18 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007234 : Vps53-like, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 7, pero 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0013386
HIT000484976
(
EU434649
)
(Vacuolar protein sorting-associated protein 53 homolog isoform 2.)
genome : 436,067 - 617,949 (181,883)
query : 1 - 1,269 (1,269/1,269)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.990;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007234 : Vps53-like, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 11, pero 4, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0013386
HIT000484977
(
EU434650
)
(Vacuolar protein sorting-associated protein 53 homolog isoform 2.)
genome : 436,067 - 617,949 (181,883)
query : 1 - 2,013 (2,013/2,013)
18 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.989)5'
coverage = 1.000
InterPro :
IPR007234 : Vps53-like, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, pero 5, nucl 3, mito 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0013386
HIT000503743 (
ENST00000401468
)
(Vacuolar protein sorting-associated protein 53 homolog isoform 2.)
genome : 436,067 - 617,949 (181,883)
query : 1 - 1,269 (1,269/1,269)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 11, pero 4, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0013386
HIT000048313
(
AK128440
)
(Vacuolar protein sorting-associated protein 53 homolog;)
genome : 439,664 - 442,444 (2,781)
query : 1 - 2,781 (2,781/2,781)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 19
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0013386
HIT000683257 (
ENST00000570359
)
(Vacuolar protein sorting-associated protein 53 homolog;)
genome : 439,664 - 442,444 (2,781)
query : 1 - 2,781 (2,781/2,781)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 19
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0013386
HIT000077262
(
AF318335
)
(Vacuolar protein sorting-associated protein 53 homolog isoform 2.)
genome : 440,313 - 618,065 (177,753)
query : 2 - 2,088 (2,087/2,140)
18 exons
identity = 0.999
3'(1.000;1.000;1.000;0.993;0.996;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.995)5'
coverage = 0.983
InterPro :
IPR007234 : Vps53-like, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, pero 4, nucl 3, mito 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0013386
HIT000074933
(
AF246287
)
(Vacuolar protein sorting-associated protein 53 homolog;)
genome : 440,264 - 618,001 (177,738)
query : 4 - 2,077 (2,074/2,078)
18 exons
identity = 0.997
3'(0.974;1.000;1.000;0.986;0.996;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR007234 : Vps53-like, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 4, pero 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0013386
HIT000685194 (
ENST00000572607
)
(Vacuolar protein sorting-associated protein 53 homolog;)
genome : 454,883 - 465,926 (11,044)
query : 1 - 723 (723/732)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 5.5, nucl 5, cyto_pero 5, mito 4.5,
E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0224690
HIT000686401 (
ENST00000574008
)
(Non-protein coding transcript.)
genome : 455,806 - 456,657 (852)
query : 1 - 592 (592/592)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224690)
HIX0224579
HIT000455065_10
(
DQ588534
)
Representative transcript
(Non-protein coding transcript.)
genome : 501,629 - 501,657 (29)
query : 1 - 29 (29/31)
1 exon
identity = 0.966
5'(0.966)3'
coverage = 0.935
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224579)
HIX0013386
HIT000683506 (
ENST00000570650
)
(Vacuolar protein sorting-associated protein 53 homolog;)
genome : 504,120 - 531,471 (27,352)
query : 1 - 729 (729/729)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 9.5, extr 8, mito 5.5, E.R._mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0224693
HIT000686486 (
ENST00000574104
)
(Conserved hypothetical protein.)
genome : 519,242 - 519,835 (594)
query : 1 - 594 (594/594)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 7, cyto 5.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224693)
HIX0013386
HIT000684966 (
ENST00000572334
)
(Vacuolar protein sorting-associated protein 53 homolog;)
genome : 534,790 - 588,435 (53,646)
query : 1 - 561 (561/561)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto_nucl 6, nucl 5.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0013386
HIT000688131 (
ENST00000576019
)
(Vacuolar protein sorting-associated protein 53 homolog;)
genome : 556,566 - 624,957 (68,392)
query : 1 - 613 (613/613)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 5.5, cyto_nucl 5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0013386
HIT000583138 (
ENST00000479057
)
(40S ribosomal protein S4, X isoform; SCR10; Single copy abundant mRNA protein;)
genome : 560,034 - 560,787 (754)
query : 1 - 754 (754/754)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0013386
HIT000687437 (
ENST00000575207
)
(Vacuolar protein sorting-associated protein 53 homolog;)
genome : 560,669 - 618,031 (57,363)
query : 1 - 575 (575/575)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 24, cyto 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0013391
HIT000013446
(
AK056832
)
Representative transcript
(Conserved hypothetical protein.)
genome : 576,936 - 578,907 (1,972)
query : 1 - 1,972 (1,972/1,972)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 13.5, cyto_nucl 8.5, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013391)
HIX0013391
HIT000687346 (
ENST00000575100
)
(MT-A70-like family protein.)
genome : 576,936 - 578,907 (1,972)
query : 1 - 1,972 (1,972/1,972)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013391)
HIX0013391
HIT000684902 (
ENST00000572259
)
(Hypothetical short protein.)
genome : 577,607 - 579,585 (1,979)
query : 1 - 683 (683/683)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 13, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013391)
HIX0013386
HIT000683389 (
ENST00000570510
)
(Vacuolar protein sorting-associated protein 53 homolog;)
genome : 600,658 - 617,753 (17,096)
query : 1 - 570 (570/570)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, extr 8, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0013386
HIT000684201 (
ENST00000571456
)
(Vacuolar protein sorting-associated protein 53 homolog;)
genome : 608,865 - 618,054 (9,190)
query : 1 - 744 (744/744)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 10.5, extr 10, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013386)
HIX0096702
HIT000389548
(
BC127931
)
Representative transcript
(Conserved hypothetical protein.)
genome : 631,016 - 631,808 (793)
query : 7 - 800 (794/805)
1 exon
identity = 0.992
5'(0.992)3'
coverage = 0.986
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 4.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096702)
HIX0013388
HIT000117922 (
ENST00000308278
)
(Protein FAM57A; Protein CT120;)
genome : 635,652 - 646,206 (10,555)
query : 1 - 2,406 (2,406/2,406)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;0.970;0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013388)
HIX0013388
HIT000686683 (
ENST00000574327
)
(Protein FAM57A; Protein CT120;)
genome : 635,652 - 643,826 (8,175)
query : 1 - 852 (852/852)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18.5, extr_plas 10.5, mito 6, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013388)
HIX0013388
HIT000684690 (
ENST00000572018
)
(Protein FAM57A; Protein CT120;)
genome : 635,786 - 644,605 (8,820)
query : 1 - 373 (373/373)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, mito 5, plas 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013388)
HIX0013388
HIT000243588
(
AF477201
)
(Protein FAM57A; Protein CT120;)
genome : 635,798 - 646,075 (10,278)
query : 1 - 2,129 (2,129/2,145)
5 exons
identity = 0.995
5'(0.995;1.000;0.995;0.970;0.997)3'
coverage = 1.000
InterPro :
IPR006634 : TRAM/LAG1/CLN8 homology domain
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013388)
HIX0013388
HIT000040069
(
BC026023
)
(Protein FAM57A; Protein CT120;)
genome : 635,824 - 646,081 (10,258)
query : 1 - 2,013 (2,013/2,030)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006634 : TRAM/LAG1/CLN8 homology domain
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013388)
HIX0013388
HIT000115838 (
ENST00000301324
)
(Protein FAM57A; Protein CT120;)
genome : 635,824 - 646,081 (10,258)
query : 1 - 2,013 (2,013/2,013)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013388)
HIX0013388
HIT000009209
(
AK025935
)
Representative transcript
(Protein FAM57A; Protein CT120;)
genome : 635,847 - 646,075 (10,229)
query : 1 - 2,080 (2,080/2,096)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;0.970;0.999)3'
coverage = 1.000
InterPro :
IPR006634 : TRAM/LAG1/CLN8 homology domain
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013388)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK077374
Danio
sp. (Zebrafish) : BC059567
Bos
sp. (Cow) : BC133377
Gallus
sp. (Chicken) : BX935763
Canis
sp. (Dog) : ENSCAFT00000030379
Oryzias
sp. (Medaka) : ENSORLT00000012386
Oryzias
sp. (Medaka) : ENSORLT00000018576
Pongo
sp. (Orangutan) : ENSPPYT00000009099
Rattus
sp. (Rat) : ENSRNOT00000010168
Tetraodon
sp. (Tetraodon) : GSTENT00026689001
Takifugu
sp. (Fugu) : SINFRUT00000144660
Takifugu
sp. (Fugu) : SINFRUT00000150357
Macaca
sp. (Macaque) : XM_001084389
Monodelphis
sp. (Opossum) : XM_001370351
Equus
sp. (Horse) : XM_001502182
Pan
sp. (Chimpanzee) : XR_025525
HIX0013388
HIT000209483 (
NM_024792
)
(Protein FAM57A; Protein CT120;)
genome : 635,847 - 646,075 (10,229)
query : 1 - 2,080 (2,080/2,096)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;0.970;0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013388)
HIX0013388
HIT000424862
(
AK292065
)
(Protein FAM57A; Protein CT120;)
genome : 635,847 - 644,972 (9,126)
query : 1 - 977 (977/977)
5 exons
identity = 0.995
5'(1.000;1.000;1.000;0.970;0.995)3'
coverage = 1.000
InterPro :
IPR006634 : TRAM/LAG1/CLN8 homology domain
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013388)
HIX0013388
HIT000045019
(
AK125146
)
(Protein FAM57A; Protein CT120;)
genome : 635,917 - 646,123 (10,207)
query : 1 - 2,394 (2,394/2,394)
4 exons
identity = 0.994
5'(0.984;1.000;0.970;0.998)3'
coverage = 1.000
InterPro :
IPR006634 : TRAM/LAG1/CLN8 homology domain
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 27, extr 2, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013388)
HIX0013388
HIT000683552 (
ENST00000570699
)
(Protein FAM57A; Protein CT120;)
genome : 635,917 - 646,123 (10,207)
query : 1 - 2,386 (2,386/2,386)
4 exons
identity = 0.998
5'(1.000;1.000;0.970;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013388)
HIX0013388
HIT000688988 (
ENST00000577008
)
(Protein FAM57A; Protein CT120;)
genome : 636,365 - 645,254 (8,890)
query : 1 - 867 (867/867)
3 exons
identity = 0.994
5'(1.000;0.970;0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12, nucl 6.5, plas 6, mito_pero 6, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013388)
HIX0013388
HIT000087369
(
BC009729
)
(Protein FAM57A; Protein CT120;)
genome : 643,742 - 646,124 (2,383)
query : 1 - 1,683 (1,683/1,698)
2 exons
identity = 0.997
5'(0.971;0.999)3'
coverage = 1.000
InterPro :
IPR006634 : TRAM/LAG1/CLN8 homology domain
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, nucl 4, mito 4, mito_pero 3.83333,
E.R._mito 2.83333, pero 2.5, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013388)
HIX0013388
HIT000683718 (
ENST00000570892
)
(Hypothetical protein.)
genome : 644,904 - 646,124 (1,221)
query : 1 - 677 (677/677)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, nucl 6, mito 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013388)
HIX0136473
HIT000465354
(
DQ598823
)
Representative transcript
(Non-protein coding transcript.)
genome : 645,284 - 645,314 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0136473)
HIX0013389
HIT000205638_03 (
NM_015721
)
(Gem-associated protein 4; Gemin-4; Component of gems 4; p97;)
genome : 647,661 - 655,501 (7,841)
query : 1 - 3,741 (3,741/3,757)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15, nucl 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013389)
HIX0013389
HIT000094219
(
BC036024
)
(Gem-associated protein 4; Gemin-4; Component of gems 4; p97;)
genome : 647,661 - 655,403 (7,743)
query : 3 - 3,645 (3,643/3,661)
2 exons
identity = 0.998
3'(0.998;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15, nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013389)
HIX0013389
HIT000121897 (
ENST00000319004
)
(Gem-associated protein 4; Gemin-4; Component of gems 4; p97;)
genome : 647,654 - 655,501 (7,848)
query : 1 - 3,748 (3,748/3,748)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013389)
HIX0013389
HIT000024271
(
AL080150
)
(Gem-associated protein 4; Gemin-4; Component of gems 4; p97;)
genome : 647,858 - 650,728 (2,871)
query : 1 - 2,871 (2,871/2,924)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 17, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013389)
HIX0013389
HIT000092567
(
BC032084
)
(Gem-associated protein 4; Gemin-4; Component of gems 4; p97;)
genome : 647,858 - 655,417 (7,560)
query : 1 - 3,460 (3,460/3,489)
2 exons
identity = 0.998
3'(0.998;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 15, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013389)
HIX0013389
HIT000072457_03
(
AF173856
)
(Gem-associated protein 4; Gemin-4; Component of gems 4; p97;)
genome : 647,858 - 655,403 (7,546)
query : 3 - 3,448 (3,446/3,472)
2 exons
identity = 0.998
3'(0.998;0.968)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15, nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013389)
HIX0013389
HIT000072711
(
AF177341
)
(Gem-associated protein 4; Gemin-4; Component of gems 4; p97;)
genome : 647,863 - 652,591 (4,729)
query : 1 - 4,729 (4,729/4,752)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15, nucl 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013389)
HIX0013389
HIT000038727
(
BC020062
)
(Gem-associated protein 4; Gemin-4; Component of gems 4; p97;)
genome : 647,863 - 655,431 (7,569)
query : 1 - 3,469 (3,469/3,486)
2 exons
identity = 0.997
3'(0.996;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15, nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013389)
HIX0013389
HIT000024288
(
AL080167
)
(Gem-associated protein 4; Gemin-4; Component of gems 4; p97;)
genome : 647,863 - 648,562 (700)
query : 2 - 701 (700/710)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 4.5, cyto_pero 3.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013389)
HIX0013389
HIT000688789 (
ENST00000576778
)
(Gem-associated protein 4; Gemin-4; Component of gems 4; p97;)
genome : 647,863 - 652,591 (4,729)
query : 1 - 4,729 (4,729/4,729)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15, nucl 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013389)
HIX0013389
HIT000497346
(
AK302722
)
Representative transcript
(Gem-associated protein 4; Gemin-4; Component of gems 4; p97;)
genome : 649,871 - 655,414 (5,544)
query : 1 - 1,182 (1,182/1,182)
3 exons
identity = 0.998
3'(1.000;0.996;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12, cysk 7, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013389)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ851686
Mus
sp. (Mouse) : AK033495
Bos
sp. (Cow) : BT029832
Oryzias
sp. (Medaka) : ENSORLT00000012370
Pongo
sp. (Orangutan) : ENSPPYT00000009100
Pan
sp. (Chimpanzee) : ENSPTRT00000015699
Tetraodon
sp. (Tetraodon) : GSTENT00026690001
Takifugu
sp. (Fugu) : SINFRUT00000144670
Rattus
sp. (Rat) : XM_001080744
Monodelphis
sp. (Opossum) : XM_001364595
Equus
sp. (Horse) : XM_001504264
Canis
sp. (Dog) : XM_848829
HIX0013389
HIT000535203 (
ENST00000437269
)
(Gem-associated protein 4; Gemin-4; Component of gems 4; p97;)
genome : 649,871 - 655,414 (5,544)
query : 1 - 1,182 (1,182/1,182)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12, cysk 7, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013389)
HIX0013389
HIT000448964
(
DQ582433
)
(Non-protein coding transcript.)
genome : 650,107 - 650,134 (28)
query : 1 - 28 (28/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.933
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013389)
HIX0013389
HIT000685951 (
ENST00000573482
)
(Gem-associated protein 4; Gemin-4; Component of gems 4; p97;)
genome : 650,407 - 655,425 (5,019)
query : 1 - 1,015 (1,015/1,015)
3 exons
identity = 0.996
3'(1.000;0.960;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 14, cyto 12, mito 3, pero 3,
mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013389)
HIX0013389
HIT000683262 (
ENST00000570364
)
(Gem-associated protein 4; Gemin-4; Component of gems 4; p97;)
genome : 650,480 - 656,016 (5,537)
query : 1 - 1,048 (1,048/1,048)
3 exons
identity = 0.996
3'(1.000;0.960;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 12.5, cyto 12.5, mito 3, pero 3,
mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013389)
HIX0013389
HIT000688452 (
ENST00000576383
)
(Gem-associated protein 4; Gemin-4; Component of gems 4; p97;)
genome : 650,681 - 657,239 (6,559)
query : 1 - 633 (633/633)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 14, nucl 6, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013389)
HIX0013389
HIT000687222 (
ENST00000574958
)
(Gem-associated protein 4; Gemin-4; Component of gems 4; p97;)
genome : 651,084 - 655,278 (4,195)
query : 1 - 673 (673/673)
3 exons
identity = 0.994
3'(1.000;0.960;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 9.5, cyto_nucl 7, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013389)
HIX0039079
HIT000562365 (
NR_024120
)
(Diazepam-binding inhibitor-like 5; Endozepine-like peptide; ELP;)
genome : 655,573 - 658,576 (3,004)
query : 1 - 3,004 (3,004/3,004)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 10, cyto_nucl 8.5, extr_plas 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039079)
HIX0039079
HIT000074533
(
AF229804
)
Representative transcript
(Diazepam-binding inhibitor-like 5; Endozepine-like peptide; ELP;)
genome : 655,900 - 658,576 (2,677)
query : 1 - 2,677 (2,677/2,677)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 6.5, cyto_nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039079)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000009101
HIX0039079
HIT000635259 (
ENST00000536214
)
(Diazepam-binding inhibitor-like 5; Endozepine-like peptide; ELP;)
genome : 655,900 - 658,576 (2,677)
query : 1 - 2,677 (2,677/2,677)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 10, cyto_nucl 8.5, extr_plas 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039079)
HIX0039079
HIT000547764 (
ENST00000449830
)
(Diazepam-binding inhibitor-like 5; Endozepine-like peptide; ELP;)
genome : 655,907 - 658,128 (2,222)
query : 1 - 840 (840/840)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 10, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039079)
HIX0039079
HIT000551348 (
ENST00000453414
)
(Diazepam-binding inhibitor-like 5; Endozepine-like peptide; ELP;)
genome : 656,124 - 656,373 (250)
query : 1 - 250 (250/250)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 8, cyto_nucl 8, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039079)
HIX0039079
HIT000681902 (
ENST00000568946
)
(Hypothetical short protein.)
genome : 657,549 - 658,128 (580)
query : 1 - 504 (504/504)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 14, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039079)
HIX0224186
HIT000687946 (
ENST00000575800
)
(Non-protein coding transcript.)
genome : 660,337 - 663,401 (3,065)
query : 1 - 276 (276/276)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224186)
HIX0224186
HIT000042551
(
AK122678
)
Representative transcript
(Glyoxalase-like domain containing protein.)
genome : 662,563 - 680,932 (18,370)
query : 1 - 2,311 (2,311/2,311)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR025870 : Glyoxalase-like domain
IPR029068 : Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13, mito 8, nucl 4, E.R._mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224186)
HIX0224186
HIT000683870 (
ENST00000571073
)
(Glyoxalase-like domain containing protein.)
genome : 662,563 - 680,932 (18,370)
query : 1 - 2,311 (2,311/2,311)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13, mito 8, nucl 4, E.R._mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224186)
HIX0224186
HIT000687719 (
ENST00000575528
)
(Conserved hypothetical protein.)
genome : 663,304 - 674,619 (11,316)
query : 1 - 585 (585/585)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16.5, extr 13, mito_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224186)
HIX0224186
HIT000685651 (
ENST00000573137
)
(Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase domain containing protein.)
genome : 663,313 - 674,644 (11,332)
query : 1 - 447 (447/447)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27.5, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224186)
HIX0224186
HIT000387217
(
BC113917
)
(Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase domain containing protein.)
genome : 663,363 - 674,597 (11,235)
query : 4 - 437 (434/440)
5 exons
identity = 0.982
3'(0.991;1.000;1.000;0.954;0.909)5'
coverage = 0.986
InterPro :
IPR029068 : Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224186)
HIX0039324
HIT000075761
(
AF269286
)
Representative transcript
(Conserved hypothetical protein.)
genome : 666,805 - 668,559 (1,755)
query : 1 - 1,753 (1,753/1,771)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, mito 7, cyto 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039324)
HIX0039324
HIT000343643 (
ENST00000358446
)
(Conserved hypothetical protein.)
genome : 666,805 - 668,559 (1,755)
query : 1 - 1,754 (1,754/1,754)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, mito 7, cyto 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039324)
HIX0039324
HIT000683649 (
ENST00000570809
)
(Conserved hypothetical protein.)
genome : 666,805 - 668,559 (1,755)
query : 1 - 1,755 (1,755/1,755)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039324)
HIX0224186
HIT000087561
(
BC010902
)
(Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase domain containing protein.)
genome : 674,630 - 685,520 (10,891)
query : 4 - 506 (503/531)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.990
InterPro :
IPR029068 : Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, nucl 11, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224186)
HIX0224186
HIT000684868 (
ENST00000572220
)
(Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase domain containing protein.)
genome : 679,015 - 685,516 (6,502)
query : 1 - 417 (417/428)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.974
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, extr 7, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224186)
HIX0224186
HIT000688696 (
ENST00000576670
)
(Conserved hypothetical protein.)
genome : 680,121 - 685,433 (5,313)
query : 1 - 562 (562/562)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 8, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224186)
HIX0224186
HIT000686706 (
ENST00000574354
)
(Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase domain containing protein.)
genome : 681,542 - 685,520 (3,979)
query : 1 - 558 (558/558)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224186)
HIX0224186
HIT000688763 (
ENST00000576750
)
(Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase domain containing protein.)
genome : 681,663 - 685,520 (3,858)
query : 1 - 558 (558/558)
3 exons
identity = 0.993
3'(1.000;0.968;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, extr 11, cyto_mito 10, cyto_pero 3.16667,
cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224186)
HIX0013392
HIT000072714
(
AF177344
)
Representative transcript
(RNA methyltransferase-like protein 1; EC=2.1.1.-;)
genome : 685,513 - 695,741 (10,229)
query : 1 - 1,801 (1,801/1,815)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
InterPro :
IPR001537 : tRNA/rRNA methyltransferase, SpoU type
IPR013123 : RNA 2-O ribose methyltransferase, substrate binding
IPR029026 : tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 : Alpha/beta knot methyltransferases
IPR029064 : 50S ribosomal protein L30e-like
GO :
0003723 : Molecular Function : RNA binding
0006396 : Biological Process : RNA processing
0008168 : Molecular Function : methyltransferase activity
0008173 : Molecular Function : RNA methyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013392)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK014739
Danio
sp. (Zebrafish) : BC093318
Bos
sp. (Cow) : ENSBTAT00000046591
Canis
sp. (Dog) : ENSCAFT00000030363
Equus
sp. (Horse) : ENSECAT00000026239
Oryzias
sp. (Medaka) : ENSORLT00000005907
Pongo
sp. (Orangutan) : ENSPPYT00000009103
Tetraodon
sp. (Tetraodon) : GSTENT00030099001
Takifugu
sp. (Fugu) : SINFRUT00000156385
Macaca
sp. (Macaque) : XM_001084984
Monodelphis
sp. (Opossum) : XM_001370260
Gallus
sp. (Chicken) : XM_415864
Pan
sp. (Chimpanzee) : XR_024258
HIX0013392
HIT000206979 (
NM_018146
)
(RNA methyltransferase-like protein 1; EC=2.1.1.-;)
genome : 685,513 - 695,741 (10,229)
query : 1 - 1,801 (1,801/1,815)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013392)
HIX0013392
HIT000116744 (
ENST00000304478
)
(RNA methyltransferase-like protein 1; EC=2.1.1.-;)
genome : 685,513 - 695,749 (10,237)
query : 1 - 1,809 (1,809/1,809)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013392)
HIX0013392
HIT000330680
(
AK222900
)
(RNA methyltransferase-like protein 1; EC=2.1.1.-;)
genome : 685,593 - 695,749 (10,157)
query : 1 - 1,729 (1,729/1,746)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.1.1.-
InterPro :
IPR001537 : tRNA/rRNA methyltransferase, SpoU type
IPR013123 : RNA 2-O ribose methyltransferase, substrate binding
IPR029026 : tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 : Alpha/beta knot methyltransferases
IPR029064 : 50S ribosomal protein L30e-like
GO :
0003723 : Molecular Function : RNA binding
0006396 : Biological Process : RNA processing
0008168 : Molecular Function : methyltransferase activity
0008173 : Molecular Function : RNA methyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013392)
HIX0013392
HIT000003917
(
AK001443
)
(RNA methyltransferase-like protein 1; EC=2.1.1.-;)
genome : 685,593 - 695,738 (10,146)
query : 1 - 1,718 (1,718/1,718)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013392)
HIX0013392
HIT000687185 (
ENST00000574916
)
(RNA methyltransferase-like protein 1; EC=2.1.1.-;)
genome : 685,598 - 686,757 (1,160)
query : 1 - 770 (770/770)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013392)
HIX0013392
HIT000035282
(
BC011550
)
(RNA methyltransferase-like protein 1; EC=2.1.1.-;)
genome : 685,607 - 695,742 (10,136)
query : 1 - 1,708 (1,708/1,737)
4 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 2.1.1.-
InterPro :
IPR001537 : tRNA/rRNA methyltransferase, SpoU type
IPR013123 : RNA 2-O ribose methyltransferase, substrate binding
IPR029026 : tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 : Alpha/beta knot methyltransferases
IPR029064 : 50S ribosomal protein L30e-like
GO :
0003723 : Molecular Function : RNA binding
0006396 : Biological Process : RNA processing
0008168 : Molecular Function : methyltransferase activity
0008173 : Molecular Function : RNA methyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013392)
HIX0013392
HIT000686840 (
ENST00000574509
)
(RNA methyltransferase-like protein 1; EC=2.1.1.-;)
genome : 685,607 - 695,006 (9,400)
query : 1 - 727 (727/727)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, extr 9, E.R._mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013392)
HIX0013392
HIT000053518
(
BC050614
)
(RNA methyltransferase-like protein 1; EC=2.1.1.-;)
genome : 685,611 - 695,749 (10,139)
query : 1 - 1,711 (1,711/1,770)
4 exons
identity = 0.999
5'(0.997;0.996;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
InterPro :
IPR001537 : tRNA/rRNA methyltransferase, SpoU type
IPR013123 : RNA 2-O ribose methyltransferase, substrate binding
IPR029026 : tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 : Alpha/beta knot methyltransferases
IPR029064 : 50S ribosomal protein L30e-like
GO :
0003723 : Molecular Function : RNA binding
0006396 : Biological Process : RNA processing
0008168 : Molecular Function : methyltransferase activity
0008173 : Molecular Function : RNA methyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013392)
HIX0013392
HIT000384258
(
AK225128
)
(RNA methyltransferase-like protein 1; EC=2.1.1.-;)
genome : 685,612 - 695,741 (10,130)
query : 1 - 1,702 (1,702/1,731)
4 exons
identity = 0.999
5'(0.997;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.1.1.-
InterPro :
IPR001537 : tRNA/rRNA methyltransferase, SpoU type
IPR013123 : RNA 2-O ribose methyltransferase, substrate binding
IPR029026 : tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 : Alpha/beta knot methyltransferases
IPR029064 : 50S ribosomal protein L30e-like
GO :
0003723 : Molecular Function : RNA binding
0006396 : Biological Process : RNA processing
0008168 : Molecular Function : methyltransferase activity
0008173 : Molecular Function : RNA methyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013392)
HIX0013392
HIT000683948 (
ENST00000571157
)
(RNA methyltransferase-like protein 1; EC=2.1.1.-;)
genome : 685,840 - 691,438 (5,599)
query : 1 - 572 (572/572)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013392)
HIX0224704
HIT000686879 (
ENST00000574560
)
(Hypothetical short protein.)
genome : 692,984 - 693,765 (782)
query : 1 - 486 (486/486)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 11.8333, extr 11, cyto_pero 8.5,
nucl 5.5, extr_plas 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224704)
HIX0013393
HIT000018668
(
AK093801
)
Representative transcript
(Conserved hypothetical protein.)
genome : 699,305 - 701,487 (2,183)
query : 1 - 2,183 (2,183/2,183)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, nucl 6, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013393)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001153275
HIX0224236
HIT000684052 (
ENST00000571281
)
(Thioredoxin-like fold domain containing protein.)
genome : 703,628 - 707,224 (3,597)
query : 1 - 1,047 (1,047/1,047)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224236)
HIX0224236
HIT000067402
(
AF086523
)
Representative transcript
(Conserved hypothetical protein.)
genome : 704,007 - 706,954 (2,948)
query : 1 - 398 (398/407)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15.5, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224236)
HIX0224236
HIT000686408 (
ENST00000574018
)
(Thioredoxin-like fold domain containing protein.)
genome : 704,028 - 708,488 (4,461)
query : 1 - 508 (508/508)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 13.5, extr 4, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224236)
HIX0224297
HIT000337784
(
BC104634
)
Representative transcript
(Thioredoxin-like fold domain containing protein.)
genome : 722,368 - 800,254 (77,887)
query : 5 - 904 (900/935)
5 exons
identity = 0.993
3'(0.988;1.000;1.000;1.000;0.992)5'
coverage = 0.993
InterPro :
IPR012336 : Thioredoxin-like fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 7.83333, cyto_pero 7, cyto 6.5,
extr 6, pero 5.5, E.R._mito 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224297)
HIX0224297
HIT000687654 (
ENST00000575455
)
(Thioredoxin-like fold domain containing protein.)
genome : 722,354 - 800,254 (77,901)
query : 1 - 914 (914/914)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 7.83333, cyto_pero 7, cyto 6.5,
extr 6, pero 5.5, E.R._mito 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224297)
HIX0224297
HIT000689065 (
ENST00000577098
)
(Thioredoxin-like fold domain containing protein.)
genome : 726,886 - 811,274 (84,389)
query : 1 - 659 (659/659)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, extr 11, cyto_nucl 11, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224297)
HIX0224297
HIT000684101 (
ENST00000571338
)
(Thioredoxin-like fold domain containing protein.)
genome : 726,927 - 833,291 (106,365)
query : 1 - 586 (586/586)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 12, extr 5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224297)
HIX0224297
HIT000687404 (
ENST00000575171
)
(Thioredoxin-like fold domain containing protein.)
genome : 728,806 - 882,589 (153,784)
query : 1 - 544 (544/544)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224297)
HIX0224689
HIT000686287 (
ENST00000573877
)
(Hypothetical short protein.)
genome : 781,142 - 783,333 (2,192)
query : 1 - 585 (585/585)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 5, nucl 3.5, cyto 3.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224689)
HIX0195449
pHIT000027985 ( pHIT000027985 )
Representative transcript
(Conserved hypothetical protein.)
genome : 796,727 - 798,034 (1,308)
query : 1 - 1,308 (1,308/1,308)
1 exon
InterPro :
IPR027512 : Eukaryotic translation initiation factor 3 subunit A
GO :
0005852 : Cellular Component : eukaryotic translation initiation factor 3 complex
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195449)
CAGE tag :
H06BA47K0902
HIX0194979
HIT000688337 (
ENST00000576252
)
(Conserved hypothetical protein.)
genome : 812,872 - 814,452 (1,581)
query : 1 - 820 (820/820)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194979)
HIX0194979
pHIT000091530 ( pHIT000091530 )
Representative transcript
(Conserved hypothetical protein.)
genome : 813,082 - 857,925 (44,844)
query : 1 - 2,517 (2,517/2,517)
5 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194979)
CAGE tag :
H06BA47K0902
HIX0194979
pHIT000116270 ( pHIT000116270 )
(Conserved hypothetical protein.)
genome : 813,082 - 824,769 (11,688)
query : 1 - 354 (354/354)
4 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194979)
CAGE tag :
T17F000B9814
HIX0224297
HIT000688974 (
ENST00000576991
)
(Conserved hypothetical protein.)
genome : 833,196 - 836,653 (3,458)
query : 1 - 545 (545/545)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224297)
HIX0027302
HIT000049549
(
AK130278
)
Representative transcript
(Conserved hypothetical protein.)
genome : 843,493 - 846,369 (2,877)
query : 9 - 2,201 (2,193/2,201)
4 exons
identity = 0.979
3'(0.996;0.957;0.997;0.969)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, nucl 14, cyto 13, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027302)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000009105
Pan
sp. (Chimpanzee) : ENSPTRT00000015707
HIX0224627
HIT000683417 (
ENST00000570544
)
(Conserved hypothetical protein.)
genome : 862,274 - 862,606 (333)
query : 1 - 333 (333/333)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 13.5, extr 10, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224627)
HIX0224297
HIT000683876 (
ENST00000571080
)
(Hypothetical short protein.)
genome : 881,539 - 882,702 (1,164)
query : 1 - 476 (476/476)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12, mito 7, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224297)
HIX0224297
pHIT000027988 ( pHIT000027988 )
(Hypothetical protein.)
genome : 881,941 - 882,918 (978)
query : 1 - 738 (738/738)
2 exons
InterPro :
IPR012336 : Thioredoxin-like fold
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224297)
CAGE tag :
H06BA47K0902
HIX0017440
HIT000030799
(
BC002324
)
Representative transcript
(Mitochondrial import inner membrane translocase subunit Tim22; Testis-expressed sequence 4;)
genome : 900,357 - 905,389 (5,033)
query : 1 - 1,672 (1,672/1,691)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003397 : Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13, extr 6, plas 5, nucl 4, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017440)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF223951
Mus
sp. (Mouse) : AK153837
Bos
sp. (Cow) : BT021190
Gallus
sp. (Chicken) : BX935303
Tetraodon
sp. (Tetraodon) : CR684633
Equus
sp. (Horse) : ENSECAT00000025623
Oryzias
sp. (Medaka) : ENSORLT00000013863
Pongo
sp. (Orangutan) : ENSPPYT00000009106
Takifugu
sp. (Fugu) : SINFRUT00000129414
Macaca
sp. (Macaque) : XM_001117224
Pan
sp. (Chimpanzee) : XM_001153337
Monodelphis
sp. (Opossum) : XM_001364461
Canis
sp. (Dog) : XM_537758
HIX0017440
HIT000204313 (
NM_013337
)
(Mitochondrial import inner membrane translocase subunit Tim22; Testis-expressed sequence 4;)
genome : 900,357 - 905,389 (5,033)
query : 1 - 1,672 (1,672/1,691)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13, extr 6, plas 5, nucl 4, E.R. 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017440)
HIX0017440
HIT000124860 (
ENST00000327158
)
(Mitochondrial import inner membrane translocase subunit Tim22; Testis-expressed sequence 4;)
genome : 900,357 - 905,389 (5,033)
query : 1 - 1,672 (1,672/1,690)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13, extr 6, plas 5, nucl 4, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017440)
HIX0017440
HIT000384583
(
AK225453
)
(Mitochondrial import inner membrane translocase subunit Tim22; Testis-expressed sequence 4;)
genome : 900,376 - 905,388 (5,013)
query : 1 - 1,541 (1,541/1,560)
5 exons
identity = 0.999
5'(1.000;0.995;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR003397 : Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, extr 6, cyto_golg 6, plas 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017440)
HIX0017440
HIT000003305
(
AK000830
)
(Mitochondrial import inner membrane translocase subunit Tim22; Testis-expressed sequence 4;)
genome : 900,376 - 905,386 (5,011)
query : 1 - 1,651 (1,651/1,651)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13, extr 6, plas 5, nucl 4, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017440)
HIX0017440
HIT000071942
(
AF155330
)
(Mitochondrial import inner membrane translocase subunit Tim22; Testis-expressed sequence 4;)
genome : 900,378 - 905,388 (5,011)
query : 1 - 1,650 (1,650/1,669)
4 exons
identity = 0.992
5'(1.000;0.980;0.946;0.996)3'
coverage = 0.999
InterPro :
IPR003397 : Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, extr 6, cyto_golg 6, nucl 5, extr_plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017440)
HIX0224146
HIT000094622
(
BC036807
)
(Hypothetical protein.)
genome : 906,759 - 1,012,331 (105,573)
query : 1 - 1,532 (1,532/1,581)
2 exons
identity = 0.995
3'(1.000;0.938)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224146)
HIX0224146
HIT000019399
(
AK094544
)
(Conserved hypothetical protein.)
genome : 906,759 - 909,057 (2,299)
query : 1 - 2,297 (2,297/2,312)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224146)
HIX0224146
HIT000723897 (
NM_001256847
)
(Rho GTPase-activating protein domain containing protein.)
genome : 906,758 - 935,078 (28,321)
query : 1 - 3,592 (3,592/3,598)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 17.5, nucl 11.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224146)
HIX0224146
HIT000047724
(
AK127851
)
(Active breakpoint cluster region-related protein;)
genome : 906,767 - 915,829 (9,063)
query : 1 - 3,775 (3,775/3,775)
5 exons
identity = 0.998
3'(0.998;1.000;0.991;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224146)
HIX0224146
HIT000685177 (
ENST00000572585
)
(Rho GTPase-activating protein domain containing protein.)
genome : 906,767 - 915,829 (9,063)
query : 1 - 3,776 (3,776/3,776)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224146)
HIX0224146
HIT000685058 (
ENST00000572441
)
(Rho GTPase-activating protein domain containing protein.)
genome : 908,250 - 935,042 (26,793)
query : 1 - 563 (563/563)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224146)
HIX0224146
HIT000435237
(
BC141909
)
(Conserved hypothetical protein.)
genome : 908,300 - 908,872 (573)
query : 3 - 574 (572/580)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 0.986
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224146)
HIX0224146
HIT000684494 (
ENST00000571797
)
(Rho GTPase-activating protein domain containing protein.)
genome : 908,975 - 915,160 (6,186)
query : 1 - 850 (850/850)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 15, nucl 5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224146)
HIX0224146
HIT000642255 (
ENST00000543210
)
(Rho GTPase-activating protein domain containing protein.)
genome : 909,301 - 935,078 (25,778)
query : 1 - 1,049 (1,049/1,049)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 17.5, nucl 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224146)
HIX0224146
HIT000494960
(
AK300336
)
Representative transcript
(Active breakpoint cluster region-related protein isoform d.)
genome : 909,301 - 935,062 (25,762)
query : 1 - 1,033 (1,033/1,033)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.991;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 17.5, nucl 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224146)
HIX0224146
HIT000686015 (
ENST00000573559
)
(Rho GTPase-activating protein domain containing protein.)
genome : 909,358 - 914,628 (5,271)
query : 1 - 685 (685/685)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 13.5, nucl 12.5, extr 2, mito 2,
pero 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224146)
HIX0224146
HIT000685230 (
ENST00000572650
)
(Rho GTPase-activating protein domain containing protein.)
genome : 910,478 - 914,036 (3,559)
query : 1 - 553 (553/553)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 14, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224146)
HIX0224146
HIT000683541 (
ENST00000570688
)
(Rho GTPase-activating protein domain containing protein.)
genome : 910,509 - 913,453 (2,945)
query : 1 - 579 (579/579)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 11.5, extr 10, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224146)
HIX0224146
HIT000683915 (
ENST00000571120
)
(Rho GTPase-activating protein domain containing protein.)
genome : 912,949 - 916,434 (3,486)
query : 1 - 551 (551/551)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 16.1667, cyto_plas 11.3333,
nucl 6.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224146)
HIX0224146
HIT000684141 (
ENST00000571383
)
(Rho GTPase-activating protein domain containing protein.)
genome : 912,956 - 916,386 (3,431)
query : 1 - 557 (557/557)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224146)
HIX0224146
HIT000683827 (
ENST00000571022
)
(Rho GTPase-activating protein domain containing protein.)
genome : 912,978 - 942,837 (29,860)
query : 1 - 551 (551/551)
6 exons
identity = 0.993
3'(1.000;1.000;1.000;1.000;1.000;0.937)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 18.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224146)
HIX0224146
HIT000689023 (
ENST00000577052
)
(Rho GTPase-activating protein domain containing protein.)
genome : 914,816 - 935,058 (20,243)
query : 1 - 617 (617/617)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15.5, nucl 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224146)
HIX0224146
HIT000688695 (
ENST00000576668
)
(Conserved hypothetical protein.)
genome : 915,636 - 935,058 (19,423)
query : 1 - 553 (553/553)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224146)
HIX0212592
HIT000659411 (
NR_036148
)
(Non-protein coding transcript.)
genome : 925,716 - 925,799 (84)
query : 1 - 84 (84/84)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212592)
HIX0212592
HIT000690508 (
ENST00000578566
)
(Non-protein coding transcript.)
genome : 925,716 - 925,799 (84)
query : 1 - 84 (84/84)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212592)
HIX0202632
HIT000687149 (
ENST00000574875
)
(C2 domain containing protein.)
genome : 953,220 - 953,813 (594)
query : 1 - 239 (239/239)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 15.5, nucl 6, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202632)
HIX0202632
HIT000687918 (
ENST00000575770
)
(C2 domain containing protein.)
genome : 953,290 - 961,287 (7,998)
query : 1 - 614 (614/614)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10.5, nucl 8.5, extr 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202632)
HIX0202632
HIT000688954 (
ENST00000576964
)
(Dbl homology (DH) domain containing protein.)
genome : 953,334 - 986,830 (33,497)
query : 1 - 574 (574/574)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202632)
HIX0202632
HIT000686865 (
ENST00000574544
)
(Pleckstrin homology domain containing protein.)
genome : 953,794 - 970,487 (16,694)
query : 10 - 566 (557/566)
5 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.994)5'
coverage = 0.984
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 7, mito 4, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202632)
HIX0202632
HIT000686302 (
ENST00000573895
)
(Pleckstrin homology domain containing protein.)
genome : 958,523 - 961,287 (2,765)
query : 1 - 1,010 (1,010/1,010)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13, nucl 8, extr 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202632)
HIX0202632
HIT000426693
(
AK307827
)
Representative transcript
(Dbl homology (DH) domain containing protein.)
genome : 970,321 - 1,029,090 (58,770)
query : 1 - 1,504 (1,504/1,504)
9 exons
identity = 0.998
3'(0.994;1.000;1.000;1.000;0.984;0.991;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000219 : Dbl homology (DH) domain
IPR001331 : Guanine-nucleotide dissociation stimulator, CDC24, conserved site
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0035023 : Biological Process : regulation of Rho protein signal transduction
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202632)
HIX0202632
HIT000684627 (
ENST00000571945
)
(Dbl homology (DH) domain containing protein.)
genome : 970,357 - 982,362 (12,006)
query : 1 - 760 (760/760)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 8, nucl 5, mito 4, cyto_pero 4,
cyto_plas 4, cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202632)
HIX0202632
HIT000686105 (
ENST00000573667
)
(Dbl homology (DH) domain containing protein.)
genome : 973,278 - 987,011 (13,734)
query : 1 - 560 (560/560)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12, extr 9, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202632)
HIX0202632
HIT000683329 (
ENST00000570441
)
(Dbl homology (DH) domain containing protein.)
genome : 975,973 - 1,018,676 (42,704)
query : 1 - 690 (690/690)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13, nucl 6.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202632)
HIX0202632
HIT000685812 (
ENST00000573325
)
(Dbl homology (DH) domain containing protein.)
genome : 986,526 - 995,016 (8,491)
query : 1 - 454 (454/471)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 14.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202632)
HIX0202632
HIT000688060 (
ENST00000575934
)
(Dbl homology (DH) domain containing protein.)
genome : 986,762 - 1,132,298 (145,537)
query : 1 - 689 (689/689)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 16.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202632)
HIX0202632
HIT000686515 (
ENST00000574139
)
(Dbl homology (DH) domain containing protein.)
genome : 994,909 - 1,132,298 (137,390)
query : 1 - 678 (678/678)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202632)
HIX0202632
HIT000683401 (
ENST00000570525
)
(Conserved hypothetical protein.)
genome : 995,032 - 1,029,880 (34,849)
query : 1 - 549 (549/549)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 16.5, nucl 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202632)
HIX0202632
HIT000686630 (
ENST00000574266
)
(Conserved hypothetical protein.)
genome : 995,039 - 1,083,078 (88,040)
query : 1 - 597 (597/597)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202632)
HIX0202632
HIT000686939 (
ENST00000574632
)
(Hypothetical short protein.)
genome : 1,028,659 - 1,058,101 (29,443)
query : 1 - 538 (538/538)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202632)
HIX0194980
pHIT000028000 ( pHIT000028000 )
Representative transcript
(Hypothetical protein.)
genome : 1,051,130 - 1,077,202 (26,073)
query : 1 - 399 (399/399)
4 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194980)
CAGE tag :
H05BB28K0504
HIX0202632
HIT000686435 (
ENST00000574048
)
(Hypothetical short protein.)
genome : 1,057,099 - 1,058,245 (1,147)
query : 1 - 567 (567/567)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202632)
HIX0202632
HIT000684075 (
ENST00000571306
)
(Hypothetical short protein.)
genome : 1,057,106 - 1,057,912 (807)
query : 1 - 501 (501/501)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202632)
HIX0202632
pHIT000027999 ( pHIT000027999 )
(Hypothetical protein.)
genome : 1,057,465 - 1,089,894 (32,430)
query : 1 - 429 (429/429)
5 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202632)
CAGE tag :
H27BA59H0707
HIX0202632
pHIT000116283 ( pHIT000116283 )
(Hypothetical protein.)
genome : 1,081,339 - 1,132,924 (51,586)
query : 1 - 669 (669/669)
6 exons
InterPro :
IPR015123 : Bcr-Abl oncoprotein oligomerisation
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005096 : Molecular Function : GTPase activator activity
0006468 : Biological Process : protein phosphorylation
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202632)
CAGE tag :
T17R00107CA7
HIX0174070
HIT000536278 (
ENST00000438344
)
(Hypothetical short protein.)
genome : 1,085,187 - 1,088,380 (3,194)
query : 1 - 235 (235/235)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174070)
HIX0202632
HIT000010062
(
AK026788
)
(Conserved hypothetical protein.)
genome : 1,129,187 - 1,131,376 (2,190)
query : 1 - 2,193 (2,193/2,216)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 7, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202632)
HIX0202632
pHIT000028001 ( pHIT000028001 )
(Non-protein coding transcript.)
genome : 1,131,183 - 1,132,924 (1,742)
query : 1 - 498 (498/498)
4 exons
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202632)
CAGE tag :
H05BB28K0504
HIX0202632
HIT000684273 (
ENST00000571543
)
(Non-protein coding transcript.)
genome : 1,131,438 - 1,132,315 (878)
query : 1 - 384 (384/384)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202632)
HIX0224721
HIT000688040 (
ENST00000575911
)
(Hypothetical short protein.)
genome : 1,145,233 - 1,157,294 (12,062)
query : 1 - 340 (340/340)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, extr 8, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224721)
HIX0202615
HIT000474952 (
ENST00000391429
)
(Myc-type, basic helix-loop-helix (bHLH) domain containing protein.)
genome : 1,173,853 - 1,174,754 (902)
query : 1 - 902 (902/902)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 13.5, extr 7, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202615)
HIX0202615
HIT000653975 (
NM_001164405
)
(Myc-type, basic helix-loop-helix (bHLH) domain containing protein.)
genome : 1,173,858 - 1,174,565 (708)
query : 1 - 708 (708/708)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 13.5, extr 7, cyto 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202615)
HIX0202571
HIT000014431
(
AK057824
)
Representative transcript
(Conserved hypothetical protein.)
genome : 1,174,997 - 1,176,777 (1,781)
query : 1 - 1,781 (1,781/1,781)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 12.5, cyto 9.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202571)
HIX0013398
HIT000061473
(
AB090231
)
(Tumor suppressor candidate 5; Dispanin subfamily B member 1; DSPB1; Interferon-induced transmembrane domain-containing protein D3; Protein located at seventeen-p-thirteen point three 1;)
genome : 1,182,957 - 1,204,281 (21,325)
query : 1 - 3,596 (3,596/3,616)
3 exons
identity = 0.997
5'(0.996;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR007593 : CD225/Dispanin family
GO :
0009607 : Biological Process : response to biotic stimulus
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, mito 3, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013398)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB218813
Mus
sp. (Mouse) : AK048522
Bos
sp. (Cow) : BC134530
Gallus
sp. (Chicken) : ENSGALT00000039571
Oryzias
sp. (Medaka) : ENSORLT00000010305
Pongo
sp. (Orangutan) : ENSPPYT00000009110
Tetraodon
sp. (Tetraodon) : GSTENT00012359001
Tetraodon
sp. (Tetraodon) : GSTENT00038234001
Takifugu
sp. (Fugu) : SINFRUT00000136089
Pan
sp. (Chimpanzee) : XM_001153397
Monodelphis
sp. (Opossum) : XM_001369942
Equus
sp. (Horse) : XM_001502125
Canis
sp. (Dog) : XM_548306
Danio
sp. (Zebrafish) : XM_683807
HIX0013398
HIT000128568 (
ENST00000333813
)
(Tumor suppressor candidate 5; Dispanin subfamily B member 1; DSPB1; Interferon-induced transmembrane domain-containing protein D3; Protein located at seventeen-p-thirteen point three 1;)
genome : 1,182,957 - 1,204,281 (21,325)
query : 1 - 3,596 (3,596/3,596)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, lyso 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013398)
HIX0013398
HIT000214741 (
NM_172367
)
(Tumor suppressor candidate 5; Dispanin subfamily B member 1; DSPB1; Interferon-induced transmembrane domain-containing protein D3; Protein located at seventeen-p-thirteen point three 1;)
genome : 1,182,957 - 1,204,281 (21,325)
query : 1 - 3,596 (3,596/3,596)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, lyso 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013398)
HIX0013398
HIT000435318
(
BC142615
)
(Tumor suppressor candidate 5.)
genome : 1,182,973 - 1,204,275 (21,303)
query : 1 - 3,574 (3,574/3,680)
3 exons
identity = 0.998
5'(0.993;0.992;1.000)3'
coverage = 1.000
InterPro :
IPR007593 : CD225/Dispanin family
GO :
0009607 : Biological Process : response to biotic stimulus
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, mito 3, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013398)
HIX0013398
HIT000026841
(
AL831929
)
Representative transcript
(Tumor suppressor candidate 5.)
genome : 1,183,473 - 1,204,272 (20,800)
query : 1 - 2,983 (2,983/2,999)
4 exons
identity = 0.999
5'(1.000;1.000;0.999;0.999)3'
coverage = 1.000
InterPro :
IPR007593 : CD225/Dispanin family
GO :
0009607 : Biological Process : response to biotic stimulus
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013398)
HIX0013397
HIT000109272 (
ENST00000264335
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,247,566 - 1,303,672 (56,107)
query : 1 - 2,211 (2,211/2,211)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 15.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000030416
(
BC001440
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,247,844 - 1,303,482 (55,639)
query : 1 - 1,744 (1,744/1,774)
6 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000308 : 14-3-3 protein
IPR023409 : 14-3-3 protein, conserved site
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 15.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000029410
(
BC000179
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,247,835 - 1,303,436 (55,602)
query : 1 - 1,707 (1,707/1,723)
6 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000308 : 14-3-3 protein
IPR023409 : 14-3-3 protein, conserved site
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 15.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000570888_02 (
ENST00000466227
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,247,833 - 1,268,352 (20,520)
query : 1 - 1,377 (1,377/1,377)
4 exons
identity = 0.997
3'(1.000;1.000;0.952;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 17, cyto_plas 15.1667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000203335 (
NM_006761
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,247,834 - 1,303,556 (55,723)
query : 1 - 1,827 (1,827/1,827)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 15.5, nucl 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000562317 (
NR_024058
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,247,834 - 1,303,556 (55,723)
query : 1 - 1,860 (1,860/1,860)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 15, nucl 4, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000684437 (
ENST00000571732
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,247,834 - 1,303,514 (55,681)
query : 1 - 1,818 (1,818/1,818)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 15, nucl 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000332488
(
AY883089
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,247,834 - 1,303,483 (55,650)
query : 1 - 1,787 (1,787/1,787)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000308 : 14-3-3 protein
IPR023409 : 14-3-3 protein, conserved site
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 15, nucl 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000048658
(
AK128785
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,247,838 - 1,303,514 (55,677)
query : 1 - 1,780 (1,780/1,780)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000308 : 14-3-3 protein
IPR023409 : 14-3-3 protein, conserved site
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 15.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000219858
(
U43430
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,247,840 - 1,303,464 (55,625)
query : 1 - 1,703 (1,703/1,705)
7 exons
identity = 0.992
3'(0.997;0.985;1.000;1.000;0.991;0.995;0.984)5'
coverage = 0.999
InterPro :
IPR000308 : 14-3-3 protein
IPR023409 : 14-3-3 protein, conserved site
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 15.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000219855
(
U43399
)
Representative transcript
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,247,840 - 1,303,464 (55,625)
query : 1 - 1,703 (1,703/1,704)
7 exons
identity = 0.992
3'(0.997;0.985;1.000;1.000;0.991;0.995;0.984)5'
coverage = 0.999
InterPro :
IPR000308 : 14-3-3 protein
IPR023409 : 14-3-3 protein, conserved site
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 15.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK075995
Danio
sp. (Zebrafish) : BC090759
Bos
sp. (Cow) : BC102928
Tetraodon
sp. (Tetraodon) : CR721813
Oryzias
sp. (Medaka) : ENSORLT00000012247
Pongo
sp. (Orangutan) : ENSPPYT00000009111
Takifugu
sp. (Fugu) : SINFRUT00000144697
Rattus
sp. (Rat) : U53882
Macaca
sp. (Macaque) : XM_001117283
Pan
sp. (Chimpanzee) : XM_001153712
Equus
sp. (Horse) : XM_001504287
Canis
sp. (Dog) : XM_537764
Monodelphis
sp. (Opossum) : XR_030223
HIX0013397
HIT000220325
(
U54778
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,247,845 - 1,303,464 (55,620)
query : 1 - 1,726 (1,726/1,726)
6 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000308 : 14-3-3 protein
IPR023409 : 14-3-3 protein, conserved site
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 15.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000685558 (
ENST00000573026
)
(Conserved hypothetical protein.)
genome : 1,248,149 - 1,303,475 (55,327)
query : 1 - 780 (780/780)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, nucl 9, cyto_nucl 8.5, extr 7, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000499798
(
AK316185
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,248,232 - 1,303,514 (55,283)
query : 1 - 1,420 (1,420/1,420)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000308 : 14-3-3 protein
IPR023409 : 14-3-3 protein, conserved site
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 15, nucl 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000499814
(
AK316201
)
(14-3-3 protein 2;)
genome : 1,248,233 - 1,303,514 (55,282)
query : 1 - 1,231 (1,231/1,231)
6 exons
identity = 0.991
3'(1.000;1.000;1.000;1.000;0.780;1.000)5'
coverage = 1.000
InterPro :
IPR000308 : 14-3-3 protein
IPR023409 : 14-3-3 protein, conserved site
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12.5, nucl 6.5, mito 5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000489884
(
AK295260
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,248,233 - 1,303,494 (55,262)
query : 2 - 1,299 (1,298/1,299)
6 exons
identity = 0.992
3'(0.995;1.000;1.000;1.000;0.990;0.920)5'
coverage = 0.999
InterPro :
IPR000308 : 14-3-3 protein
IPR023409 : 14-3-3 protein, conserved site
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 15.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000600014 (
ENST00000496706
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,248,449 - 1,264,588 (16,140)
query : 1 - 732 (732/732)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 12, cyto 11, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000218576
(
U20972
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,248,547 - 1,303,481 (54,935)
query : 9 - 1,045 (1,037/1,045)
6 exons
identity = 0.993
3'(0.992;0.993;1.000;0.991;0.995;0.986)5'
coverage = 1.000
InterPro :
IPR000308 : 14-3-3 protein
IPR023409 : 14-3-3 protein, conserved site
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 15.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000490674
(
AK296050
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,248,552 - 1,303,500 (54,949)
query : 1 - 741 (741/741)
4 exons
identity = 0.997
3'(0.992;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000308 : 14-3-3 protein
IPR023409 : 14-3-3 protein, conserved site
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 17, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000685702 (
ENST00000573196
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,248,552 - 1,303,500 (54,949)
query : 1 - 739 (739/739)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 17, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000688097 (
ENST00000575977
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,248,622 - 1,303,508 (54,887)
query : 1 - 540 (540/540)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13.5, cyto 13.5, plas 2, cysk 2,
cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000490621
(
AK295997
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,248,698 - 1,303,500 (54,803)
query : 2 - 880 (879/880)
6 exons
identity = 0.995
3'(1.000;1.000;1.000;0.964;0.995;1.000)5'
coverage = 0.999
InterPro :
IPR000308 : 14-3-3 protein
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 15.5, nucl 6, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000218940
(
U28936
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,248,717 - 1,303,404 (54,688)
query : 1 - 792 (792/792)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000308 : 14-3-3 protein
IPR023409 : 14-3-3 protein, conserved site
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 15.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000100081
(
BT007161
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,248,743 - 1,303,404 (54,662)
query : 1 - 766 (766/768)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR000308 : 14-3-3 protein
IPR023409 : 14-3-3 protein, conserved site
IPR023410 : 14-3-3 domain
GO :
0019904 : Molecular Function : protein domain specific binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 15.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000527823_03 (
ENST00000429889
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,248,744 - 1,268,350 (19,607)
query : 1 - 699 (699/699)
5 exons
identity = 0.960
3'(0.960;0.942;0.961;0.963;0.970)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 16.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0039668
HIT000217407
(
U00962
)
Representative transcript
(Non-protein coding transcript.)
genome : 1,255,364 - 1,255,549 (186)
query : 1 - 186 (186/186)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039668)
HIX0013397
HIT000573921 (
ENST00000469398
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,264,965 - 1,303,445 (38,481)
query : 1 - 676 (676/676)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 20.6667, cyto 18, cyto_plas 11.6667, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000590003 (
ENST00000486241
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,264,975 - 1,303,503 (38,529)
query : 1 - 691 (691/691)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 3, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000592894 (
ENST00000489287
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,268,042 - 1,303,494 (35,453)
query : 1 - 465 (465/465)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, extr 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000491179
(
AK296555
)
(Conserved hypothetical protein.)
genome : 1,302,127 - 1,303,500 (1,374)
query : 1 - 1,374 (1,374/1,374)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.6667, nucl 10.5, cyto 7.5, mito 7,
cyto_pero 5.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000688858 (
ENST00000576854
)
(Conserved hypothetical protein.)
genome : 1,302,127 - 1,303,500 (1,374)
query : 1 - 1,374 (1,374/1,374)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.6667, nucl 10.5, cyto 7.5, mito 7,
cyto_pero 5.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000684771 (
ENST00000572108
)
(Hypothetical short protein.)
genome : 1,302,172 - 1,302,883 (712)
query : 1 - 258 (258/258)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 4.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013397
HIT000601856 (
ENST00000498643
)
(14-3-3 protein epsilon; 14-3-3E;)
genome : 1,302,338 - 1,303,429 (1,092)
query : 1 - 312 (312/312)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 8, cyto_pero 8, cyto_plas 8,
cyto_golg 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013397)
HIX0013396
HIT000115658 (
ENST00000300574
)
(Adapter molecule crk; Proto-oncogene c-Crk; p38;)
genome : 1,323,983 - 1,359,552 (35,570)
query : 1 - 3,880 (3,880/3,880)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, cyto 15.5, nucl 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013396)
HIX0013396
HIT000482093 (
ENST00000398970
)
(Adapter molecule crk isoform b.)
genome : 1,323,983 - 1,359,517 (35,535)
query : 1 - 3,675 (3,675/3,675)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 16, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013396)
HIX0013396
HIT000020304
(
AK095449
)
(Conserved hypothetical protein.)
genome : 1,324,019 - 1,326,183 (2,165)
query : 1 - 2,163 (2,163/2,163)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, cyto 9.5, cyto_nucl 9.5, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013396)
HIX0013396
HIT000201913 (
NM_005206
)
(Adapter molecule crk isoform b.)
genome : 1,324,647 - 1,359,561 (34,915)
query : 1 - 3,055 (3,055/3,055)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 16, cyto 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013396)
HIX0013396
HIT000206336 (
NM_016823
)
(Adapter molecule crk; Proto-oncogene c-Crk; p38;)
genome : 1,324,647 - 1,359,561 (34,915)
query : 1 - 3,225 (3,225/3,225)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, cyto 15.5, nucl 14.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013396)
HIX0013396
HIT000033838
(
BC008506
)
Representative transcript
(Adapter molecule crk; Proto-oncogene c-Crk; p38;)
genome : 1,325,475 - 1,359,544 (34,070)
query : 1 - 2,380 (2,380/2,431)
3 exons
identity = 1.000
3'(1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
IPR001452 : SH3 domain
IPR011511 : Variant SH3 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, cyto 15.5, nucl 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013396)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB170172
Mus
sp. (Mouse) : AK163291
Danio
sp. (Zebrafish) : BC077088
Rattus
sp. (Rat) : D44481
Gallus
sp. (Chicken) : ENSGALT00000004183
Oryzias
sp. (Medaka) : ENSORLT00000012263
Pongo
sp. (Orangutan) : ENSPPYT00000009112
Tetraodon
sp. (Tetraodon) : GSTENT00002027001
Tetraodon
sp. (Tetraodon) : GSTENT00002679001
Tetraodon
sp. (Tetraodon) : GSTENT00026698001
Takifugu
sp. (Fugu) : SINFRUT00000150362
Takifugu
sp. (Fugu) : SINFRUT00000175602
Pan
sp. (Chimpanzee) : XM_001154201
Monodelphis
sp. (Opossum) : XM_001364945
Equus
sp. (Horse) : XM_001918347
Canis
sp. (Dog) : XM_537765
Bos
sp. (Cow) : XM_590426
HIX0013396
HIT000034609
(
BC009837
)
(Adapter molecule crk isoform b.)
genome : 1,325,475 - 1,359,517 (34,043)
query : 10 - 2,193 (2,184/2,229)
3 exons
identity = 1.000
3'(0.999;1.000;1.000)5'
coverage = 0.996
InterPro :
IPR000980 : SH2 domain
IPR001452 : SH3 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 16, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013396)
HIX0013396
HIT000258884
(
BC001718
)
(Adapter molecule crk; Proto-oncogene c-Crk; p38;)
genome : 1,325,475 - 1,359,513 (34,039)
query : 1 - 2,349 (2,349/2,382)
3 exons
identity = 1.000
3'(1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
IPR001452 : SH3 domain
IPR011511 : Variant SH3 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, cyto 15.5, nucl 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013396)
HIX0013396
HIT000686657 (
ENST00000574295
)
(Adapter molecule crk; Proto-oncogene c-Crk; p38;)
genome : 1,325,520 - 1,359,443 (33,924)
query : 1 - 1,391 (1,391/1,391)
3 exons
identity = 0.998
3'(1.000;0.982;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 15.5, nucl 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013396)
HIX0013396
HIT000423857
(
AK291060
)
(Adapter molecule crk isoform b.)
genome : 1,326,087 - 1,359,526 (33,440)
query : 1 - 1,580 (1,580/1,580)
3 exons
identity = 0.999
3'(1.000;0.997;1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
IPR001452 : SH3 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 16, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013396)
HIX0013396
HIT000100435
(
D10656
)
(Adapter molecule crk; Proto-oncogene c-Crk; p38;)
genome : 1,326,277 - 1,359,509 (33,233)
query : 8 - 1,553 (1,546/1,553)
3 exons
identity = 0.990
3'(0.987;0.989;0.997)5'
coverage = 0.995
InterPro :
IPR000980 : SH2 domain
IPR001452 : SH3 domain
IPR011511 : Variant SH3 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, cyto 15.5, nucl 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013396)
HIX0013396
HIT000684801 (
ENST00000572145
)
(Adapter molecule crk; Proto-oncogene c-Crk; p38;)
genome : 1,326,691 - 1,366,456 (39,766)
query : 1 - 830 (830/830)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013396)
HIX0013396
HIT000100197
(
BT007277
)
(Adapter molecule crk; Proto-oncogene c-Crk; p38;)
genome : 1,326,809 - 1,359,411 (32,603)
query : 1 - 913 (913/915)
3 exons
identity = 0.999
3'(1.000;1.000;0.996)5'
coverage = 0.998
InterPro :
IPR000980 : SH2 domain
IPR001452 : SH3 domain
IPR011511 : Variant SH3 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, cyto 15.5, nucl 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013396)
HIX0224370
HIT000683746 (
ENST00000570924
)
(Conserved hypothetical protein.)
genome : 1,327,767 - 1,329,657 (1,891)
query : 1 - 570 (570/570)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 3, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224370)
HIX0224370
HIT000688833 (
ENST00000576825
)
(Conserved hypothetical protein.)
genome : 1,328,070 - 1,329,778 (1,709)
query : 1 - 322 (322/322)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 3, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224370)
HIX0202539
HIT000313267 (
ENST00000359786
)
(Unconventional myosin-Ic; Myosin I beta; MMI-beta; MMIb;)
genome : 1,367,392 - 1,396,106 (28,715)
query : 1 - 5,145 (5,145/5,145)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 6, extr 3, mito 3, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000398143 (
NM_001080779
)
(Unconventional myosin-Ic; Myosin I beta; MMI-beta; MMIb;)
genome : 1,367,481 - 1,396,001 (28,521)
query : 1 - 4,951 (4,951/4,973)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 6, extr 3, mito 3, cysk 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000211314 (
NM_033375
)
(Unconventional myosin-Ic isoform c.)
genome : 1,367,481 - 1,394,972 (27,492)
query : 1 - 4,735 (4,735/4,757)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12.5, nucl 9.5, pero 3, extr 2,
mito_pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000398167 (
NM_001080950
)
(Unconventional myosin-Ic isoform c.)
genome : 1,367,481 - 1,389,051 (21,571)
query : 1 - 4,720 (4,720/4,742)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 13, nucl 12, extr 2, pero 2,
cysk 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000687394 (
ENST00000575158
)
(Unconventional myosin-Ic isoform c.)
genome : 1,367,480 - 1,389,495 (22,016)
query : 1 - 4,804 (4,804/4,804)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12.5, nucl 9.5, pero 3, extr 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000536599 (
ENST00000438665
)
(Unconventional myosin-Ic isoform b.)
genome : 1,367,480 - 1,389,228 (21,749)
query : 1 - 4,898 (4,898/4,898)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 13, nucl 12, extr 2, pero 2,
cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000314300 (
ENST00000361007
)
(Unconventional myosin-Ic isoform c.)
genome : 1,367,482 - 1,394,972 (27,491)
query : 1 - 4,734 (4,734/4,734)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12.5, nucl 9.5, pero 3, extr 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000262888
(
BC068013
)
Representative transcript
(Unconventional myosin-Ic; Myosin I beta; MMI-beta; MMIb;)
genome : 1,368,124 - 1,395,995 (27,872)
query : 1 - 4,302 (4,302/4,318)
32 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.988;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR001609 : Myosin head, motor domain
IPR010926 : Myosin tail 2
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 6, extr 3, mito 3, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ719828
Mus
sp. (Mouse) : BC021481
Bos
sp. (Cow) : BC140534
Macaca
sp. (Macaque) : ENSMMUT00000003364
Oryzias
sp. (Medaka) : ENSORLT00000011143
Pongo
sp. (Orangutan) : ENSPPYT00000009113
Tetraodon
sp. (Tetraodon) : GSTENT00022181001
Takifugu
sp. (Fugu) : SINFRUT00000182641
Rattus
sp. (Rat) : X74800
Pan
sp. (Chimpanzee) : XM_001174155
Monodelphis
sp. (Opossum) : XM_001370777
Equus
sp. (Horse) : XM_001504299
Canis
sp. (Dog) : XM_537765
Danio
sp. (Zebrafish) : XM_689729
HIX0202539
HIT000249905
(
AK172742
)
(Unconventional myosin-Ic; Myosin I beta; MMI-beta; MMIb;)
genome : 1,368,124 - 1,395,970 (27,847)
query : 13 - 2,554 (2,542/2,570)
13 exons
identity = 0.992
3'(0.994;1.000;1.000;1.000;1.000;0.941;0.980;
0.972;1.000;1.000;1.000;0.994;1.000)5'
coverage = 0.995
InterPro :
IPR010926 : Myosin tail 2
GO :
0003774 : Molecular Function : motor activity
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 13.5, nucl 10.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000097961
(
BC044891
)
(Unconventional myosin-Ic; Myosin I beta; MMI-beta; MMIb;)
genome : 1,368,124 - 1,387,573 (19,450)
query : 1 - 3,989 (3,989/4,003)
31 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.988;1.000;1.000;1.000;1.000;1.000;
1.000;0.988;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR001609 : Myosin head, motor domain
IPR010926 : Myosin tail 2
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13.5, nucl 10, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000329890
(
AB210015
)
(Unconventional myosin-Ic; Myosin I beta; MMI-beta; MMIb;)
genome : 1,368,125 - 1,395,951 (27,827)
query : 1 - 4,257 (4,257/4,257)
32 exons
identity = 0.998
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.988;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;1.000;
0.995;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR001609 : Myosin head, motor domain
IPR010926 : Myosin tail 2
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 6, extr 3, mito 3, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000425707
(
AK292910
)
(Unconventional myosin-Ic; Myosin I beta; MMI-beta; MMIb;)
genome : 1,368,482 - 1,395,980 (27,499)
query : 1 - 3,914 (3,914/3,914)
32 exons
identity = 0.995
3'(0.973;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.988;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;0.994;1.000)5'
coverage = 1.000
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR001609 : Myosin head, motor domain
IPR010926 : Myosin tail 2
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 6, extr 3, mito 3, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000644579 (
ENST00000545534
)
(Unconventional myosin-Ic isoform c.)
genome : 1,368,707 - 1,388,661 (19,955)
query : 1 - 3,676 (3,676/3,676)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 14, nucl 8, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000490385
(
AK295761
)
(Unconventional myosin-Ic isoform b.)
genome : 1,368,707 - 1,388,649 (19,943)
query : 1 - 3,664 (3,664/3,664)
32 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.979;
1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR001609 : Myosin head, motor domain
IPR010926 : Myosin tail 2
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 14, nucl 8, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000325087
(
X98507
)
(Unconventional myosin-Ic isoform b.)
genome : 1,368,788 - 1,387,601 (18,814)
query : 32 - 3,384 (3,353/3,384)
31 exons
identity = 0.986
3'(0.973;0.990;1.000;0.972;1.000;1.000;1.000;
1.000;0.956;1.000;1.000;1.000;1.000;0.983;
1.000;0.988;1.000;0.989;0.989;0.988;0.962;
0.988;0.975;0.986;0.982;1.000;0.983;1.000;
0.980;0.991;0.975)5'
coverage = 0.991
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR001609 : Myosin head, motor domain
IPR010926 : Myosin tail 2
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.5, nucl 9, mito 3, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000686697 (
ENST00000574341
)
(Unconventional myosin-Ic; Myosin I beta; MMI-beta; MMIb;)
genome : 1,370,785 - 1,371,793 (1,009)
query : 1 - 541 (541/541)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12.5, nucl 5.5, extr 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000499406
(
AK304782
)
(Unconventional myosin-Ic isoform b.)
genome : 1,371,133 - 1,389,470 (18,338)
query : 1 - 3,013 (3,013/3,020)
29 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;0.988;0.976;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.998
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR001609 : Myosin head, motor domain
IPR010926 : Myosin tail 2
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12.5, nucl 10.5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000686668 (
ENST00000574308
)
(Unconventional myosin-Ic; Myosin I beta; MMI-beta; MMIb;)
genome : 1,371,517 - 1,373,513 (1,997)
query : 1 - 403 (403/403)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 11.5, extr 11, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000685201 (
ENST00000572615
)
(Unconventional myosin-Ic; Myosin I beta; MMI-beta; MMIb;)
genome : 1,372,084 - 1,373,778 (1,695)
query : 1 - 1,035 (1,035/1,035)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24.5, cyto_mito 14.6667, cyto_pero 3.83333,
cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000687269 (
ENST00000575011
)
(Conserved hypothetical protein.)
genome : 1,373,534 - 1,374,402 (869)
query : 1 - 385 (385/385)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13, extr 9, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000687997 (
ENST00000575864
)
(Unconventional myosin-Ic; Myosin I beta; MMI-beta; MMIb;)
genome : 1,373,925 - 1,375,649 (1,725)
query : 1 - 601 (601/601)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 14, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000684335 (
ENST00000571615
)
(Unconventional myosin-Ic; Myosin I beta; MMI-beta; MMIb;)
genome : 1,374,516 - 1,378,225 (3,710)
query : 1 - 540 (540/553)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.976
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 13, cyto_nucl 8.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000389408
(
BC127784
)
(Unconventional myosin-Ic; Myosin I beta; MMI-beta; MMIb;)
genome : 1,374,564 - 1,378,272 (3,709)
query : 12 - 471 (460/479)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.960
InterPro :
IPR001609 : Myosin head, motor domain
GO :
0003774 : Molecular Function : motor activity
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 10, nucl 5, extr_plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000686360 (
ENST00000573961
)
(Unconventional myosin-Ic; Myosin I beta; MMI-beta; MMIb;)
genome : 1,380,584 - 1,381,435 (852)
query : 1 - 443 (443/443)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11, extr 7, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000685704 (
ENST00000573198
)
(Unconventional myosin-Ic; Myosin I beta; MMI-beta; MMIb;)
genome : 1,381,971 - 1,384,510 (2,540)
query : 1 - 582 (582/582)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14, nucl 5, mito 5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000683799 (
ENST00000570984
)
(Unconventional myosin-Ic; Myosin I beta; MMI-beta; MMIb;)
genome : 1,382,886 - 1,394,963 (12,078)
query : 1 - 1,015 (1,015/1,015)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 12.5, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000684541 (
ENST00000571851
)
(Unconventional myosin-Ic; Myosin I beta; MMI-beta; MMIb;)
genome : 1,382,886 - 1,384,532 (1,647)
query : 1 - 647 (647/647)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 12.5, mito 6.5, nucl 4,
E.R._mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000688830 (
ENST00000576822
)
(Unconventional myosin-Ic; Myosin I beta; MMI-beta; MMIb;)
genome : 1,383,999 - 1,384,503 (505)
query : 1 - 505 (505/523)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.966
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13, extr 5, mito 5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000686265 (
ENST00000573853
)
(Unconventional myosin-Ic isoform b.)
genome : 1,385,783 - 1,390,215 (4,433)
query : 1 - 583 (583/583)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12.5, nucl 10.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000687079 (
ENST00000574790
)
(Unconventional myosin-Ic; Myosin I beta; MMI-beta; MMIb;)
genome : 1,385,800 - 1,395,334 (9,535)
query : 1 - 555 (555/555)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 12.5, nucl 11.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000683370 (
ENST00000570490
)
(Unconventional myosin-Ic isoform b.)
genome : 1,385,827 - 1,387,951 (2,125)
query : 1 - 565 (565/565)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14, extr 8, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000687553 (
ENST00000575335
)
(Unconventional myosin-Ic isoform b.)
genome : 1,386,183 - 1,394,531 (8,349)
query : 1 - 753 (753/753)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10.5, cyto_nucl 10.5, cyto 9.5, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0202539
HIT000684422 (
ENST00000571715
)
(Unconventional myosin-Ic; Myosin I beta; MMI-beta; MMIb;)
genome : 1,386,194 - 1,390,354 (4,161)
query : 1 - 541 (541/541)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 11, cyto 11, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202539)
HIX0013399
HIT000206211 (
NM_016532
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 1,397,871 - 1,420,182 (22,312)
query : 1 - 2,982 (2,982/3,001)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.56
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto_mito 12.3333, nucl 8.5,
cyto_nucl 6.16667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000212056 (
NM_130766
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 1,397,871 - 1,420,182 (22,312)
query : 1 - 3,213 (3,213/3,232)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.56
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9.5, nucl 9, extr 8, cyto 8, E.R._mito 5,
mito 3.5, E.R. 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000560133 (
NM_001135642
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 1,397,871 - 1,420,182 (22,312)
query : 1 - 3,372 (3,372/3,391)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.56
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9.5, nucl 9, extr 8, cyto 8, E.R._mito 5,
mito 3.5, E.R. 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000059172
(
AB036829
)
(Inositol polyphosphate 5-phosphatase K; EC=3.1.3.56; Skeletal muscle and kidney-enriched inositol phosphatase;)
genome : 1,397,871 - 1,419,969 (22,099)
query : 1 - 2,767 (2,767/2,786)
12 exons
identity = 0.995
3'(0.999;0.981;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.955)5'
coverage = 1.000
EC number :
EC 3.1.3.56
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000300 : Inositol polyphosphate-related phosphatase
IPR005135 : Endonuclease/exonuclease/phosphatase
GO :
0046856 : Biological Process : phosphatidylinositol dephosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto_mito 12.3333, nucl 8.5,
cyto_nucl 6.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000059173
(
AB036830
)
(Inositol polyphosphate 5-phosphatase K isoform 2.)
genome : 1,397,871 - 1,419,969 (22,099)
query : 1 - 2,996 (2,996/3,015)
13 exons
identity = 0.994
3'(0.999;0.981;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.987;0.942)5'
coverage = 1.000
EC number :
EC 3.1.3.56
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000300 : Inositol polyphosphate-related phosphatase
IPR005135 : Endonuclease/exonuclease/phosphatase
GO :
0046856 : Biological Process : phosphatidylinositol dephosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, cyto_nucl 9.5, extr 8, nucl 7, E.R._mito 5,
mito 3.5, E.R. 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000219976
(
U45973
)
(Inositol polyphosphate 5-phosphatase K; EC=3.1.3.56; Skeletal muscle and kidney-enriched inositol phosphatase;)
genome : 1,397,871 - 1,412,653 (14,783)
query : 16 - 2,236 (2,221/2,255)
8 exons
identity = 0.998
3'(0.999;0.981;1.000;1.000;1.000;1.000;1.000;
0.989)5'
coverage = 0.993
EC number :
EC 3.1.3.56
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000300 : Inositol polyphosphate-related phosphatase
IPR005135 : Endonuclease/exonuclease/phosphatase
GO :
0046856 : Biological Process : phosphatidylinositol dephosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 24, nucl 4, cyto 4, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000519741 (
ENST00000421807
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 1,397,865 - 1,420,182 (22,318)
query : 1 - 2,988 (2,988/2,988)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto_mito 12.3333, nucl 8.5,
cyto_nucl 6.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000505587 (
ENST00000406424
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 1,397,903 - 1,420,036 (22,134)
query : 1 - 3,194 (3,194/3,194)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9.5, nucl 9, extr 8, cyto 8, E.R._mito 5,
mito 3.5, E.R. 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000122389 (
ENST00000320345
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 1,398,051 - 1,420,029 (21,979)
query : 1 - 2,880 (2,880/2,880)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9.5, nucl 9, extr 8, cyto 8, E.R._mito 5,
mito 3.5, E.R. 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000031888
(
BC004362
)
Representative transcript
(Inositol polyphosphate 5-phosphatase K; EC=3.1.3.56; Skeletal muscle and kidney-enriched inositol phosphatase;)
genome : 1,398,902 - 1,419,981 (21,080)
query : 1 - 1,750 (1,750/1,826)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.996)5'
coverage = 1.000
EC number :
EC 3.1.3.56
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000300 : Inositol polyphosphate-related phosphatase
IPR005135 : Endonuclease/exonuclease/phosphatase
GO :
0046856 : Biological Process : phosphatidylinositol dephosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto_mito 12.3333, nucl 8.5,
cyto_nucl 6.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000480628 (
ENST00000397335
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 1,398,861 - 1,419,914 (21,054)
query : 1 - 1,507 (1,507/1,507)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 13.5, nucl 11, E.R._mito 5, mito 3,
E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000492579
(
AK297955
)
(Inositol polyphosphate 5-phosphatase K; EC=3.1.3.56; Skeletal muscle and kidney-enriched inositol phosphatase;)
genome : 1,398,861 - 1,419,912 (21,052)
query : 3 - 1,507 (1,505/1,507)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 3.1.3.56
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000300 : Inositol polyphosphate-related phosphatase
IPR005135 : Endonuclease/exonuclease/phosphatase
GO :
0046856 : Biological Process : phosphatidylinositol dephosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 13.5, nucl 11, E.R._mito 5, mito 3,
E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000307987 (
ENST00000350761
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 1,398,861 - 1,419,912 (21,052)
query : 1 - 1,505 (1,505/1,505)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 13.5, nucl 11, E.R._mito 5, mito 3,
E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000498531
(
AK303907
)
(Inositol polyphosphate 5-phosphatase K; EC=3.1.3.56; Skeletal muscle and kidney-enriched inositol phosphatase;)
genome : 1,398,924 - 1,419,912 (20,989)
query : 1 - 1,371 (1,371/1,371)
10 exons
identity = 0.999
3'(1.000;0.990;1.000;1.000;0.995;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.56
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000300 : Inositol polyphosphate-related phosphatase
IPR005135 : Endonuclease/exonuclease/phosphatase
GO :
0046856 : Biological Process : phosphatidylinositol dephosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_mito 12, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000641170 (
ENST00000542125
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 1,398,924 - 1,419,912 (20,989)
query : 1 - 1,371 (1,371/1,371)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_mito 12, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000590760 (
ENST00000487039
)
(Conserved hypothetical protein.)
genome : 1,399,094 - 1,399,755 (662)
query : 1 - 482 (482/482)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 9.5, nucl 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000431710
(
AK312844
)
(Inositol polyphosphate 5-phosphatase K; EC=3.1.3.56; Skeletal muscle and kidney-enriched inositol phosphatase;)
genome : 1,399,117 - 1,420,182 (21,066)
query : 1 - 1,736 (1,736/1,736)
12 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.991;0.995)5'
coverage = 1.000
EC number :
EC 3.1.3.56
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000300 : Inositol polyphosphate-related phosphatase
IPR005135 : Endonuclease/exonuclease/phosphatase
GO :
0046856 : Biological Process : phosphatidylinositol dephosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto_mito 12.3333, nucl 8.5,
cyto_nucl 6.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000431451
(
AK312585
)
(Inositol polyphosphate 5-phosphatase K isoform 2.)
genome : 1,399,117 - 1,419,974 (20,858)
query : 1 - 1,521 (1,521/1,521)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.56
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000300 : Inositol polyphosphate-related phosphatase
IPR005135 : Endonuclease/exonuclease/phosphatase
GO :
0046856 : Biological Process : phosphatidylinositol dephosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9.5, nucl 9, extr 8, cyto 8, E.R._mito 5,
mito 3.5, E.R. 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000686880 (
ENST00000574561
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 1,399,611 - 1,419,921 (20,311)
query : 1 - 583 (583/591)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.986
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000566430 (
ENST00000461552
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 1,399,783 - 1,401,495 (1,713)
query : 1 - 581 (581/581)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11.1667, mito_nucl 9.66667,
cyto 5.5, cyto_pero 5.33333, extr 5, mito 5, pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000598706 (
ENST00000495339
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 1,401,052 - 1,410,314 (9,263)
query : 1 - 406 (406/406)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000547413 (
ENST00000449479
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 1,401,230 - 1,419,888 (18,659)
query : 1 - 949 (949/949)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 16, nucl 4, E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000585825 (
ENST00000481867
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 1,401,355 - 1,411,794 (10,440)
query : 1 - 558 (558/558)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15.5, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000581273 (
ENST00000477115
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 1,401,373 - 1,410,999 (9,627)
query : 1 - 770 (770/770)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14, cyto 9, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000687405 (
ENST00000575172
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 1,410,287 - 1,419,912 (9,626)
query : 1 - 594 (594/594)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27.5, mito_pero 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000688677 (
ENST00000576646
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 1,411,409 - 1,417,273 (5,865)
query : 1 - 625 (625/629)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11, extr 10, nucl 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000686212 (
ENST00000573790
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 1,411,424 - 1,419,876 (8,453)
query : 1 - 635 (635/635)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 10, cyto_nucl 3.5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000426159
(
AK307293
)
(Inositol polyphosphate 5-phosphatase K; EC=3.1.3.56; Skeletal muscle and kidney-enriched inositol phosphatase;)
genome : 1,411,991 - 1,419,951 (7,961)
query : 1 - 962 (962/962)
5 exons
identity = 0.990
3'(0.975;0.994;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.56
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR005135 : Endonuclease/exonuclease/phosphatase
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 10, cyto_nucl 3.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000565649 (
ENST00000460733
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 1,412,271 - 1,416,806 (4,536)
query : 1 - 554 (554/554)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11, extr 10, nucl 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000684046 (
ENST00000571274
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 1,412,544 - 1,418,995 (6,452)
query : 1 - 571 (571/571)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000543708 (
ENST00000445774
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 1,412,976 - 1,419,974 (6,999)
query : 1 - 553 (553/565)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.979
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 7, cyto_mito 7, cysk 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000582034 (
ENST00000477910
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 1,412,977 - 1,419,906 (6,930)
query : 1 - 739 (739/739)
5 exons
identity = 0.982
3'(1.000;1.000;1.000;0.948;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 4.5, cyto_nucl 4.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000601614 (
ENST00000498390
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 1,413,009 - 1,419,947 (6,939)
query : 1 - 622 (622/622)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, nucl 7, cyto_nucl 6, cyto 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0013399
HIT000687220 (
ENST00000574955
)
(Conserved hypothetical protein.)
genome : 1,413,715 - 1,419,955 (6,241)
query : 1 - 566 (566/566)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013399)
HIX0039236
HIT000657877 (
NR_028514
)
(Hypothetical short protein.)
genome : 1,420,213 - 1,421,389 (1,177)
query : 1 - 553 (553/570)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039236)
HIX0039236
HIT000523015 (
ENST00000425081
)
(Hypothetical short protein.)
genome : 1,420,225 - 1,421,390 (1,166)
query : 1 - 542 (542/542)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039236)
HIX0202467
HIT000119766 (
ENST00000313486
)
(Phosphatidylinositol transfer protein alpha isoform; PI-TP-alpha; PtdIns transfer protein alpha; PtdInsTP alpha;)
genome : 1,421,012 - 1,466,110 (45,099)
query : 1 - 3,912 (3,912/3,912)
11 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.940;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202467)
HIX0202467
HIT000024806
(
AL117644
)
(Conserved hypothetical protein.)
genome : 1,421,284 - 1,422,690 (1,407)
query : 1 - 1,407 (1,407/1,455)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, extr 6, cyto_pero 2.83333, cyto 2.5,
cyto_nucl 2.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202467)
HIX0202467
HIT000266014
(
BC082976
)
(Phosphatidylinositol transfer protein alpha isoform; PI-TP-alpha; PtdIns transfer protein alpha; PtdInsTP alpha;)
genome : 1,421,284 - 1,466,025 (44,742)
query : 1 - 3,555 (3,555/3,600)
11 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.940;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001666 : Phosphatidylinositol transfer protein
IPR023393 : START-like domain
GO :
0005622 : Cellular Component : intracellular
0006810 : Biological Process : transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202467)
HIX0202467
HIT000263095
(
BC068538
)
(Phosphatidylinositol transfer protein alpha isoform; PI-TP-alpha; PtdIns transfer protein alpha; PtdInsTP alpha;)
genome : 1,421,284 - 1,466,108 (44,825)
query : 1 - 3,523 (3,523/3,554)
11 exons
identity = 0.997
3'(0.999;1.000;0.992;1.000;1.000;0.988;1.000;
0.930;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001666 : Phosphatidylinositol transfer protein
IPR023393 : START-like domain
GO :
0005622 : Cellular Component : intracellular
0006810 : Biological Process : transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 6.5, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202467)
HIX0202467
HIT000202832 (
NM_006224
)
(Phosphatidylinositol transfer protein alpha isoform; PI-TP-alpha; PtdIns transfer protein alpha; PtdInsTP alpha;)
genome : 1,421,284 - 1,466,110 (44,827)
query : 1 - 3,640 (3,640/3,660)
11 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.940;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202467)
HIX0202467
HIT000052917
(
BC045108
)
Representative transcript
(Phosphatidylinositol transfer protein alpha isoform; PI-TP-alpha; PtdIns transfer protein alpha; PtdInsTP alpha;)
genome : 1,421,284 - 1,466,085 (44,802)
query : 1 - 3,614 (3,614/3,632)
11 exons
identity = 0.997
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
0.940;0.993;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001666 : Phosphatidylinositol transfer protein
IPR023393 : START-like domain
GO :
0005622 : Cellular Component : intracellular
0006810 : Biological Process : transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202467)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ719592
Mus
sp. (Mouse) : AK168720
Danio
sp. (Zebrafish) : BC044192
Rattus
sp. (Rat) : BC070945
Bos
sp. (Cow) : BC113306
Equus
sp. (Horse) : ENSECAT00000018385
Monodelphis
sp. (Opossum) : ENSMODT00000013191
Oryzias
sp. (Medaka) : ENSORLT00000014891
Pongo
sp. (Orangutan) : ENSPPYT00000009116
Tetraodon
sp. (Tetraodon) : GSTENT00026704001
Takifugu
sp. (Fugu) : SINFRUT00000141384
Takifugu
sp. (Fugu) : SINFRUT00000174781
Pan
sp. (Chimpanzee) : XM_001154250
Canis
sp. (Dog) : XM_537767
HIX0202467
HIT000638521 (
ENST00000539476
)
(Phosphatidylinositol transfer protein alpha isoform; PI-TP-alpha; PtdIns transfer protein alpha; PtdInsTP alpha;)
genome : 1,421,287 - 1,466,110 (44,824)
query : 1 - 3,637 (3,637/3,637)
11 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.940;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202467)
HIX0202467
HIT000465967
(
DQ599436
)
(Non-protein coding transcript.)
genome : 1,422,370 - 1,422,399 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202467)
HIX0202467
HIT000101330
(
D30036
)
(Phosphatidylinositol transfer protein alpha isoform; PI-TP-alpha; PtdIns transfer protein alpha; PtdInsTP alpha;)
genome : 1,422,568 - 1,466,061 (43,494)
query : 2 - 2,308 (2,307/2,308)
11 exons
identity = 0.996
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
0.940;0.986;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001666 : Phosphatidylinositol transfer protein
IPR023393 : START-like domain
GO :
0005622 : Cellular Component : intracellular
0006810 : Biological Process : transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202467)
HIX0202467
HIT000091317
(
BC027177
)
(Phosphatidylinositol transfer protein alpha isoform; PI-TP-alpha; PtdIns transfer protein alpha; PtdInsTP alpha;)
genome : 1,423,507 - 1,466,040 (42,534)
query : 1 - 1,264 (1,264/1,278)
10 exons
identity = 0.998
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001666 : Phosphatidylinositol transfer protein
IPR023393 : START-like domain
GO :
0005622 : Cellular Component : intracellular
0006810 : Biological Process : transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, nucl 2, mito 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202467)
HIX0202467
HIT000687508 (
ENST00000575288
)
(Phosphatidylinositol transfer protein alpha isoform; PI-TP-alpha; PtdIns transfer protein alpha; PtdInsTP alpha;)
genome : 1,423,507 - 1,466,040 (42,534)
query : 1 - 1,264 (1,264/1,264)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202467)
HIX0202467
HIT000196275
(
M73704
)
(Phosphatidylinositol transfer protein alpha isoform; PI-TP-alpha; PtdIns transfer protein alpha; PtdInsTP alpha;)
genome : 1,423,516 - 1,466,070 (42,555)
query : 1 - 1,368 (1,368/1,368)
11 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.940;1.000;1.000;0.996)5'
coverage = 1.000
InterPro :
IPR001666 : Phosphatidylinositol transfer protein
IPR023393 : START-like domain
GO :
0005622 : Cellular Component : intracellular
0006810 : Biological Process : transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202467)
HIX0202467
HIT000498610
(
AK303986
)
(Phosphatidylinositol transfer protein alpha isoform; PI-TP-alpha; PtdIns transfer protein alpha; PtdInsTP alpha;)
genome : 1,423,681 - 1,463,095 (39,415)
query : 1 - 1,013 (1,013/1,013)
11 exons
identity = 0.993
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.940;0.993;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001666 : Phosphatidylinositol transfer protein
IPR023393 : START-like domain
GO :
0005622 : Cellular Component : intracellular
0006810 : Biological Process : transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 8, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202467)
HIX0013401
HIT000013383
(
AK056769
)
Representative transcript
(Activating molecule in BECN1-regulated autophagy protein 1 isoform 1.)
genome : 1,435,400 - 1,475,838 (40,439)
query : 1 - 2,496 (2,496/2,496)
2 exons
identity = 0.987
5'(0.840;0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 5, cyto 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013401)
HIX0202588
HIT000259365
(
BC053891
)
Representative transcript
(Conserved hypothetical protein.)
genome : 1,435,562 - 1,437,377 (1,816)
query : 1 - 1,816 (1,816/1,830)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, extr 8, nucl 2, cyto 1.5, cyto_pero 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202588)
HIX0202467
HIT000687250 (
ENST00000574991
)
(Phosphatidylinositol transfer protein alpha isoform; PI-TP-alpha; PtdIns transfer protein alpha; PtdInsTP alpha;)
genome : 1,437,463 - 1,456,366 (18,904)
query : 1 - 627 (627/627)
8 exons
identity = 0.990
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.940;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202467)
HIX0202467
HIT000688739 (
ENST00000576722
)
(Phosphatidylinositol transfer protein alpha isoform; PI-TP-alpha; PtdIns transfer protein alpha; PtdInsTP alpha;)
genome : 1,438,476 - 1,466,033 (27,558)
query : 1 - 793 (793/793)
7 exons
identity = 0.992
3'(1.000;1.000;1.000;1.000;0.940;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, mito 7, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202467)
HIX0202467
HIT000688026 (
ENST00000575895
)
(Phosphatidylinositol transfer protein alpha isoform; PI-TP-alpha; PtdIns transfer protein alpha; PtdInsTP alpha;)
genome : 1,438,556 - 1,463,095 (24,540)
query : 1 - 591 (591/591)
8 exons
identity = 0.990
3'(1.000;1.000;1.000;1.000;0.940;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 7, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202467)
HIX0202467
HIT000688773 (
ENST00000576761
)
(Phosphatidylinositol transfer protein alpha isoform; PI-TP-alpha; PtdIns transfer protein alpha; PtdInsTP alpha;)
genome : 1,438,765 - 1,466,062 (27,298)
query : 1 - 589 (589/589)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202467)
HIX0202467
HIT000684677 (
ENST00000572004
)
(Phosphatidylinositol transfer protein alpha isoform; PI-TP-alpha; PtdIns transfer protein alpha; PtdInsTP alpha; Phosphatidylinositol-transfer protein 35 kDa isoform; PI-TP 35 kda isoform;)
genome : 1,441,733 - 1,444,893 (3,161)
query : 1 - 548 (548/548)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 13, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202467)
HIX0202467
HIT000688125 (
ENST00000576010
)
(Phosphatidylinositol transfer protein alpha isoform; PI-TP-alpha; PtdIns transfer protein alpha; PtdInsTP alpha;)
genome : 1,442,162 - 1,466,074 (23,913)
query : 1 - 562 (562/573)
6 exons
identity = 0.989
3'(1.000;1.000;0.940;1.000;1.000;1.000)5'
coverage = 0.981
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 14.5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202467)
HIX0202467
HIT000685733 (
ENST00000573231
)
(Phosphatidylinositol transfer protein alpha isoform; PI-TP-alpha; PtdIns transfer protein alpha; PtdInsTP alpha;)
genome : 1,444,881 - 1,465,924 (21,044)
query : 1 - 504 (504/504)
6 exons
identity = 0.988
3'(1.000;0.940;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 15.5, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202467)
HIX0202467
HIT000685583 (
ENST00000573056
)
(Phosphatidylinositol transfer protein alpha isoform; PI-TP-alpha; PtdIns transfer protein alpha; PtdInsTP alpha;)
genome : 1,451,590 - 1,463,095 (11,506)
query : 1 - 563 (563/571)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.986
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13.5, extr 8, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202467)
HIX0017704
HIT000089918
(
BC019562
)
(Large neutral amino acids transporter small subunit 4; L-type amino acid transporter 4; Solute carrier family 43 member 2;)
genome : 1,477,697 - 1,494,995 (17,299)
query : 7 - 2,325 (2,319/2,445)
8 exons
identity = 0.999
3'(0.999;1.000;1.000;0.992;1.000;0.993;1.000;
1.000)5'
coverage = 0.997
InterPro :
IPR027201 : Large neutral amino acids transporter small subunit 4
GO :
0015179 : Molecular Function : L-amino acid transmembrane transporter activity
0015807 : Biological Process : L-amino acid transport
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017704)
HIX0017704
HIT000328643
(
AB120364
)
(Large neutral amino acids transporter small subunit 4; L-type amino acid transporter 4; Solute carrier family 43 member 2;)
genome : 1,477,673 - 1,531,635 (53,963)
query : 1 - 3,254 (3,254/3,271)
14 exons
identity = 0.996
3'(0.997;1.000;1.000;1.000;1.000;0.950;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011701 : Major facilitator superfamily
IPR027201 : Large neutral amino acids transporter small subunit 4
GO :
0015179 : Molecular Function : L-amino acid transmembrane transporter activity
0015807 : Biological Process : L-amino acid transport
0016021 : Cellular Component : integral component of membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017704)
HIX0017704
HIT000015208
(
AK074428
)
(Large neutral amino acids transporter small subunit 4; L-type amino acid transporter 4; Solute carrier family 43 member 2;)
genome : 1,477,697 - 1,481,627 (3,931)
query : 12 - 1,581 (1,570/1,608)
3 exons
identity = 0.997
3'(0.999;1.000;0.976)5'
coverage = 0.993
InterPro :
IPR027201 : Large neutral amino acids transporter small subunit 4
GO :
0015179 : Molecular Function : L-amino acid transmembrane transporter activity
0015807 : Biological Process : L-amino acid transport
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017704)
HIX0017704
HIT000040356
(
BC027923
)
Representative transcript
(Large neutral amino acids transporter small subunit 4; L-type amino acid transporter 4; Solute carrier family 43 member 2;)
genome : 1,477,697 - 1,532,130 (54,434)
query : 1 - 3,000 (3,000/3,024)
14 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011701 : Major facilitator superfamily
IPR027201 : Large neutral amino acids transporter small subunit 4
GO :
0015179 : Molecular Function : L-amino acid transmembrane transporter activity
0015807 : Biological Process : L-amino acid transport
0016021 : Cellular Component : integral component of membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017704)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC042513
Bos
sp. (Cow) : BC120095
Gallus
sp. (Chicken) : CR387789
Pongo
sp. (Orangutan) : CR857303
Danio
sp. (Zebrafish) : ENSDART00000100772
Oryzias
sp. (Medaka) : ENSORLT00000006327
Oryzias
sp. (Medaka) : ENSORLT00000012188
Takifugu
sp. (Fugu) : SINFRUT00000141579
Rattus
sp. (Rat) : XM_001080703
Macaca
sp. (Macaque) : XM_001086025
Monodelphis
sp. (Opossum) : XM_001371193
Equus
sp. (Horse) : XM_001502290
Canis
sp. (Dog) : XM_849286
Pan
sp. (Chimpanzee) : XR_021402
HIX0017704
HIT000213617 (
NM_152346
)
(Large neutral amino acids transporter small subunit 4; L-type amino acid transporter 4; Solute carrier family 43 member 2;)
genome : 1,477,697 - 1,532,130 (54,434)
query : 1 - 3,000 (3,000/3,024)
14 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017704)
HIX0017704
HIT000684365 (
ENST00000571650
)
(Large neutral amino acids transporter small subunit 4; L-type amino acid transporter 4; Solute carrier family 43 member 2;)
genome : 1,477,673 - 1,531,635 (53,963)
query : 1 - 3,254 (3,254/3,254)
14 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;0.950;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017704)
HIX0017704
HIT000082231
(
AK075196
)
(Large neutral amino acids transporter small subunit 4; L-type amino acid transporter 4; Solute carrier family 43 member 2;)
genome : 1,477,679 - 1,494,995 (17,317)
query : 13 - 2,349 (2,337/2,349)
8 exons
identity = 0.997
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.995
InterPro :
IPR027201 : Large neutral amino acids transporter small subunit 4
GO :
0015179 : Molecular Function : L-amino acid transmembrane transporter activity
0015807 : Biological Process : L-amino acid transport
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017704)
HIX0017704
HIT000115845 (
ENST00000301335
)
(Large neutral amino acids transporter small subunit 4; L-type amino acid transporter 4; Solute carrier family 43 member 2;)
genome : 1,477,696 - 1,532,130 (54,435)
query : 1 - 3,001 (3,001/3,001)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017704)
HIX0017704
HIT000363425 (
ENST00000382147
)
(Large neutral amino acids transporter small subunit 4; L-type amino acid transporter 4; Solute carrier family 43 member 2;)
genome : 1,477,698 - 1,532,130 (54,433)
query : 1 - 3,011 (3,011/3,011)
14 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.987;0.980;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017704)
HIX0017704
HIT000082208
(
AK075173
)
(Large neutral amino acids transporter small subunit 4; L-type amino acid transporter 4; Solute carrier family 43 member 2;)
genome : 1,477,698 - 1,519,956 (42,259)
query : 1 - 2,643 (2,643/2,643)
12 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011701 : Major facilitator superfamily
IPR027201 : Large neutral amino acids transporter small subunit 4
GO :
0015179 : Molecular Function : L-amino acid transmembrane transporter activity
0015807 : Biological Process : L-amino acid transport
0016021 : Cellular Component : integral component of membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017704)
HIX0017704
HIT000082103
(
AK075068
)
(Large neutral amino acids transporter small subunit 4; L-type amino acid transporter 4; Solute carrier family 43 member 2;)
genome : 1,477,698 - 1,519,902 (42,205)
query : 1 - 2,589 (2,589/2,589)
12 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;0.995;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011701 : Major facilitator superfamily
IPR027201 : Large neutral amino acids transporter small subunit 4
GO :
0015179 : Molecular Function : L-amino acid transmembrane transporter activity
0015807 : Biological Process : L-amino acid transport
0016021 : Cellular Component : integral component of membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017704)
HIX0017704
HIT000510451 (
ENST00000412517
)
(Large neutral amino acids transporter small subunit 4; L-type amino acid transporter 4; Solute carrier family 43 member 2;)
genome : 1,478,795 - 1,508,379 (29,585)
query : 1 - 1,658 (1,658/1,658)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017704)
HIX0017704
HIT000495751
(
AK301127
)
(Large neutral amino acids transporter small subunit 4; L-type amino acid transporter 4; Solute carrier family 43 member 2;)
genome : 1,478,795 - 1,508,211 (29,417)
query : 1 - 1,490 (1,490/1,490)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.995;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR027201 : Large neutral amino acids transporter small subunit 4
GO :
0015179 : Molecular Function : L-amino acid transmembrane transporter activity
0015807 : Biological Process : L-amino acid transport
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017704)
HIX0017704
HIT000688584 (
ENST00000576537
)
(Large neutral amino acids transporter small subunit 4; L-type amino acid transporter 4; Solute carrier family 43 member 2;)
genome : 1,479,897 - 1,481,999 (2,103)
query : 1 - 574 (574/574)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, plas 5, pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017704)
HIX0017704
HIT000688780 (
ENST00000576769
)
(Large neutral amino acids transporter small subunit 4; L-type amino acid transporter 4; Solute carrier family 43 member 2;)
genome : 1,481,548 - 1,486,992 (5,445)
query : 1 - 565 (565/565)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 15, plas 5, pero 5, nucl 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017704)
HIX0017704
HIT000264672
(
BC071859
)
(Large neutral amino acids transporter small subunit 4; L-type amino acid transporter 4; Solute carrier family 43 member 2;)
genome : 1,488,548 - 1,532,180 (43,633)
query : 1 - 2,015 (2,015/2,032)
10 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011701 : Major facilitator superfamily
IPR027201 : Large neutral amino acids transporter small subunit 4
GO :
0015179 : Molecular Function : L-amino acid transmembrane transporter activity
0015807 : Biological Process : L-amino acid transport
0016021 : Cellular Component : integral component of membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017704)
HIX0017704
HIT000076421
(
AF289592
)
(Large neutral amino acids transporter small subunit 4; L-type amino acid transporter 4; Solute carrier family 43 member 2;)
genome : 1,488,548 - 1,531,544 (42,997)
query : 2 - 2,061 (2,060/2,078)
10 exons
identity = 0.995
3'(0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.990;0.993)5'
coverage = 1.000
InterPro :
IPR011701 : Major facilitator superfamily
IPR027201 : Large neutral amino acids transporter small subunit 4
GO :
0015179 : Molecular Function : L-amino acid transmembrane transporter activity
0015807 : Biological Process : L-amino acid transport
0016021 : Cellular Component : integral component of membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017704)
HIX0017704
HIT000687038 (
ENST00000574743
)
(Large neutral amino acids transporter small subunit 4; L-type amino acid transporter 4; Solute carrier family 43 member 2;)
genome : 1,488,533 - 1,532,180 (43,648)
query : 1 - 2,030 (2,030/2,030)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017704)
HIX0017704
HIT000684792 (
ENST00000572135
)
(Large neutral amino acids transporter small subunit 4; L-type amino acid transporter 4; Solute carrier family 43 member 2;)
genome : 1,488,533 - 1,531,544 (43,012)
query : 1 - 2,074 (2,074/2,074)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017704)
HIX0017704
HIT000685356 (
ENST00000572801
)
(Large neutral amino acids transporter small subunit 4; L-type amino acid transporter 4; Solute carrier family 43 member 2;)
genome : 1,494,144 - 1,532,134 (37,991)
query : 1 - 915 (915/915)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017704)
HIX0017704
HIT000686637 (
ENST00000574274
)
(Large neutral amino acids transporter small subunit 4; L-type amino acid transporter 4; Solute carrier family 43 member 2;)
genome : 1,494,201 - 1,508,570 (14,370)
query : 1 - 556 (556/556)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, pero 3, mito 2.5, plas 2, E.R._mito 2,
cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017704)
HIX0017704
HIT000688738 (
ENST00000576721
)
(Conserved hypothetical protein.)
genome : 1,494,734 - 1,508,238 (13,505)
query : 1 - 567 (567/567)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 11.5, nucl 9.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017704)
HIX0017704
HIT000684134 (
ENST00000571376
)
(Large neutral amino acids transporter small subunit 4; L-type amino acid transporter 4; Solute carrier family 43 member 2;)
genome : 1,494,916 - 1,531,205 (36,290)
query : 1 - 623 (623/623)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017704)
HIX0017704
HIT000688068 (
ENST00000575944
)
(Large neutral amino acids transporter small subunit 4; L-type amino acid transporter 4; Solute carrier family 43 member 2;)
genome : 1,519,660 - 1,531,093 (11,434)
query : 1 - 489 (489/489)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18.5, extr_plas 11, pero 5, mito_pero 4.5,
cyto 3, plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017704)
HIX0013404
HIT000052245
(
BC039735
)
Representative transcript
(Scavenger receptor class F member 1; Acetyl LDL receptor; Scavenger receptor expressed by endothelial cells 1; SREC-I; Precursor;)
genome : 1,537,160 - 1,549,041 (11,882)
query : 11 - 3,443 (3,433/3,471)
11 exons
identity = 0.998
3'(0.997;1.000;1.000;0.983;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR002049 : EGF-like, laminin
IPR013032 : EGF-like, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, extr_plas 12.5, E.R. 3, cyto 2.5,
cyto_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013404)
HIX0013404
HIT000200500 (
NM_003693
)
(Scavenger receptor class F member 1; Acetyl LDL receptor; Scavenger receptor expressed by endothelial cells 1; SREC-I; Precursor;)
genome : 1,537,152 - 1,549,083 (11,932)
query : 1 - 3,485 (3,485/3,502)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, extr_plas 12.5, E.R. 3, cyto 2.5,
cyto_pero 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013404)
HIX0013404
HIT000317841 (
NM_145350
)
(Scavenger receptor class F member 1; Acetyl LDL receptor; Scavenger receptor expressed by endothelial cells 1; SREC-I; Precursor;)
genome : 1,537,152 - 1,549,083 (11,932)
query : 1 - 3,448 (3,448/3,465)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23.5, extr_plas 13, pero 3, cyto 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013404)
HIX0013404
HIT000657713 (
NR_028075
)
(Scavenger receptor class F member 1; Acetyl LDL receptor; Scavenger receptor expressed by endothelial cells 1; SREC-I; Precursor;)
genome : 1,537,152 - 1,549,083 (11,932)
query : 1 - 3,415 (3,415/3,432)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 11, mito 10, cyto 5, E.R._mito 5,
mito_pero 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013404)
HIX0013404
HIT000727809 (
NR_102409
)
(Scavenger receptor class F member 1; Acetyl LDL receptor; Scavenger receptor expressed by endothelial cells 1; SREC-I; Precursor;)
genome : 1,537,152 - 1,549,083 (11,932)
query : 1 - 3,522 (3,522/3,539)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12.5, cyto 8.5, plas 3.5,
extr_plas 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013404)
HIX0013404
HIT000108733 (
ENST00000263071
)
(Scavenger receptor class F member 1; Acetyl LDL receptor; Scavenger receptor expressed by endothelial cells 1; SREC-I; Precursor;)
genome : 1,537,152 - 1,549,041 (11,890)
query : 1 - 3,443 (3,443/3,443)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, extr_plas 12.5, E.R. 3, cyto 2.5,
cyto_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013404)
HIX0013404
HIT000307715 (
ENST00000348987
)
(Scavenger receptor class F member 1; Acetyl LDL receptor; Scavenger receptor expressed by endothelial cells 1; SREC-I; Precursor;)
genome : 1,537,152 - 1,549,041 (11,890)
query : 1 - 3,185 (3,185/3,185)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22.5, extr_plas 12, E.R. 3, cyto 2.5,
cyto_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013404)
HIX0013404
HIT000059656
(
AB052947
)
(Scavenger receptor class F member 1; Acetyl LDL receptor; Scavenger receptor expressed by endothelial cells 1; SREC-I; Precursor;)
genome : 1,537,159 - 1,549,017 (11,859)
query : 1 - 3,338 (3,338/3,338)
11 exons
identity = 0.997
3'(0.995;1.000;1.000;0.983;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 11, mito 10, cyto 5, E.R._mito 5,
mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013404)
HIX0013404
HIT000101937
(
D86864
)
(Scavenger receptor class F member 1; Acetyl LDL receptor; Scavenger receptor expressed by endothelial cells 1; SREC-I; Precursor;)
genome : 1,537,159 - 1,549,017 (11,859)
query : 1 - 3,408 (3,408/3,408)
11 exons
identity = 0.997
3'(0.995;1.000;1.000;0.983;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR002049 : EGF-like, laminin
IPR013032 : EGF-like, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, extr_plas 12.5, E.R. 3, cyto 2.5,
cyto_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013404)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK133477
Rattus
sp. (Rat) : BC088259
Canis
sp. (Dog) : ENSCAFT00000030477
Oryzias
sp. (Medaka) : ENSORLT00000010116
Pongo
sp. (Orangutan) : ENSPPYT00000009119
Takifugu
sp. (Fugu) : SINFRUT00000135035
Macaca
sp. (Macaque) : XM_001117324
Gallus
sp. (Chicken) : XM_001234822
Monodelphis
sp. (Opossum) : XM_001371193
Equus
sp. (Horse) : XM_001502293
Bos
sp. (Cow) : XM_870136
Pan
sp. (Chimpanzee) : XR_021405
HIX0013404
HIT000532310 (
ENST00000434376
)
(Scavenger receptor class F member 1; Acetyl LDL receptor; Scavenger receptor expressed by endothelial cells 1; SREC-I; Precursor;)
genome : 1,537,159 - 1,549,017 (11,859)
query : 1 - 3,342 (3,342/3,342)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 11, mito 10, cyto 5, E.R._mito 5,
mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013404)
HIX0013404
HIT000042286
(
D63483
)
(Scavenger receptor class F member 1; Acetyl LDL receptor; Scavenger receptor expressed by endothelial cells 1; SREC-I; Precursor;)
genome : 1,537,159 - 1,548,993 (11,835)
query : 1 - 3,387 (3,387/3,387)
11 exons
identity = 0.998
3'(0.996;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR002049 : EGF-like, laminin
IPR013032 : EGF-like, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, extr_plas 12.5, E.R. 3, cyto 2.5,
cyto_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013404)
HIX0013404
HIT000059657
(
AB052948
)
(Scavenger receptor class F member 1 isoform 3 precursor.)
genome : 1,537,684 - 1,549,038 (11,355)
query : 13 - 2,883 (2,871/2,883)
11 exons
identity = 0.998
3'(0.998;1.000;1.000;0.983;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.996
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR002049 : EGF-like, laminin
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR013032 : EGF-like, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23.5, extr_plas 13, pero 3, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013404)
HIX0013404
HIT000684044 (
ENST00000571272
)
(Scavenger receptor class F member 1; Acetyl LDL receptor; Scavenger receptor expressed by endothelial cells 1; SREC-I; Precursor;)
genome : 1,537,684 - 1,549,038 (11,355)
query : 1 - 2,871 (2,871/2,871)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23.5, extr_plas 13, pero 3, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013404)
HIX0013404
HIT000059658
(
AB052949
)
(Scavenger receptor class F member 1; Acetyl LDL receptor; Scavenger receptor expressed by endothelial cells 1; SREC-I; Precursor;)
genome : 1,537,684 - 1,549,015 (11,332)
query : 1 - 3,292 (3,292/3,292)
10 exons
identity = 0.998
3'(0.998;1.000;1.000;0.983;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 11, mito 10, cyto 5, E.R._mito 5,
mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013404)
HIX0013404
HIT000688126 (
ENST00000576012
)
(Scavenger receptor class F member 1; Acetyl LDL receptor; Scavenger receptor expressed by endothelial cells 1; SREC-I; Precursor;)
genome : 1,537,684 - 1,549,015 (11,332)
query : 1 - 3,292 (3,292/3,292)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 11, mito 10, cyto 5, E.R._mito 5,
mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013404)
HIX0013404
HIT000059659
(
AB052950
)
(Scavenger receptor class F member 1 isoform 3 precursor.)
genome : 1,537,684 - 1,549,007 (11,324)
query : 1 - 2,619 (2,619/2,619)
9 exons
identity = 0.997
3'(0.998;1.000;1.000;0.983;0.979;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR002049 : EGF-like, laminin
IPR013032 : EGF-like, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, extr_plas 12.5, E.R. 3, cyto 2.5,
cyto_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013404)
HIX0013404
HIT000429040
(
AK310174
)
(Scavenger receptor class F member 1; Acetyl LDL receptor; Scavenger receptor expressed by endothelial cells 1; SREC-I; Precursor;)
genome : 1,537,899 - 1,549,006 (11,108)
query : 1 - 2,698 (2,698/2,698)
11 exons
identity = 0.998
3'(0.998;1.000;1.000;0.983;1.000;1.000;1.000;
0.998;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR002049 : EGF-like, laminin
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR013032 : EGF-like, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12.5, cyto 8.5, plas 3.5,
extr_plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013404)
HIX0013404
HIT000686264 (
ENST00000573852
)
(Scavenger receptor class F member 1; Acetyl LDL receptor; Scavenger receptor expressed by endothelial cells 1; SREC-I; Precursor;)
genome : 1,537,899 - 1,549,006 (11,108)
query : 1 - 2,698 (2,698/2,698)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12.5, cyto 8.5, plas 3.5,
extr_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013404)
HIX0013404
HIT000424607
(
AK291810
)
(Scavenger receptor class F member 1; Acetyl LDL receptor; Scavenger receptor expressed by endothelial cells 1; SREC-I; Precursor;)
genome : 1,537,902 - 1,549,026 (11,125)
query : 1 - 2,678 (2,678/2,678)
11 exons
identity = 0.999
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR002049 : EGF-like, laminin
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR013032 : EGF-like, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, extr_plas 12.5, E.R. 3, cyto 2.5,
cyto_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013404)
HIX0013404
HIT000493361
(
AK298737
)
(Scavenger receptor class F member 1; Acetyl LDL receptor; Scavenger receptor expressed by endothelial cells 1; SREC-I; Precursor;)
genome : 1,537,914 - 1,549,083 (11,170)
query : 1 - 1,805 (1,805/1,805)
8 exons
identity = 0.992
3'(0.998;1.000;0.992;0.988;0.890;1.000;0.972;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013404)
HIX0013404
HIT000427770
(
AK308904
)
(Scavenger receptor class F member 1; Acetyl LDL receptor; Scavenger receptor expressed by endothelial cells 1; SREC-I; Precursor;)
genome : 1,541,434 - 1,543,851 (2,418)
query : 1 - 1,060 (1,060/1,060)
4 exons
identity = 0.997
3'(0.996;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8, plas 7, extr 6, nucl 5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013404)
HIX0013404
HIT000683727 (
ENST00000570902
)
(Scavenger receptor class F member 1; Acetyl LDL receptor; Scavenger receptor expressed by endothelial cells 1; SREC-I; Precursor;)
genome : 1,541,434 - 1,543,851 (2,418)
query : 1 - 1,060 (1,060/1,060)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8, plas 7, extr 6, nucl 5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013404)
HIX0013404
HIT000430236
(
AK311370
)
(Scavenger receptor class F member 1; Acetyl LDL receptor; Scavenger receptor expressed by endothelial cells 1; SREC-I; Precursor;)
genome : 1,543,875 - 1,547,813 (3,939)
query : 2 - 895 (894/895)
3 exons
identity = 0.994
3'(1.000;1.000;0.983)5'
coverage = 0.999
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR002049 : EGF-like, laminin
IPR013032 : EGF-like, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 11, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013404)
HIX0013404
HIT000686866 (
ENST00000574545
)
(Scavenger receptor class F member 1; Acetyl LDL receptor; Scavenger receptor expressed by endothelial cells 1; SREC-I; Precursor;)
genome : 1,543,875 - 1,547,813 (3,939)
query : 1 - 894 (894/894)
3 exons
identity = 0.996
3'(1.000;1.000;0.986)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 11, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013404)
HIX0013404
HIT000686278 (
ENST00000573867
)
(Scavenger receptor class F member 1; Acetyl LDL receptor; Scavenger receptor expressed by endothelial cells 1; SREC-I; Precursor;)
genome : 1,546,614 - 1,549,017 (2,404)
query : 1 - 939 (939/939)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013404)
HIX0202439
HIT000247481
(
AJ404317
)
(Rab-interacting lysosomal protein;)
genome : 1,549,444 - 1,553,342 (3,899)
query : 21 - 1,762 (1,742/1,811)
8 exons
identity = 0.998
3'(0.994;1.000;0.992;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.962
InterPro :
IPR019143 : JNK/Rab-associated protein-1, N-terminal
IPR021563 : Rab interacting lysosomal protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 9, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202439)
HIX0202439
HIT000041339
(
BC031621
)
(Rab-interacting lysosomal protein;)
genome : 1,549,439 - 1,553,186 (3,748)
query : 1 - 1,591 (1,591/1,615)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
InterPro :
IPR019143 : JNK/Rab-associated protein-1, N-terminal
IPR021563 : Rab interacting lysosomal protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, nucl 9, cyto 9, cyto_nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202439)
HIX0202439
HIT000210169 (
NM_031430
)
(Rab-interacting lysosomal protein;)
genome : 1,549,446 - 1,553,392 (3,947)
query : 1 - 1,790 (1,790/1,807)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, nucl 9, cyto 9, cyto_nucl 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202439)
HIX0202439
HIT000242947
(
AF370391
)
(Rab-interacting lysosomal protein;)
genome : 1,549,448 - 1,553,334 (3,887)
query : 2 - 1,725 (1,724/1,744)
8 exons
identity = 0.983
3'(1.000;1.000;1.000;1.000;0.959;0.981;0.938;
0.976)5'
coverage = 0.999
InterPro :
IPR021563 : Rab interacting lysosomal protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202439)
HIX0202439
HIT000086426
(
BC004961
)
(Rab-interacting lysosomal protein;)
genome : 1,549,446 - 1,552,941 (3,496)
query : 1 - 1,339 (1,339/1,356)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR021563 : Rab interacting lysosomal protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto_nucl 7.5, nucl 7, mito 7, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202439)
HIX0202439
HIT000115846 (
ENST00000301336
)
(Rab-interacting lysosomal protein;)
genome : 1,549,444 - 1,553,371 (3,928)
query : 1 - 1,771 (1,771/1,771)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, nucl 9, cyto 9, cyto_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202439)
HIX0202439
HIT000687096 (
ENST00000574810
)
(Rab-interacting lysosomal protein;)
genome : 1,549,444 - 1,552,326 (2,883)
query : 1 - 973 (973/973)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 9, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202439)
HIX0202439
HIT000012369
(
AK055755
)
(Rab-interacting lysosomal protein;)
genome : 1,549,449 - 1,553,371 (3,923)
query : 1 - 1,766 (1,766/1,766)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR019143 : JNK/Rab-associated protein-1, N-terminal
IPR021563 : Rab interacting lysosomal protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, nucl 9, cyto 9, cyto_nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202439)
HIX0202439
HIT000246458
(
AJ278711
)
Representative transcript
(Rab-interacting lysosomal protein;)
genome : 1,549,451 - 1,553,392 (3,942)
query : 1 - 1,785 (1,785/1,785)
8 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR019143 : JNK/Rab-associated protein-1, N-terminal
IPR021563 : Rab interacting lysosomal protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, nucl 9, cyto 9, cyto_nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202439)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK139016
Gallus
sp. (Chicken) : CR390720
Macaca
sp. (Macaque) : ENSMMUT00000003371
Pongo
sp. (Orangutan) : ENSPPYT00000009120
Rattus
sp. (Rat) : ENSRNOT00000005039
Takifugu
sp. (Fugu) : SINFRUT00000167335
Danio
sp. (Zebrafish) : XM_001344147
Monodelphis
sp. (Opossum) : XM_001371213
Equus
sp. (Horse) : XM_001504330
Canis
sp. (Dog) : XM_537768
HIX0202439
HIT000683692 (
ENST00000570858
)
(Rab-interacting lysosomal protein;)
genome : 1,549,487 - 1,552,140 (2,654)
query : 1 - 1,131 (1,131/1,131)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 8, extr 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202439)
HIX0202439
HIT000433633
(
AK314767
)
(Rab-interacting lysosomal protein;)
genome : 1,549,736 - 1,553,371 (3,636)
query : 1 - 1,479 (1,479/1,479)
8 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.996;1.000;0.989;
0.998)5'
coverage = 1.000
InterPro :
IPR019143 : JNK/Rab-associated protein-1, N-terminal
IPR021563 : Rab interacting lysosomal protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, nucl 9, cyto 9, cyto_nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202439)
HIX0202439
HIT000685875 (
ENST00000573398
)
(Rab-interacting lysosomal protein;)
genome : 1,549,794 - 1,552,362 (2,569)
query : 1 - 659 (659/659)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 10, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202439)
HIX0202447
HIT000093466
(
BC034545
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,553,923 - 1,558,784 (4,862)
query : 1 - 1,335 (1,335/1,424)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000555 : JAB1/MPN/MOV34 metalloenzyme domain
IPR012337 : Ribonuclease H-like domain
IPR012984 : PROCT domain
IPR021983 : PRP8 domain IV core
IPR027652 : Pre-mRNA-processing-splicing factor 8
GO :
0000398 : Biological Process : mRNA splicing, via spliceosome
0003676 : Molecular Function : nucleic acid binding
0005515 : Molecular Function : protein binding
0005681 : Cellular Component : spliceosomal complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000330685
(
AK222905
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,553,923 - 1,558,820 (4,898)
query : 1 - 1,371 (1,371/1,423)
7 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;0.993;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000555 : JAB1/MPN/MOV34 metalloenzyme domain
IPR012337 : Ribonuclease H-like domain
IPR012984 : PROCT domain
IPR021983 : PRP8 domain IV core
IPR027652 : Pre-mRNA-processing-splicing factor 8
GO :
0000398 : Biological Process : mRNA splicing, via spliceosome
0003676 : Molecular Function : nucleic acid binding
0005515 : Molecular Function : protein binding
0005681 : Cellular Component : spliceosomal complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 5, nucl 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000029749
(
BC000579
)
(Pre-mRNA-splicing factor 8 homolog;)
genome : 1,553,923 - 1,588,141 (34,219)
query : 1 - 1,388 (1,388/1,420)
9 exons
identity = 0.998
3'(1.000;1.000;1.000;0.941;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR012591 : PRO8NT domain
IPR027652 : Pre-mRNA-processing-splicing factor 8
GO :
0000398 : Biological Process : mRNA splicing, via spliceosome
0005681 : Cellular Component : spliceosomal complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 9, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000068368
(
AF092565
)
Representative transcript
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,553,923 - 1,588,100 (34,178)
query : 1 - 7,220 (7,220/7,239)
43 exons
identity = 0.999
3'(0.994;1.000;1.000;1.000;1.000;0.996;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.995;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000555 : JAB1/MPN/MOV34 metalloenzyme domain
IPR012337 : Ribonuclease H-like domain
IPR012591 : PRO8NT domain
IPR012592 : PROCN domain
IPR012984 : PROCT domain
IPR019580 : Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding
IPR019581 : Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding
IPR019582 : RNA recognition motif, spliceosomal PrP8
IPR021983 : PRP8 domain IV core
IPR027652 : Pre-mRNA-processing-splicing factor 8
GO :
0000398 : Biological Process : mRNA splicing, via spliceosome
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0005515 : Molecular Function : protein binding
0005681 : Cellular Component : spliceosomal complex
0017070 : Molecular Function : U6 snRNA binding
0030623 : Molecular Function : U5 snRNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 7, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC093481
Bos
sp. (Cow) : BC153223
Monodelphis
sp. (Opossum) : ENSMODT00000030289
Oryzias
sp. (Medaka) : ENSORLT00000010083
Pongo
sp. (Orangutan) : ENSPPYT00000009121
Pan
sp. (Chimpanzee) : ENSPTRT00000015737
Tetraodon
sp. (Tetraodon) : GSTENT00005245001
Danio
sp. (Zebrafish) : NM_200976
Takifugu
sp. (Fugu) : SINFRUT00000175661
Macaca
sp. (Macaque) : XM_001117328
Equus
sp. (Horse) : XM_001504332
Gallus
sp. (Chicken) : XM_415805
Canis
sp. (Dog) : XM_863379
HIX0202447
HIT000203044 (
NM_006445
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,553,923 - 1,588,176 (34,254)
query : 1 - 7,295 (7,295/7,311)
43 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 7, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000261333
(
BC064370
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,553,923 - 1,588,141 (34,219)
query : 1 - 7,260 (7,260/7,276)
43 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.995;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000555 : JAB1/MPN/MOV34 metalloenzyme domain
IPR012337 : Ribonuclease H-like domain
IPR012591 : PRO8NT domain
IPR012592 : PROCN domain
IPR012984 : PROCT domain
IPR019580 : Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding
IPR019581 : Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding
IPR019582 : RNA recognition motif, spliceosomal PrP8
IPR021983 : PRP8 domain IV core
IPR027652 : Pre-mRNA-processing-splicing factor 8
GO :
0000398 : Biological Process : mRNA splicing, via spliceosome
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0005515 : Molecular Function : protein binding
0005681 : Cellular Component : spliceosomal complex
0017070 : Molecular Function : U6 snRNA binding
0030623 : Molecular Function : U5 snRNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 7, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000116920 (
ENST00000304992
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,553,923 - 1,588,176 (34,254)
query : 1 - 7,295 (7,295/7,295)
43 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 7, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000684639 (
ENST00000571958
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,553,923 - 1,554,563 (641)
query : 1 - 380 (380/380)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 9, pero 7, nucl 4, cyto 4, mito 4, cyto_nucl 4,
cyto_mito 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000058138
(
AB007510
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,553,924 - 1,588,100 (34,177)
query : 4 - 7,221 (7,218/7,221)
43 exons
identity = 0.997
3'(1.000;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;0.991;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.989;0.996;1.000;1.000;
1.000;0.996;0.989;0.995;0.984;0.994;1.000;
1.000;1.000;0.985;1.000;0.989;1.000;1.000;
0.991;0.992;0.995;0.991;0.994;0.994;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000555 : JAB1/MPN/MOV34 metalloenzyme domain
IPR012337 : Ribonuclease H-like domain
IPR012591 : PRO8NT domain
IPR012592 : PROCN domain
IPR012984 : PROCT domain
IPR019580 : Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding
IPR019581 : Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding
IPR019582 : RNA recognition motif, spliceosomal PrP8
IPR021983 : PRP8 domain IV core
IPR027652 : Pre-mRNA-processing-splicing factor 8
GO :
0000398 : Biological Process : mRNA splicing, via spliceosome
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0005515 : Molecular Function : protein binding
0005681 : Cellular Component : spliceosomal complex
0017070 : Molecular Function : U6 snRNA binding
0030623 : Molecular Function : U5 snRNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 6, extr 1, mito 1, pero 1, cysk 1,
mito_pero 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000490968
(
AK296344
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,553,924 - 1,565,431 (11,508)
query : 1 - 3,390 (3,390/3,390)
19 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.993;1.000;0.995;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000555 : JAB1/MPN/MOV34 metalloenzyme domain
IPR012337 : Ribonuclease H-like domain
IPR012984 : PROCT domain
IPR019580 : Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding
IPR019581 : Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding
IPR021983 : PRP8 domain IV core
IPR027652 : Pre-mRNA-processing-splicing factor 8
GO :
0000398 : Biological Process : mRNA splicing, via spliceosome
0003676 : Molecular Function : nucleic acid binding
0005515 : Molecular Function : protein binding
0005681 : Cellular Component : spliceosomal complex
0017070 : Molecular Function : U6 snRNA binding
0030623 : Molecular Function : U5 snRNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 24, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000014640
(
AK058034
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,553,924 - 1,561,912 (7,989)
query : 1 - 1,897 (1,897/1,897)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000555 : JAB1/MPN/MOV34 metalloenzyme domain
IPR012337 : Ribonuclease H-like domain
IPR012984 : PROCT domain
IPR021983 : PRP8 domain IV core
IPR027652 : Pre-mRNA-processing-splicing factor 8
GO :
0000398 : Biological Process : mRNA splicing, via spliceosome
0003676 : Molecular Function : nucleic acid binding
0005515 : Molecular Function : protein binding
0005681 : Cellular Component : spliceosomal complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 4, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000685207 (
ENST00000572621
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,553,925 - 1,588,131 (34,207)
query : 1 - 7,445 (7,445/7,445)
42 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 7, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000685293 (
ENST00000572723
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,554,134 - 1,555,440 (1,307)
query : 1 - 959 (959/959)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 12, nucl 7, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000687361 (
ENST00000575116
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,554,957 - 1,557,205 (2,249)
query : 1 - 460 (460/460)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.5, nucl 11, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000046042
(
AK126169
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,556,025 - 1,558,274 (2,250)
query : 3 - 2,159 (2,157/2,159)
2 exons
identity = 0.999
3'(0.998;0.999)5'
coverage = 0.999
InterPro :
IPR027652 : Pre-mRNA-processing-splicing factor 8
GO :
0000398 : Biological Process : mRNA splicing, via spliceosome
0005681 : Cellular Component : spliceosomal complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, cyto 11, extr 10, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000688622 (
ENST00000576585
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,556,025 - 1,558,274 (2,250)
query : 1 - 2,157 (2,157/2,157)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, cyto 11, extr 10, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000254894
(
AY486134
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,559,685 - 1,564,122 (4,438)
query : 13 - 1,299 (1,287/1,320)
8 exons
identity = 0.998
3'(1.000;1.000;0.992;0.992;1.000;1.000;1.000;
1.000)5'
coverage = 0.975
InterPro :
IPR012337 : Ribonuclease H-like domain
IPR019580 : Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding
IPR021983 : PRP8 domain IV core
IPR027652 : Pre-mRNA-processing-splicing factor 8
GO :
0000398 : Biological Process : mRNA splicing, via spliceosome
0003676 : Molecular Function : nucleic acid binding
0005681 : Cellular Component : spliceosomal complex
0017070 : Molecular Function : U6 snRNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, nucl 3.5, extr 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000254895
(
AY486135
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,559,685 - 1,564,122 (4,438)
query : 13 - 1,296 (1,284/1,317)
8 exons
identity = 0.994
3'(0.994;1.000;1.000;0.975;1.000;1.000;1.000;
0.992)5'
coverage = 0.975
InterPro :
IPR012337 : Ribonuclease H-like domain
IPR019580 : Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding
IPR021983 : PRP8 domain IV core
IPR027652 : Pre-mRNA-processing-splicing factor 8
GO :
0000398 : Biological Process : mRNA splicing, via spliceosome
0003676 : Molecular Function : nucleic acid binding
0005681 : Cellular Component : spliceosomal complex
0017070 : Molecular Function : U6 snRNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, extr 4, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000686118 (
ENST00000573681
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,562,758 - 1,564,623 (1,866)
query : 1 - 1,044 (1,044/1,044)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 16, nucl 9, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000686159 (
ENST00000573725
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,563,263 - 1,565,332 (2,070)
query : 1 - 749 (749/749)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000685061 (
ENST00000572445
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,564,221 - 1,565,072 (852)
query : 1 - 648 (648/648)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, cyto 14, nucl 11, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000686586 (
ENST00000574217
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,576,235 - 1,576,703 (469)
query : 1 - 310 (310/310)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 13, nucl 11, cyto 11, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000688982 (
ENST00000577001
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,577,832 - 1,588,101 (10,270)
query : 1 - 3,274 (3,274/3,274)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 13, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000688949 (
ENST00000576958
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,577,938 - 1,578,824 (887)
query : 1 - 416 (416/416)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, extr 10, cyto_nucl 9.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000688472 (
ENST00000576407
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,579,602 - 1,580,565 (964)
query : 1 - 566 (566/566)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, mito 12, cyto_nucl 9.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000686151 (
ENST00000573716
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,581,735 - 1,582,502 (768)
query : 19 - 542 (524/542)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.967
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 9.5, cyto_nucl 9.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000687024 (
ENST00000574728
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,583,775 - 1,584,337 (563)
query : 1 - 466 (466/466)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 15.6667, cyto_plas 11.5, nucl 6,
extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0202447
HIT000684108 (
ENST00000571346
)
(Pre-mRNA-processing-splicing factor 8; 220 kDa U5 snRNP-specific protein; PRP8 homolog; Splicing factor Prp8; p220;)
genome : 1,586,315 - 1,588,146 (1,832)
query : 1 - 865 (865/865)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 13, extr 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202447)
HIX0225162
HIT000534982 (
ENST00000437048
)
(Vps53-like, N-terminal domain containing protein.)
genome : 411,908 - 618,096 (206,189)
query : 1 - 13,106 (13,106/13,106)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 6, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225162)
HIX0225162
HIT000559402 (
NM_001128159
)
(Vps53-like, N-terminal domain containing protein.)
genome : 411,908 - 618,096 (206,189)
query : 1 - 13,106 (13,106/13,106)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 6, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225162)
HIX0225162
HIT000096074
(
BC040223
)
(Vacuolar protein sorting-associated protein 53 homolog;)
genome : 418,282 - 618,050 (199,769)
query : 1 - 2,468 (2,468/2,520)
21 exons
identity = 0.998
3'(0.996;0.900;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.990;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.995)5'
coverage = 1.000
InterPro :
IPR007234 : Vps53-like, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225162)
HIX0225162
HIT000016255
(
AK091388
)
(Vacuolar protein sorting-associated protein 53 homolog isoform 1.)
genome : 418,306 - 579,647 (161,342)
query : 1 - 2,641 (2,641/2,641)
18 exons
identity = 0.996
3'(1.000;0.980;1.000;1.000;1.000;1.000;0.987;
1.000;0.993;0.996;1.000;0.993;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 11.5, cyto 9, E.R._mito 5.5,
mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225162)
HIX0225162
HIT000686419 (
ENST00000574029
)
(Vps53-like, N-terminal domain containing protein.)
genome : 420,622 - 618,070 (197,449)
query : 1 - 585 (585/585)
4 exons
identity = 0.991
3'(1.000;0.900;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 13, extr 10, cyto_nucl 4, nucl 3.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225162)
HIX0225162
HIT000688244 (
ENST00000576149
)
(Conserved hypothetical protein.)
genome : 422,193 - 579,647 (157,455)
query : 1 - 2,444 (2,444/2,444)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 10.5, cyto 8.5, mito 6,
E.R._mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225162)
HIX0225162
HIT000557568
(
EU021218
)
Representative transcript
(Vps53-like, N-terminal domain containing protein.)
genome : 422,368 - 617,949 (195,582)
query : 1 - 2,499 (2,499/2,499)
22 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.990;1.000;1.000;1.000;
1.000;1.000;1.000;0.989;1.000;1.000;1.000;
0.989)5'
coverage = 1.000
InterPro :
IPR007234 : Vps53-like, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 6, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225162)
HIX0225162
HIT000683612 (
ENST00000570771
)
(Conserved hypothetical protein.)
genome : 423,095 - 436,233 (13,139)
query : 1 - 366 (366/366)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, mito 11, cyto_nucl 9.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225162)
HIX0013390
HIT000115841 (
ENST00000301329
)
(Glyoxalase domain-containing protein 4.)
genome : 662,337 - 685,581 (23,245)
query : 1 - 2,059 (2,059/2,059)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013390)
HIX0013390
HIT000205849 (
NM_016080
)
(Glyoxalase domain-containing protein 4.)
genome : 662,549 - 685,571 (23,023)
query : 1 - 1,837 (1,837/1,863)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013390)
HIX0013390
HIT000033858
(
BC008605
)
(Glyoxalase domain-containing protein 4.)
genome : 662,562 - 685,496 (22,935)
query : 1 - 1,749 (1,749/1,783)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR025870 : Glyoxalase-like domain
IPR029068 : Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013390)
HIX0013390
HIT000071721
(
AF151908
)
(RNA methyltransferase-like protein 1; EC=2.1.1.-;)
genome : 662,550 - 701,514 (38,965)
query : 5 - 2,580 (2,576/2,580)
11 exons
identity = 0.985
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.979;0.980;0.750)5'
coverage = 0.998
EC number :
EC 2.1.1.-
InterPro :
IPR025870 : Glyoxalase-like domain
IPR029068 : Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013390)
HIX0013390
HIT000072712
(
AF177342
)
Representative transcript
(Glyoxalase domain-containing protein 4;)
genome : 662,570 - 685,519 (22,950)
query : 1 - 1,809 (1,809/1,816)
10 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.996
InterPro :
IPR025870 : Glyoxalase-like domain
IPR029068 : Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29.5, cyto_mito 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013390)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ851686
Mus
sp. (Mouse) : AK033495
Danio
sp. (Zebrafish) : BC081480
Bos
sp. (Cow) : BC151583
Canis
sp. (Dog) : ENSCAFT00000030372
Equus
sp. (Horse) : ENSECAT00000026314
Macaca
sp. (Macaque) : ENSMMUT00000015985
Monodelphis
sp. (Opossum) : ENSMODT00000012798
Oryzias
sp. (Medaka) : ENSORLT00000005892
Pongo
sp. (Orangutan) : ENSPPYT00000009102
Rattus
sp. (Rat) : ENSRNOT00000056279
Tetraodon
sp. (Tetraodon) : GSTENT00030100001
Takifugu
sp. (Fugu) : SINFRUT00000136757
Pan
sp. (Chimpanzee) : XM_511246
HIX0013390
HIT000072713
(
AF177343
)
(Glyoxalase domain-containing protein 4.)
genome : 662,570 - 685,547 (22,978)
query : 1 - 1,792 (1,792/1,797)
9 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.997
InterPro :
IPR025870 : Glyoxalase-like domain
IPR029068 : Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013390)
HIX0013390
HIT000115840 (
ENST00000301328
)
(Glyoxalase domain-containing protein 4;)
genome : 662,570 - 685,519 (22,950)
query : 1 - 1,809 (1,809/1,809)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29.5, cyto_mito 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013390)
HIX0013390
HIT000385213
(
AK226083
)
(Glyoxalase domain-containing protein 4.)
genome : 662,572 - 685,495 (22,924)
query : 1 - 1,738 (1,738/1,738)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR025870 : Glyoxalase-like domain
IPR029068 : Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013390)
HIX0013390
HIT000037360
(
BC015848
)
(Glyoxalase domain-containing protein 4.)
genome : 662,694 - 685,520 (22,827)
query : 5 - 1,645 (1,641/1,675)
9 exons
identity = 0.999
3'(0.999;0.989;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.996
InterPro :
IPR025870 : Glyoxalase-like domain
IPR029068 : Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013390)
HIX0013390
HIT000003962
(
AK001488
)
(Glyoxalase domain-containing protein 4.)
genome : 662,692 - 685,534 (22,843)
query : 1 - 2,737 (2,737/2,737)
7 exons
identity = 0.998
3'(1.000;0.989;0.998;1.000;1.000;1.000;0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 15.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013390)
HIX0013390
HIT000688325 (
ENST00000576239
)
(Glyoxalase domain-containing protein 4.)
genome : 662,692 - 685,534 (22,843)
query : 1 - 2,737 (2,737/2,737)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 15.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013390)
HIX0013390
HIT000064970
(
AF061730
)
(Glyoxalase domain-containing protein 4.)
genome : 662,694 - 685,515 (22,822)
query : 2 - 1,637 (1,636/1,638)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.999
InterPro :
IPR025870 : Glyoxalase-like domain
IPR029068 : Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013390)
HIX0013390
HIT000425112
(
AK292315
)
(Conserved hypothetical protein.)
genome : 662,861 - 685,496 (22,636)
query : 1 - 1,450 (1,450/1,450)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013390)
HIX0013390
HIT000496375
(
AK301751
)
(Glyoxalase domain-containing protein 4.)
genome : 662,965 - 685,520 (22,556)
query : 1 - 1,298 (1,298/1,298)
9 exons
identity = 0.995
3'(0.998;1.000;1.000;1.000;1.000;1.000;0.926;
0.956;1.000)5'
coverage = 1.000
InterPro :
IPR025870 : Glyoxalase-like domain
IPR029068 : Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013390)
HIX0013390
HIT000491208
(
AK296584
)
(Glyoxalase domain-containing protein 4.)
genome : 663,262 - 685,507 (22,246)
query : 1 - 1,314 (1,314/1,314)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR029068 : Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013390)
HIX0013390
HIT000635623 (
ENST00000536578
)
(Glyoxalase domain-containing protein 4.)
genome : 663,262 - 685,507 (22,246)
query : 1 - 1,314 (1,314/1,314)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013390)
HIX0013390
HIT000686874 (
ENST00000574554
)
(Glyoxalase domain-containing protein 4.)
genome : 663,262 - 685,507 (22,246)
query : 1 - 1,314 (1,314/1,314)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013390)
HIX0013390
HIT000687987 (
ENST00000575851
)
(Conserved hypothetical protein.)
genome : 663,338 - 685,520 (22,183)
query : 1 - 1,063 (1,063/1,063)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013390)
HIX0013390
HIT000688482 (
ENST00000576419
)
(Glyoxalase domain-containing protein 4.)
genome : 663,428 - 685,519 (22,092)
query : 1 - 705 (705/705)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013390)
HIX0013390
HIT000687936 (
ENST00000575790
)
(Glyoxalase domain-containing protein 4.)
genome : 673,284 - 685,531 (12,248)
query : 1 - 853 (853/853)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013390)
HIX0013390
HIT000686895 (
ENST00000574581
)
(Glyoxalase domain-containing protein 4.)
genome : 673,669 - 685,495 (11,827)
query : 1 - 677 (677/677)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, extr 10, cyto_mito 10, cyto_nucl 3.5,
cyto_pero 3.16667, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013390)
HIX0013394
HIT000265070
(
BC073845
)
(Conserved hypothetical protein.)
genome : 702,581 - 726,973 (24,393)
query : 1 - 2,406 (2,406/2,490)
6 exons
identity = 0.997
3'(0.997;0.992;0.994;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 7.5, cyto_nucl 7.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013394)
HIX0013394
HIT000331718
(
AY189690
)
(Conserved hypothetical protein.)
genome : 702,585 - 729,298 (26,714)
query : 1 - 2,532 (2,532/2,576)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013394)
HIX0013394
HIT000130267 (
ENST00000336868
)
(Nucleoredoxin; EC=1.8.1.8;)
genome : 702,553 - 883,010 (180,458)
query : 1 - 3,036 (3,036/3,036)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.8.1.8
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 18, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013394)
HIX0013394
HIT000208735 (
NM_022463
)
(Nucleoredoxin; EC=1.8.1.8;)
genome : 702,553 - 882,998 (180,446)
query : 1 - 3,024 (3,024/3,024)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.8.1.8
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 18, cyto 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013394)
HIX0013394
HIT000657234 (
NM_001205319
)
(Nucleoredoxin isoform 2.)
genome : 702,553 - 767,351 (64,799)
query : 1 - 2,681 (2,681/2,681)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.8.1.8
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto 2.5, cyto_nucl 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013394)
HIX0013394
HIT000687947 (
ENST00000575801
)
(Nucleoredoxin isoform 2.)
genome : 702,553 - 767,351 (64,799)
query : 1 - 2,681 (2,681/2,681)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.8.1.8
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto 2.5, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013394)
HIX0013394
HIT000261205
(
BC063828
)
(Nucleoredoxin isoform 2.)
genome : 702,581 - 725,644 (23,064)
query : 1 - 2,251 (2,251/2,265)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.8.1.8
InterPro :
IPR012336 : Thioredoxin-like fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 27, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013394)
HIX0013394
HIT000010723
(
AK027451
)
(Conserved hypothetical protein.)
genome : 702,586 - 729,306 (26,721)
query : 6 - 2,544 (2,539/2,544)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013394)
HIX0013394
HIT000005950
(
AK022676
)
(Conserved hypothetical protein.)
genome : 702,586 - 726,989 (24,404)
query : 4 - 2,420 (2,417/2,420)
6 exons
identity = 0.996
3'(0.995;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, extr 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013394)
HIX0013394
HIT000684396 (
ENST00000571684
)
(Nucleoredoxin isoform 2.)
genome : 703,721 - 729,241 (25,521)
query : 1 - 1,159 (1,159/1,159)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.8.1.8
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 21.5, cyto 16.5, nucl 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013394)
HIX0013394
HIT000492614
(
AK297990
)
(Nucleoredoxin isoform 2.)
genome : 703,721 - 725,698 (21,978)
query : 1 - 985 (985/985)
4 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.8.1.8
InterPro :
IPR012336 : Thioredoxin-like fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 8, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013394)
HIX0013394
HIT000637695 (
ENST00000538650
)
(Nucleoredoxin isoform 2.)
genome : 703,721 - 725,698 (21,978)
query : 1 - 985 (985/985)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.8.1.8
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 8, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013394)
HIX0013394
HIT000636673 (
ENST00000537628
)
(Conserved hypothetical protein.)
genome : 704,008 - 767,337 (63,330)
query : 1 - 1,340 (1,340/1,340)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013394)
HIX0013394
HIT000034283
(
BC009327
)
(Conserved hypothetical protein.)
genome : 704,028 - 767,288 (63,261)
query : 1 - 1,143 (1,143/1,160)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013394)
HIX0013394
HIT000496697
(
AK302073
)
Representative transcript
(Nucleoredoxin isoform 2.)
genome : 704,034 - 767,351 (63,318)
query : 3 - 1,202 (1,200/1,202)
8 exons
identity = 0.998
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
0.990)5'
coverage = 0.998
EC number :
EC 1.8.1.8
InterPro :
IPR012336 : Thioredoxin-like fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto 2.5, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013394)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK048109
Danio
sp. (Zebrafish) : BC095273
Bos
sp. (Cow) : ENSBTAT00000001140
Oryzias
sp. (Medaka) : ENSORLT00000005919
Pongo
sp. (Orangutan) : ENSPPYT00000009104
Tetraodon
sp. (Tetraodon) : GSTENT00030098001
Takifugu
sp. (Fugu) : SINFRUT00000156387
Rattus
sp. (Rat) : XM_001080610
Pan
sp. (Chimpanzee) : XM_001152479
Monodelphis
sp. (Opossum) : XM_001364534
Equus
sp. (Horse) : XM_001502168
Canis
sp. (Dog) : XM_848806
Gallus
sp. (Chicken) : XR_027128
HIX0013395
HIT000217416
(
U01147
)
(Active breakpoint cluster region-related protein;)
genome : 906,759 - 1,083,131 (176,373)
query : 1 - 5,243 (5,243/5,265)
23 exons
identity = 0.996
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.992;0.994;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;0.994)5'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
IPR000198 : Rho GTPase-activating protein domain
IPR000219 : Dbl homology (DH) domain
IPR001331 : Guanine-nucleotide dissociation stimulator, CDC24, conserved site
IPR001849 : Pleckstrin homology domain
IPR008936 : Rho GTPase activation protein
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
0035023 : Biological Process : regulation of Rho protein signal transduction
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 8, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013395)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC058708
Bos
sp. (Cow) : BC148971
Macaca
sp. (Macaque) : ENSMMUT00000031723
Monodelphis
sp. (Opossum) : ENSMODT00000012748
Oryzias
sp. (Medaka) : ENSORLT00000013846
Pongo
sp. (Orangutan) : ENSPPYT00000009107
Pan
sp. (Chimpanzee) : ENSPTRT00000015710
Tetraodon
sp. (Tetraodon) : GSTENT00012694001
Takifugu
sp. (Fugu) : SINFRUT00000174325
Rattus
sp. (Rat) : XM_001080643
Equus
sp. (Horse) : XM_001504257
Canis
sp. (Dog) : XM_863286
HIX0013395
HIT000561802 (
NM_001159746
)
(Active breakpoint cluster region-related protein isoform c.)
genome : 906,758 - 1,090,616 (183,859)
query : 1 - 5,604 (5,604/5,610)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.6667, cyto 14.5, cyto_golg 11.6667,
nucl 11.5, golg 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
&nbs