bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0173971
HIT000512058 (
ENST00000414124
)
(RNA recognition motif domain containing protein.)
genome : 16,520,162 - 16,521,195 (1,034)
query : 1 - 1,034 (1,034/1,034)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173971)
HIX0013574
HIT000317465 (
NM_020787
)
(Zinc finger protein 624;)
genome : 16,524,048 - 16,557,167 (33,120)
query : 1 - 4,244 (4,244/4,250)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013574)
HIX0013574
HIT000119023 (
ENST00000311331
)
(Zinc finger protein 624;)
genome : 16,524,051 - 16,557,167 (33,117)
query : 1 - 4,241 (4,241/4,241)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013574)
HIX0013574
HIT000249689
(
AK131401
)
Representative transcript
(Zinc finger protein 624;)
genome : 16,524,051 - 16,557,158 (33,108)
query : 1 - 4,225 (4,225/4,225)
6 exons
identity = 0.997
3'(0.997;0.990;1.000;1.000;1.000;0.988)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013574)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : BC085827
Macaca
sp. (Macaque) : ENSMMUT00000007418
Monodelphis
sp. (Opossum) : ENSMODT00000005519
Pongo
sp. (Orangutan) : ENSPPYT00000009388
Takifugu
sp. (Fugu) : SINFRUT00000170090
Equus
sp. (Horse) : XM_001503438
Pan
sp. (Chimpanzee) : XM_511785
Canis
sp. (Dog) : XM_546639
Bos
sp. (Cow) : XM_585787
HIX0013574
HIT000001064
(
AB037770
)
(Zinc finger protein 624.)
genome : 16,524,051 - 16,528,095 (4,045)
query : 18 - 4,055 (4,038/4,055)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013574)
HIX0013574
HIT000691456 (
ENST00000579528
)
(Zinc finger protein 624.)
genome : 16,524,060 - 16,528,101 (4,042)
query : 1 - 4,042 (4,042/4,042)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013574)
HIX0013574
HIT000337495
(
BC103943
)
(Zinc finger protein 624.)
genome : 16,524,312 - 16,527,873 (3,562)
query : 1 - 3,562 (3,562/3,562)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013574)
HIX0013574
HIT000337496
(
BC103944
)
(Zinc finger protein 624.)
genome : 16,524,312 - 16,527,873 (3,562)
query : 1 - 3,562 (3,562/3,562)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013574)
HIX0013574
HIT000337497
(
BC103945
)
(Zinc finger protein 624.)
genome : 16,524,312 - 16,527,873 (3,562)
query : 1 - 3,563 (3,563/3,563)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013574)
HIX0013574
HIT000337498
(
BC103946
)
(Zinc finger protein 624.)
genome : 16,524,312 - 16,527,873 (3,562)
query : 1 - 3,562 (3,562/3,562)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013574)
HIX0013574
HIT000691903 (
ENST00000579983
)
(Conserved hypothetical protein.)
genome : 16,534,658 - 16,537,272 (2,615)
query : 18 - 486 (469/486)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.965
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, cyto_mito 12.1667, extr 5,
cyto_nucl 3.83333, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013574)
HIX0013574
HIT000695644 (
ENST00000583766
)
(Zinc finger protein 624.)
genome : 16,537,176 - 16,557,170 (19,995)
query : 1 - 548 (548/548)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 7, nucl 6.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013574)
HIX0013574
HIT000521794 (
ENST00000423860
)
(Zinc finger protein 624.)
genome : 16,537,220 - 16,557,152 (19,933)
query : 1 - 605 (605/605)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 4.5, nucl 4, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013574)
HIX0224764
HIT000689519 (
ENST00000577569
)
(Hypothetical short protein.)
genome : 16,557,218 - 16,558,101 (884)
query : 1 - 771 (771/771)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 9, cyto_nucl 8.5, extr_plas 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224764)
HIX0224848
HIT000691924 (
ENST00000580004
)
(Conserved hypothetical protein.)
genome : 16,569,421 - 16,570,432 (1,012)
query : 1 - 1,012 (1,012/1,012)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto_nucl 5, nucl 4, cyto 4, extr 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224848)
HIX0202622
HIT000517853 (
ENST00000419919
)
(Ribonuclease H domain containing protein.)
genome : 16,586,752 - 16,587,541 (790)
query : 1 - 790 (790/790)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.5, mito 10, mito_nucl 10, nucl 9.5,
cyto_mito 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202622)
HIX0019825
HIT000582416 (
ENST00000478303
)
(Hypothetical protein.)
genome : 16,592,851 - 16,598,800 (5,950)
query : 1 - 935 (935/935)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, nucl 9.5, cyto_nucl 8, extr 6, cyto 5.5,
E.R._mito 5.5, mito_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019825)
HIX0019825
HIT000133251 (
ENST00000340621
)
(Conserved hypothetical protein.)
genome : 16,593,546 - 16,615,462 (21,917)
query : 1 - 2,214 (2,214/2,214)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13.8333, cyto_golg 10.1667,
nucl 6.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019825)
HIX0019825
HIT000482363 (
ENST00000399273
)
(Protein of unknown function DUF3496 family protein.)
genome : 16,593,555 - 16,681,195 (87,641)
query : 1 - 8,686 (8,686/8,686)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 19.1667, cyto 10,
cyto_golg 7.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019825)
HIX0019825
HIT000534308 (
ENST00000436374
)
(Conserved hypothetical protein.)
genome : 16,593,555 - 16,612,062 (18,508)
query : 1 - 941 (941/941)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 10.5, mito 7, nucl 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019825)
HIX0019825
HIT000482354 (
ENST00000399264
)
(Conserved hypothetical protein.)
genome : 16,593,563 - 16,610,712 (17,150)
query : 1 - 2,815 (2,815/2,815)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 11, mito 6, nucl 5.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019825)
HIX0019825
HIT000313869 (
ENST00000360495
)
(Conserved hypothetical protein.)
genome : 16,593,639 - 16,678,313 (84,675)
query : 1 - 5,545 (5,545/5,545)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 19, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019825)
HIX0019825
HIT000313894 (
ENST00000360524
)
(Protein of unknown function DUF3496 family protein.)
genome : 16,593,639 - 16,678,313 (84,675)
query : 1 - 5,830 (5,830/5,830)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_mito 8.5, nucl 6, mito_pero 5.83333,
pero 4.5, mito 4, plas 2.5, extr_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019825)
HIX0019825
HIT000502652
(
BC144224
)
(Coiled-coil domain-containing protein 144A;)
genome : 16,593,639 - 16,678,313 (84,675)
query : 1 - 5,544 (5,544/5,544)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 19, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019825)
HIX0019825
HIT000502653
(
BC144225
)
(Coiled-coil domain-containing protein 144A;)
genome : 16,593,639 - 16,678,313 (84,675)
query : 1 - 5,830 (5,830/5,830)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.999;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR021885 : Protein of unknown function DUF3496
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_mito 8.5, nucl 6, mito_pero 5.83333,
pero 4.5, mito 4, plas 2.5, extr_plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019825)
HIX0019825
HIT000391070
(
BC133019
)
Representative transcript
(Coiled-coil domain-containing protein 144A;)
genome : 16,593,639 - 16,678,311 (84,673)
query : 1 - 5,828 (5,828/5,828)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991;1.000)3'
coverage = 1.000
InterPro :
IPR021885 : Protein of unknown function DUF3496
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_mito 8.5, nucl 6, mito_pero 5.83333,
pero 4.5, mito 4, plas 2.5, extr_plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019825)
HIX0019825
HIT000486169 (
NM_014695
)
(Protein of unknown function DUF3496 family protein.)
genome : 16,593,639 - 16,678,311 (84,673)
query : 1 - 5,828 (5,828/5,828)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_mito 8.5, nucl 6, mito_pero 5.83333,
pero 4.5, mito 4, plas 2.5, extr_plas 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019825)
HIX0019825
HIT000553943 (
ENST00000456009
)
(Protein of unknown function DUF3496 family protein.)
genome : 16,593,639 - 16,667,558 (73,920)
query : 1 - 3,541 (3,541/3,541)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 19, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019825)
HIX0019825
HIT000518871 (
ENST00000420937
)
(Conserved hypothetical protein.)
genome : 16,594,026 - 16,612,216 (18,191)
query : 1 - 534 (534/534)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 8, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019825)
HIX0224877
HIT000692903_01 (
ENST00000580993
)
(Hypothetical short protein.)
genome : 16,595,169 - 16,595,448 (280)
query : 1 - 280 (280/280)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, mito_pero 13.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224877)
HIX0019825
HIT000526884 (
ENST00000428950
)
(Conserved hypothetical protein.)
genome : 16,608,598 - 16,612,773 (4,176)
query : 1 - 780 (780/780)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, mito 10, extr 4, pero 2, golg 2, extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019825)
HIX0019825
HIT000045844
(
AK125971
)
(Protein of unknown function DUF3496 family protein.)
genome : 16,610,828 - 16,668,177 (57,350)
query : 1 - 3,373 (3,373/3,373)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR021885 : Protein of unknown function DUF3496
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 10, cyto_mito 5.83333,
cyto_golg 5.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019825)
HIX0019825
HIT000125584 (
ENST00000328495
)
(Protein of unknown function DUF3496 family protein.)
genome : 16,610,828 - 16,668,177 (57,350)
query : 1 - 3,375 (3,375/3,375)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 9.5, cyto_mito 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019825)
HIX0019825
HIT000568586 (
ENST00000463809
)
(Conserved hypothetical protein.)
genome : 16,623,831 - 16,631,209 (7,379)
query : 1 - 591 (591/591)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 5.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019825)
HIX0019825
HIT000000282
(
AB011137
)
(Coiled-coil domain-containing protein 144A;)
genome : 16,634,531 - 16,670,608 (36,078)
query : 1 - 5,140 (5,140/5,140)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.998;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019825)
HIX0019825
HIT000574560 (
ENST00000470068
)
(Protein of unknown function DUF3496 family protein.)
genome : 16,634,531 - 16,670,608 (36,078)
query : 1 - 5,142 (5,142/5,142)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.999;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019825)
HIX0173647
HIT000539405_01 (
ENST00000441471
)
(Hypothetical protein.)
genome : 16,648,945 - 16,649,400 (456)
query : 1 - 456 (456/456)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173647)
HIX0173647
HIT000511665 (
ENST00000413731
)
(Regulator of nonsense-mediated decay, UPF3 domain containing protein.)
genome : 16,648,950 - 16,650,075 (1,126)
query : 1 - 1,126 (1,126/1,126)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173647)
HIX0224259
HIT000515458 (
ENST00000417524
)
(Conserved hypothetical protein.)
genome : 16,689,803 - 16,701,743 (11,941)
query : 1 - 1,014 (1,014/1,014)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 12, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224259)
HIX0224259
HIT000430562
(
AK311696
)
(Conserved hypothetical protein.)
genome : 16,689,961 - 16,699,440 (9,480)
query : 1 - 945 (945/945)
4 exons
identity = 0.989
5'(0.995;0.964;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 10, cyto_mito 9, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224259)
HIX0224259
HIT000690922 (
ENST00000578986
)
(Conserved hypothetical protein.)
genome : 16,690,018 - 16,699,466 (9,449)
query : 1 - 730 (730/730)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 10, cyto_mito 9, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224259)
HIX0224259
HIT000398445 (
NR_003190
)
(Conserved hypothetical protein.)
genome : 16,690,206 - 16,707,819 (17,614)
query : 1 - 3,901 (3,901/3,901)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 7.5, cyto_nucl 5.5, nucl 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224259)
HIX0224259
HIT000476473 (
ENST00000393005
)
(Peptidase C19, ubiquitin carboxyl-terminal hydrolase domain containing protein.)
genome : 16,690,304 - 16,707,769 (17,466)
query : 1 - 3,846 (3,846/3,846)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 4.5, cyto_nucl 4.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224259)
HIX0224259
HIT000500079
(
AK316466
)
(Conserved hypothetical protein.)
genome : 16,691,073 - 16,704,440 (13,368)
query : 1 - 1,370 (1,370/1,370)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.989)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 7.5, cyto_nucl 5.5, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224259)
HIX0224259
HIT000543517 (
ENST00000445583
)
(Conserved hypothetical protein.)
genome : 16,691,073 - 16,704,440 (13,368)
query : 1 - 1,370 (1,370/1,370)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 7.5, cyto_nucl 5.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224259)
HIX0224259
HIT000095615
(
BC039345
)
(Conserved hypothetical protein.)
genome : 16,691,354 - 16,705,894 (14,541)
query : 1 - 1,733 (1,733/1,748)
8 exons
identity = 0.997
5'(1.000;1.000;1.000;0.997;1.000;0.995;1.000;
0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito 8, extr 3, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224259)
HIX0224259
HIT000260913
(
BC063453
)
Representative transcript
(Conserved hypothetical protein.)
genome : 16,691,371 - 16,719,852 (28,482)
query : 1 - 3,246 (3,246/3,297)
11 exons
identity = 0.986
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998;0.994;0.831;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 7.5, cyto_nucl 5.5, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224259)
HIX0224259
HIT000714463 (
ENST00000602730
)
(Conserved hypothetical protein.)
genome : 16,691,371 - 16,719,854 (28,484)
query : 1 - 3,243 (3,243/3,243)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 7.5, cyto_nucl 5.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224259)
HIX0224805
HIT000690648 (
ENST00000578710
)
(Conserved hypothetical protein.)
genome : 16,691,562 - 16,692,548 (987)
query : 1 - 686 (686/686)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 21, plas 4, mito 2.5, extr_plas 2.5, E.R._mito 2,
cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224805)
HIX0059664
HIT000562994 (
NR_026810
)
(Conserved hypothetical protein.)
genome : 16,692,057 - 16,693,815 (1,759)
query : 1 - 1,759 (1,759/1,759)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 7, cyto_nucl 2, nucl 1.5, cyto 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059664)
HIX0059664
HIT000335871
(
BC098294
)
(Conserved hypothetical protein.)
genome : 16,692,193 - 16,693,815 (1,623)
query : 1 - 1,623 (1,623/1,623)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 7, cyto_nucl 2, nucl 1.5, cyto 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059664)
HIX0059664
HIT000335925
(
BC098363
)
Representative transcript
(Conserved hypothetical protein.)
genome : 16,692,193 - 16,693,815 (1,623)
query : 1 - 1,623 (1,623/1,623)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 7, cyto_nucl 2, nucl 1.5, cyto 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059664)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000009389
HIX0059664
HIT000694108 (
ENST00000582212
)
(Conserved hypothetical protein.)
genome : 16,692,215 - 16,692,721 (507)
query : 1 - 507 (507/507)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 7, cyto_nucl 2, nucl 1.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059664)
HIX0224259
HIT000689553 (
ENST00000577603
)
(Conserved hypothetical protein.)
genome : 16,694,977 - 16,699,518 (4,542)
query : 1 - 553 (553/553)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 12, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224259)
HIX0224259
HIT000554005 (
ENST00000456071
)
(Conserved hypothetical protein.)
genome : 16,695,291 - 16,703,442 (8,152)
query : 1 - 736 (736/736)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 6, extr 2, cyto 2, golg 2, cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224259)
HIX0224259
HIT000542492 (
ENST00000444558
)
(Conserved hypothetical protein.)
genome : 16,697,780 - 16,704,940 (7,161)
query : 1 - 3,734 (3,734/3,751)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 7, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224259)
HIX0224259
HIT000693909 (
ENST00000582011
)
(Conserved hypothetical protein.)
genome : 16,697,849 - 16,701,834 (3,986)
query : 1 - 576 (576/576)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, extr 7, nucl 2.5, cyto_nucl 2.5, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224259)
HIX0224259
HIT000535151 (
ENST00000437217
)
(Conserved hypothetical protein.)
genome : 16,697,908 - 16,701,836 (3,929)
query : 1 - 538 (538/538)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 5.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224259)
HIX0224259
HIT000606655 (
ENST00000506594
)
(Conserved hypothetical protein.)
genome : 16,699,354 - 16,705,741 (6,388)
query : 1 - 1,167 (1,167/1,167)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 7.5, cyto_nucl 5.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224259)
HIX0224259
HIT000253207
(
AY363305
)
(Conserved hypothetical protein.)
genome : 16,701,323 - 16,707,769 (6,447)
query : 1 - 3,234 (3,234/3,259)
4 exons
identity = 0.997
5'(1.000;1.000;1.000;0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 7.5, cyto_nucl 5.5, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224259)
HIX0224259
HIT000134375 (
ENST00000341745
)
(Conserved hypothetical protein.)
genome : 16,701,323 - 16,707,769 (6,447)
query : 1 - 3,233 (3,233/3,233)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 7.5, cyto_nucl 5.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224259)
HIX0224259
HIT000497569
(
AK302945
)
(Conserved hypothetical protein.)
genome : 16,701,600 - 16,705,656 (4,057)
query : 1 - 843 (843/843)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 7.5, cyto_nucl 5.5, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224259)
HIX0224259
HIT000694781 (
ENST00000582895
)
(Hypothetical short protein.)
genome : 16,707,941 - 16,709,021 (1,081)
query : 1 - 302 (302/302)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224259)
HIX0224259
HIT000694586 (
ENST00000582696
)
(FAD-binding, type 1 domain containing protein.)
genome : 16,715,761 - 16,715,965 (205)
query : 1 - 205 (205/205)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, nucl 18, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224259)
HIX0039229
HIT000515444 (
ENST00000417510
)
(Intermediate filament protein family protein.)
genome : 16,721,297 - 16,725,893 (4,597)
query : 1 - 1,873 (1,873/1,873)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 10, cyto 6.5, extr 6, golg 3,
extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039229)
HIX0039229
HIT000696349 (
ENST00000584481
)
(Intermediate filament protein family protein.)
genome : 16,721,306 - 16,722,677 (1,372)
query : 1 - 715 (715/715)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 3.5, cyto_nucl 3.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039229)
HIX0039229
HIT000523626 (
ENST00000425692
)
(Intermediate filament protein family protein.)
genome : 16,721,456 - 16,725,806 (4,351)
query : 1 - 1,426 (1,426/1,426)
8 exons
identity = 0.996
3'(1.000;1.000;0.982;1.000;1.000;1.000;0.977;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 11, cyto 7.5, extr 4, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039229)
HIX0039229
HIT000695626 (
ENST00000583748
)
(Intermediate filament protein family protein.)
genome : 16,722,827 - 16,725,442 (2,616)
query : 1 - 569 (569/569)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, nucl 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039229)
HIX0173645
HIT000689970 (
ENST00000578023
)
(Keratin, type I cytoskeletal 16; Cytokeratin-16; CK-16; Keratin-16; K16;)
genome : 16,733,157 - 16,733,931 (775)
query : 1 - 681 (681/681)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 8.5, cyto_nucl 7, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173645)
HIX0173645
HIT000512607 (
ENST00000414673
)
(Keratin, type I cytoskeletal 15; Cytokeratin-15; CK-15; Keratin-15; K15; Type I keratin Ka15;)
genome : 16,733,313 - 16,736,067 (2,755)
query : 1 - 1,423 (1,423/1,423)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, extr 11, cyto_nucl 10, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173645)
HIX0173645
HIT000482163 (
ENST00000399048
)
(Keratin, type I cytoskeletal 15; Cytokeratin-15; CK-15; Keratin-15; K15; Type I keratin Ka15;)
genome : 16,733,797 - 16,736,147 (2,351)
query : 1 - 1,575 (1,575/1,575)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 17.5, nucl 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173645)
HIX0173645
HIT000498928
(
AK304304
)
Representative transcript
(Keratin, type I cytoskeletal 15; Cytokeratin-15; CK-15; Keratin-15; K15; Type I keratin Ka15;)
genome : 16,733,797 - 16,736,147 (2,351)
query : 1 - 1,575 (1,575/1,575)
5 exons
identity = 0.995
3'(0.995;1.000;0.987;1.000;0.995)5'
coverage = 1.000
InterPro :
IPR001664 : Intermediate filament protein
IPR002957 : Keratin, type I
GO :
0005198 : Molecular Function : structural molecule activity
0005882 : Cellular Component : intermediate filament
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16.5, nucl 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173645)
HIX0173645
HIT000657902 (
NR_029392
)
(Keratin, type I cytoskeletal 15; Cytokeratin-15; CK-15; Keratin-15; K15; Type I keratin Ka15;)
genome : 16,733,797 - 16,736,147 (2,351)
query : 1 - 1,575 (1,575/1,575)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 17.5, nucl 12.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173645)
HIX0173645
HIT000696479 (
ENST00000584612
)
(Keratin, type I cytoskeletal 16; Cytokeratin-16; CK-16; Keratin-16; K16;)
genome : 16,734,447 - 16,744,006 (9,560)
query : 1 - 794 (794/794)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11, extr 10, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173645)
HIX0173645
HIT000690997 (
ENST00000579062
)
(Keratin, type I cytoskeletal 16; Cytokeratin-16; CK-16; Keratin-16; K16;)
genome : 16,734,753 - 16,736,144 (1,392)
query : 1 - 563 (563/563)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 10, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173645)
HIX0173747
HIT000437612_05
(
DQ571081
)
Representative transcript
(Non-protein coding transcript.)
genome : 16,738,498 - 16,738,527 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173747)
HIX0059689
HIT000482311 (
ENST00000399211
)
(Intermediate filament protein family protein.)
genome : 16,744,057 - 16,749,197 (5,141)
query : 1 - 1,546 (1,546/1,546)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, nucl 9, cyto_nucl 8.33333, mito_pero 8.33333,
cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059689)
HIX0059689
HIT000693945 (
ENST00000582047
)
(Intermediate filament protein family protein.)
genome : 16,744,853 - 16,745,763 (911)
query : 1 - 726 (726/726)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059689)
HIX0059689
HIT000133596 (
ENST00000340966
)
(Intermediate filament protein family protein.)
genome : 16,745,430 - 16,749,195 (3,766)
query : 1 - 1,174 (1,174/1,174)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 16, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059689)
HIX0059689
HIT000694120 (
ENST00000582224
)
(Intermediate filament protein family protein.)
genome : 16,746,264 - 16,747,884 (1,621)
query : 1 - 583 (583/583)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 13, cyto 12, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059689)
HIX0059689
HIT000689403 (
ENST00000577449
)
(Intermediate filament protein family protein.)
genome : 16,746,801 - 16,748,913 (2,113)
query : 1 - 636 (636/636)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 7.5, mito_pero 7, E.R._mito 6.16667,
extr 5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059689)
HIX0059689
HIT000692279 (
ENST00000580363
)
(Intermediate filament protein family protein.)
genome : 16,747,179 - 16,749,195 (2,017)
query : 1 - 620 (620/620)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, mito 8, cyto_nucl 6.66667, cyto 5.5,
cyto_pero 5.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059689)
HIX0059752
HIT000691866 (
ENST00000579946
)
(Conserved hypothetical protein.)
genome : 16,750,949 - 16,756,090 (5,142)
query : 1 - 2,555 (2,555/2,555)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20.5, cyto_mito 12.5, extr 7, cyto 3.5,
extr_plas 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059752)
HIX0059752
HIT000691284 (
ENST00000579355
)
(Conserved hypothetical protein.)
genome : 16,750,949 - 16,751,727 (779)
query : 1 - 621 (621/621)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059752)
HIX0059752
HIT000527379 (
ENST00000429445
)
(Intermediate filament protein family protein.)
genome : 16,751,166 - 16,755,222 (4,057)
query : 1 - 819 (819/819)
6 exons
identity = 0.989
3'(0.977;0.940;0.992;1.000;0.994;0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_mito 5.66667, cyto_nucl 5.5, cyto 5,
mito 4.5, cyto_pero 4.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059752)
HIX0059752
HIT000689984 (
ENST00000578037
)
(Intermediate filament protein family protein.)
genome : 16,751,438 - 16,753,672 (2,235)
query : 1 - 593 (593/593)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 5.5, cyto_mito 4.83333, cyto 3,
cyto_pero 2.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059752)
HIX0059752
HIT000696025 (
ENST00000584151
)
(Hypothetical protein.)
genome : 16,754,816 - 16,756,091 (1,276)
query : 1 - 719 (719/719)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 8.5, cyto_nucl 7.5, E.R._mito 7.5,
mito_pero 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059752)
HIX0059752
HIT000691292 (
ENST00000579363
)
(Hypothetical protein.)
genome : 16,754,829 - 16,755,976 (1,148)
query : 1 - 563 (563/563)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12.5, extr 7, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059752)
HIX0173795
HIT000443286_05
(
DQ576755
)
Representative transcript
(Non-protein coding transcript.)
genome : 16,756,474 - 16,756,503 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173795)
HIX0173999
HIT000520243 (
ENST00000422309
)
(ADF-H/Gelsolin-like domain containing protein.)
genome : 16,757,249 - 16,757,623 (375)
query : 1 - 375 (375/375)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 13.8333, cyto_plas 11.3333,
nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173999)
HIX0224901
HIT000693789 (
ENST00000581889
)
(Conserved hypothetical protein.)
genome : 16,796,512 - 16,796,743 (232)
query : 1 - 232 (232/232)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, nucl 5, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224901)
HIX0224302
HIT000522173 (
ENST00000424239
)
(Rab-GTPase-TBC domain containing protein.)
genome : 16,827,310 - 16,835,819 (8,510)
query : 1 - 1,573 (1,573/1,573)
12 exons
identity = 0.991
3'(1.000;1.000;1.000;1.000;1.000;0.983;0.946;
0.981;0.975;0.917;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224302)
HIX0224302
HIT000389750
(
BC128223
)
Representative transcript
(Conserved hypothetical protein.)
genome : 16,832,595 - 16,835,820 (3,226)
query : 6 - 1,092 (1,087/1,092)
4 exons
identity = 0.999
3'(1.000;0.999;1.000;1.000)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 8.16667, cyto 7.5, nucl 5.5,
cyto_pero 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224302)
HIX0224302
HIT000694652 (
ENST00000582764
)
(Conserved hypothetical protein.)
genome : 16,832,595 - 16,835,820 (3,226)
query : 1 - 1,087 (1,087/1,087)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 8.16667, cyto 7.5, nucl 5.5,
cyto_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224302)
HIX0173830
HIT000447680_04
(
DQ581149
)
Representative transcript
(Non-protein coding transcript.)
genome : 16,840,342 - 16,840,373 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173830)
HIX0013576
HIT000062719
(
AF023614
)
Representative transcript
(Tumor necrosis factor receptor superfamily member 13B; Transmembrane activator and CAML interactor; AltName: CD_antigen=CD267;)
genome : 16,842,398 - 16,875,402 (33,005)
query : 1 - 1,358 (1,358/1,377)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR015384 : TACI, cysteine-rich domain
IPR022317 : Tumour necrosis factor receptor 13B
GO :
0005887 : Cellular Component : integral component of plasma membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, mito 5, E.R. 4, lyso 2, extr 1, nucl 1,
cyto 1, cyto_nucl 1, golg 1, cyto_golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013576)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AF227558
Mus
sp. (Mouse) : AK004668
Gallus
sp. (Chicken) : AM492777
Pongo
sp. (Orangutan) : ENSPPYT00000009392
Rattus
sp. (Rat) : XM_001077750
Pan
sp. (Chimpanzee) : XM_001161317
Monodelphis
sp. (Opossum) : XM_001370846
Equus
sp. (Horse) : XM_001918218
Canis
sp. (Dog) : XM_846864
Bos
sp. (Cow) : XM_870282
HIX0013576
HIT000204184 (
NM_012452
)
(Tumor necrosis factor receptor superfamily member 13B; Transmembrane activator and CAML interactor; AltName: CD_antigen=CD267;)
genome : 16,842,398 - 16,875,402 (33,005)
query : 1 - 1,358 (1,358/1,377)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, mito 5, E.R. 4, lyso 2, extr 1, nucl 1,
cyto 1, cyto_nucl 1, golg 1, cyto_golg 1
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013576)
HIX0013576
HIT000108064 (
ENST00000261652
)
(Tumor necrosis factor receptor superfamily member 13B; Transmembrane activator and CAML interactor; AltName: CD_antigen=CD267;)
genome : 16,842,399 - 16,875,402 (33,004)
query : 1 - 1,357 (1,357/1,357)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, mito 5, E.R. 4, lyso 2, extr 1, nucl 1,
cyto 1, cyto_nucl 1, golg 1, cyto_golg 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013576)
HIX0013576
HIT000022116
(
AK097261
)
(Tumor necrosis factor receptor superfamily member 13B; Transmembrane activator and CAML interactor; AltName: CD_antigen=CD267;)
genome : 16,842,399 - 16,844,376 (1,978)
query : 1 - 1,978 (1,978/1,978)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 6, cyto_nucl 4.66667, nucl 4.5,
cyto 3.5, cyto_pero 3.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013576)
HIX0013576
HIT000690945 (
ENST00000579009
)
(Tumor necrosis factor receptor superfamily member 13B; Transmembrane activator and CAML interactor; AltName: CD_antigen=CD267;)
genome : 16,842,399 - 16,844,376 (1,978)
query : 1 - 1,978 (1,978/1,978)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 6, cyto_nucl 4.66667, nucl 4.5,
cyto 3.5, cyto_pero 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013576)
HIX0013576
HIT000331233
(
AK223453
)
(Tumor necrosis factor receptor superfamily member 13B; Transmembrane activator and CAML interactor; AltName: CD_antigen=CD267;)
genome : 16,842,535 - 16,875,402 (32,868)
query : 1 - 1,221 (1,221/1,221)
5 exons
identity = 0.998
3'(1.000;0.995;1.000;0.993;1.000)5'
coverage = 1.000
InterPro :
IPR015384 : TACI, cysteine-rich domain
IPR022317 : Tumour necrosis factor receptor 13B
GO :
0005887 : Cellular Component : integral component of plasma membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 15, mito 5, E.R. 4, extr 3, cyto_mito 3,
mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013576)
HIX0013576
HIT000339438
(
BC109392
)
(Tumor necrosis factor receptor superfamily member 13B; Transmembrane activator and CAML interactor; AltName: CD_antigen=CD267;)
genome : 16,842,758 - 16,875,401 (32,644)
query : 1 - 859 (859/859)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR015384 : TACI, cysteine-rich domain
IPR022317 : Tumour necrosis factor receptor 13B
GO :
0005887 : Cellular Component : integral component of plasma membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, E.R. 4, extr 3, lyso 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013576)
HIX0013576
HIT000695667 (
ENST00000583789
)
(Tumor necrosis factor receptor superfamily member 13B; Transmembrane activator and CAML interactor; AltName: CD_antigen=CD267;)
genome : 16,842,758 - 16,875,401 (32,644)
query : 1 - 859 (859/859)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, E.R. 4, extr 3, lyso 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013576)
HIX0013576
HIT000432168
(
AK313302
)
(Tumor necrosis factor receptor superfamily member 13B; Transmembrane activator and CAML interactor; AltName: CD_antigen=CD267;)
genome : 16,842,861 - 16,875,421 (32,561)
query : 2 - 915 (914/915)
5 exons
identity = 0.997
3'(0.992;1.000;1.000;0.993;1.000)5'
coverage = 0.999
InterPro :
IPR015384 : TACI, cysteine-rich domain
IPR022317 : Tumour necrosis factor receptor 13B
GO :
0005887 : Cellular Component : integral component of plasma membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, mito 5, E.R. 4, lyso 2, extr 1, nucl 1,
cyto 1, cyto_nucl 1, golg 1, cyto_golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013576)
HIX0013576
HIT000251525
(
AY302137
)
(Tumor necrosis factor receptor superfamily member 13B; Transmembrane activator and CAML interactor; AltName: CD_antigen=CD267;)
genome : 16,842,861 - 16,875,389 (32,529)
query : 1 - 744 (744/744)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR015384 : TACI, cysteine-rich domain
IPR022317 : Tumour necrosis factor receptor 13B
GO :
0005887 : Cellular Component : integral component of plasma membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, E.R. 4, extr 3, lyso 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013576)
HIX0013576
HIT000693519 (
ENST00000581616
)
(Tumor necrosis factor receptor superfamily member 13B; Transmembrane activator and CAML interactor; AltName: CD_antigen=CD267;)
genome : 16,843,820 - 16,875,392 (31,573)
query : 1 - 1,420 (1,420/1,420)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 14.3333, extr 6, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013576)
HIX0013576
HIT000495656
(
AK301032
)
(Tumor necrosis factor receptor superfamily member 13B; Transmembrane activator and CAML interactor; AltName: CD_antigen=CD267;)
genome : 16,843,822 - 16,875,392 (31,571)
query : 1 - 1,418 (1,418/1,418)
4 exons
identity = 0.999
3'(1.000;1.000;0.993;1.000)5'
coverage = 1.000
InterPro :
IPR015384 : TACI, cysteine-rich domain
IPR022317 : Tumour necrosis factor receptor 13B
GO :
0005887 : Cellular Component : integral component of plasma membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 14.3333, extr 6, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013576)
HIX0019521
HIT000022053
(
AK097198
)
Representative transcript
(Conserved hypothetical protein.)
genome : 16,879,313 - 16,884,667 (5,355)
query : 1 - 2,200 (2,200/2,200)
3 exons
identity = 0.996
3'(0.996;0.996;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019521)
HIX0019521
HIT000526076 (
ENST00000428142
)
(Conserved hypothetical protein.)
genome : 16,879,313 - 16,884,667 (5,355)
query : 1 - 2,201 (2,201/2,201)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019521)
HIX0224589
HIT000517085 (
ENST00000419151
)
(Conserved hypothetical protein.)
genome : 16,891,643 - 16,893,491 (1,849)
query : 1 - 400 (400/400)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 8, cyto_nucl 7.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224589)
HIX0039435
HIT000094811
(
BC037339
)
Representative transcript
(Conserved hypothetical protein.)
genome : 16,915,230 - 16,918,304 (3,075)
query : 1 - 3,077 (3,077/3,092)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039435)
HIX0039435
HIT000676074 (
ENST00000562897
)
(Conserved hypothetical protein.)
genome : 16,915,228 - 16,918,304 (3,077)
query : 1 - 3,077 (3,077/3,077)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039435)
HIX0224320
HIT000689467_02 (
ENST00000577514
)
(Pleckstrin homology domain containing protein.)
genome : 16,945,859 - 17,030,170 (84,312)
query : 1 - 516 (516/516)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224320)
HIX0224320
HIT000479172 (
ENST00000395807
)
(Pleckstrin homology domain containing protein.)
genome : 16,946,074 - 17,000,651 (54,578)
query : 1 - 926 (926/926)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 11, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224320)
HIX0224320
HIT000479171 (
ENST00000395806
)
(Conserved hypothetical protein.)
genome : 16,946,074 - 16,961,264 (15,191)
query : 1 - 527 (527/527)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224320)
HIX0224320
HIT000448847_04
(
DQ582316
)
Representative transcript
(Non-protein coding transcript.)
genome : 16,946,170 - 16,946,200 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224320)
HIX0039404
HIT000088979
(
BC016384
)
Representative transcript
(Conserved hypothetical protein.)
genome : 16,979,352 - 16,981,067 (1,716)
query : 4 - 1,062 (1,059/1,090)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 0.997
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039404)
HIX0174018
HIT000526301 (
ENST00000428367
)
(Conserved hypothetical protein.)
genome : 16,979,352 - 16,981,066 (1,715)
query : 1 - 1,058 (1,058/1,058)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 9, extr 5, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174018)
HIX0224320
HIT000439185_04
(
DQ572654
)
(Non-protein coding transcript.)
genome : 17,030,041 - 17,030,069 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224320)
HIX0013577
HIT000696798 (
ENST00000584936
)
(Conserved hypothetical protein.)
genome : 17,034,929 - 17,041,733 (6,805)
query : 1 - 492 (492/492)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000087421
(
BC009982
)
(Myosin phosphatase Rho-interacting protein isoform 1.)
genome : 17,034,980 - 17,088,871 (53,892)
query : 1 - 3,192 (3,192/3,210)
18 exons
identity = 0.997
5'(1.000;0.974;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 16.3333, cyto 3, cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000695943_02 (
ENST00000584067
)
(Pleckstrin homology domain containing protein.)
genome : 17,034,980 - 17,088,868 (53,889)
query : 1 - 3,195 (3,195/3,195)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15.6667, cyto 4.5, cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000017154
(
AK092287
)
Representative transcript
(Conserved hypothetical protein.)
genome : 17,039,562 - 17,088,870 (49,309)
query : 1 - 3,309 (3,309/3,309)
19 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;0.984;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 14.5, nucl 5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000265660
(
BC075847
)
(Pleckstrin homology domain containing protein.)
genome : 17,039,606 - 17,088,871 (49,266)
query : 1 - 3,266 (3,266/3,284)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 14.8333, cyto_golg 2.83333,
golg 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000570850 (
ENST00000466186
)
(Conserved hypothetical protein.)
genome : 17,039,652 - 17,041,522 (1,871)
query : 1 - 406 (406/406)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14.5, nucl 12, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0173765
HIT000441403_04
(
DQ574872
)
Representative transcript
(Non-protein coding transcript.)
genome : 17,041,231 - 17,041,260 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173765)
HIX0224797
HIT000690463 (
ENST00000578521
)
(Hypothetical short protein.)
genome : 17,044,809 - 17,045,626 (818)
query : 1 - 569 (569/569)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224797)
HIX0013577
HIT000338354
(
BC105987
)
(Conserved hypothetical protein.)
genome : 17,046,962 - 17,088,331 (41,370)
query : 1 - 2,113 (2,113/2,128)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0173762
HIT000440271_04
(
DQ573740
)
Representative transcript
(Non-protein coding transcript.)
genome : 17,049,366 - 17,049,396 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173762)
HIX0173742
HIT000436724_04
(
DQ570193
)
Representative transcript
(Non-protein coding transcript.)
genome : 17,050,657 - 17,050,687 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173742)
HIX0013577
HIT000008503
(
AK025229
)
(Conserved hypothetical protein.)
genome : 17,050,673 - 17,088,325 (37,653)
query : 1 - 1,988 (1,988/2,003)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;0.994;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000693854 (
ENST00000581955
)
(Conserved hypothetical protein.)
genome : 17,053,074 - 17,062,029 (8,956)
query : 1 - 868 (868/868)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 12, mito 7, cyto 3.5,
E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000691756 (
ENST00000579832
)
(Conserved hypothetical protein.)
genome : 17,057,666 - 17,088,549 (30,884)
query : 1 - 438 (438/438)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000464083_04
(
DQ597552
)
(Non-protein coding transcript.)
genome : 17,061,778 - 17,061,807 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000119765 (
ENST00000313485
)
(Conserved hypothetical protein.)
genome : 17,061,811 - 17,088,874 (27,064)
query : 1 - 6,050 (6,050/6,050)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 16.5, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000050750
(
BC021070
)
(Conserved hypothetical protein.)
genome : 17,062,274 - 17,088,871 (26,598)
query : 1 - 1,840 (1,840/1,857)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 14.5, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000090353
(
BC021058
)
(Conserved hypothetical protein.)
genome : 17,062,274 - 17,088,871 (26,598)
query : 1 - 1,840 (1,840/1,857)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 14.5, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000101116
(
D23673
)
(Myosin phosphatase Rho-interacting protein isoform 1.)
genome : 17,064,552 - 17,088,870 (24,319)
query : 14 - 1,745 (1,732/1,745)
9 exons
identity = 0.997
5'(1.000;0.980;1.000;1.000;1.000;1.000;1.000;
1.000;0.997)3'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000000581
(
AB020671
)
(Myosin phosphatase Rho-interacting protein isoform 1.)
genome : 17,067,974 - 17,088,870 (20,897)
query : 1 - 4,872 (4,872/4,872)
9 exons
identity = 1.000
5'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000008878
(
AK025604
)
(Myosin phosphatase Rho-interacting protein; Rho-interacting protein 3; RIP3; p116Rip;)
genome : 17,068,870 - 17,088,871 (20,002)
query : 1 - 4,039 (4,039/4,062)
10 exons
identity = 0.999
5'(0.999;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 16, cyto 9.5, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000512197 (
ENST00000414263
)
(Conserved hypothetical protein.)
genome : 17,068,870 - 17,088,874 (20,005)
query : 1 - 4,043 (4,043/4,043)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000334061
(
BC050323
)
(Myosin phosphatase Rho-interacting protein isoform 1.)
genome : 17,069,115 - 17,088,871 (19,757)
query : 1 - 3,732 (3,732/3,747)
9 exons
identity = 0.997
5'(0.998;0.993;1.000;1.000;1.000;1.000;0.988;
1.000;0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 17.5, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0212381
HIT000009521
(
AK026247
)
Representative transcript
(Conserved hypothetical protein.)
genome : 17,071,260 - 17,088,871 (17,612)
query : 19 - 1,252 (1,234/1,252)
2 exons
identity = 0.998
3'(0.998;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 8, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212381)
HIX0212381
HIT000696075 (
ENST00000584203
)
(Conserved hypothetical protein.)
genome : 17,071,260 - 17,088,868 (17,609)
query : 1 - 1,231 (1,231/1,231)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 8, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212381)
HIX0013577
HIT000690490 (
ENST00000578548
)
(Conserved hypothetical protein.)
genome : 17,074,174 - 17,075,156 (983)
query : 1 - 756 (756/756)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 10.5, mito 9, cyto_nucl 6.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000527118 (
ENST00000429184
)
(Conserved hypothetical protein.)
genome : 17,075,034 - 17,088,290 (13,257)
query : 1 - 914 (914/914)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 13.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000693755 (
ENST00000581855
)
(Conserved hypothetical protein.)
genome : 17,076,035 - 17,080,710 (4,676)
query : 1 - 329 (329/329)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 4, golg 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000409797
(
AB362572
)
(Conserved hypothetical protein.)
genome : 17,077,230 - 17,088,157 (10,928)
query : 19 - 598 (580/598)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.970
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, cyto 13, nucl 11, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000409798
(
AB362573
)
(Conserved hypothetical protein.)
genome : 17,077,230 - 17,088,157 (10,928)
query : 19 - 535 (517/535)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.966
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, cyto 10.5, nucl 9.5, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000249429
(
AJ844625
)
(Conserved hypothetical protein.)
genome : 17,077,338 - 17,079,822 (2,485)
query : 1 - 255 (255/255)
3 exons
identity = 0.996
5'(0.981;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 13.5, nucl 11.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000690155 (
ENST00000578209
)
(Conserved hypothetical protein.)
genome : 17,078,678 - 17,120,993 (42,316)
query : 1 - 751 (751/751)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12, mito 6, extr 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000087849
(
BC012426
)
(Conserved hypothetical protein.)
genome : 17,078,680 - 17,088,871 (10,192)
query : 1 - 1,118 (1,118/1,133)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13.5, nucl 10.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000566889 (
ENST00000462033
)
(Conserved hypothetical protein.)
genome : 17,080,566 - 17,083,464 (2,899)
query : 1 - 309 (309/309)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 8, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000092101
(
BC030255
)
(Conserved hypothetical protein.)
genome : 17,080,657 - 17,088,871 (8,215)
query : 11 - 901 (891/932)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 0.989
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0013577
HIT000691290_02 (
ENST00000579361
)
(Hypothetical protein.)
genome : 17,083,316 - 17,088,874 (5,559)
query : 20 - 844 (825/844)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.977
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 7, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0224092
HIT000004868
(
AK021594
)
(Hypothetical protein.)
genome : 17,084,818 - 17,105,299 (20,482)
query : 1 - 1,793 (1,793/1,793)
2 exons
identity = 0.994
3'(0.997;0.896)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 12, cyto_nucl 11, cyto_pero 8.5,
nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224092)
HIX0173743
HIT000436941_05
(
DQ570410
)
Representative transcript
(Non-protein coding transcript.)
genome : 17,088,402 - 17,088,431 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173743)
HIX0173764
HIT000440866_04
(
DQ574335
)
Representative transcript
(Non-protein coding transcript.)
genome : 17,088,544 - 17,088,574 (31)
query : 1 - 31 (31/31)
1 exon
identity = 0.968
3'(0.968)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173764)
HIX0013579
HIT000693888 (
ENST00000581989
)
(Conserved hypothetical protein.)
genome : 17,089,779 - 17,092,814 (3,036)
query : 1 - 444 (444/444)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 10.3333, cyto 9, nucl 6.5,
cyto_pero 5.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013579)
HIX0013579
HIT000680283 (
ENST00000567268
)
(Conserved hypothetical protein.)
genome : 17,091,982 - 17,095,962 (3,981)
query : 1 - 3,981 (3,981/3,981)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 10.3333, cyto 9, nucl 6.5,
cyto_pero 5.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013579)
HIX0013579
HIT000016204
(
AK091337
)
Representative transcript
(Hypothetical short protein.)
genome : 17,093,701 - 17,095,957 (2,257)
query : 2 - 2,258 (2,257/2,258)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013579)
HIX0013579
HIT000009309
(
AK026035
)
(Hypothetical short protein.)
genome : 17,094,548 - 17,095,960 (1,413)
query : 2 - 1,415 (1,414/1,432)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013579)
HIX0224092
HIT000318201 (
NM_178836
)
(Phospholipase D-like domain containing protein.)
genome : 17,104,310 - 17,109,646 (5,337)
query : 1 - 2,576 (2,576/2,591)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.4
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, pero 4, cyto 2, mito_pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224092)
HIX0224092
HIT000041267
(
BC031263
)
(Conserved hypothetical protein.)
genome : 17,104,310 - 17,109,632 (5,323)
query : 1 - 2,562 (2,562/2,577)
2 exons
identity = 0.996
3'(0.997;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 10.5, cyto 7.5, extr 6, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224092)
HIX0224092
HIT000122824 (
ENST00000321560
)
(Phospholipase D-like domain containing protein.)
genome : 17,104,309 - 17,109,629 (5,321)
query : 1 - 2,560 (2,560/2,560)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, pero 4, cyto 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224092)
HIX0224092
HIT000015766
(
AK090899
)
Representative transcript
(Mitochondrial cardiolipin hydrolase; EC=3.1.-.-; Choline phosphatase 6; Mitochondrial phospholipase; MitoPLD; Phosphatidylcholine-hydrolyzing phospholipase D6; Phospholipase D6; PLD 6; Protein zucchini homolog;)
genome : 17,104,311 - 17,109,623 (5,313)
query : 1 - 2,552 (2,552/2,552)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
EC number :
EC 3.1.-.-
InterPro :
IPR001736 : Phospholipase D/Transphosphatidylase
IPR025202 : Phospholipase D-like domain
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, pero 4, cyto 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224092)
HIX0013577
HIT000023249
(
AK098419
)
(Conserved hypothetical protein.)
genome : 17,104,311 - 17,106,004 (1,694)
query : 1 - 1,693 (1,693/1,693)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, extr 6, cyto 5.5, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013577)
HIX0224092
HIT000489906
(
AK295282
)
(Mitochondrial cardiolipin hydrolase.)
genome : 17,105,775 - 17,109,646 (3,872)
query : 1 - 1,031 (1,031/1,031)
3 exons
identity = 0.997
3'(1.000;1.000;0.965)5'
coverage = 1.000
EC number :
EC 3.1.4.4
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
InterPro :
IPR001736 : Phospholipase D/Transphosphatidylase
IPR025202 : Phospholipase D-like domain
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, nucl 8, E.R._mito 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224092)
HIX0202417
HIT000213015 (
NM_144997
)
(Folliculin; BHD skin lesion fibrofolliculoma protein; Birt-Hogg-Dube syndrome protein;)
genome : 17,115,528 - 17,140,502 (24,975)
query : 1 - 3,685 (3,685/3,723)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.986;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 13, cyto 6, extr 2, mito 2, lyso 2,
golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202417)
HIX0202417
HIT000081124
(
AF517523
)
Representative transcript
(Folliculin; BHD skin lesion fibrofolliculoma protein; Birt-Hogg-Dube syndrome protein;)
genome : 17,115,528 - 17,140,453 (24,926)
query : 1 - 3,636 (3,636/3,674)
14 exons
identity = 0.998
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.986;1.000;1.000;0.996)5'
coverage = 1.000
InterPro :
IPR021713 : Folliculin
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 13, cyto 6, extr 2, mito 2, lyso 2,
golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202417)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK154040
Rattus
sp. (Rat) : BC085848
Bos
sp. (Cow) : BC107555
Danio
sp. (Zebrafish) : BC115356
Canis
sp. (Dog) : EF632108
Equus
sp. (Horse) : ENSECAT00000022531
Oryzias
sp. (Medaka) : ENSORLT00000014182
Pongo
sp. (Orangutan) : ENSPPYT00000009395
Pan
sp. (Chimpanzee) : ENSPTRT00000016261
Tetraodon
sp. (Tetraodon) : GSTENT00015407001
Takifugu
sp. (Fugu) : SINFRUT00000129203
Macaca
sp. (Macaque) : XM_001088928
Monodelphis
sp. (Opossum) : XM_001362097
HIX0202417
HIT000112568 (
ENST00000285071
)
(Folliculin; BHD skin lesion fibrofolliculoma protein; Birt-Hogg-Dube syndrome protein;)
genome : 17,115,526 - 17,140,453 (24,928)
query : 1 - 3,638 (3,638/3,638)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.986;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 13, cyto 6, extr 2, mito 2, lyso 2,
golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202417)
HIX0202417
HIT000037274
(
BC015725
)
(Folliculin; BHD skin lesion fibrofolliculoma protein; Birt-Hogg-Dube syndrome protein;)
genome : 17,116,084 - 17,124,925 (8,842)
query : 1 - 1,829 (1,829/1,915)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.971
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13, cyto 11, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202417)
HIX0202417
HIT000689541 (
ENST00000577591
)
(Conserved hypothetical protein.)
genome : 17,120,286 - 17,122,417 (2,132)
query : 1 - 296 (296/296)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 7.5, extr_plas 7.5, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202417)
HIX0202417
HIT000026797
(
AL831885
)
(Folliculin;)
genome : 17,122,897 - 17,126,436 (3,540)
query : 1 - 2,668 (2,668/2,684)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.999
InterPro :
IPR021713 : Folliculin
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 3, cyto_nucl 2, nucl 1.5, cyto 1.5,
E.R._mito 1.5, mito_pero 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202417)
HIX0202417
HIT000570975 (
ENST00000466317
)
(Folliculin;)
genome : 17,122,901 - 17,126,436 (3,536)
query : 1 - 2,664 (2,664/2,684)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 3, cyto_nucl 2, nucl 1.5, cyto 1.5,
E.R._mito 1.5, mito_pero 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202417)
HIX0202417
HIT000212844 (
NM_144606
)
(Folliculin; BHD skin lesion fibrofolliculoma protein; Birt-Hogg-Dube syndrome protein;)
genome : 17,124,485 - 17,140,502 (16,018)
query : 1 - 1,741 (1,741/1,760)
8 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.986;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, extr 11, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202417)
HIX0202417
HIT000037257
(
BC015687
)
(Folliculin; BHD skin lesion fibrofolliculoma protein; Birt-Hogg-Dube syndrome protein;)
genome : 17,124,485 - 17,140,453 (15,969)
query : 1 - 1,692 (1,692/1,711)
8 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;0.986;1.000;1.000;
0.996)5'
coverage = 1.000
InterPro :
IPR021713 : Folliculin
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, extr 11, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202417)
HIX0202417
HIT000396079 (
ENST00000389169
)
(Folliculin; BHD skin lesion fibrofolliculoma protein; Birt-Hogg-Dube syndrome protein;)
genome : 17,124,485 - 17,140,453 (15,969)
query : 1 - 1,692 (1,692/1,692)
8 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.986;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, extr 11, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202417)
HIX0202417
HIT000584339 (
ENST00000480316
)
(Folliculin; BHD skin lesion fibrofolliculoma protein; Birt-Hogg-Dube syndrome protein;)
genome : 17,124,902 - 17,127,819 (2,918)
query : 1 - 786 (786/786)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, extr 11, cyto_nucl 11, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202417)
HIX0202417
HIT000514998 (
ENST00000417064
)
(Folliculin; BHD skin lesion fibrofolliculoma protein; Birt-Hogg-Dube syndrome protein;)
genome : 17,127,236 - 17,140,496 (13,261)
query : 1 - 757 (757/757)
4 exons
identity = 0.995
3'(1.000;1.000;0.967;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 11.5, cyto 11, extr 9, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202417)
HIX0202417
HIT000047785
(
AK127912
)
(Folliculin; BHD skin lesion fibrofolliculoma protein; Birt-Hogg-Dube syndrome protein;)
genome : 17,127,867 - 17,140,502 (12,636)
query : 1 - 2,523 (2,523/2,523)
5 exons
identity = 0.996
3'(0.998;0.986;1.000;1.000;0.993)5'
coverage = 1.000
InterPro :
IPR021713 : Folliculin
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202417)
HIX0202417
HIT000396081 (
ENST00000389171
)
(Folliculin; BHD skin lesion fibrofolliculoma protein; Birt-Hogg-Dube syndrome protein;)
genome : 17,127,867 - 17,140,502 (12,636)
query : 1 - 2,523 (2,523/2,523)
5 exons
identity = 0.998
3'(1.000;0.986;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202417)
HIX0202417
HIT000046824
(
AK126951
)
(Folliculin; BHD skin lesion fibrofolliculoma protein; Birt-Hogg-Dube syndrome protein;)
genome : 17,127,867 - 17,132,791 (4,925)
query : 2 - 3,360 (3,359/3,360)
2 exons
identity = 0.997
3'(0.998;0.997)5'
coverage = 1.000
InterPro :
IPR021713 : Folliculin
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202417)
HIX0202417
HIT000396078 (
ENST00000389168
)
(Folliculin; BHD skin lesion fibrofolliculoma protein; Birt-Hogg-Dube syndrome protein;)
genome : 17,127,867 - 17,132,791 (4,925)
query : 1 - 3,359 (3,359/3,359)
2 exons
identity = 0.999
3'(1.000;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202417)
HIX0202417
HIT000566572 (
ENST00000461699
)
(Non-protein coding transcript.)
genome : 17,131,340 - 17,132,043 (704)
query : 1 - 243 (243/243)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202417)
HIX0202417
HIT000578168 (
ENST00000473853
)
(Hypothetical short protein.)
genome : 17,134,838 - 17,136,126 (1,289)
query : 1 - 384 (384/384)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202417)
HIX0013582
HIT000032200
(
BC005072
)
Representative transcript
(Conserved hypothetical protein.)
genome : 17,137,543 - 17,139,432 (1,890)
query : 1 - 718 (718/740)
2 exons
identity = 0.997
3'(1.000;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, nucl 10, extr 9, cyto 8, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013582)
HIX0013582
HIT000696814 (
ENST00000584952
)
(Conserved hypothetical protein.)
genome : 17,138,747 - 17,139,432 (686)
query : 1 - 686 (686/686)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, nucl 10, extr 9, cyto 8, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013582)
HIX0194949
HIT000521717 (
ENST00000423783
)
(Actin family protein.)
genome : 17,145,324 - 17,146,200 (877)
query : 1 - 877 (877/877)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, cyto 8.5, cyto_nucl 6.5, nucl 3.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194949)
HIX0194949
pHIT000116655 ( pHIT000116655 )
Representative transcript
(Conserved hypothetical protein.)
genome : 17,145,340 - 17,146,163 (824)
query : 1 - 762 (762/762)
3 exons
InterPro :
IPR004000 : Actin family
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194949)
CAGE tag :
T17R01054FE1
Ortholog candidate ( ->
Evola
)
Tetraodon
sp. (Tetraodon) : CR734615
Pan
sp. (Chimpanzee) : XR_020992
HIX0194949
pHIT000028672 ( pHIT000028672 )
(Conserved hypothetical protein.)
genome : 17,145,340 - 17,145,933 (594)
query : 1 - 594 (594/594)
1 exon
InterPro :
IPR004000 : Actin family
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194949)
CAGE tag :
H21BA98P1507
HIX0194949
HIT000689343 (
ENST00000577389
)
(Non-protein coding transcript.)
genome : 17,145,878 - 17,145,961 (84)
query : 1 - 84 (84/84)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194949)
HIX0224336
HIT000691640 (
ENST00000579716
)
(Conserved hypothetical protein.)
genome : 17,150,149 - 17,152,341 (2,193)
query : 1 - 419 (419/419)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12, extr 6, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224336)
HIX0224336
HIT000589807 (
ENST00000486032
)
(Conserved hypothetical protein.)
genome : 17,150,149 - 17,151,201 (1,053)
query : 1 - 725 (725/725)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 13.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224336)
HIX0224336
HIT000567906 (
ENST00000463097
)
(Proteasome component (PCI) domain containing protein.)
genome : 17,152,263 - 17,158,369 (6,107)
query : 1 - 288 (288/288)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 4.5, nucl 3.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224336)
HIX0224336
HIT000575845 (
ENST00000471414
)
(Proteasome component (PCI) domain containing protein.)
genome : 17,158,201 - 17,164,010 (5,810)
query : 1 - 455 (455/455)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 10, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224336)
HIX0224336
HIT000590546 (
ENST00000486810
)
(Conserved hypothetical protein.)
genome : 17,163,616 - 17,179,380 (15,765)
query : 1 - 938 (938/938)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 10, mito 8, extr 4, E.R._mito 4,
mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224336)
HIX0224336
HIT000689165 (
ENST00000577210
)
(Conserved hypothetical protein.)
genome : 17,163,619 - 17,184,500 (20,882)
query : 1 - 752 (752/752)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224336)
HIX0224336
HIT000515286 (
ENST00000417352
)
(Conserved hypothetical protein.)
genome : 17,163,688 - 17,184,553 (20,866)
query : 1 - 1,009 (1,009/1,009)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 12, nucl 4, extr 3, mito 3, pero 3,
mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224336)
HIX0224336
HIT000696088 (
ENST00000584216
)
(Conserved hypothetical protein.)
genome : 17,163,712 - 17,184,587 (20,876)
query : 1 - 876 (876/876)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 13, nucl 12, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224336)
HIX0224336
HIT000695041 (
ENST00000583160
)
(Conserved hypothetical protein.)
genome : 17,165,280 - 17,174,290 (9,011)
query : 1 - 365 (365/365)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 10.8333, cyto_plas 8.66667,
mito 8, extr 4, nucl 4, E.R._mito 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224336)
HIX0224336
HIT000596146 (
ENST00000492672
)
(Conserved hypothetical protein.)
genome : 17,165,312 - 17,184,560 (19,249)
query : 1 - 809 (809/809)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13, extr 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224336)
HIX0224336
HIT000581452 (
ENST00000477299
)
(Conserved hypothetical protein.)
genome : 17,165,334 - 17,184,560 (19,227)
query : 1 - 656 (656/656)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 12.3333, extr 11,
cyto_pero 7.66667, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224336)
HIX0224336
HIT000689201 (
ENST00000577246
)
(Conserved hypothetical protein.)
genome : 17,165,360 - 17,184,587 (19,228)
query : 1 - 639 (639/639)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 13, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224336)
HIX0224336
HIT000599000 (
ENST00000495640
)
(Conserved hypothetical protein.)
genome : 17,168,174 - 17,174,121 (5,948)
query : 1 - 333 (333/333)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 6.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224336)
HIX0224336
HIT000567082 (
ENST00000462236
)
(Conserved hypothetical protein.)
genome : 17,168,248 - 17,184,474 (16,227)
query : 1 - 551 (551/551)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, cyto 9, cyto_nucl 8.16667, cyto_pero 7.16667,
nucl 5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224336)
HIX0224597
HIT000582482 (
ENST00000478373
)
(5'(3')-deoxyribonucleotidase family protein.)
genome : 17,206,680 - 17,248,180 (41,501)
query : 1 - 771 (771/771)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 7, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224597)
HIX0224599
HIT000584540 (
ENST00000480529
)
(Conserved hypothetical protein.)
genome : 17,248,583 - 17,250,466 (1,884)
query : 1 - 392 (392/392)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 10.5, cyto_nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224599)
HIX0194982
pHIT000028677 ( pHIT000028677 )
Representative transcript
(Hypothetical short protein.)
genome : 17,258,424 - 17,265,657 (7,234)
query : 1 - 117 (117/117)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194982)
CAGE tag :
H22BA40E1510
HIX0131742
HIT000680811_02 (
ENST00000567815
)
(60S ribosomal protein L13; Breast basic conserved protein 1;)
genome : 17,286,669 - 17,287,378 (710)
query : 1 - 696 (696/712)
1 exon
identity = 0.966
3'(0.966)5'
coverage = 0.978
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 6, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0131742)
HIX0131742
HIT000050235
(
AK130964
)
Representative transcript
(60S ribosomal protein L13; BBC1 protein homolog;)
genome : 17,286,669 - 17,287,377 (709)
query : 1 - 579 (579/587)
2 exons
identity = 0.978
3'(0.976;0.984)5'
coverage = 0.986
InterPro :
IPR001380 : Ribosomal protein L13e
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 7, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0131742)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : ENSMUST00000079761
Bos
sp. (Cow) : XM_001251851
Pan
sp. (Chimpanzee) : XR_021724
HIX0131742
HIT000476205 (
ENST00000392730
)
(60S ribosomal protein L13 isoform 2.)
genome : 17,286,691 - 17,287,326 (636)
query : 1 - 636 (636/636)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
EC number :
EC 3.6.5.3
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0131742)
HIX0131742
HIT000479807_03 (
ENST00000396469
)
(60S ribosomal protein L13 isoform 3.)
genome : 17,286,691 - 17,287,326 (636)
query : 1 - 495 (495/495)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.5.3
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 16, cyto 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0131742)
HIX0131742
HIT000676432_02 (
ENST00000563270
)
(60S ribosomal protein L13; Breast basic conserved protein 1;)
genome : 17,286,701 - 17,287,224 (524)
query : 31 - 554 (524/554)
1 exon
identity = 0.985
3'(0.985)5'
coverage = 0.946
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0131742)
HIX0194827
HIT000722908 (
NM_001243312
)
(PDZ domain containing protein.)
genome : 17,322,658 - 17,326,728 (4,071)
query : 1 - 543 (543/543)
3 exons
identity = 0.985
5'(0.944;0.906;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 8.5, cyto_nucl 8.5, nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194827)
HIX0194827
HIT000362658 (
ENST00000381380
)
(PDZ domain containing protein.)
genome : 17,325,995 - 17,327,018 (1,024)
query : 1 - 1,024 (1,024/1,024)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 11, cysk 8, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194827)
HIX0174000
HIT000521191 (
ENST00000423257
)
(tRNA-splicing endonuclease subunit Sen15 domain containing protein.)
genome : 17,359,741 - 17,360,573 (833)
query : 1 - 515 (515/515)
2 exons
identity = 0.996
5'(0.994;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 12, nucl 8.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174000)
HIX0013585
HIT000110332 (
ENST00000268711
)
(Mediator complex, subunit Med9 family protein.)
genome : 17,380,300 - 17,396,540 (16,241)
query : 1 - 2,228 (2,228/2,228)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 12.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013585)
HIX0013585
HIT000003529
(
AK001055
)
Representative transcript
(Conserved hypothetical protein.)
genome : 17,380,300 - 17,396,534 (16,235)
query : 1 - 2,222 (2,222/2,222)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 12.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013585)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK147123
Bos
sp. (Cow) : BC112843
Equus
sp. (Horse) : ENSECAT00000021866
Oryzias
sp. (Medaka) : ENSORLT00000010009
Pongo
sp. (Orangutan) : ENSPPYT00000009398
Takifugu
sp. (Fugu) : SINFRUT00000170354
Rattus
sp. (Rat) : XM_001077303
Macaca
sp. (Macaque) : XM_001090318
Pan
sp. (Chimpanzee) : XM_001159948
Monodelphis
sp. (Opossum) : XM_001363310
Gallus
sp. (Chicken) : XM_414810
Canis
sp. (Dog) : XM_846808
HIX0013585
HIT000206862 (
NM_018019
)
(Mediator complex, subunit Med9 family protein.)
genome : 17,380,300 - 17,396,534 (16,235)
query : 1 - 2,222 (2,222/2,222)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 12.5, extr 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013585)
HIX0013585
HIT000692377 (
ENST00000580462
)
(Conserved hypothetical protein.)
genome : 17,380,308 - 17,388,906 (8,599)
query : 1 - 565 (565/565)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 9.5, extr_plas 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013585)
HIX0013585
HIT000029803
(
BC000647
)
(Mediator complex, subunit Med9 family protein.)
genome : 17,380,311 - 17,396,535 (16,225)
query : 1 - 2,212 (2,212/2,239)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011425 : Mediator complex, subunit Med9
GO :
0001104 : Molecular Function : RNA polymerase II transcription cofactor activity
0006357 : Biological Process : regulation of transcription from RNA polymerase II promoter
0016592 : Cellular Component : mediator complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 12.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013585)
HIX0013585
HIT000035110
(
BC010906
)
(Conserved hypothetical protein.)
genome : 17,380,320 - 17,380,891 (572)
query : 3 - 574 (572/603)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 15, mito 6, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013585)
HIX0013585
HIT000696901 (
ENST00000585041
)
(Conserved hypothetical protein.)
genome : 17,380,320 - 17,380,998 (679)
query : 1 - 679 (679/679)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013585)
HIX0013585
HIT000338076
(
BC104988
)
(Mediator complex, subunit Med9 family protein.)
genome : 17,380,322 - 17,395,595 (15,274)
query : 1 - 1,261 (1,261/1,261)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011425 : Mediator complex, subunit Med9
GO :
0001104 : Molecular Function : RNA polymerase II transcription cofactor activity
0006357 : Biological Process : regulation of transcription from RNA polymerase II promoter
0016592 : Cellular Component : mediator complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 12.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013585)
HIX0013585
HIT000340158
(
BC112029
)
(Mediator complex, subunit Med9 family protein.)
genome : 17,380,322 - 17,395,595 (15,274)
query : 1 - 1,261 (1,261/1,261)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
InterPro :
IPR011425 : Mediator complex, subunit Med9
GO :
0001104 : Molecular Function : RNA polymerase II transcription cofactor activity
0006357 : Biological Process : regulation of transcription from RNA polymerase II promoter
0016592 : Cellular Component : mediator complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 12.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013585)
HIX0013585
HIT000693221 (
ENST00000581315
)
(Conserved hypothetical protein.)
genome : 17,380,339 - 17,394,785 (14,447)
query : 1 - 568 (568/568)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 9.5, extr_plas 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013585)
HIX0013585
HIT000046795
(
AK126922
)
(Conserved hypothetical protein.)
genome : 17,388,336 - 17,391,686 (3,351)
query : 1 - 3,354 (3,354/3,354)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013585)
HIX0224859
HIT000692223 (
ENST00000580307
)
(Conserved hypothetical protein.)
genome : 17,388,336 - 17,391,686 (3,351)
query : 1 - 3,351 (3,351/3,351)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 9, cyto 8.5, cyto_nucl 8.5, nucl 7.5, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224859)
HIX0013586
HIT000205853 (
NM_016084
)
(Dexamethasone-induced Ras-related protein 1; Activator of G-protein signaling 1; Precursor;)
genome : 17,397,754 - 17,399,709 (1,956)
query : 1 - 1,745 (1,745/1,814)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.5, nucl 11, extr 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013586)
HIX0013586
HIT000656746 (
NM_001199989
)
(Dexamethasone-induced Ras-related protein 1; Activator of G-protein signaling 1; Precursor;)
genome : 17,397,754 - 17,399,709 (1,956)
query : 1 - 1,671 (1,671/1,740)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 16, nucl 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013586)
HIX0013586
HIT000097324
(
BC042688
)
(Dexamethasone-induced Ras-related protein 1; Activator of G-protein signaling 1; Precursor;)
genome : 17,397,754 - 17,399,675 (1,922)
query : 1 - 1,711 (1,711/1,780)
2 exons
identity = 0.999
3'(0.998;1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
IPR020849 : Small GTPase superfamily, Ras type
GO :
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007264 : Biological Process : small GTPase mediated signal transduction
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.5, nucl 11, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013586)
HIX0013586
HIT000065654
(
AF069506
)
(Dexamethasone-induced Ras-related protein 1; Activator of G-protein signaling 1; Precursor;)
genome : 17,397,754 - 17,399,640 (1,887)
query : 1 - 1,676 (1,676/1,740)
2 exons
identity = 0.999
3'(0.998;1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
IPR020849 : Small GTPase superfamily, Ras type
GO :
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007264 : Biological Process : small GTPase mediated signal transduction
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.5, nucl 11, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013586)
HIX0013586
HIT000072705
(
AF177335
)
(Dexamethasone-induced Ras-related protein 1; Activator of G-protein signaling 1; Precursor;)
genome : 17,397,754 - 17,399,687 (1,934)
query : 1 - 1,725 (1,725/1,746)
2 exons
identity = 0.998
3'(0.998;0.998)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
IPR020849 : Small GTPase superfamily, Ras type
GO :
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007264 : Biological Process : small GTPase mediated signal transduction
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.5, nucl 11, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013586)
HIX0013586
HIT000038232
(
BC018041
)
Representative transcript
(Dexamethasone-induced Ras-related protein 1; Activator of G-protein signaling 1; Precursor;)
genome : 17,397,756 - 17,399,707 (1,952)
query : 1 - 1,741 (1,741/1,758)
2 exons
identity = 0.999
3'(0.998;1.000)5'
coverage = 0.999
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
IPR020849 : Small GTPase superfamily, Ras type
GO :
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007264 : Biological Process : small GTPase mediated signal transduction
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.5, nucl 11, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013586)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF009246
Rattus
sp. (Rat) : AF239157
Bos
sp. (Cow) : BC103301
Gallus
sp. (Chicken) : DQ516976
Monodelphis
sp. (Opossum) : ENSMODT00000005994
Oryzias
sp. (Medaka) : ENSORLT00000010018
Pongo
sp. (Orangutan) : ENSPPYT00000009399
Tetraodon
sp. (Tetraodon) : GSTENT00014224001
Takifugu
sp. (Fugu) : SINFRUT00000127698
Macaca
sp. (Macaque) : XM_001090082
Pan
sp. (Chimpanzee) : XM_523573
Canis
sp. (Dog) : XM_546661
HIX0013586
HIT000103915 (
ENST00000225688
)
(Dexamethasone-induced Ras-related protein 1; Activator of G-protein signaling 1; Precursor;)
genome : 17,397,751 - 17,399,707 (1,957)
query : 1 - 1,746 (1,746/1,746)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.5, nucl 11, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013586)
HIX0013586
HIT000488697
(
AK294073
)
(Dexamethasone-induced Ras-related protein 1; Activator of G-protein signaling 1; Precursor;)
genome : 17,398,021 - 17,399,709 (1,689)
query : 1 - 1,404 (1,404/1,404)
2 exons
identity = 0.999
3'(0.999;0.998)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR020849 : Small GTPase superfamily, Ras type
GO :
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007264 : Biological Process : small GTPase mediated signal transduction
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 16, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013586)
HIX0013586
HIT000691085 (
ENST00000579152
)
(Dexamethasone-induced Ras-related protein 1; Activator of G-protein signaling 1; Precursor;)
genome : 17,398,021 - 17,399,709 (1,689)
query : 1 - 1,404 (1,404/1,404)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 16, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013586)
HIX0013586
HIT000071843
(
AF153192
)
(Dexamethasone-induced Ras-related protein 1; Activator of G-protein signaling 1; Precursor;)
genome : 17,398,097 - 17,399,495 (1,399)
query : 1 - 1,187 (1,187/1,187)
2 exons
identity = 0.990
3'(0.988;0.997)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
IPR020849 : Small GTPase superfamily, Ras type
GO :
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007264 : Biological Process : small GTPase mediated signal transduction
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.5, nucl 11, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013586)
HIX0013586
HIT000072437
(
AF172846
)
(Dexamethasone-induced Ras-related protein 1; Activator of G-protein signaling 1; Precursor;)
genome : 17,398,372 - 17,399,559 (1,188)
query : 1 - 979 (979/979)
2 exons
identity = 0.995
3'(0.994;0.997)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
IPR020849 : Small GTPase superfamily, Ras type
GO :
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007264 : Biological Process : small GTPase mediated signal transduction
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.5, nucl 11, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013586)
HIX0013586
HIT000431662
(
AK312796
)
(Dexamethasone-induced Ras-related protein 1; Activator of G-protein signaling 1; Precursor;)
genome : 17,398,439 - 17,399,709 (1,271)
query : 1 - 1,060 (1,060/1,060)
2 exons
identity = 0.999
3'(1.000;0.998)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
IPR020849 : Small GTPase superfamily, Ras type
GO :
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007264 : Biological Process : small GTPase mediated signal transduction
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.5, nucl 11, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013586)
HIX0013586
HIT000080860
(
AF498923
)
(Dexamethasone-induced Ras-related protein 1; Activator of G-protein signaling 1; Precursor;)
genome : 17,398,439 - 17,399,495 (1,057)
query : 1 - 846 (846/846)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
IPR020849 : Small GTPase superfamily, Ras type
GO :
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007264 : Biological Process : small GTPase mediated signal transduction
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.5, nucl 11, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013586)
HIX0013587
HIT000029733
(
BC000557
)
(Phosphatidylethanolamine N-methyltransferase; PEAMT; PEMT; EC=2.1.1.17; EC=2.1.1.71; PEMT2;)
genome : 17,408,878 - 17,494,993 (86,116)
query : 1 - 991 (991/1,027)
7 exons
identity = 0.998
3'(1.000;0.987;1.000;1.000;0.991;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.17
,
EC 2.1.1.71
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
InterPro :
IPR007318 : Phospholipid methyltransferase
IPR024960 : Phosphatidyl-N-methylethanolamine/N-methyltransferase
GO :
0006644 : Biological Process : phospholipid metabolic process
0008170 : Molecular Function : N-methyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0013587
HIT000053507
(
BC050593
)
Representative transcript
(Phosphatidylethanolamine N-methyltransferase; PEAMT; PEMT; EC=2.1.1.17; EC=2.1.1.71; PEMT2;)
genome : 17,408,878 - 17,494,994 (86,117)
query : 1 - 992 (992/1,007)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.991;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.17
,
EC 2.1.1.71
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
InterPro :
IPR007318 : Phospholipid methyltransferase
IPR024960 : Phosphatidyl-N-methylethanolamine/N-methyltransferase
GO :
0006644 : Biological Process : phospholipid metabolic process
0008170 : Molecular Function : N-methyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AF465983
Gallus
sp. (Chicken) : AJ720523
Mus
sp. (Mouse) : AK133744
Bos
sp. (Cow) : BC105466
Tetraodon
sp. (Tetraodon) : CR696513
Equus
sp. (Horse) : ENSECAT00000021845
Monodelphis
sp. (Opossum) : ENSMODT00000006008
Pongo
sp. (Orangutan) : ENSPPYT00000009400
Takifugu
sp. (Fugu) : SINFRUT00000159627
Pan
sp. (Chimpanzee) : XM_001159575
Canis
sp. (Dog) : XM_536665
HIX0013587
HIT000213435 (
NM_148172
)
(Phosphatidylethanolamine N-methyltransferase; PEAMT; PEMT; EC=2.1.1.17; EC=2.1.1.71; PEMT2;)
genome : 17,408,878 - 17,495,017 (86,140)
query : 1 - 1,015 (1,015/1,026)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.17
,
EC 2.1.1.71
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0013587
HIT000724523 (
NM_001267551
)
(Phosphatidylethanolamine N-methyltransferase; PEAMT; PEMT; EC=2.1.1.17; EC=2.1.1.71; PEMT2;)
genome : 17,408,878 - 17,495,017 (86,140)
query : 1 - 949 (949/960)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.17
,
EC 2.1.1.71
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, E.R._mito 4, mito 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0013587
HIT000724524 (
NM_001267552
)
(Phosphatidylethanolamine N-methyltransferase isoform 3.)
genome : 17,408,878 - 17,495,017 (86,140)
query : 1 - 1,046 (1,046/1,057)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.17
,
EC 2.1.1.71
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 7.5, plas 6, pero 5, mito 4,
nucl 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0013587
HIT000072674
(
AF176806
)
(Phosphatidylethanolamine N-methyltransferase; PEAMT; PEMT; EC=2.1.1.17; EC=2.1.1.71; PEMT2;)
genome : 17,408,878 - 17,485,692 (76,815)
query : 4 - 959 (956/970)
7 exons
identity = 0.994
3'(0.986;0.987;0.991;1.000;1.000;1.000;1.000)5'
coverage = 0.997
EC number :
EC 2.1.1.17
,
EC 2.1.1.71
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
InterPro :
IPR007318 : Phospholipid methyltransferase
IPR024960 : Phosphatidyl-N-methylethanolamine/N-methyltransferase
GO :
0006644 : Biological Process : phospholipid metabolic process
0008170 : Molecular Function : N-methyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, E.R._mito 2.5, E.R. 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0013587
HIT000072675
(
AF176807
)
(Phosphatidylethanolamine N-methyltransferase; PEAMT; PEMT; EC=2.1.1.17; EC=2.1.1.71; PEMT2;)
genome : 17,408,878 - 17,480,779 (71,902)
query : 9 - 904 (896/915)
7 exons
identity = 0.993
3'(0.986;0.987;0.991;1.000;1.000;1.000;1.000)5'
coverage = 0.991
EC number :
EC 2.1.1.17
,
EC 2.1.1.71
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
InterPro :
IPR007318 : Phospholipid methyltransferase
IPR024960 : Phosphatidyl-N-methylethanolamine/N-methyltransferase
GO :
0006644 : Biological Process : phospholipid metabolic process
0008170 : Molecular Function : N-methyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, E.R._mito 2.5, E.R. 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0013587
HIT000213436 (
NM_148173
)
(Phosphatidylethanolamine N-methyltransferase; PEAMT; PEMT; EC=2.1.1.17; EC=2.1.1.71; PEMT2;)
genome : 17,408,878 - 17,480,779 (71,902)
query : 1 - 894 (894/905)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.17
,
EC 2.1.1.71
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, lyso 2, E.R._mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0013587
HIT000001907
(
AF113126
)
(Phosphatidylethanolamine N-methyltransferase; PEAMT; PEMT; EC=2.1.1.17; EC=2.1.1.71; PEMT2;)
genome : 17,408,878 - 17,494,986 (86,109)
query : 1 - 982 (982/991)
7 exons
identity = 0.994
3'(0.979;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.17
,
EC 2.1.1.71
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0013587
HIT000106799 (
ENST00000255389
)
(Phosphatidylethanolamine N-methyltransferase; PEAMT; PEMT; EC=2.1.1.17; EC=2.1.1.71; PEMT2;)
genome : 17,408,877 - 17,495,014 (86,138)
query : 1 - 1,013 (1,013/1,013)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.17
,
EC 2.1.1.71
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0013587
HIT000533274 (
ENST00000435340
)
(Phosphatidylethanolamine N-methyltransferase isoform 4.)
genome : 17,408,877 - 17,494,993 (86,117)
query : 1 - 960 (960/960)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.17
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 7.5, cyto 7, mito_pero 6.16667, plas 5.5,
extr_plas 5.5, extr 4.5, cyto_nucl 4.5, E.R._mito 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0013587
HIT000203683 (
NM_007169
)
(Phosphatidylethanolamine N-methyltransferase; PEAMT; PEMT; EC=2.1.1.17; EC=2.1.1.71; PEMT2;)
genome : 17,408,877 - 17,485,745 (76,869)
query : 1 - 1,008 (1,008/1,008)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.17
,
EC 2.1.1.71
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, lyso 2, E.R._mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0013587
HIT000479148 (
ENST00000395783
)
(Phosphatidylethanolamine N-methyltransferase; PEAMT; PEMT; EC=2.1.1.17; EC=2.1.1.71; PEMT2;)
genome : 17,408,877 - 17,485,745 (76,869)
query : 1 - 1,008 (1,008/1,008)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.17
,
EC 2.1.1.71
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, lyso 2, E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0013587
HIT000479147 (
ENST00000395782
)
(Phosphatidylethanolamine N-methyltransferase; PEAMT; PEMT; EC=2.1.1.17; EC=2.1.1.71; PEMT2;)
genome : 17,408,877 - 17,480,779 (71,903)
query : 1 - 895 (895/895)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.17
,
EC 2.1.1.71
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, lyso 2, E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0013587
HIT000593953 (
ENST00000490392
)
(Phosphatidylethanolamine N-methyltransferase; PEAMT; PEMT; EC=2.1.1.17; EC=2.1.1.71; PEMT2;)
genome : 17,408,877 - 17,422,394 (13,518)
query : 1 - 673 (673/673)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.17
,
EC 2.1.1.71
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, extr 7, E.R. 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0013587
HIT000588668 (
ENST00000484838
)
(Phosphatidylethanolamine N-methyltransferase; PEAMT; PEMT; EC=2.1.1.17; EC=2.1.1.71; PEMT2;)
genome : 17,408,877 - 17,421,471 (12,595)
query : 1 - 803 (803/803)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.17
,
EC 2.1.1.71
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0013587
HIT000694162 (
ENST00000582268
)
(Phosphatidylethanolamine N-methyltransferase; PEAMT; PEMT; EC=2.1.1.17; EC=2.1.1.71; PEMT2;)
genome : 17,408,877 - 17,409,637 (761)
query : 1 - 383 (383/383)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.17
,
EC 2.1.1.71
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 9, nucl 7.5, cyto 7.5,
extr_plas 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0013587
HIT000058971
(
AB029821
)
(Phosphatidylethanolamine N-methyltransferase; PEAMT; PEMT; EC=2.1.1.17; EC=2.1.1.71; PEMT2;)
genome : 17,408,878 - 17,485,745 (76,868)
query : 1 - 1,007 (1,007/1,007)
7 exons
identity = 0.998
3'(1.000;0.987;1.000;1.000;0.991;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.17
,
EC 2.1.1.71
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
InterPro :
IPR007318 : Phospholipid methyltransferase
IPR024960 : Phosphatidyl-N-methylethanolamine/N-methyltransferase
GO :
0006644 : Biological Process : phospholipid metabolic process
0008170 : Molecular Function : N-methyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, lyso 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0013587
HIT000479146 (
ENST00000395781
)
(Phosphatidylethanolamine N-methyltransferase isoform 3.)
genome : 17,408,879 - 17,495,022 (86,144)
query : 1 - 1,050 (1,050/1,050)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.17
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 7.5, plas 6, pero 5, mito 4,
nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0013587
HIT000496875
(
AK302251
)
(Phosphatidylethanolamine N-methyltransferase isoform 1.)
genome : 17,408,879 - 17,495,022 (86,144)
query : 1 - 1,050 (1,050/1,050)
8 exons
identity = 0.997
3'(1.000;0.987;1.000;1.000;1.000;0.983;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.17
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
InterPro :
IPR007318 : Phospholipid methyltransferase
IPR024960 : Phosphatidyl-N-methylethanolamine/N-methyltransferase
GO :
0006644 : Biological Process : phospholipid metabolic process
0008170 : Molecular Function : N-methyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 8.5, plas 6, nucl 4.5, mito 4,
pero 4, mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0013587
HIT000242579
(
AF044214
)
(Phosphatidylethanolamine N-methyltransferase isoform 1.)
genome : 17,408,879 - 17,494,982 (86,104)
query : 1 - 978 (978/978)
7 exons
identity = 0.987
3'(0.972;0.960;1.000;1.000;1.000;1.000;0.986)5'
coverage = 1.000
EC number :
EC 2.1.1.17
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
InterPro :
IPR007318 : Phospholipid methyltransferase
IPR024960 : Phosphatidyl-N-methylethanolamine/N-methyltransferase
GO :
0006644 : Biological Process : phospholipid metabolic process
0008170 : Molecular Function : N-methyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0013587
HIT000581736 (
ENST00000477595
)
(Phosphatidylethanolamine N-methyltransferase; PEAMT; PEMT; EC=2.1.1.17; EC=2.1.1.71;)
genome : 17,408,880 - 17,410,370 (1,491)
query : 1 - 430 (430/430)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.17
,
EC 2.1.1.71
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0013587
HIT000692067 (
ENST00000580147
)
(Phosphatidylethanolamine N-methyltransferase; PEAMT; PEMT; EC=2.1.1.17; EC=2.1.1.71; PEMT2;)
genome : 17,408,903 - 17,494,997 (86,095)
query : 1 - 708 (708/708)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.17
,
EC 2.1.1.71
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.3333, extr 11, cyto 11, nucl 8.5,
cyto_pero 6.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0013587
HIT000267949
(
CR457099
)
(Phosphatidylethanolamine N-methyltransferase; PEAMT; PEMT; EC=2.1.1.17; EC=2.1.1.71; PEMT2;)
genome : 17,409,109 - 17,480,326 (71,218)
query : 1 - 596 (596/600)
6 exons
identity = 0.997
3'(1.000;0.987;1.000;1.000;0.991;1.000)5'
coverage = 0.993
EC number :
EC 2.1.1.17
,
EC 2.1.1.71
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
InterPro :
IPR007318 : Phospholipid methyltransferase
IPR024960 : Phosphatidyl-N-methylethanolamine/N-methyltransferase
GO :
0006644 : Biological Process : phospholipid metabolic process
0008170 : Molecular Function : N-methyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, lyso 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0013587
HIT000391152
(
BC134420
)
(Phosphatidylethanolamine N-methyltransferase isoform 3.)
genome : 17,409,593 - 17,480,279 (70,687)
query : 14 - 456 (443/466)
5 exons
identity = 0.995
3'(1.000;1.000;1.000;0.991;0.978)5'
coverage = 0.951
EC number :
EC 2.1.1.17
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
InterPro :
IPR007318 : Phospholipid methyltransferase
IPR024960 : Phosphatidyl-N-methylethanolamine/N-methyltransferase
GO :
0006644 : Biological Process : phospholipid metabolic process
0008170 : Molecular Function : N-methyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18, plas 5, extr 4, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0224917
HIT000694219 (
ENST00000582325
)
(Conserved hypothetical protein.)
genome : 17,410,665 - 17,411,622 (958)
query : 1 - 795 (795/795)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 12, extr 11, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224917)
HIX0013587
HIT000519030 (
ENST00000421096
)
(Phosphatidylethanolamine N-methyltransferase isoform 1.)
genome : 17,412,098 - 17,494,964 (82,867)
query : 1 - 662 (662/662)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.17
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 9.5, plas 6, mito 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0013587
HIT000576820 (
ENST00000472446
)
(Phosphatidylethanolamine N-methyltransferase isoform 3.)
genome : 17,412,748 - 17,495,017 (82,270)
query : 1 - 473 (473/473)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.17
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0013587
HIT000566291 (
ENST00000461404
)
(Phosphatidylethanolamine N-methyltransferase; PEAMT; PEMT; EC=2.1.1.17; EC=2.1.1.71; PEMT2;)
genome : 17,415,828 - 17,495,014 (79,187)
query : 1 - 591 (591/591)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.17
,
EC 2.1.1.71
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, cyto 8.5, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013587)
HIX0019285
HIT000009949
(
AK026675
)
Representative transcript
(Conserved hypothetical protein.)
genome : 17,447,612 - 17,449,725 (2,114)
query : 1 - 2,114 (2,114/2,145)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 8.5, cyto 6.5, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019285)
HIX0039393
HIT000086847
(
BC007572
)
Representative transcript
(Conserved hypothetical protein.)
genome : 17,452,348 - 17,454,556 (2,209)
query : 1 - 2,209 (2,209/2,226)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto_nucl 7, cyto 6.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039393)
HIX0224966
HIT000695542 (
ENST00000583662
)
(Non-protein coding transcript.)
genome : 17,494,742 - 17,513,799 (19,058)
query : 1 - 425 (425/425)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224966)
HIX0224594
HIT000554024 (
ENST00000456090
)
(Conserved hypothetical protein.)
genome : 17,577,340 - 17,581,002 (3,663)
query : 1 - 564 (564/564)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 6.5, mito 6, cyto_nucl 5.66667,
cyto_pero 4.83333, mito_nucl 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224594)
HIX0013588
HIT000209896 (
NM_030665
)
(Retinoic acid-induced protein 1;)
genome : 17,584,787 - 17,714,764 (129,978)
query : 1 - 7,659 (7,659/7,668)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 16, cyto 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013588)
HIX0013588
HIT000250892
(
AY172136
)
(Retinoic acid-induced protein 1;)
genome : 17,584,787 - 17,714,767 (129,981)
query : 1 - 7,663 (7,663/7,663)
6 exons
identity = 0.999
5'(0.997;1.000;0.999;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001965 : Zinc finger, PHD-type
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 16, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013588)
HIX0013588
HIT000308389 (
ENST00000353383
)
(Retinoic acid-induced protein 1;)
genome : 17,584,787 - 17,714,767 (129,981)
query : 1 - 7,662 (7,662/7,662)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 16, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013588)
HIX0013588
HIT000001535
(
AB058723
)
(Retinoic acid-induced protein 1;)
genome : 17,584,787 - 17,714,717 (129,931)
query : 1 - 5,915 (5,915/5,915)
4 exons
identity = 0.999
5'(1.000;1.000;0.999;0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013588)
HIX0013588
HIT000593292 (
ENST00000489697
)
(Conserved hypothetical protein.)
genome : 17,585,043 - 17,588,364 (3,322)
query : 1 - 1,570 (1,570/1,570)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 11, nucl 9.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013588)
HIX0013588
HIT000575578 (
ENST00000471135
)
(Retinoic acid-induced protein 1;)
genome : 17,585,809 - 17,696,457 (110,649)
query : 1 - 570 (570/570)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 13, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013588)
HIX0039320
HIT000071432
(
AF147359
)
Representative transcript
(Conserved hypothetical protein.)
genome : 17,608,235 - 17,608,860 (626)
query : 1 - 626 (626/626)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 10, cyto_nucl 7.5, mito 4, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039320)
HIX0174093
HIT000541630 (
ENST00000443696
)
(Hypothetical short protein.)
genome : 17,662,468 - 17,669,617 (7,150)
query : 6 - 724 (719/724)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174093)
HIX0039089
HIT000080357
(
AF467442
)
Representative transcript
(Smith-Magenis syndrome chromosomal region candidate gene 5 protein;)
genome : 17,680,000 - 17,682,843 (2,844)
query : 1 - 2,843 (2,843/2,843)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 11, cyto_nucl 10.8333, cyto 6.5,
cyto_pero 4.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039089)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000009402
Pan
sp. (Chimpanzee) : ENSPTRT00000016273
HIX0039089
HIT000562275 (
NR_024007
)
(Smith-Magenis syndrome chromosomal region candidate gene 5 protein;)
genome : 17,680,000 - 17,682,843 (2,844)
query : 1 - 2,844 (2,844/2,844)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 11, cyto_nucl 10.8333, cyto 6.5,
cyto_pero 4.33333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039089)
HIX0039089
HIT000642520 (
ENST00000543475
)
(Smith-Magenis syndrome chromosomal region candidate gene 5 protein;)
genome : 17,680,000 - 17,682,843 (2,844)
query : 1 - 2,844 (2,844/2,844)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 11, cyto_nucl 10.8333, cyto 6.5,
cyto_pero 4.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039089)
HIX0224964
HIT000695479 (
ENST00000583598
)
(Conserved hypothetical protein.)
genome : 17,681,095 - 17,682,408 (1,314)
query : 1 - 466 (466/466)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 6, extr 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224964)
HIX0013588
HIT000039142
(
BC021209
)
(Retinoic acid-induced protein 1;)
genome : 17,685,446 - 17,714,718 (29,273)
query : 1 - 3,114 (3,114/3,132)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013588)
HIX0013588
HIT000479139 (
ENST00000395774
)
(Retinoic acid-induced protein 1;)
genome : 17,685,446 - 17,699,090 (13,645)
query : 1 - 2,928 (2,928/2,928)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15.5, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013588)
HIX0039309
HIT000067609
(
AF088061
)
Representative transcript
(Conserved hypothetical protein.)
genome : 17,690,209 - 17,690,774 (566)
query : 1 - 566 (566/575)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 6, nucl 4.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039309)
HIX0013588
HIT000108057 (
ENST00000261641
)
(Retinoic acid-induced protein 1;)
genome : 17,696,263 - 17,714,194 (17,932)
query : 1 - 4,923 (4,923/4,923)
2 exons
identity = 0.999
5'(1.000;0.978)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013588)
HIX0013588
HIT000246206
(
AJ271790
)
Representative transcript
(Conserved hypothetical protein.)
genome : 17,696,263 - 17,707,433 (11,171)
query : 1 - 5,667 (5,667/5,667)
7 exons
identity = 0.999
5'(1.000;0.998;1.000;0.999;0.990;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 12.3333, mito 8.5,
cyto_mito 6.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013588)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK154252
Rattus
sp. (Rat) : AY724505
Gallus
sp. (Chicken) : ENSGALT00000007807
Pongo
sp. (Orangutan) : ENSPPYT00000009403
Pan
sp. (Chimpanzee) : ENSPTRT00000016271
Takifugu
sp. (Fugu) : SINFRUT00000182663
Macaca
sp. (Macaque) : XM_001091010
Monodelphis
sp. (Opossum) : XM_001379403
Equus
sp. (Horse) : XM_001489638
Canis
sp. (Dog) : XM_546660
Bos
sp. (Cow) : XM_607410
HIX0013588
HIT000029198
(
AL834468
)
(Retinoic acid-induced protein 1;)
genome : 17,698,125 - 17,714,764 (16,640)
query : 1 - 5,329 (5,329/5,359)
4 exons
identity = 0.999
5'(1.000;0.989;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001965 : Zinc finger, PHD-type
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7.5, cyto_golg 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013588)
HIX0013588
HIT000029216
(
AL834486
)
(Retinoic acid-induced protein 1;)
genome : 17,700,277 - 17,714,764 (14,488)
query : 1 - 3,178 (3,178/3,234)
4 exons
identity = 0.999
5'(0.999;0.989;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001965 : Zinc finger, PHD-type
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013588)
HIX0013588
HIT000025116
(
AL133649
)
(Retinoic acid-induced protein 1;)
genome : 17,700,804 - 17,714,764 (13,961)
query : 1 - 2,651 (2,651/2,660)
4 exons
identity = 0.999
5'(0.999;0.989;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001965 : Zinc finger, PHD-type
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 17, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013588)
HIX0013588
HIT000695047 (
ENST00000583166
)
(Retinoic acid-induced protein 1;)
genome : 17,701,698 - 17,707,428 (5,731)
query : 1 - 489 (489/489)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013588)
HIX0013588
HIT000694405 (
ENST00000582514
)
(Non-protein coding transcript.)
genome : 17,712,596 - 17,714,003 (1,408)
query : 1 - 878 (878/878)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013588)
HIX0224248
HIT000588903 (
ENST00000485080
)
(Conserved hypothetical protein.)
genome : 17,713,713 - 17,717,083 (3,371)
query : 1 - 1,230 (1,230/1,230)
5 exons
identity = 0.996
3'(1.000;0.993;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224248)
HIX0224248
HIT000216119
(
S66168
)
(Hypothetical short protein.)
genome : 17,714,663 - 17,715,370 (708)
query : 1 - 519 (519/547)
2 exons
identity = 0.992
3'(0.995;0.976)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 7.83333, cyto 7, nucl 5.5,
cyto_plas 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224248)
HIX0224248
HIT000690411 (
ENST00000578469
)
(Hypothetical short protein.)
genome : 17,714,670 - 17,716,756 (2,087)
query : 1 - 588 (588/588)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11, cyto 9, mito 6, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224248)
HIX0224248
HIT000090819
(
BC023621
)
Representative transcript
(Conserved hypothetical protein.)
genome : 17,715,392 - 17,720,773 (5,382)
query : 21 - 2,606 (2,586/2,624)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.994;1.000)5'
coverage = 0.992
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21.5, extr_plas 13, E.R. 4.5, extr 3.5,
E.R._golg 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224248)
HIX0224248
HIT000590072 (
ENST00000486311
)
(Conserved hypothetical protein.)
genome : 17,716,026 - 17,717,690 (1,665)
query : 1 - 473 (473/473)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 15, cyto_nucl 14, cyto 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224248)
HIX0224248
HIT000582713 (
ENST00000478616
)
(Conserved hypothetical protein.)
genome : 17,716,224 - 17,717,669 (1,446)
query : 1 - 882 (882/882)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 13, nucl 10, cyto 10, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224248)
HIX0157703
HIT000471017 (
ENST00000385104
)
(Non-protein coding transcript.)
genome : 17,717,150 - 17,717,245 (96)
query : 1 - 96 (96/96)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0157703)
HIX0157703
HIT000658353 (
NR_030361
)
(Non-protein coding transcript.)
genome : 17,717,150 - 17,717,245 (96)
query : 1 - 96 (96/96)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0157703)
HIX0224248
HIT000545575 (
ENST00000447641
)
(Conserved hypothetical protein.)
genome : 17,717,658 - 17,719,709 (2,052)
query : 1 - 644 (644/644)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 13, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224248)
HIX0224248
HIT000693609 (
ENST00000581707
)
(Conserved hypothetical protein.)
genome : 17,717,717 - 17,718,687 (971)
query : 1 - 695 (695/695)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, extr 12, cyto_nucl 10.5, cyto 6, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224248)
HIX0224248
HIT000594338 (
ENST00000490796
)
(Conserved hypothetical protein.)
genome : 17,717,930 - 17,719,698 (1,769)
query : 1 - 698 (698/698)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 8.5, extr_plas 8.5, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224248)
HIX0224248
HIT000696624 (
ENST00000584760
)
(Conserved hypothetical protein.)
genome : 17,718,911 - 17,719,652 (742)
query : 1 - 564 (564/564)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 7, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224248)
HIX0224272
HIT000591105 (
ENST00000487401
)
(Myc-type, basic helix-loop-helix (bHLH) domain containing protein.)
genome : 17,720,840 - 17,721,659 (820)
query : 1 - 477 (477/477)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 13.5, cyto 8, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224272)
HIX0224272
HIT000409811
(
AB373958
)
Representative transcript
(Sterol regulatory element-binding protein 1; SREBP-1; Class D basic helix-loop-helix protein 1; bHLHd1; Sterol regulatory element-binding transcription factor 1; Contains: Processed sterol regulatory element-binding protein 1;)
genome : 17,720,880 - 17,740,131 (19,252)
query : 1 - 1,430 (1,430/1,430)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224272)
HIX0224272
HIT000533464 (
ENST00000435530
)
(Myc-type, basic helix-loop-helix (bHLH) domain containing protein.)
genome : 17,720,880 - 17,740,131 (19,252)
query : 1 - 1,430 (1,430/1,430)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224272)
HIX0224272
HIT000409812
(
AB373959
)
(Sterol regulatory element-binding protein 1 isoform a.)
genome : 17,720,880 - 17,726,856 (5,977)
query : 1 - 1,364 (1,364/1,364)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224272)
HIX0224272
HIT000574732 (
ENST00000470247
)
(Myc-type, basic helix-loop-helix (bHLH) domain containing protein.)
genome : 17,721,537 - 17,722,548 (1,012)
query : 1 - 374 (374/374)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224272)
HIX0224272
HIT000521095 (
ENST00000423161
)
(Myc-type, basic helix-loop-helix (bHLH) domain containing protein.)
genome : 17,722,341 - 17,726,932 (4,592)
query : 1 - 1,058 (1,058/1,058)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14, cyto 9, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224272)
HIX0224272
HIT000695610 (
ENST00000583732
)
(Conserved hypothetical protein.)
genome : 17,722,386 - 17,726,918 (4,533)
query : 1 - 580 (580/580)
5 exons
identity = 0.993
3'(1.000;1.000;1.000;0.968;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13.5, mito 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224272)
HIX0224272
HIT000689847 (
ENST00000577897
)
(Conserved hypothetical protein.)
genome : 17,722,435 - 17,723,824 (1,390)
query : 1 - 536 (536/536)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15, nucl 7.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224272)
HIX0224272
HIT000581163 (
ENST00000476994
)
(Conserved hypothetical protein.)
genome : 17,723,322 - 17,726,908 (3,587)
query : 1 - 591 (591/591)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224272)
HIX0224272
HIT000216118
(
S66167
)
(Non-protein coding transcript.)
genome : 17,726,836 - 17,726,906 (71)
query : 1 - 71 (71/71)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224272)
HIX0027339
HIT000055737
(
BX647090
)
Representative transcript
(Conserved hypothetical protein.)
genome : 17,729,613 - 17,730,489 (877)
query : 1 - 877 (877/894)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 11.5, cyto_nucl 11, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027339)
HIX0224161
HIT000025108
(
AL133641
)
Representative transcript
(Hypothetical short protein.)
genome : 17,746,825 - 17,747,535 (711)
query : 1 - 711 (711/727)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.978
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 6, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224161)
HIX0224161
HIT000439848
(
DQ573317
)
(Non-protein coding transcript.)
genome : 17,747,138 - 17,747,167 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224161)
HIX0224230
HIT000063410
(
AF038192
)
Representative transcript
(Twin-arginine translocation pathway, signal sequence conserved site containing protein.)
genome : 17,748,215 - 17,749,391 (1,177)
query : 1 - 1,177 (1,177/1,205)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 0.991
InterPro :
IPR006311 : Twin-arginine translocation pathway, signal sequence
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224230)
HIX0224230
HIT000252813
(
AY358769
)
(Twin-arginine translocation pathway, signal sequence conserved site containing protein.)
genome : 17,748,215 - 17,749,391 (1,177)
query : 1 - 1,177 (1,177/1,205)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 0.991
InterPro :
IPR006311 : Twin-arginine translocation pathway, signal sequence
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224230)
HIX0224581
HIT000455767
(
DQ589236
)
Representative transcript
(Non-protein coding transcript.)
genome : 17,750,054 - 17,750,083 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224581)
HIX0021733
HIT000689744 (
ENST00000577794
)
(Conserved hypothetical protein.)
genome : 17,750,648 - 17,752,263 (1,616)
query : 1 - 577 (577/577)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 10.3333, extr 9, cyto 7,
cyto_pero 4.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021733)
HIX0021733
HIT000479104 (
ENST00000395739
)
(Target of Myb1-like 2 family protein.)
genome : 17,750,663 - 17,875,718 (125,056)
query : 1 - 1,766 (1,766/1,766)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 18, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021733)
HIX0021733
HIT000489470
(
AK294846
)
Representative transcript
(TOM1-like protein 2; Target of Myb-like protein 2;)
genome : 17,750,760 - 17,875,734 (124,975)
query : 1 - 1,748 (1,748/1,748)
15 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR002014 : VHS
IPR004152 : GAT domain
IPR008942 : ENTH/VHS
IPR018205 : VHS subgroup
IPR027429 : Target of Myb1-like 2
GO :
0005622 : Cellular Component : intracellular
0006886 : Biological Process : intracellular protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 18, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021733)
HIX0021733
HIT000634978 (
ENST00000535933
)
(Target of Myb1-like 2 family protein.)
genome : 17,750,760 - 17,875,734 (124,975)
query : 1 - 1,748 (1,748/1,748)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 18, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021733)
HIX0021733
HIT000489735
(
AK295111
)
(TOM1-like protein 2 isoform 3.)
genome : 17,750,783 - 17,875,711 (124,929)
query : 1 - 1,420 (1,420/1,420)
12 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002014 : VHS
IPR004152 : GAT domain
IPR008942 : ENTH/VHS
IPR018205 : VHS subgroup
IPR027429 : Target of Myb1-like 2
GO :
0005622 : Cellular Component : intracellular
0006886 : Biological Process : intracellular protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 18, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021733)
HIX0021733
HIT000639991 (
ENST00000540946
)
(Target of Myb1-like 2 family protein.)
genome : 17,750,783 - 17,875,711 (124,929)
query : 1 - 1,420 (1,420/1,420)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 18, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021733)
HIX0021733
HIT000590168 (
ENST00000486413
)
(Conserved hypothetical protein.)
genome : 17,750,866 - 17,754,617 (3,752)
query : 1 - 680 (680/680)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 13.5, nucl 12.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021733)
HIX0021733
HIT000494496
(
AK299872
)
(TOM1-like protein 2 isoform 1.)
genome : 17,750,883 - 17,875,714 (124,832)
query : 1 - 1,320 (1,320/1,320)
13 exons
identity = 0.998
3'(0.995;0.973;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002014 : VHS
IPR004152 : GAT domain
IPR008942 : ENTH/VHS
IPR027429 : Target of Myb1-like 2
GO :
0005622 : Cellular Component : intracellular
0006886 : Biological Process : intracellular protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 17.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021733)
HIX0021733
HIT000641251 (
ENST00000542206
)
(Target of Myb1-like 2 family protein.)
genome : 17,750,883 - 17,875,714 (124,832)
query : 1 - 1,320 (1,320/1,320)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 17.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021733)
HIX0022811
HIT000096310
(
BC040660
)
(Conserved hypothetical protein.)
genome : 17,761,552 - 17,763,331 (1,780)
query : 4 - 1,783 (1,780/1,798)
1 exon
identity = 0.987
3'(0.987)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, extr 11, cyto_nucl 10.8333, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022811)
HIX0022811
HIT000014437
(
AK057830
)
Representative transcript
(Conserved hypothetical protein.)
genome : 17,761,560 - 17,763,355 (1,796)
query : 1 - 1,796 (1,796/1,796)
1 exon
identity = 0.991
3'(0.991)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 11.8333, extr 9, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022811)
HIX0224568
HIT000343545 (
ENST00000354746
)
(Hypothetical protein.)
genome : 17,761,583 - 17,762,295 (713)
query : 1 - 710 (710/710)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 12, extr 11, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224568)
HIX0021733
HIT000573487 (
ENST00000468944
)
(Conserved hypothetical protein.)
genome : 17,765,217 - 17,766,094 (878)
query : 1 - 575 (575/575)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 12, cyto_nucl 11, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021733)
HIX0021733
HIT000689470 (
ENST00000577517
)
(GAT domain containing protein.)
genome : 17,766,588 - 17,775,372 (8,785)
query : 1 - 538 (538/538)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, cyto 12, extr 10, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021733)
HIX0021733
HIT000008428
(
AK025154
)
(TOM1-like protein 2 isoform 1.)
genome : 17,767,362 - 17,772,075 (4,714)
query : 1 - 3,187 (3,187/3,203)
2 exons
identity = 0.998
3'(0.991;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16.5, cyto 10, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021733)
HIX0021733
HIT000441111
(
DQ574580
)
(Non-protein coding transcript.)
genome : 17,769,653 - 17,769,683 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021733)
HIX0021733
HIT000497929
(
AK303305
)
(TOM1-like protein 2 isoform 1.)
genome : 17,772,279 - 17,875,711 (103,433)
query : 1 - 1,221 (1,221/1,221)
7 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002014 : VHS
IPR004152 : GAT domain
IPR008942 : ENTH/VHS
IPR027429 : Target of Myb1-like 2
GO :
0005622 : Cellular Component : intracellular
0006886 : Biological Process : intracellular protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15, nucl 10.5, mito 2, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021733)
HIX0021733
HIT000636136 (
ENST00000537091
)
(Target of Myb1-like 2 family protein.)
genome : 17,772,279 - 17,875,711 (103,433)
query : 1 - 1,220 (1,220/1,220)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18, nucl 17, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021733)
HIX0021733
HIT000691512 (
ENST00000579586
)
(Target of Myb1-like 2 family protein.)
genome : 17,796,992 - 17,875,736 (78,745)
query : 1 - 453 (453/453)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 11, cyto_nucl 9.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021733)
HIX0027217
HIT000044166
(
AK124293
)
Representative transcript
(Hypothetical short protein.)
genome : 17,858,665 - 17,860,682 (2,018)
query : 1 - 2,018 (2,018/2,018)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9.5, cyto_nucl 9.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027217)
HIX0224150
HIT000559656 (
NM_001130091
)
(Leucine-rich repeat containing protein.)
genome : 17,876,127 - 17,911,142 (35,016)
query : 1 - 2,136 (2,136/2,157)
14 exons
identity = 0.996
5'(1.000;1.000;0.991;0.977;1.000;1.000;0.987;
0.983;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 23, cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224150)
HIX0224150
HIT000559657 (
NM_001130092
)
(Leucine-rich repeat containing protein.)
genome : 17,876,127 - 17,911,142 (35,016)
query : 1 - 2,047 (2,047/2,068)
13 exons
identity = 0.996
5'(1.000;0.991;0.977;1.000;1.000;0.987;0.983;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 23, cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224150)
HIX0224150
HIT000509438 (
ENST00000411504
)
(Leucine-rich repeat containing protein.)
genome : 17,876,127 - 17,911,141 (35,015)
query : 1 - 2,135 (2,135/2,135)
14 exons
identity = 0.996
5'(1.000;1.000;0.991;0.977;1.000;1.000;0.987;
0.983;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 23, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224150)
HIX0224150
HIT000694308 (
ENST00000582416
)
(Conserved hypothetical protein.)
genome : 17,876,127 - 17,887,172 (11,046)
query : 1 - 541 (541/541)
5 exons
identity = 0.991
5'(1.000;0.991;0.977;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 8, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224150)
HIX0224150
HIT000693171 (
ENST00000581264
)
(Leucine-rich repeat containing protein.)
genome : 17,876,187 - 17,891,363 (15,177)
query : 1 - 551 (551/551)
5 exons
identity = 0.991
5'(1.000;0.976;0.977;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10.5, cyto_plas 8.83333, cysk 8,
nucl 4, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224150)
HIX0224150
HIT000583732 (
ENST00000479684
)
(Conserved hypothetical protein.)
genome : 17,876,201 - 17,881,067 (4,867)
query : 1 - 558 (558/558)
3 exons
identity = 0.991
5'(1.000;0.997;0.977)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 12, nucl 6, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224150)
HIX0224150
HIT000696039 (
ENST00000584166
)
(Leucine-rich repeat containing protein.)
genome : 17,876,203 - 17,911,035 (34,833)
query : 1 - 1,953 (1,953/1,953)
14 exons
identity = 0.995
5'(1.000;1.000;0.991;0.977;1.000;1.000;0.987;
0.983;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 23, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224150)
HIX0224150
HIT000696966 (
ENST00000585108
)
(Leucine-rich repeat containing protein.)
genome : 17,876,232 - 17,891,384 (15,153)
query : 1 - 490 (490/490)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13, cyto_plas 10.6667, nucl 4.5,
cysk 4, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224150)
HIX0224150
HIT000425808
(
AK293011
)
Representative transcript
(Leucine-rich repeat-containing protein 48 isoform b.)
genome : 17,876,248 - 17,911,035 (34,788)
query : 1 - 1,908 (1,908/1,908)
14 exons
identity = 0.995
5'(1.000;1.000;0.991;0.977;1.000;1.000;0.987;
0.983;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 23, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224150)
HIX0224150
HIT000052361
(
BC040276
)
(Leucine-rich repeat-containing protein 48 isoform b.)
genome : 17,876,251 - 17,911,142 (34,892)
query : 1 - 1,923 (1,923/2,005)
13 exons
identity = 0.995
5'(1.000;0.991;0.977;1.000;1.000;0.987;0.983;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 23, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224150)
HIX0224150
HIT000482285 (
ENST00000399182
)
(Leucine-rich repeat containing protein.)
genome : 17,876,251 - 17,911,142 (34,892)
query : 1 - 1,923 (1,923/1,923)
13 exons
identity = 0.995
5'(1.000;0.991;0.977;1.000;1.000;0.987;0.983;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 23, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224150)
HIX0224150
HIT000691897 (
ENST00000579977
)
(Leucine rich repeat 4 containing protein.)
genome : 17,876,276 - 17,891,275 (15,000)
query : 1 - 573 (573/573)
5 exons
identity = 0.991
5'(1.000;0.991;0.977;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 12.5, cyto_plas 10.1667, nucl 4.5,
extr 4, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224150)
HIX0224150
HIT000696870 (
ENST00000585008
)
(Non-protein coding transcript.)
genome : 17,876,281 - 17,877,197 (917)
query : 1 - 252 (252/252)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224150)
HIX0013591
HIT000491006
(
AK296382
)
(ATP synthase mitochondrial F1 complex assembly factor 2; ATP12 homolog; Precursor;)
genome : 17,880,723 - 17,942,482 (61,760)
query : 1 - 1,298 (1,298/1,298)
7 exons
identity = 0.998
3'(0.996;0.992;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 13, mito 9, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013591)
HIX0013591
HIT000696077 (
ENST00000584205
)
(ATP synthase mitochondrial F1 complex assembly factor 2; ATP12 homolog; Precursor;)
genome : 17,880,723 - 17,942,482 (61,760)
query : 1 - 1,298 (1,298/1,298)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 13, mito 9, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013591)
HIX0174024
HIT000528023 (
ENST00000430089
)
(Brain protein I3 family protein.)
genome : 17,884,506 - 17,884,886 (381)
query : 1 - 381 (381/381)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, mito 10, plas 3, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174024)
HIX0224150
HIT000689158 (
ENST00000577202
)
(Conserved hypothetical protein.)
genome : 17,896,168 - 17,897,662 (1,495)
query : 1 - 541 (541/541)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 8, cyto_nucl 8, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224150)
HIX0224150
HIT000599620 (
ENST00000496293
)
(Conserved hypothetical protein.)
genome : 17,897,669 - 17,907,765 (10,097)
query : 1 - 586 (586/586)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11.5, extr 11, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224150)
HIX0224150
HIT000021383
(
AK096528
)
(Leucine-rich repeat-containing protein 48 isoform b.)
genome : 17,906,236 - 17,909,643 (3,408)
query : 1 - 2,732 (2,732/2,732)
2 exons
identity = 0.997
5'(0.985;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 5, cyto_nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224150)
HIX0224150
HIT000574541 (
ENST00000470048
)
(Conserved hypothetical protein.)
genome : 17,910,194 - 17,911,248 (1,055)
query : 1 - 805 (805/805)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 17, cyto 9.5, cyto_nucl 7.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224150)
HIX0224150
HIT000691305 (
ENST00000579376
)
(Conserved hypothetical protein.)
genome : 17,910,338 - 17,911,141 (804)
query : 1 - 429 (429/429)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 17, cyto 9.5, cyto_nucl 7.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224150)
HIX0174128
HIT000555233 (
ENST00000457299
)
(Ribosomal protein S5, N-terminal domain containing protein.)
genome : 17,913,957 - 17,915,136 (1,180)
query : 1 - 853 (853/853)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 8, nucl 5, mito 4, cyto_pero 4,
cyto_plas 4, cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174128)
HIX0013591
HIT000065751
(
AF070584
)
(ATP synthase mitochondrial F1 complex assembly factor 2; ATP12 homolog; Precursor;)
genome : 17,918,373 - 17,942,389 (24,017)
query : 1 - 1,737 (1,737/1,755)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 13, mito 9, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013591)
HIX0013591
HIT000567556 (
ENST00000462733
)
(ATP synthase mitochondrial F1 complex assembly factor 2; ATP12 homolog; Precursor;)
genome : 17,918,373 - 17,942,389 (24,017)
query : 1 - 1,737 (1,737/1,737)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 13, mito 9, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013591)
HIX0224404
HIT000695872 (
ENST00000583995
)
(Conserved hypothetical protein.)
genome : 17,919,041 - 17,920,188 (1,148)
query : 1 - 659 (659/674)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.5, extr 9, mito 8, cyto 7.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224404)
HIX0224404
HIT000689431 (
ENST00000577477
)
(Conserved hypothetical protein.)
genome : 17,919,125 - 17,920,173 (1,049)
query : 1 - 687 (687/687)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 20.5, cyto 17.5, cyto_plas 12.1667, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224404)
HIX0013591
HIT000696959 (
ENST00000585101
)
(ATP synthase mitochondrial F1 complex assembly factor 2; ATP12 homolog; Precursor;)
genome : 17,919,521 - 17,942,482 (22,962)
query : 1 - 566 (566/566)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 13, mito 9, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013591)
HIX0013591
HIT000578908 (
ENST00000474627
)
(ATP synthase mitochondrial F1 complex assembly factor 2; ATP12 homolog; Precursor;)
genome : 17,921,324 - 17,942,482 (21,159)
query : 1 - 1,564 (1,564/1,564)
8 exons
identity = 0.997
3'(1.000;1.000;0.966;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 12.5, cyto_nucl 10.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013591)
HIX0013591
HIT000213271 (
NM_145691
)
(ATP synthase mitochondrial F1 complex assembly factor 2; ATP12 homolog; Precursor;)
genome : 17,921,334 - 17,942,480 (21,147)
query : 1 - 1,552 (1,552/1,552)
8 exons
identity = 0.997
3'(1.000;1.000;0.966;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 12.5, cyto_nucl 10.5, cyto 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013591)
HIX0013591
HIT000423054
(
AK290257
)
Representative transcript
(ATP synthase mitochondrial F1 complex assembly factor 2; ATP12 homolog; Precursor;)
genome : 17,921,507 - 17,942,482 (20,976)
query : 1 - 1,381 (1,381/1,381)
8 exons
identity = 0.996
3'(1.000;1.000;0.966;1.000;1.000;1.000;1.000;
0.997)5'
coverage = 1.000
InterPro :
IPR011419 : ATP12, ATPase F1F0-assembly protein
IPR023335 : Orthogonal Bundle domain in ATP12
GO :
0043461 : Biological Process : proton-transporting ATP synthase complex assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 12.5, cyto_nucl 10.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013591)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB056427
Mus
sp. (Mouse) : BC013607
Bos
sp. (Cow) : BC116131
Danio
sp. (Zebrafish) : BC153513
Gallus
sp. (Chicken) : CR388503
Tetraodon
sp. (Tetraodon) : CR716107
Canis
sp. (Dog) : ENSCAFT00000029226
Equus
sp. (Horse) : ENSECAT00000020441
Monodelphis
sp. (Opossum) : ENSMODT00000017875
Oryzias
sp. (Medaka) : ENSORLT00000003986
Pongo
sp. (Orangutan) : ENSPPYT00000009410
Takifugu
sp. (Fugu) : SINFRUT00000141758
Rattus
sp. (Rat) : XM_001075912
Pan
sp. (Chimpanzee) : XM_511318
HIX0013591
HIT000041434
(
BC032126
)
(ATP synthase mitochondrial F1 complex assembly factor 2; ATP12 homolog; Precursor;)
genome : 17,921,578 - 17,942,429 (20,852)
query : 1 - 1,257 (1,257/1,281)
8 exons
identity = 0.996
3'(1.000;1.000;0.957;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR011419 : ATP12, ATPase F1F0-assembly protein
IPR023335 : Orthogonal Bundle domain in ATP12
GO :
0043461 : Biological Process : proton-transporting ATP synthase complex assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 12.5, cyto_nucl 10.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013591)
HIX0013591
HIT000251002
(
AY203943
)
(ATP synthase mitochondrial F1 complex assembly factor 2; ATP12 homolog; Precursor;)
genome : 17,921,578 - 17,942,471 (20,894)
query : 1 - 1,298 (1,298/1,321)
8 exons
identity = 0.995
3'(0.995;1.000;0.966;1.000;1.000;0.993;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR011419 : ATP12, ATPase F1F0-assembly protein
IPR023335 : Orthogonal Bundle domain in ATP12
GO :
0043461 : Biological Process : proton-transporting ATP synthase complex assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 12.5, cyto_nucl 10.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013591)
HIX0013591
HIT000064380
(
AF052185
)
(ATP synthase mitochondrial F1 complex assembly factor 2; ATP12 homolog; Precursor;)
genome : 17,921,578 - 17,942,471 (20,894)
query : 1 - 1,299 (1,299/1,320)
8 exons
identity = 0.997
3'(1.000;1.000;0.966;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR011419 : ATP12, ATPase F1F0-assembly protein
IPR023335 : Orthogonal Bundle domain in ATP12
GO :
0043461 : Biological Process : proton-transporting ATP synthase complex assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 12.5, cyto_nucl 10.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013591)
HIX0013591
HIT000050430
(
BC004114
)
(ATP synthase mitochondrial F1 complex assembly factor 2; ATP12 homolog; Precursor;)
genome : 17,921,578 - 17,942,480 (20,903)
query : 1 - 1,308 (1,308/1,326)
8 exons
identity = 0.997
3'(1.000;1.000;0.966;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR011419 : ATP12, ATPase F1F0-assembly protein
IPR023335 : Orthogonal Bundle domain in ATP12
GO :
0043461 : Biological Process : proton-transporting ATP synthase complex assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 12.5, cyto_nucl 10.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013591)
HIX0013591
HIT000600157 (
ENST00000496852
)
(ATP synthase mitochondrial F1 complex assembly factor 2; ATP12 homolog; Precursor;)
genome : 17,921,576 - 17,928,945 (7,370)
query : 1 - 1,662 (1,662/1,662)
4 exons
identity = 0.998
3'(1.000;1.000;0.966;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 18.5, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013591)
HIX0013591
HIT000572164 (
ENST00000467560
)
(ATP synthase mitochondrial F1 complex assembly factor 2; ATP12 homolog; Precursor;)
genome : 17,921,576 - 17,924,578 (3,003)
query : 1 - 567 (567/567)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 12.5, mito 8, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013591)
HIX0013591
HIT000693600 (
ENST00000581698
)
(Conserved hypothetical protein.)
genome : 17,921,578 - 17,927,985 (6,408)
query : 1 - 471 (471/471)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 12, cyto_nucl 9.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013591)
HIX0013591
HIT000573853 (
ENST00000469327
)
(ATP synthase mitochondrial F1 complex assembly factor 2; ATP12 homolog; Precursor;)
genome : 17,921,962 - 17,928,654 (6,693)
query : 1 - 681 (681/681)
6 exons
identity = 0.994
3'(1.000;1.000;1.000;0.966;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20.5, mito_pero 12, extr 7, pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013591)
HIX0013591
HIT000570039 (
ENST00000465337
)
(Conserved hypothetical protein.)
genome : 17,924,010 - 17,925,108 (1,099)
query : 1 - 894 (894/894)
3 exons
identity = 0.996
3'(1.000;1.000;0.926)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 14.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013591)
HIX0013591
HIT000592384 (
ENST00000488753
)
(Conserved hypothetical protein.)
genome : 17,924,044 - 17,929,849 (5,806)
query : 1 - 796 (796/796)
5 exons
identity = 0.995
3'(1.000;1.000;0.966;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 7, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013591)
HIX0013591
HIT000541992 (
ENST00000444058
)
(ATP synthase mitochondrial F1 complex assembly factor 2; ATP12 homolog; Precursor;)
genome : 17,925,059 - 17,942,523 (17,465)
query : 1 - 685 (685/685)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 11.5, mito 11, cyto 5.5,
E.R._mito 5.5, mito_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013591)
HIX0013591
HIT000389743
(
BC128216
)
(Conserved hypothetical protein.)
genome : 17,929,386 - 17,930,083 (698)
query : 12 - 709 (698/714)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.978
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 9, extr_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013591)
HIX0013591
HIT000435696
(
BC150162
)
(Conserved hypothetical protein.)
genome : 17,929,386 - 17,930,083 (698)
query : 11 - 708 (698/713)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.979
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 9, extr_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013591)
HIX0013591
HIT000489111
(
AK294487
)
(ATP synthase mitochondrial F1 complex assembly factor 2; ATP12 homolog; Precursor;)
genome : 17,930,661 - 17,942,482 (11,822)
query : 1 - 1,364 (1,364/1,364)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011419 : ATP12, ATPase F1F0-assembly protein
GO :
0043461 : Biological Process : proton-transporting ATP synthase complex assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 11.5, mito 11, cyto 5.5,
E.R._mito 5.5, mito_pero 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013591)
HIX0013591
HIT000689536 (
ENST00000577586
)
(ATP synthase mitochondrial F1 complex assembly factor 2; ATP12 homolog; Precursor;)
genome : 17,931,285 - 17,942,478 (11,194)
query : 1 - 551 (551/551)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 14, nucl 12.5, cyto_nucl 10.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013591)
HIX0013591
HIT000601121 (
ENST00000497871
)
(ATP synthase mitochondrial F1 complex assembly factor 2; ATP12 homolog; Precursor;)
genome : 17,931,425 - 17,942,515 (11,091)
query : 1 - 633 (633/633)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 11.5, mito 11, cyto 5.5,
E.R._mito 5.5, mito_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013591)
HIX0013592
HIT000110336 (
ENST00000268719
)
(Glucose-induced degradation protein 4 homolog.)
genome : 17,942,606 - 17,971,718 (29,113)
query : 1 - 4,237 (4,237/4,237)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, mito 11, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013592)
HIX0013592
HIT000052624
(
BC041829
)
Representative transcript
(Glucose-induced degradation protein 4 homolog.)
genome : 17,942,606 - 17,968,598 (25,993)
query : 1 - 1,117 (1,117/1,132)
6 exons
identity = 0.998
5'(0.998;0.983;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR018618 : Vacuolar import/degradation protein Vid24
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, mito 11, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013592)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK017120
Bos
sp. (Cow) : BC102715
Gallus
sp. (Chicken) : BX930655
Equus
sp. (Horse) : ENSECAT00000020295
Monodelphis
sp. (Opossum) : ENSMODT00000017882
Oryzias
sp. (Medaka) : ENSORLT00000003970
Oryzias
sp. (Medaka) : ENSORLT00000011686
Pongo
sp. (Orangutan) : ENSPPYT00000009411
Pan
sp. (Chimpanzee) : ENSPTRT00000016287
Rattus
sp. (Rat) : ENSRNOT00000005237
Tetraodon
sp. (Tetraodon) : GSTENT00024183001
Takifugu
sp. (Fugu) : SINFRUT00000141762
Macaca
sp. (Macaque) : XM_001092897
Canis
sp. (Dog) : XM_536662
HIX0013592
HIT000209084 (
NM_024052
)
(Glucose-induced degradation protein 4 homolog.)
genome : 17,942,611 - 17,971,718 (29,108)
query : 1 - 4,232 (4,232/4,232)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, mito 11, cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013592)
HIX0013592
HIT000433949
(
AK315083
)
(Glucose-induced degradation protein 4 homolog.)
genome : 17,942,724 - 17,968,557 (25,834)
query : 1 - 959 (959/959)
6 exons
identity = 0.998
5'(1.000;0.983;0.991;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR018618 : Vacuolar import/degradation protein Vid24
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, mito 11, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013592)
HIX0013592
HIT000015064
(
AK074284
)
(Glucose-induced degradation protein 4 homolog.)
genome : 17,942,736 - 17,969,440 (26,705)
query : 1 - 1,829 (1,829/1,864)
6 exons
identity = 0.998
5'(0.998;0.983;1.000;1.000;0.992;0.999)3'
coverage = 1.000
InterPro :
IPR018618 : Vacuolar import/degradation protein Vid24
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, mito 11, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013592)
HIX0013592
HIT000357625 (
ENST00000376345
)
(Glucose-induced degradation protein 4 homolog.)
genome : 17,942,759 - 17,960,781 (18,023)
query : 1 - 1,391 (1,391/1,391)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9, nucl 8.5, cyto_nucl 7.5, cyto 5.5, plas 5,
E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013592)
HIX0013592
HIT000047453
(
AK127580
)
(Glucose-induced degradation protein 4 homolog.)
genome : 17,942,924 - 17,971,718 (28,795)
query : 1 - 3,923 (3,923/3,923)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR018618 : Vacuolar import/degradation protein Vid24
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, extr 10, cyto_nucl 10, mito 5, extr_plas 5,
nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013592)
HIX0013592
HIT000029794
(
BC000636
)
(Glucose-induced degradation protein 4 homolog.)
genome : 17,942,950 - 17,968,598 (25,649)
query : 1 - 773 (773/807)
6 exons
identity = 0.999
5'(1.000;0.983;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR018618 : Vacuolar import/degradation protein Vid24
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, extr 10, cyto_nucl 10, mito 5, extr_plas 5,
nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013592)
HIX0013592
HIT000564794 (
ENST00000459843
)
(Glucose-induced degradation protein 4 homolog.)
genome : 17,957,450 - 17,965,497 (8,048)
query : 1 - 540 (540/540)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013592)
HIX0013592
HIT000585797 (
ENST00000481836
)
(Glucose-induced degradation protein 4 homolog.)
genome : 17,957,462 - 17,968,597 (11,136)
query : 1 - 481 (481/481)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013592)
HIX0013592
HIT000044250
(
AK124377
)
(Hypothetical short protein.)
genome : 17,969,371 - 17,971,718 (2,348)
query : 1 - 2,172 (2,172/2,172)
2 exons
identity = 0.996
5'(0.996;0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013592)
HIX0013592
HIT000691792 (
ENST00000579871
)
(Hypothetical short protein.)
genome : 17,969,403 - 17,971,280 (1,878)
query : 1 - 470 (470/470)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013592)
HIX0013593
HIT000198371 (
NM_001388
)
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,991,181 - 18,011,302 (20,122)
query : 1 - 2,000 (2,000/2,003)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_pero 11.8333, cyto_plas 10.8333, nucl 4,
E.R. 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000103922 (
ENST00000225729
)
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,991,200 - 18,011,285 (20,086)
query : 1 - 1,964 (1,964/1,964)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_pero 11.8333, cyto_plas 10.8333, nucl 4,
E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000689721 (
ENST00000577771
)
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,991,206 - 18,002,524 (11,319)
query : 1 - 641 (641/641)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 17, nucl 5.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000599749 (
ENST00000496428
)
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,991,235 - 18,003,251 (12,017)
query : 1 - 795 (795/795)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 17, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000479091 (
ENST00000395726
)
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,991,239 - 18,011,273 (20,035)
query : 1 - 1,897 (1,897/1,897)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 13.6667, cyto_pero 11.5,
cyto_plas 11, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000690119 (
ENST00000578173
)
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,991,241 - 18,001,796 (10,556)
query : 1 - 535 (535/535)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 10, nucl 6, cyto_mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000694208 (
ENST00000582314
)
(Ribosome-interacting GTPase 2; GTP-binding protein RBG2;)
genome : 17,991,255 - 18,005,318 (14,064)
query : 1 - 1,530 (1,530/1,530)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.976)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15, nucl 11.5, extr 2,
E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000432228
(
AK313362
)
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,991,262 - 18,010,554 (19,293)
query : 1 - 1,171 (1,171/1,171)
13 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004095 : TGS
IPR005225 : Small GTP-binding protein domain
IPR006073 : GTP binding domain
IPR006074 : GTP1/OBG, conserved site
IPR012676 : TGS-like
GO :
0005525 : Molecular Function : GTP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_pero 11.8333, cyto_plas 10.8333, nucl 4,
E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000691527 (
ENST00000579601
)
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,991,263 - 18,002,976 (11,714)
query : 1 - 550 (550/550)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 17, nucl 6.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000577554 (
ENST00000473213
)
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,991,275 - 17,997,594 (6,320)
query : 1 - 595 (595/595)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15.5, nucl 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000690705 (
ENST00000578767
)
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,991,276 - 18,002,535 (11,260)
query : 1 - 577 (577/577)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 17, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000694311 (
ENST00000582419
)
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,991,279 - 18,002,364 (11,086)
query : 1 - 565 (565/565)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 11.5, cyto 9.5, mito 6, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000691975 (
ENST00000580055
)
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,991,280 - 18,011,241 (19,962)
query : 1 - 1,838 (1,838/1,838)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 13.1667, cyto_pero 11.5,
cyto_plas 11, nucl 4, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000260484
(
BC062572
)
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,991,282 - 18,011,284 (20,003)
query : 1 - 2,531 (2,531/2,569)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.998;1.000;1.000;
1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR004095 : TGS
IPR012676 : TGS-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15, nucl 9.5, mito 4,
E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000571720 (
ENST00000467099
)
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,991,282 - 18,011,284 (20,003)
query : 1 - 2,531 (2,531/2,531)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 16, nucl 10.5, mito 3,
E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000029675
(
BC000493
)
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,991,283 - 18,011,285 (20,003)
query : 1 - 1,881 (1,881/1,899)
13 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.989;
1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 0.999
InterPro :
IPR004095 : TGS
IPR005225 : Small GTP-binding protein domain
IPR006073 : GTP binding domain
IPR006074 : GTP1/OBG, conserved site
IPR012676 : TGS-like
GO :
0005525 : Molecular Function : GTP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_pero 11.8333, cyto_plas 10.8333, nucl 4,
E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000492193
(
AK297569
)
(Ribosome-interacting GTPase 2; GTP-binding protein RBG2;)
genome : 17,991,286 - 18,005,318 (14,033)
query : 1 - 1,499 (1,499/1,502)
8 exons
identity = 0.996
5'(1.000;0.994;1.000;1.000;0.996;1.000;1.000;
0.976)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15.5, nucl 10, mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000691154 (
ENST00000579224
)
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,991,286 - 18,003,982 (12,697)
query : 1 - 683 (683/683)
7 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.970)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 15.8333, cyto_pero 12.1667,
nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000689404 (
ENST00000577450
)
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,991,288 - 18,003,919 (12,632)
query : 1 - 566 (566/566)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 18, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000696084 (
ENST00000584212
)
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,991,288 - 18,001,778 (10,491)
query : 1 - 465 (465/465)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 17, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000692839 (
ENST00000580929
)
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,991,290 - 18,004,831 (13,542)
query : 1 - 389 (389/389)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15, nucl 7.5, extr 2, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000323814
(
X80754
)
Representative transcript
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,991,291 - 18,011,292 (20,002)
query : 1 - 1,880 (1,880/1,880)
13 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004095 : TGS
IPR005225 : Small GTP-binding protein domain
IPR006073 : GTP binding domain
IPR006074 : GTP1/OBG, conserved site
IPR012676 : TGS-like
GO :
0005525 : Molecular Function : GTP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_pero 11.8333, cyto_plas 10.8333, nucl 4,
E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB170580
Mus
sp. (Mouse) : AJ243590
Gallus
sp. (Chicken) : AJ719873
Danio
sp. (Zebrafish) : AY398336
Bos
sp. (Cow) : BT021741
Tetraodon
sp. (Tetraodon) : CR661180
Pongo
sp. (Orangutan) : CR857302
Oryzias
sp. (Medaka) : ENSORLT00000016441
Takifugu
sp. (Fugu) : SINFRUT00000156742
Pan
sp. (Chimpanzee) : XM_001158504
Monodelphis
sp. (Opossum) : XM_001364408
Equus
sp. (Horse) : XM_001488236
Canis
sp. (Dog) : XM_536661
Rattus
sp. (Rat) : XM_573102
HIX0013593
HIT000490199
(
AK295575
)
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,991,293 - 18,003,573 (12,281)
query : 1 - 1,065 (1,065/1,067)
5 exons
identity = 0.998
5'(1.000;0.994;1.000;1.000;0.998)3'
coverage = 0.998
InterPro :
IPR005225 : Small GTP-binding protein domain
IPR006073 : GTP binding domain
GO :
0005525 : Molecular Function : GTP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 17, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000695043 (
ENST00000583162
)
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,991,293 - 18,003,575 (12,283)
query : 1 - 1,066 (1,066/1,066)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 17, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000695236 (
ENST00000583355
)
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,991,321 - 18,010,914 (19,594)
query : 1 - 891 (891/891)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 18, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000099896
(
BT006976
)
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,991,338 - 18,010,553 (19,216)
query : 1 - 1,094 (1,094/1,095)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.989;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR004095 : TGS
IPR005225 : Small GTP-binding protein domain
IPR006073 : GTP binding domain
IPR006074 : GTP1/OBG, conserved site
IPR012676 : TGS-like
GO :
0005525 : Molecular Function : GTP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_pero 11.8333, cyto_plas 10.8333, nucl 4,
E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000329275
(
AB209340
)
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,999,036 - 18,011,284 (12,249)
query : 2 - 5,343 (5,342/5,343)
9 exons
identity = 0.998
5'(0.995;0.999;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004095 : TGS
IPR012676 : TGS-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 16, nucl 10.5, mito 3,
E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000694419 (
ENST00000582528
)
(Developmentally-regulated GTP-binding protein 2; DRG-2;)
genome : 17,999,036 - 18,011,284 (12,249)
query : 1 - 5,342 (5,342/5,342)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 16, nucl 10.5, mito 3,
E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000601005 (
ENST00000497744
)
(Conserved hypothetical protein.)
genome : 18,007,874 - 18,011,255 (3,382)
query : 1 - 964 (964/964)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 3, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000020610
(
AK095755
)
(Conserved hypothetical protein.)
genome : 18,008,761 - 18,011,283 (2,523)
query : 1 - 1,856 (1,856/1,856)
2 exons
identity = 0.999
5'(0.999;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto_mito 9, mito 8.5, cyto_nucl 8, cyto 7.5,
cyto_pero 5.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013593
HIT000586489 (
ENST00000482564
)
(Conserved hypothetical protein.)
genome : 18,008,761 - 18,011,283 (2,523)
query : 1 - 1,856 (1,856/1,856)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto_mito 9, mito 8.5, cyto_nucl 8, cyto 7.5,
cyto_pero 5.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013593)
HIX0013594
HIT000012487
(
AK055873
)
Representative transcript
(Conserved hypothetical protein.)
genome : 18,010,648 - 18,013,777 (3,130)
query : 1 - 3,130 (3,130/3,130)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, cyto 5.5, mito 5, cyto_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013594)
HIX0013595
HIT000071274_02
(
AF144094
)
Representative transcript
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,012,020 - 18,083,116 (71,097)
query : 1 - 11,863 (11,863/11,876)
65 exons
identity = 0.999
5'(1.000;0.999;1.000;1.000;1.000;1.000;1.000;
0.973;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.989;1.000;
1.000;0.974;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR000299 : FERM domain
IPR000857 : MyTH4 domain
IPR001452 : SH3 domain
IPR001609 : Myosin head, motor domain
IPR011511 : Variant SH3 domain
IPR019748 : FERM central domain
IPR019749 : Band 4.1 domain
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0005856 : Cellular Component : cytoskeleton
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 17, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013595)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169475
Mus
sp. (Mouse) : AF144095
Bos
sp. (Cow) : ENSBTAT00000035016
Canis
sp. (Dog) : ENSCAFT00000029106
Monodelphis
sp. (Opossum) : ENSMODT00000039515
Oryzias
sp. (Medaka) : ENSORLT00000011569
Oryzias
sp. (Medaka) : ENSORLT00000016502
Pongo
sp. (Orangutan) : ENSPPYT00000009414
Tetraodon
sp. (Tetraodon) : GSTENT00015752001
Tetraodon
sp. (Tetraodon) : GSTENT00021703001
Takifugu
sp. (Fugu) : SINFRUT00000145173
Takifugu
sp. (Fugu) : SINFRUT00000155652
Danio
sp. (Zebrafish) : XM_001919558
Danio
sp. (Zebrafish) : XM_001924016
Rattus
sp. (Rat) : XM_577100
Pan
sp. (Chimpanzee) : XR_025562
Equus
sp. (Horse) : XR_044712
HIX0013595
HIT000205983_01 (
NM_016239
)
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,012,020 - 18,083,116 (71,097)
query : 1 - 11,863 (11,863/11,876)
65 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.973;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 17, cyto 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013595)
HIX0013595
HIT000102798_02 (
ENST00000205890
)
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,012,020 - 18,083,116 (71,097)
query : 1 - 11,863 (11,863/11,863)
65 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.973;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 17, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013595)
HIX0013595
HIT000329358
(
AB209423
)
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,022,482 - 18,029,022 (6,541)
query : 1 - 6,540 (6,540/6,540)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, mito 11, cyto_nucl 10.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013595)
HIX0013595
HIT000694960 (
ENST00000583079
)
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,022,482 - 18,028,880 (6,399)
query : 1 - 6,399 (6,399/6,399)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, mito 11, cyto_nucl 10.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013595)
HIX0013595
HIT000510258 (
ENST00000412324
)
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,042,588 - 18,045,451 (2,864)
query : 1 - 719 (719/719)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 7.5, cyto_nucl 7.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013595)
HIX0013595
HIT000690935 (
ENST00000578999
)
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,049,328 - 18,053,265 (3,938)
query : 1 - 1,204 (1,204/1,228)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013595)
HIX0013595
HIT000495153
(
AK300529
)
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,057,368 - 18,060,852 (3,485)
query : 1 - 1,009 (1,009/1,009)
6 exons
identity = 0.998
5'(1.000;0.991;0.992;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR011511 : Variant SH3 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 15.5, nucl 9, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013595)
HIX0013595
HIT000635856 (
ENST00000536811
)
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,057,368 - 18,060,852 (3,485)
query : 1 - 1,009 (1,009/1,009)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 15.5, nucl 9, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013595)
HIX0013595
HIT000697038 (
ENST00000585180
)
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,057,392 - 18,059,583 (2,192)
query : 1 - 494 (494/494)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013595)
HIX0013595
HIT000670493 (
ENST00000557190
)
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,061,622 - 18,066,598 (4,977)
query : 1 - 481 (481/481)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 7.5, cyto_nucl 7.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013595)
HIX0013595
HIT000669853 (
ENST00000556535
)
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,061,622 - 18,065,979 (4,358)
query : 1 - 573 (573/573)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 6, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013595)
HIX0013595
HIT000670951 (
ENST00000557655
)
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,061,626 - 18,065,994 (4,369)
query : 1 - 510 (510/517)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.986
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 5.5, cyto_nucl 5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013595)
HIX0013595
HIT000690414 (
ENST00000578472
)
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,061,652 - 18,064,751 (3,100)
query : 1 - 568 (568/568)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013595)
HIX0013595
HIT000026714
(
AL713794
)
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,062,238 - 18,083,116 (20,879)
query : 20 - 3,051 (3,032/3,110)
12 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991;0.965;0.999)3'
coverage = 0.994
InterPro :
IPR000857 : MyTH4 domain
IPR019748 : FERM central domain
GO :
0005856 : Cellular Component : cytoskeleton
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 10.5, cyto_nucl 9.83333, cyto 6,
cyto_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013595)
HIX0013595
HIT000531345 (
ENST00000433411
)
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,062,238 - 18,083,116 (20,879)
query : 20 - 3,051 (3,032/3,051)
12 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991;0.972;1.000)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 10.3333, extr 10, cyto 6,
cyto_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013595)
HIX0013595
HIT000493449
(
AK298825
)
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,063,239 - 18,082,258 (19,020)
query : 9 - 998 (990/998)
8 exons
identity = 0.997
5'(0.968;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.992
InterPro :
IPR000857 : MyTH4 domain
GO :
0005856 : Cellular Component : cytoskeleton
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, extr 7, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013595)
HIX0013595
HIT000549659 (
ENST00000451725
)
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,063,239 - 18,082,258 (19,020)
query : 9 - 998 (990/998)
8 exons
identity = 0.997
5'(0.968;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, extr 7, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013595)
HIX0013595
HIT000691770 (
ENST00000579848
)
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,063,239 - 18,082,258 (19,020)
query : 9 - 998 (990/998)
8 exons
identity = 0.997
5'(0.968;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, extr 7, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013595)
HIX0013595
HIT000054846
(
BX538062
)
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,064,061 - 18,068,406 (4,346)
query : 1 - 2,212 (2,212/2,232)
4 exons
identity = 0.992
5'(0.997;1.000;1.000;0.988)3'
coverage = 1.000
InterPro :
IPR000857 : MyTH4 domain
GO :
0005856 : Cellular Component : cytoskeleton
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 9, cyto_nucl 7, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013595)
HIX0013595
HIT000577356 (
ENST00000473013
)
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,064,061 - 18,068,406 (4,346)
query : 1 - 2,225 (2,225/2,243)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 10, cyto_nucl 9, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013595)
HIX0013595
HIT000429098
(
AK310232
)
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,064,682 - 18,082,184 (17,503)
query : 1 - 1,046 (1,046/1,046)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000)3'
coverage = 1.000
InterPro :
IPR000857 : MyTH4 domain
GO :
0005856 : Cellular Component : cytoskeleton
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 11, cyto_nucl 10.5, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013595)
HIX0013595
HIT000690516 (
ENST00000578575
)
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,064,682 - 18,082,184 (17,503)
query : 1 - 1,046 (1,046/1,046)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 11, cyto_nucl 10.5, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013595)
HIX0039442
HIT000689797 (
ENST00000577847
)
(RNA demethylase ALKBH5.)
genome : 18,075,939 - 18,087,981 (12,043)
query : 1 - 513 (513/513)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 4.33333, cyto 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039442)
HIX0039442
HIT000095233
(
BC038464
)
Representative transcript
(RNA demethylase ALKBH5.)
genome : 18,079,878 - 18,088,067 (8,190)
query : 1 - 2,159 (2,159/2,190)
2 exons
identity = 0.996
3'(0.995;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 8.5, extr_plas 8.5, cyto_nucl 6.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039442)
HIX0039442
HIT000694943 (
ENST00000583062
)
(RNA demethylase ALKBH5.)
genome : 18,079,879 - 18,088,067 (8,189)
query : 1 - 2,158 (2,158/2,158)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 4.5, nucl 3, cyto_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039442)
HIX0013596
HIT000430027
(
AK311161
)
(RNA demethylase ALKBH5; EC=1.14.11.-; Alkylated DNA repair protein alkB homolog 5; Alpha-ketoglutarate-dependent dioxygenase alkB homolog 5;)
genome : 18,086,392 - 18,112,712 (26,321)
query : 1 - 1,605 (1,605/1,605)
4 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.14.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 14.5, cyto 8, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013596)
HIX0013596
HIT000640330 (
ENST00000541285
)
(RNA demethylase ALKBH5; EC=1.14.11.-; Alkylated DNA repair protein alkB homolog 5; Alpha-ketoglutarate-dependent dioxygenase alkB homolog 5;)
genome : 18,086,392 - 18,112,712 (26,321)
query : 1 - 1,605 (1,605/1,605)
4 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.14.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 14.5, cyto 8, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013596)
HIX0013596
HIT000206628 (
NM_017758
)
(RNA demethylase ALKBH5; EC=1.14.11.-; Alkylated DNA repair protein alkB homolog 5; Alpha-ketoglutarate-dependent dioxygenase alkB homolog 5;)
genome : 18,086,867 - 18,113,266 (26,400)
query : 1 - 3,432 (3,432/3,449)
4 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.14.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 19.5, extr_plas 10.5, nucl 5, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013596)
HIX0013596
HIT000495731
(
AK301107
)
(RNA demethylase ALKBH5.)
genome : 18,087,180 - 18,111,729 (24,550)
query : 1 - 1,278 (1,278/1,278)
5 exons
identity = 0.994
5'(0.973;0.997;0.988)3'
coverage = 1.000
InterPro :
IPR027450 : Alpha-ketoglutarate-dependent dioxygenase AlkB-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22.5, cyto_mito 14.3333, mito_nucl 14.3333,
mito_pero 12.8333, cyto_nucl 4.33333, nucl 3.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013596)
HIX0013596
HIT000260339
(
BC062339
)
Representative transcript
(RNA demethylase ALKBH5.)
genome : 18,087,289 - 18,113,266 (25,978)
query : 1 - 2,962 (2,962/2,992)
5 exons
identity = 0.999
5'(0.999;1.000)3'
coverage = 1.000
InterPro :
IPR027450 : Alpha-ketoglutarate-dependent dioxygenase AlkB-like
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013596)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB179027
Mus
sp. (Mouse) : AK162072
Danio
sp. (Zebrafish) : BC124804
Oryzias
sp. (Medaka) : ENSORLT00000011580
Takifugu
sp. (Fugu) : SINFRUT00000134923
Rattus
sp. (Rat) : XM_001077537
Pan
sp. (Chimpanzee) : XM_001158112
Monodelphis
sp. (Opossum) : XM_001364322
Equus
sp. (Horse) : XM_001918210
Canis
sp. (Dog) : XM_846626
Bos
sp. (Cow) : XR_027533
HIX0013596
HIT000002790
(
AK000315
)
(RNA demethylase ALKBH5; EC=1.14.11.-; Alkylated DNA repair protein alkB homolog 5; Alpha-ketoglutarate-dependent dioxygenase alkB homolog 5;)
genome : 18,087,561 - 18,112,832 (25,272)
query : 46 - 2,349 (2,304/2,371)
4 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.14.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr_plas 8, plas 7.5, extr 7.5, mito 5, golg 5,
mito_pero 4, nucl 3, cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013596)
HIX0013596
HIT000482244 (
ENST00000399138
)
(RNA demethylase ALKBH5; EC=1.14.11.-; Alkylated DNA repair protein alkB homolog 5; Alpha-ketoglutarate-dependent dioxygenase alkB homolog 5;)
genome : 18,087,553 - 18,113,268 (25,716)
query : 1 - 2,748 (2,748/2,748)
4 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.14.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 19.5, extr_plas 10.5, nucl 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013596)
HIX0013596
HIT000430377
(
AK311511
)
(RNA demethylase ALKBH5.)
genome : 18,088,070 - 18,112,489 (24,420)
query : 1 - 1,340 (1,340/1,340)
4 exons
identity = 0.990
5'(0.993;0.967)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 14.5, cyto 8, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013596)
HIX0013597
HIT000016075
(
AK091208
)
(Conserved hypothetical protein.)
genome : 18,089,284 - 18,092,380 (3,097)
query : 1 - 3,097 (3,097/3,097)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 4, mito 4, cyto_mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013597)
HIX0013597
HIT000007109
(
AK023835
)
Representative transcript
(Conserved hypothetical protein.)
genome : 18,090,751 - 18,095,263 (4,513)
query : 1 - 4,512 (4,512/4,512)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 6, cyto 4.5, cyto_pero 4.33333,
cyto_nucl 4.16667, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013597)
HIX0225199
HIT000469062
(
EF553518
)
Representative transcript
(Coiled-coil domain-containing protein 144B;)
genome : 16,593,575 - 16,707,767 (114,193)
query : 2 - 8,802 (8,801/8,879)
26 exons
identity = 0.995
5'(0.981;1.000;0.988;0.986;0.988;0.993;0.941;
1.000;1.000;0.995;0.984;0.996;1.000;0.995;
1.000;1.000;0.997;1.000;1.000;1.000;1.000;
1.000;0.997;1.000;0.989;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 12.3333, nucl 8.5, cyto_golg 8.5,
mito 5, golg 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225199)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB074451
Mus
sp. (Mouse) : BC047067
Bos
sp. (Cow) : BT026252
Pan
sp. (Chimpanzee) : XM_001145281
HIX0225199
HIT000541378 (
ENST00000443444
)
(Coiled-coil domain-containing protein 144A;)
genome : 16,593,575 - 16,707,767 (114,193)
query : 1 - 8,912 (8,912/8,912)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_mito 8.5, nucl 6, mito_pero 5.83333,
pero 4.5, mito 4, plas 2.5, extr_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225199)
HIX0225199
HIT000546265 (
ENST00000448331
)
(Coiled-coil domain-containing protein 144A;)
genome : 16,593,575 - 16,707,767 (114,193)
query : 1 - 8,802 (8,802/8,802)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 7.5, cyto_nucl 5.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225199)
HIX0225158
HIT000007732
(
AK024458
)
Representative transcript
(Rab-GTPase-TBC domain containing protein.)
genome : 16,826,229 - 16,838,153 (11,925)
query : 1 - 4,838 (4,838/4,838)
14 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.974;0.999;1.000)5'
coverage = 1.000
InterPro :
IPR000195 : Rab-GTPase-TBC domain
GO :
0005097 : Molecular Function : Rab GTPase activator activity
0032313 : Biological Process : regulation of Rab GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225158)
HIX0225158
HIT000108063 (
ENST00000261651
)
(Rab-GTPase-TBC domain containing protein.)
genome : 16,826,229 - 16,838,153 (11,925)
query : 1 - 4,838 (4,838/4,838)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.974;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225158)
HIX0225158
HIT000497922
(
AK303298
)
(Tumour necrosis factor receptor 13B family protein.)
genome : 16,832,849 - 16,875,398 (42,550)
query : 2 - 1,398 (1,397/1,398)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.991;
1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR015384 : TACI, cysteine-rich domain
IPR022317 : Tumour necrosis factor receptor 13B
GO :
0005887 : Cellular Component : integral component of plasma membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 11, plas 7, cyto 3.5,
cysk_plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225158)
HIX0225158
HIT000535472 (
ENST00000437538
)
(Tumour necrosis factor receptor 13B family protein.)
genome : 16,832,849 - 16,875,398 (42,550)
query : 1 - 1,397 (1,397/1,397)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 11, plas 7, cyto 3.5,
cysk_plas 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225158)
HIX0225158
HIT000696812 (
ENST00000584950
)
(Tumour necrosis factor receptor 13B family protein.)
genome : 16,833,130 - 16,875,401 (42,272)
query : 1 - 1,266 (1,266/1,266)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 11, plas 7, cyto 3.5,
cysk_plas 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225158)
HIX0225158
HIT000694815 (
ENST00000582931
)
(Tumour necrosis factor receptor 13B family protein.)
genome : 16,836,047 - 16,875,431 (39,385)
query : 1 - 554 (554/554)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 13, extr 8, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225158)
HIX0225158
HIT000691244 (
ENST00000579315
)
(Tumour necrosis factor receptor 13B family protein.)
genome : 16,836,379 - 16,875,432 (39,054)
query : 1 - 600 (600/600)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 14.3333, extr 6, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225158)
HIX0225171
HIT000317208 (
NM_015134
)
(Myosin phosphatase Rho-interacting protein isoform 1.)
genome : 16,946,074 - 17,095,962 (149,889)
query : 1 - 10,960 (10,960/10,960)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225171)
HIX0225171
HIT000319796 (
NM_201274
)
(Myosin phosphatase Rho-interacting protein; M-RIP; Rho-interacting protein 3; RIP3; p116Rip;)
genome : 16,946,074 - 17,095,962 (149,889)
query : 1 - 11,023 (11,023/11,023)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225171)
HIX0225171
HIT000479176 (
ENST00000395811
)
(Myosin phosphatase Rho-interacting protein isoform 1.)
genome : 16,946,074 - 17,088,874 (142,801)
query : 1 - 3,872 (3,872/3,872)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225171)
HIX0225171
HIT000500496
(
BC136479
)
(Myosin phosphatase Rho-interacting protein isoform 1.)
genome : 16,946,083 - 17,088,369 (142,287)
query : 1 - 3,355 (3,355/3,355)
23 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.987;1.000;
0.993;1.000;1.000;1.000;1.000;1.000;0.998;
1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225171)
HIX0225171
HIT000542910 (
ENST00000444976
)
(Myosin phosphatase Rho-interacting protein isoform 1.)
genome : 16,946,083 - 17,088,369 (142,287)
query : 1 - 3,244 (3,244/3,244)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225171)
HIX0225171
HIT000242194
(
AB098507
)
Representative transcript
(Myosin phosphatase Rho-interacting protein isoform 1.)
genome : 16,946,107 - 17,088,871 (142,765)
query : 1 - 3,833 (3,833/3,833)
23 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.987;1.000;
0.993;1.000;1.000;1.000;1.000;1.000;0.996;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225171)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF311311
Bos
sp. (Cow) : BC153230
Danio
sp. (Zebrafish) : BC155850
Gallus
sp. (Chicken) : CR523904
Macaca
sp. (Macaque) : ENSMMUT00000018726
Monodelphis
sp. (Opossum) : ENSMODT00000005907
Oryzias
sp. (Medaka) : ENSORLT00000009195
Oryzias
sp. (Medaka) : ENSORLT00000017052
Pongo
sp. (Orangutan) : ENSPPYT00000009393
Pan
sp. (Chimpanzee) : ENSPTRT00000016254
Tetraodon
sp. (Tetraodon) : GSTENT00024039001
Takifugu
sp. (Fugu) : SINFRUT00000139211
Takifugu
sp. (Fugu) : SINFRUT00000163176
Mus
sp. (Mouse) : U73200
Equus
sp. (Horse) : XM_001488526
Canis
sp. (Dog) : XM_536669
HIX0225171
HIT000479169 (
ENST00000395804
)
(Myosin phosphatase Rho-interacting protein; M-RIP; Rho-interacting protein 3; RIP3; p116Rip;)
genome : 16,946,107 - 17,083,953 (137,847)
query : 1 - 3,134 (3,134/3,134)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225171)
HIX0225171
HIT000134342 (
ENST00000341712
)
(Myosin phosphatase Rho-interacting protein; M-RIP; Rho-interacting protein 3; RIP3; p116Rip;)
genome : 16,946,163 - 17,088,874 (142,712)
query : 1 - 3,846 (3,846/3,846)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225171)
HIX0225171
HIT000242549
(
AB189741
)
(Myosin phosphatase Rho-interacting protein isoform 1.)
genome : 16,946,163 - 17,088,208 (142,046)
query : 1 - 3,111 (3,111/3,111)
23 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;0.970;1.000;
1.000;0.991;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225171)
HIX0225171
HIT000251489
(
AY296247
)
(Myosin phosphatase Rho-interacting protein; M-RIP; Rho-interacting protein 3; RIP3; p116Rip;)
genome : 16,946,163 - 17,083,953 (137,791)
query : 1 - 3,075 (3,075/3,075)
23 exons
identity = 0.998
5'(0.992;1.000;1.000;1.000;1.000;0.987;1.000;
1.000;1.000;1.000;1.000;0.989;1.000;0.996;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225171)
HIX0225171
HIT000029243
(
AL834513
)
(Myosin phosphatase Rho-interacting protein isoform 1.)
genome : 16,979,022 - 17,088,871 (109,850)
query : 11 - 3,729 (3,719/3,839)
23 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.987;1.000;0.993;
1.000;1.000;1.000;1.000;1.000;0.996;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.997
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 17, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225171)
HIX0225171
HIT000261043
(
BC063588
)
(Myosin phosphatase Rho-interacting protein isoform 2.)
genome : 16,979,049 - 17,075,077 (96,029)
query : 1 - 2,058 (2,058/2,072)
15 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.987;1.000;0.993;
1.000;1.000;1.000;1.000;1.000;0.998;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 18, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225171)
HIX0225171
HIT000088277
(
BC014102
)
(Myosin phosphatase Rho-interacting protein isoform 1.)
genome : 16,979,074 - 17,088,871 (109,798)
query : 1 - 1,728 (1,728/1,773)
10 exons
identity = 0.993
5'(1.000;1.000;1.000;1.000;0.974;0.950;1.000;
0.994;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225171)
HIX0225198
HIT000428202
(
AK309336
)
Representative transcript
(Conserved hypothetical protein.)
genome : 17,105,963 - 17,140,497 (34,535)
query : 3 - 1,693 (1,691/1,693)
12 exons
identity = 0.998
3'(1.000;0.973;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.989;1.000;0.996)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225198)
HIX0225198
HIT000525431 (
ENST00000427497
)
(Conserved hypothetical protein.)
genome : 17,105,963 - 17,140,499 (34,537)
query : 1 - 1,693 (1,693/1,693)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225198)
HIX0013583
HIT000200463 (
NM_003653
)
(Proteasome component (PCI) domain containing protein.)
genome : 17,149,938 - 17,184,617 (34,680)
query : 1 - 1,863 (1,863/1,865)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14, nucl 9.5, cyto_mito 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013583)
HIX0013583
HIT000656439 (
NM_001199125
)
(Proteasome component (PCI) domain containing protein.)
genome : 17,149,938 - 17,184,012 (34,075)
query : 1 - 1,816 (1,816/1,818)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 13.5, nucl 5, mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013583)
HIX0013583
HIT000638986 (
ENST00000539941
)
(Proteasome component (PCI) domain containing protein.)
genome : 17,150,141 - 17,184,091 (33,951)
query : 1 - 1,692 (1,692/1,692)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 13.5, nucl 5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013583)
HIX0013583
HIT000496928
(
AK302304
)
(COP9 signalosome complex subunit 3; SGN3; Signalosome subunit 3; JAB1-containing signalosome subunit 3;)
genome : 17,150,141 - 17,184,012 (33,872)
query : 1 - 1,613 (1,613/1,613)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000717 : Proteasome component (PCI) domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 13.5, nucl 5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013583)
HIX0013583
HIT000110335 (
ENST00000268717
)
(Proteasome component (PCI) domain containing protein.)
genome : 17,150,150 - 17,184,607 (34,458)
query : 1 - 1,641 (1,641/1,641)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14, nucl 9.5, cyto_mito 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013583)
HIX0013583
HIT000068523
(
AF098109
)
Representative transcript
(COP9 signalosome complex subunit 3; SGN3; Signalosome subunit 3; JAB1-containing signalosome subunit 3;)
genome : 17,150,150 - 17,184,542 (34,393)
query : 1 - 1,576 (1,576/1,576)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000717 : Proteasome component (PCI) domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14, nucl 9.5, cyto_mito 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013583)
HIX0013583
HIT000063074
(
AF031647
)
(COP9 signalosome complex subunit 3 isoform 2.)
genome : 17,150,150 - 17,184,514 (34,365)
query : 10 - 1,556 (1,547/1,556)
12 exons
identity = 0.997
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.957)5'
coverage = 0.994
InterPro :
IPR000717 : Proteasome component (PCI) domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 13.5, nucl 5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013583)
HIX0013583
HIT000492330
(
AK297706
)
(COP9 signalosome complex subunit 3; SGN3; Signalosome subunit 3; JAB1-containing signalosome subunit 3;)
genome : 17,150,151 - 17,184,505 (34,355)
query : 1 - 1,625 (1,625/1,625)
12 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000717 : Proteasome component (PCI) domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 8.5, cyto_nucl 6, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013583)
HIX0013583
HIT000690262 (
ENST00000578317
)
(Proteasome component (PCI) domain containing protein.)
genome : 17,150,151 - 17,184,505 (34,355)
query : 1 - 1,625 (1,625/1,625)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 10.5, cyto_nucl 7, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013583)
HIX0013583
HIT000500013
(
AK316400
)
(COP9 signalosome complex subunit 3; SGN3; Signalosome subunit 3; JAB1-containing signalosome subunit 3;)
genome : 17,150,181 - 17,184,091 (33,911)
query : 1 - 1,652 (1,652/1,652)
12 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;1.000;1.000;0.990)5'
coverage = 1.000
InterPro :
IPR000717 : Proteasome component (PCI) domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 13.5, nucl 5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013583)
HIX0013583
HIT000537870 (
ENST00000439936
)
(Proteasome component (PCI) domain containing protein.)
genome : 17,150,188 - 17,184,014 (33,827)
query : 1 - 1,394 (1,394/1,394)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12, mito 4, nucl 3, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013583)
HIX0013583
HIT000030726
(
BC001891
)
(COP9 signalosome complex subunit 3; SGN3; Signalosome subunit 3; JAB1-containing signalosome subunit 3;)
genome : 17,150,223 - 17,184,591 (34,369)
query : 1 - 1,552 (1,552/1,584)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000717 : Proteasome component (PCI) domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14, nucl 9.5, cyto_mito 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013583)
HIX0013583
HIT000431342
(
AK312476
)
(COP9 signalosome complex subunit 3; SGN3; Signalosome subunit 3; JAB1-containing signalosome subunit 3;)
genome : 17,150,412 - 17,184,558 (34,147)
query : 1 - 1,330 (1,330/1,330)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000717 : Proteasome component (PCI) domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14, nucl 9.5, cyto_mito 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013583)
HIX0027133
HIT000074018
(
AF210652
)
Representative transcript
(5'(3')-deoxyribonucleotidase, mitochondrial; 5',3'-nucleotidase, mitochondrial; EC=3.1.3.-; Deoxy-5'-nucleotidase 2; dNT-2; Precursor;)
genome : 17,206,649 - 17,250,975 (44,327)
query : 1 - 1,617 (1,617/1,617)
5 exons
identity = 0.996
5'(0.998;1.000;1.000;0.967;0.998)3'
coverage = 1.000
EC number :
EC 3.1.3.-
InterPro :
IPR010708 : 5'(3')-deoxyribonucleotidase
IPR023214 : HAD-like domain
GO :
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, mito_pero 12.5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027133)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK035283
Bos
sp. (Cow) : ENSBTAT00000043576
Canis
sp. (Dog) : ENSCAFT00000029310
Pongo
sp. (Orangutan) : ENSPPYT00000009397
Tetraodon
sp. (Tetraodon) : GSTENT00014222001
Takifugu
sp. (Fugu) : SINFRUT00000159634
Rattus
sp. (Rat) : XM_001077280
Macaca
sp. (Macaque) : XM_001089849
Pan
sp. (Chimpanzee) : XM_001160220
Monodelphis
sp. (Opossum) : XM_001362455
Equus
sp. (Horse) : XM_001488421
Gallus
sp. (Chicken) : XM_414809
HIX0027133
HIT000395932 (
ENST00000389022
)
(5'(3')-deoxyribonucleotidase, mitochondrial; 5',3'-nucleotidase, mitochondrial; EC=3.1.3.-; Deoxy-5'-nucleotidase 2; dNT-2; Precursor;)
genome : 17,206,649 - 17,250,975 (44,327)
query : 1 - 1,617 (1,617/1,617)
5 exons
identity = 0.997
5'(1.000;1.000;1.000;0.967;0.999)3'
coverage = 1.000
EC number :
EC 3.1.3.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, mito_pero 12.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027133)
HIX0027133
HIT000207799 (
NM_020201
)
(5'(3')-deoxyribonucleotidase, mitochondrial; 5',3'-nucleotidase, mitochondrial; EC=3.1.3.-; Deoxy-5'-nucleotidase 2; dNT-2; Precursor;)
genome : 17,206,680 - 17,250,976 (44,297)
query : 1 - 1,587 (1,587/1,633)
5 exons
identity = 0.997
5'(1.000;1.000;1.000;0.967;0.999)3'
coverage = 1.000
EC number :
EC 3.1.3.5
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
00760 : Nicotinate and nicotinamide metabolism (44)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, mito_pero 12.5, nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027133)
HIX0027133
HIT000574891 (
ENST00000470418
)
(5'(3')-deoxyribonucleotidase, mitochondrial; 5',3'-nucleotidase, mitochondrial; EC=3.1.3.-; Deoxy-5'-nucleotidase 2; dNT-2; Precursor;)
genome : 17,206,704 - 17,250,172 (43,469)
query : 1 - 895 (895/895)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 7, extr 4, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027133)
HIX0027133
HIT000051527
(
BC035838
)
(5'(3')-deoxyribonucleotidase, mitochondrial; 5',3'-nucleotidase, mitochondrial; EC=3.1.3.-; Deoxy-5'-nucleotidase 2; dNT-2; Precursor;)
genome : 17,206,706 - 17,250,976 (44,271)
query : 1 - 1,561 (1,561/1,607)
5 exons
identity = 0.996
5'(1.000;1.000;1.000;0.967;0.998)3'
coverage = 1.000
EC number :
EC 3.1.3.-
InterPro :
IPR010708 : 5'(3')-deoxyribonucleotidase
IPR023214 : HAD-like domain
GO :
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, mito_pero 12.5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027133)
HIX0027133
HIT000342967
(
DQ323995
)
(5'(3')-deoxyribonucleotidase, mitochondrial; 5',3'-nucleotidase, mitochondrial; EC=3.1.3.-; Deoxy-5'-nucleotidase 2; dNT-2; Precursor;)
genome : 17,206,865 - 17,250,261 (43,397)
query : 1 - 705 (705/705)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;0.992;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.-
InterPro :
IPR010708 : 5'(3')-deoxyribonucleotidase
IPR023214 : HAD-like domain
GO :
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, mito_pero 12.5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027133)
HIX0027133
HIT000587579 (
ENST00000483704
)
(5'(3')-deoxyribonucleotidase, mitochondrial; 5',3'-nucleotidase, mitochondrial; EC=3.1.3.-; Deoxy-5'-nucleotidase 2; dNT-2; Precursor;)
genome : 17,206,992 - 17,250,977 (43,986)
query : 1 - 1,408 (1,408/1,408)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13.5, nucl 6, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027133)
HIX0027133
HIT000694794 (
ENST00000582909
)
(5'(3')-deoxyribonucleotidase, mitochondrial; 5',3'-nucleotidase, mitochondrial; EC=3.1.3.-; Deoxy-5'-nucleotidase 2; dNT-2; Precursor;)
genome : 17,236,825 - 17,250,522 (13,698)
query : 1 - 615 (615/615)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, mito_pero 13.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027133)
HIX0020381
HIT000200943 (
NM_004176
)
(Sterol regulatory element-binding protein 1; SREBP-1; Class D basic helix-loop-helix protein 1; bHLHd1; Sterol regulatory element-binding transcription factor 1; Contains: Processed sterol regulatory element-binding protein 1;)
genome : 17,714,663 - 17,740,325 (25,663)
query : 1 - 4,911 (4,911/4,922)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 14, plas 13, cyto 2, pero 2, cyto_pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020381)
HIX0020381
HIT000316115 (
NM_001005291
)
(Sterol regulatory element-binding protein 1; SREBP-1; Class D basic helix-loop-helix protein 1; bHLHd1; Sterol regulatory element-binding transcription factor 1; Contains: Processed sterol regulatory element-binding protein 1;)
genome : 17,714,663 - 17,740,325 (25,663)
query : 1 - 5,001 (5,001/5,012)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 14, nucl 13, cyto 2, pero 2, cyto_pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020381)
HIX0020381
HIT000131484 (
ENST00000338854
)
(Sterol regulatory element-binding protein 1; SREBP-1; Class D basic helix-loop-helix protein 1; bHLHd1; Sterol regulatory element-binding transcription factor 1; Contains: Processed sterol regulatory element-binding protein 1;)
genome : 17,715,069 - 17,740,325 (25,257)
query : 1 - 3,410 (3,410/3,410)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 15, plas 12, cyto 2, pero 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020381)
HIX0020381
HIT000260802
(
BC063281
)
(Sterol regulatory element-binding protein 1; SREBP-1; Class D basic helix-loop-helix protein 1; bHLHd1; Sterol regulatory element-binding transcription factor 1; Contains: Processed sterol regulatory element-binding protein 1;)
genome : 17,715,392 - 17,740,300 (24,909)
query : 1 - 4,247 (4,247/4,262)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0046983 : Molecular Function : protein dimerization activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 14, nucl 13, cyto 2, pero 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020381)
HIX0020381
HIT000091309
(
BC026962
)
(Sterol regulatory element-binding protein 1; SREBP-1; Class D basic helix-loop-helix protein 1; bHLHd1; Sterol regulatory element-binding transcription factor 1; Contains: Processed sterol regulatory element-binding protein 1;)
genome : 17,715,392 - 17,721,223 (5,832)
query : 1 - 2,798 (2,798/2,813)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020381)
HIX0020381
HIT000259687
(
BC057388
)
Representative transcript
(Sterol regulatory element-binding protein 1; SREBP-1; Class D basic helix-loop-helix protein 1; bHLHd1; Sterol regulatory element-binding transcription factor 1; Contains: Processed sterol regulatory element-binding protein 1;)
genome : 17,715,392 - 17,740,316 (24,925)
query : 1 - 4,173 (4,173/4,187)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.996;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.996)5'
coverage = 1.000
InterPro :
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0046983 : Molecular Function : protein dimerization activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 14, plas 13, cyto 2, pero 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020381)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : AB355703
Canis
sp. (Dog) : AF535158
Mus
sp. (Mouse) : AK052628
Danio
sp. (Zebrafish) : ENSDART00000092690
Oryzias
sp. (Medaka) : ENSORLT00000011833
Pongo
sp. (Orangutan) : ENSPPYT00000009404
Tetraodon
sp. (Tetraodon) : GSTENT00022476001
Rattus
sp. (Rat) : L16995
Takifugu
sp. (Fugu) : SINFRUT00000180145
Macaca
sp. (Macaque) : XM_001095392
Monodelphis
sp. (Opossum) : XM_001379375
Equus
sp. (Horse) : XM_001918214
Pan
sp. (Chimpanzee) : XR_024614
HIX0020381
HIT000108060 (
ENST00000261646
)
(Sterol regulatory element-binding protein 1; SREBP-1; Class D basic helix-loop-helix protein 1; bHLHd1; Sterol regulatory element-binding transcription factor 1; Contains: Processed sterol regulatory element-binding protein 1;)
genome : 17,715,387 - 17,740,316 (24,930)
query : 1 - 4,178 (4,178/4,178)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 14, plas 13, cyto 2, pero 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020381)
HIX0020381
HIT000309902 (
ENST00000355815
)
(Sterol regulatory element-binding protein 1; SREBP-1; Class D basic helix-loop-helix protein 1; bHLHd1; Sterol regulatory element-binding transcription factor 1; Contains: Processed sterol regulatory element-binding protein 1;)
genome : 17,715,387 - 17,740,301 (24,915)
query : 1 - 4,253 (4,253/4,253)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 14, nucl 13, cyto 2, pero 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020381)
HIX0020381
HIT000015998
(
AK091131
)
(Sterol regulatory element-binding protein 1 isoform a.)
genome : 17,715,387 - 17,726,944 (11,558)
query : 2 - 4,016 (4,015/4,016)
19 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;0.993;0.995;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0046983 : Molecular Function : protein dimerization activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, nucl 10, cyto 2, pero 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020381)
HIX0020381
HIT000329544
(
AB209609
)
(Sterol regulatory element-binding protein 1 isoform a.)
genome : 17,715,387 - 17,724,178 (8,792)
query : 1 - 4,653 (4,653/4,653)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21.5, extr_plas 13, E.R. 4.5, extr 3.5,
E.R._golg 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020381)
HIX0020381
HIT000479116 (
ENST00000395751
)
(Sterol regulatory element-binding protein 1 isoform a.)
genome : 17,715,387 - 17,724,178 (8,792)
query : 1 - 4,653 (4,653/4,653)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21.5, extr_plas 13, E.R. 4.5, extr 3.5,
E.R._golg 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020381)
HIX0020381
HIT000048193
(
AK128320
)
(Sterol regulatory element-binding protein 1; SREBP-1; Class D basic helix-loop-helix protein 1; bHLHd1; Sterol regulatory element-binding transcription factor 1; Contains: Processed sterol regulatory element-binding protein 1;)
genome : 17,715,387 - 17,723,265 (7,879)
query : 1 - 3,696 (3,696/3,696)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0046983 : Molecular Function : protein dimerization activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, nucl 4, cyto 2, pero 2, cyto_pero 2,
mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020381)
HIX0020381
HIT000479122 (
ENST00000395757
)
(Sterol regulatory element-binding protein 1; SREBP-1; Class D basic helix-loop-helix protein 1; bHLHd1; Sterol regulatory element-binding transcription factor 1; Contains: Processed sterol regulatory element-binding protein 1;)
genome : 17,715,387 - 17,723,265 (7,879)
query : 1 - 3,696 (3,696/3,696)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, nucl 4, cyto 2, pero 2, cyto_pero 2,
mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020381)
HIX0020381
HIT000479121 (
ENST00000395756
)
(Sterol regulatory element-binding protein 1; SREBP-1; Class D basic helix-loop-helix protein 1; bHLHd1; Sterol regulatory element-binding transcription factor 1; Contains: Processed sterol regulatory element-binding protein 1;)
genome : 17,715,387 - 17,721,641 (6,255)
query : 1 - 3,026 (3,026/3,026)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, E.R. 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020381)
HIX0020381
HIT000217408
(
U00968
)
(Sterol regulatory element-binding protein 1; SREBP-1; Class D basic helix-loop-helix protein 1; bHLHd1; Sterol regulatory element-binding transcription factor 1; Contains: Processed sterol regulatory element-binding protein 1;)
genome : 17,715,392 - 17,740,294 (24,903)
query : 4 - 4,154 (4,151/4,154)
19 exons
identity = 1.000
3'(1.000;1.000;0.995;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0046983 : Molecular Function : protein dimerization activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 14, plas 13, cyto 2, pero 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020381)
HIX0020381
HIT000491737
(
AK297113
)
(Sterol regulatory element-binding protein 1 isoform a.)
genome : 17,715,393 - 17,726,944 (11,552)
query : 4 - 3,595 (3,592/3,595)
17 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.996;0.994;1.000)5'
coverage = 0.999
InterPro :
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0046983 : Molecular Function : protein dimerization activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, nucl 10, cyto 2, pero 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020381)
HIX0020381
HIT000020180
(
AK095325
)
(Sterol regulatory element-binding protein 1; SREBP-1; Class D basic helix-loop-helix protein 1; bHLHd1; Sterol regulatory element-binding transcription factor 1; Contains: Processed sterol regulatory element-binding protein 1;)
genome : 17,715,393 - 17,721,641 (6,249)
query : 1 - 3,020 (3,020/3,020)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, E.R. 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020381)
HIX0020381
HIT000488419
(
AK293795
)
(Sterol regulatory element-binding protein 1 isoform a.)
genome : 17,715,643 - 17,726,944 (11,302)
query : 2 - 3,631 (3,630/3,631)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0046983 : Molecular Function : protein dimerization activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, nucl 10, cyto 2, pero 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020381)
HIX0020381
HIT000489424
(
AK294800
)
(Sterol regulatory element-binding protein 1 isoform a.)
genome : 17,715,682 - 17,726,944 (11,263)
query : 1 - 3,570 (3,570/3,570)
20 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.991;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;0.870;1.000)5'
coverage = 1.000
InterPro :
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0046983 : Molecular Function : protein dimerization activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, nucl 11, cyto 2, pero 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020381)
HIX0020381
HIT000575874 (
ENST00000471445
)
(Sterol regulatory element-binding protein 1; SREBP-1; Class D basic helix-loop-helix protein 1; bHLHd1; Sterol regulatory element-binding transcription factor 1; Contains: Processed sterol regulatory element-binding protein 1;)
genome : 17,719,771 - 17,721,064 (1,294)
query : 1 - 936 (936/936)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, mito 7, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020381)
HIX0020381
HIT000573881 (
ENST00000469356
)
(Sterol regulatory element-binding protein 1; SREBP-1; Class D basic helix-loop-helix protein 1; bHLHd1; Sterol regulatory element-binding transcription factor 1; Contains: Processed sterol regulatory element-binding protein 1;)
genome : 17,719,839 - 17,722,056 (2,218)
query : 1 - 1,323 (1,323/1,323)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020381)
HIX0020381
HIT000692454 (
ENST00000580540
)
(Sterol regulatory element-binding protein 1; SREBP-1; Class D basic helix-loop-helix protein 1; bHLHd1; Sterol regulatory element-binding transcription factor 1; Contains: Processed sterol regulatory element-binding protein 1;)
genome : 17,720,437 - 17,721,214 (778)
query : 1 - 540 (540/540)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, nucl 2, cyto 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020381)
HIX0020381
HIT000694961 (
ENST00000583080
)
(Sterol regulatory element-binding protein 1; SREBP-1; Class D basic helix-loop-helix protein 1; bHLHd1; Sterol regulatory element-binding transcription factor 1; Contains: Processed sterol regulatory element-binding protein 1;)
genome : 17,720,738 - 17,721,463 (726)
query : 1 - 482 (482/482)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 9, cyto_mito 9, cyto_nucl 6.5,
E.R._mito 6.5, mito_pero 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020381)
HIX0173678
HIT000366151 (
NM_001033551
)
(TOM1-like protein 2 isoform 1.)
genome : 17,746,822 - 17,875,784 (128,963)
query : 1 - 5,658 (5,658/5,675)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 17.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173678)
HIX0173678
HIT000398230 (
NM_001082968
)
(TOM1-like protein 2; Target of Myb-like protein 2;)
genome : 17,746,822 - 17,875,784 (128,963)
query : 1 - 5,808 (5,808/5,825)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 18, cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173678)
HIX0173678
HIT000693302 (
ENST00000581396
)
(TOM1-like protein 2 isoform 1.)
genome : 17,746,828 - 17,875,724 (128,897)
query : 1 - 5,592 (5,592/5,592)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173678)
HIX0173678
HIT000012573
(
AK055959
)
(Twin-arginine translocation pathway, signal sequence conserved site containing protein.)
genome : 17,746,828 - 17,750,374 (3,547)
query : 1 - 3,547 (3,547/3,547)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
InterPro :
IPR006311 : Twin-arginine translocation pathway, signal sequence
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173678)
HIX0173678
HIT000053647
(
BC051650
)
(TOM1-like protein 2 isoform 1.)
genome : 17,750,139 - 17,875,724 (125,586)
query : 1 - 2,281 (2,281/2,296)
14 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002014 : VHS
IPR004152 : GAT domain
IPR008942 : ENTH/VHS
IPR027429 : Target of Myb1-like 2
GO :
0005622 : Cellular Component : intracellular
0006886 : Biological Process : intracellular protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173678)
HIX0173678
HIT000360783 (
ENST00000379504
)
(TOM1-like protein 2; Target of Myb-like protein 2;)
genome : 17,750,139 - 17,875,711 (125,573)
query : 1 - 2,418 (2,418/2,418)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 18, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173678)
HIX0173678
HIT000583029 (
ENST00000478943
)
(TOM1-like protein 2 isoform 1.)
genome : 17,750,139 - 17,775,378 (25,240)
query : 1 - 2,098 (2,098/2,098)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173678)
HIX0173678
HIT000080356
(
AF467441
)
(TOM1-like protein 2 isoform 3.)
genome : 17,750,142 - 17,875,718 (125,577)
query : 1 - 1,903 (1,903/1,903)
15 exons
identity = 0.975
3'(1.000;0.980;1.000;1.000;1.000;0.992;0.871;
0.878;0.948;1.000;0.975;0.987;1.000;1.000;
0.979)5'
coverage = 1.000
InterPro :
IPR002014 : VHS
IPR004152 : GAT domain
IPR008942 : ENTH/VHS
IPR018205 : VHS subgroup
IPR027429 : Target of Myb1-like 2
GO :
0005622 : Cellular Component : intracellular
0006886 : Biological Process : intracellular protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, mito 5, cyto 4, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173678)
HIX0173678
HIT000013922
(
AK057308
)
(TOM1-like protein 2 isoform 1.)
genome : 17,750,159 - 17,775,377 (25,219)
query : 1 - 2,077 (2,077/2,077)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004152 : GAT domain
IPR027429 : Target of Myb1-like 2
GO :
0005622 : Cellular Component : intracellular
0006886 : Biological Process : intracellular protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173678)
HIX0173678
HIT000044204
(
AK124331
)
Representative transcript
(TOM1-like protein 2; Target of Myb-like protein 2;)
genome : 17,750,163 - 17,875,711 (125,549)
query : 2 - 2,395 (2,394/2,395)
15 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.993;1.000;0.987;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR002014 : VHS
IPR004152 : GAT domain
IPR008942 : ENTH/VHS
IPR018205 : VHS subgroup
IPR027429 : Target of Myb1-like 2
GO :
0005622 : Cellular Component : intracellular
0006886 : Biological Process : intracellular protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 18, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173678)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF467887
Bos
sp. (Cow) : BC142312
Gallus
sp. (Chicken) : CR354318
Danio
sp. (Zebrafish) : ENSDART00000017620
Oryzias
sp. (Medaka) : ENSORLT00000004041
Pongo
sp. (Orangutan) : ENSPPYT00000009407
Tetraodon
sp. (Tetraodon) : GSTENT00033432001
Takifugu
sp. (Fugu) : SINFRUT00000133400
Rattus
sp. (Rat) : XM_001075832
Macaca
sp. (Macaque) : XM_001091726
Monodelphis
sp. (Opossum) : XM_001379276
Equus
sp. (Horse) : XM_001488292
Canis
sp. (Dog) : XM_859513
Pan
sp. (Chimpanzee) : XR_024610
HIX0173678
HIT000121553 (
ENST00000318094
)
(TOM1-like protein 2 isoform 3.)
genome : 17,750,163 - 17,875,711 (125,549)
query : 1 - 2,259 (2,259/2,259)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 18, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173678)
HIX0173678
HIT000496568
(
AK301944
)
(TOM1-like protein 2 isoform 3.)
genome : 17,750,163 - 17,875,711 (125,549)
query : 1 - 2,259 (2,259/2,259)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002014 : VHS
IPR004152 : GAT domain
IPR008942 : ENTH/VHS
IPR018205 : VHS subgroup
IPR027429 : Target of Myb1-like 2
GO :
0005622 : Cellular Component : intracellular
0006886 : Biological Process : intracellular protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 18, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173678)
HIX0013589
HIT000210120 (
NM_031294
)
(Leucine-rich repeat-containing protein 48 isoform a.)
genome : 17,876,127 - 17,920,188 (44,062)
query : 1 - 2,065 (2,065/2,094)
14 exons
identity = 0.996
5'(1.000;0.991;0.977;1.000;1.000;0.987;0.983;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 22, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013589)
HIX0013589
HIT000559655 (
NM_001130090
)
(Leucine-rich repeat-containing protein 48 isoform a.)
genome : 17,876,127 - 17,920,188 (44,062)
query : 1 - 2,154 (2,154/2,183)
15 exons
identity = 0.996
5'(1.000;1.000;0.991;0.977;1.000;1.000;0.987;
0.983;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 22, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013589)
HIX0013589
HIT000119905 (
ENST00000313838
)
(Leucine-rich repeat-containing protein 48 isoform a.)
genome : 17,876,127 - 17,920,185 (44,059)
query : 1 - 2,151 (2,151/2,151)
15 exons
identity = 0.996
5'(1.000;1.000;0.991;0.977;1.000;1.000;0.987;
0.983;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 22, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013589)
HIX0013589
HIT000053263
(
BC047873
)
(Leucine-rich repeat-containing protein 48 isoform a.)
genome : 17,876,199 - 17,920,173 (43,975)
query : 1 - 1,978 (1,978/2,078)
14 exons
identity = 0.994
5'(1.000;0.991;0.977;1.000;1.000;0.974;0.983;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 22, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013589)
HIX0013589
HIT000482289 (
ENST00000399187
)
(Leucine-rich repeat-containing protein 48 isoform a.)
genome : 17,876,199 - 17,920,188 (43,990)
query : 1 - 1,993 (1,993/2,008)
14 exons
identity = 0.995
5'(1.000;0.991;0.977;1.000;1.000;0.987;0.983;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 22, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013589)
HIX0013589
HIT000025522
(
AL136926
)
(Leucine-rich repeat-containing protein 48 isoform b.)
genome : 17,876,217 - 17,920,173 (43,957)
query : 2 - 5,806 (5,805/5,822)
11 exons
identity = 0.999
5'(1.000;0.991;0.977;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 26, cyto 4.5, cyto_nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013589)
HIX0013589
HIT000594074 (
ENST00000490517
)
(Leucine-rich repeat-containing protein 48 isoform b.)
genome : 17,876,217 - 17,920,173 (43,957)
query : 1 - 5,805 (5,805/5,805)
11 exons
identity = 0.999
5'(1.000;0.991;0.977;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 26, cyto 4.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013589)
HIX0013589
HIT000053444
(
BC050419
)
Representative transcript
(Leucine-rich repeat-containing protein 48 isoform a.)
genome : 17,876,972 - 17,920,173 (43,202)
query : 18 - 2,000 (1,983/2,052)
14 exons
identity = 0.994
5'(0.979;0.991;0.977;1.000;1.000;0.987;0.983;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.992
InterPro :
IPR001611 : Leucine-rich repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 22, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013589)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169051
Mus
sp. (Mouse) : BC018412
Rattus
sp. (Rat) : BC083838
Bos
sp. (Cow) : BC149900
Gallus
sp. (Chicken) : CR386279
Canis
sp. (Dog) : ENSCAFT00000029240
Equus
sp. (Horse) : ENSECAT00000020558
Monodelphis
sp. (Opossum) : ENSMODT00000017886
Pongo
sp. (Orangutan) : ENSPPYT00000009409
Takifugu
sp. (Fugu) : SINFRUT00000133398
Pan
sp. (Chimpanzee) : XR_021648
HIX0013589
HIT000053546
(
BC050665
)
(Leucine-rich repeat-containing protein 48 isoform a.)
genome : 17,876,972 - 17,920,188 (43,217)
query : 14 - 2,011 (1,998/2,040)
14 exons
identity = 0.994
5'(0.990;0.991;0.977;1.000;1.000;0.974;0.983;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.994
InterPro :
IPR001611 : Leucine-rich repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 22, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013589)
HIX0013589
HIT000482287 (
ENST00000399185
)
(Leucine-rich repeat-containing protein 48 isoform a.)
genome : 17,876,972 - 17,920,188 (43,217)
query : 1 - 1,999 (1,999/2,014)
14 exons
identity = 0.996
5'(1.000;0.991;0.977;1.000;1.000;0.987;0.983;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 22, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013589)
HIX0013589
HIT000018184
(
AK093317
)
(Leucine-rich repeat-containing protein 48 isoform a.)
genome : 17,877,164 - 17,920,172 (43,009)
query : 12 - 1,900 (1,889/1,900)
13 exons
identity = 0.995
5'(0.991;0.977;1.000;0.994;0.987;0.983;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.994
InterPro :
IPR001611 : Leucine-rich repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 22, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013589)
HIX0013589
HIT000695052 (
ENST00000583171
)
(Leucine-rich repeat-containing protein 48 isoform b.)
genome : 17,896,079 - 17,919,965 (23,887)
query : 1 - 878 (878/878)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 8.66667, nucl 7, cyto 6, mito 5,
cyto_pero 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013589)
HIX0225201
HIT000516167 (
ENST00000418233
)
(Variant SH3 domain containing protein.)
genome : 18,056,709 - 18,082,536 (25,828)
query : 1 - 3,411 (3,411/3,411)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 16, nucl 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225201)
HIX0225201
HIT000491803
(
AK297179
)
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,057,021 - 18,075,908 (18,888)
query : 1 - 1,919 (1,919/1,919)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000299 : FERM domain
IPR000857 : MyTH4 domain
IPR019748 : FERM central domain
IPR019749 : Band 4.1 domain
GO :
0005856 : Cellular Component : cytoskeleton
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 16, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225201)
HIX0225201
HIT000488660
(
AK294036
)
Representative transcript
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,057,102 - 18,082,536 (25,435)
query : 1 - 3,018 (3,018/3,018)
24 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000)3'
coverage = 1.000
InterPro :
IPR000299 : FERM domain
IPR000857 : MyTH4 domain
IPR001452 : SH3 domain
IPR011511 : Variant SH3 domain
IPR019748 : FERM central domain
IPR019749 : Band 4.1 domain
GO :
0005515 : Molecular Function : protein binding
0005856 : Cellular Component : cytoskeleton
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 16, nucl 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225201)
HIX0225201
HIT000492265
(
AK297641
)
(Unconventional myosin-XV; Unconventional myosin-15;)
genome : 18,057,368 - 18,075,830 (18,463)
query : 1 - 1,345 (1,345/1,345)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000857 : MyTH4 domain
GO :
0005856 : Cellular Component : cytoskeleton
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, cyto 12, extr 11, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225201)
HIX0225201
HIT000543223 (
ENST00000445289
)
(MyTH4 domain containing protein.)
genome : 18,057,368 - 18,075,830 (18,463)
query : 1 - 1,345 (1,345/1,345)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, cyto 12, extr 11, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225201)
HIX0194949
pHIT000116655 ( pHIT000116655 )
Representative transcript
(Conserved hypothetical protein.)
genome : 17,145,340 - 17,146,163 (824)
query : 1 - 762 (762/762)
3 exons
InterPro :
IPR004000 : Actin family
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194949)
CAGE tag :
T17R01054FE1
Ortholog candidate ( ->
Evola
)
Tetraodon
sp. (Tetraodon) : CR734615
Pan
sp. (Chimpanzee) : XR_020992
HIX0194949
pHIT000028672 ( pHIT000028672 )
(Conserved hypothetical protein.)
genome : 17,145,340 - 17,145,933 (594)
query : 1 - 594 (594/594)
1 exon
InterPro :
IPR004000 : Actin family
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194949)
CAGE tag :
H05BA68D2201,H06BA07E1704,H08BA52M0302
H21BA54D0502,H21BA98P1507
HIX0194982
pHIT000028677 ( pHIT000028677 )
Representative transcript
(Hypothetical short protein.)
genome : 17,258,424 - 17,265,657 (7,234)
query : 1 - 117 (117/117)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194982)
CAGE tag :
H09BA89M1903,H22BA40E1510
AC005822.1
16500001-16527061 F +
NCBI
AC092714.2
16527062-16528449 F +
NCBI
AC098850.2
16528450-16706020 F +
NCBI
AC022596.9
16706021-16778101 F -
NCBI
AL353996.3
16778102-16854982 F -
NCBI
AC104024.8
16854983-16945801 F -
NCBI
AC079111.7
16945802-17075820 F +
NCBI
AC055811.20
17075821-17184689 F +
NCBI
AC006071.1
17184690-17264713 F +
NCBI
AC073621.21
17264714-17402661 F -
NCBI
AC020558.4
17402662-17580746 F +
NCBI
AC078903.11
17580747-17655372 F -
NCBI
AC122129.9
17655373-17805444 F +
NCBI
AC087163.10
17805445-17942647 F -
NCBI
AC087164.9
17942648-18093661 F -
NCBI
AC109515.6
18093662-18100000 F -
NCBI