bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0194990
HIT000698923_05 (
ENST00000587078
)
(Hypothetical protein.)
genome : 44,581,615 - 45,099,087 (517,473)
query : 1 - 501 (501/501)
2 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 8.5, cyto_nucl 8.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194990)
HIX0224661
HIT000684981 (
ENST00000572349
)
(Non-protein coding transcript.)
genome : 44,994,136 - 45,000,400 (6,265)
query : 1 - 395 (395/395)
3 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224661)
HIX0013916
HIT000034522
(
BC009710
)
(Golgi SNAP receptor complex member 2; 27 kDa Golgi SNARE protein; Membrin;)
genome : 45,000,512 - 45,016,276 (15,765)
query : 1 - 836 (836/874)
6 exons
identity = 0.999
5'(0.987;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR010989 : t-SNARE
GO :
0016020 : Cellular Component : membrane
0016192 : Biological Process : vesicle-mediated transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, pero 9, mito 7, cyto_nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0013916
HIT000074531
(
AF229796
)
Representative transcript
(Golgi SNAP receptor complex member 2; 27 kDa Golgi SNARE protein; Membrin;)
genome : 45,000,528 - 45,018,161 (17,634)
query : 1 - 855 (855/874)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR010989 : t-SNARE
GO :
0016020 : Cellular Component : membrane
0016192 : Biological Process : vesicle-mediated transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 21, cyto 18, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ719943
Mus
sp. (Mouse) : BC008525
Danio
sp. (Zebrafish) : BC053235
Rattus
sp. (Rat) : BC061994
Bos
sp. (Cow) : BC142254
Tetraodon
sp. (Tetraodon) : CR684867
Canis
sp. (Dog) : ENSCAFT00000021291
Equus
sp. (Horse) : ENSECAT00000016025
Oryzias
sp. (Medaka) : ENSORLT00000005703
Pongo
sp. (Orangutan) : ENSPPYT00000009691
Takifugu
sp. (Fugu) : SINFRUT00000170005
Macaca
sp. (Macaque) : XM_001115690
Monodelphis
sp. (Opossum) : XM_001375805
Pan
sp. (Chimpanzee) : XM_511625
HIX0013916
HIT000051228
(
BC034762
)
(Golgi SNAP receptor complex member 2 isoform C.)
genome : 45,000,540 - 45,014,204 (13,665)
query : 1 - 2,165 (2,165/2,209)
5 exons
identity = 0.999
5'(0.979;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR010989 : t-SNARE
GO :
0016020 : Cellular Component : membrane
0016192 : Biological Process : vesicle-mediated transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, cyto 15, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0039303
HIT000067058
(
AF086179
)
Representative transcript
(Hypothetical short protein.)
genome : 45,016,521 - 45,017,225 (705)
query : 10 - 714 (705/714)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12, mito 8, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039303)
HIX0202510
HIT000339094
(
BC108690
)
(Reprimo-like protein;)
genome : 45,055,518 - 45,056,589 (1,072)
query : 1 - 1,074 (1,074/1,112)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 7, cyto 6, pero 5.5, extr 5, cyto_plas 5,
mito_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202510)
HIX0202510
HIT000051148
(
BC033942
)
Representative transcript
(Reprimo-like protein;)
genome : 45,055,522 - 45,056,614 (1,093)
query : 6 - 1,100 (1,095/1,134)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.995
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 7, cyto 6, pero 5.5, extr 5, cyto_plas 5,
mito_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202510)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK141598
Danio
sp. (Zebrafish) : BC142802
Equus
sp. (Horse) : ENSECAT00000017367
Oryzias
sp. (Medaka) : ENSORLT00000004218
Pongo
sp. (Orangutan) : ENSPPYT00000009690
Tetraodon
sp. (Tetraodon) : GSTENT00022069001
Takifugu
sp. (Fugu) : SINFRUT00000182747
Rattus
sp. (Rat) : XM_001065414
Macaca
sp. (Macaque) : XM_001115662
Pan
sp. (Chimpanzee) : XM_001134654
Monodelphis
sp. (Opossum) : XM_001368383
Bos
sp. (Cow) : XM_868807
HIX0202510
HIT000320023 (
NM_203400
)
(Reprimo-like protein;)
genome : 45,055,522 - 45,056,614 (1,093)
query : 1 - 1,093 (1,093/1,110)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 7, cyto 6, pero 5.5, extr 5, cyto_plas 5,
mito_pero 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202510)
HIX0202510
HIT000123105 (
ENST00000322329
)
(Reprimo-like protein;)
genome : 45,055,523 - 45,056,614 (1,092)
query : 1 - 1,092 (1,092/1,092)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 7, cyto 6, pero 5.5, extr 5, cyto_plas 5,
mito_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202510)
HIX0136179
HIT000454385
(
DQ587854
)
Representative transcript
(Non-protein coding transcript.)
genome : 45,060,417 - 45,060,446 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0136179)
HIX0136329
HIT000459593
(
DQ593062
)
Representative transcript
(Non-protein coding transcript.)
genome : 45,060,473 - 45,060,502 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0136329)
HIX0194990
HIT000688056 (
ENST00000575930
)
(Conserved hypothetical protein.)
genome : 45,061,411 - 45,144,818 (83,408)
query : 1 - 685 (685/685)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 7.5, extr_plas 7.5, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194990)
HIX0194990
HIT000684588 (
ENST00000571901
)
(Conserved hypothetical protein.)
genome : 45,076,066 - 45,144,835 (68,770)
query : 1 - 808 (808/808)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 9.5, cyto_nucl 8.5, cyto_mito 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194990)
HIX0194990
HIT000683220 (
ENST00000570314
)
(Hypothetical short protein.)
genome : 45,082,984 - 45,098,989 (16,006)
query : 1 - 254 (254/254)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194990)
HIX0194990
HIT000683935 (
ENST00000571143
)
(Hypothetical short protein.)
genome : 45,087,830 - 45,099,032 (11,203)
query : 1 - 358 (358/358)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 8, cyto_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194990)
HIX0173770
HIT000441462_11
(
DQ574931
)
Representative transcript
(Non-protein coding transcript.)
genome : 45,093,824 - 45,093,853 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173770)
HIX0194990
HIT000687406 (
ENST00000575173
)
(Conserved hypothetical protein.)
genome : 45,095,413 - 45,144,903 (49,491)
query : 1 - 1,081 (1,081/1,081)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 11, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194990)
HIX0212437
HIT000460756_09
(
DQ594225
)
Representative transcript
(Non-protein coding transcript.)
genome : 45,097,642 - 45,097,672 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212437)
HIX0027323
HIT000262089
(
BC065911
)
Representative transcript
(Leucine-rich repeat-containing protein 37A3; Precursor;)
genome : 45,125,430 - 45,128,397 (2,968)
query : 1 - 2,969 (2,969/2,987)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 4, mito 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027323)
HIX0027323
HIT000261409
(
BC064489
)
(Conserved hypothetical protein.)
genome : 45,125,430 - 45,126,744 (1,315)
query : 1 - 1,315 (1,315/1,333)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 4, mito 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027323)
HIX0027323
HIT000452253
(
DQ585722
)
(Non-protein coding transcript.)
genome : 45,126,517 - 45,126,546 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027323)
HIX0027323
HIT000444010_11
(
DQ577479
)
(Non-protein coding transcript.)
genome : 45,126,960 - 45,126,989 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027323)
HIX0027323
HIT000438172_14
(
DQ571641
)
(Non-protein coding transcript.)
genome : 45,127,628 - 45,127,657 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027323)
HIX0027323
HIT000464261_16
(
DQ597730
)
(Non-protein coding transcript.)
genome : 45,127,729 - 45,127,759 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027323)
HIX0027323
HIT000455614_11
(
DQ589083
)
(Non-protein coding transcript.)
genome : 45,127,872 - 45,127,901 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027323)
HIX0013916
HIT000013781
(
AK057167
)
(Leucine-rich repeat-containing protein 37A precursor.)
genome : 45,128,660 - 45,131,432 (2,773)
query : 1 - 2,772 (2,772/2,772)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR029423 : LRRC37A/B like protein 1, C-terminal
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0039350
HIT000441233_06
(
DQ574702
)
Representative transcript
(Non-protein coding transcript.)
genome : 45,129,139 - 45,129,169 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039350)
HIX0039350
HIT000438326_06
(
DQ571795
)
(Non-protein coding transcript.)
genome : 45,129,146 - 45,129,175 (30)
query : 2 - 31 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039350)
HIX0224582
HIT000455893_04
(
DQ589362
)
Representative transcript
(Non-protein coding transcript.)
genome : 45,131,337 - 45,131,366 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224582)
HIX0224583
HIT000465362_05
(
DQ598831
)
Representative transcript
(Non-protein coding transcript.)
genome : 45,133,053 - 45,133,082 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224583)
HIX0039530
HIT000463501
(
DQ596970
)
Representative transcript
(Non-protein coding transcript.)
genome : 45,133,105 - 45,133,135 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039530)
HIX0194990
HIT000683276 (
ENST00000570379
)
(Conserved hypothetical protein.)
genome : 45,133,573 - 45,144,854 (11,282)
query : 1 - 622 (622/622)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194990)
HIX0194990
HIT000685825 (
ENST00000573341
)
(Hypothetical protein.)
genome : 45,133,975 - 45,177,614 (43,640)
query : 1 - 647 (647/647)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194990)
HIX0194990
pHIT000029566 ( pHIT000029566 )
Representative transcript
(Hypothetical protein.)
genome : 45,146,694 - 45,150,563 (3,870)
query : 1 - 462 (462/462)
3 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194990)
CAGE tag :
H21BB47O1003
HIX0194990
HIT000685415 (
ENST00000572864
)
(Non-protein coding transcript.)
genome : 45,148,812 - 45,177,315 (28,504)
query : 1 - 370 (370/370)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194990)
HIX0194990
HIT000688932 (
ENST00000576938
)
(Hypothetical short protein.)
genome : 45,148,840 - 45,177,307 (28,468)
query : 1 - 372 (372/372)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 12, cyto_nucl 3, nucl 2.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194990)
HIX0194990
HIT000687037 (
ENST00000574741
)
(Conserved hypothetical protein.)
genome : 45,159,286 - 45,177,605 (18,320)
query : 1 - 836 (836/836)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194990)
HIX0194990
HIT000684379 (
ENST00000571665
)
(Non-protein coding transcript.)
genome : 45,177,202 - 45,177,689 (488)
query : 1 - 255 (255/255)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194990)
HIX0013917
HIT000102380 (
ENST00000066544
)
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,195,069 - 45,266,632 (71,564)
query : 1 - 5,801 (5,801/5,801)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 16, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0013917
HIT000198251 (
NM_001256
)
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,195,310 - 45,266,665 (71,356)
query : 1 - 5,593 (5,593/5,593)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 16, cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0013917
HIT000485938 (
NM_001114091
)
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,195,310 - 45,266,665 (71,356)
query : 1 - 5,611 (5,611/5,611)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0013917
HIT000035355
(
BC011656
)
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,197,626 - 45,266,542 (68,917)
query : 1 - 3,172 (3,172/3,300)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001440 : Tetratricopeptide TPR1
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0013917
HIT000216784
(
S78234
)
Representative transcript
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,197,569 - 45,266,632 (69,064)
query : 7 - 3,306 (3,300/3,320)
19 exons
identity = 0.996
3'(0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.959)5'
coverage = 0.994
InterPro :
IPR001440 : Tetratricopeptide TPR1
IPR013026 : Tetratricopeptide repeat-containing domain
IPR013105 : Tetratricopeptide TPR2
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 16, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168940
Gallus
sp. (Chicken) : AJ720193
Mus
sp. (Mouse) : AK148278
Danio
sp. (Zebrafish) : BC049466
Rattus
sp. (Rat) : BC097475
Bos
sp. (Cow) : BC153259
Pongo
sp. (Orangutan) : ENSPPYT00000010440
Takifugu
sp. (Fugu) : SINFRUT00000160538
Pan
sp. (Chimpanzee) : XM_001173731
Monodelphis
sp. (Opossum) : XM_001376231
Equus
sp. (Horse) : XM_001501543
Canis
sp. (Dog) : XM_844801
Pan
sp. (Chimpanzee) : XR_019821
HIX0013917
HIT000630340 (
ENST00000531206
)
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,197,621 - 45,266,542 (68,922)
query : 1 - 3,177 (3,177/3,177)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0013917
HIT000683585 (
ENST00000570740
)
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,197,976 - 45,199,987 (2,012)
query : 9 - 594 (586/594)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.987
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, mito 11, cyto_nucl 9, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0013917
HIT000491505
(
AK296881
)
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,198,137 - 45,266,617 (68,481)
query : 2 - 2,571 (2,570/2,571)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.995;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001440 : Tetratricopeptide TPR1
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, mito 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0013917
HIT000544299 (
ENST00000446365
)
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,198,137 - 45,266,617 (68,481)
query : 1 - 2,570 (2,570/2,570)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0013917
HIT000632496 (
ENST00000533415
)
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,198,137 - 45,266,617 (68,481)
query : 1 - 2,570 (2,570/2,570)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0013917
HIT000684358 (
ENST00000571643
)
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,198,176 - 45,214,610 (16,435)
query : 1 - 716 (716/716)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 17, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0013917
HIT000217266
(
U00001
)
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,198,246 - 45,266,590 (68,345)
query : 7 - 2,585 (2,579/2,592)
19 exons
identity = 0.999
3'(1.000;1.000;1.000;0.984;1.000;1.000;1.000;
1.000;1.000;0.990;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.995
InterPro :
IPR001440 : Tetratricopeptide TPR1
IPR013026 : Tetratricopeptide repeat-containing domain
IPR013105 : Tetratricopeptide TPR2
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 16, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0013917
HIT000626745 (
ENST00000527547
)
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,198,246 - 45,266,590 (68,345)
query : 1 - 2,579 (2,579/2,579)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 16, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0013917
HIT000493966
(
AK299342
)
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,199,918 - 45,266,630 (66,713)
query : 1 - 1,420 (1,420/1,420)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.995;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013105 : Tetratricopeptide TPR2
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13, cyto 7.5, extr 4, mito 2,
lyso 2, extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0013917
HIT000626074 (
ENST00000526866
)
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,199,918 - 45,266,630 (66,713)
query : 1 - 1,420 (1,420/1,420)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13, cyto 7.5, extr 4, mito 2,
lyso 2, extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0027244
HIT000045991
(
AK126118
)
Representative transcript
(Conserved hypothetical protein.)
genome : 45,212,171 - 45,214,095 (1,925)
query : 1 - 1,887 (1,887/1,887)
2 exons
identity = 0.991
3'(0.997;0.983)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, plas 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027244)
HIX0013917
HIT000685968 (
ENST00000573502
)
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,214,518 - 45,219,747 (5,230)
query : 1 - 888 (888/888)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 12.5, cyto 12, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0013917
HIT000624728 (
ENST00000525495
)
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,219,210 - 45,266,627 (47,418)
query : 1 - 1,459 (1,459/1,459)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14.5, cyto 7.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0013917
HIT000686664 (
ENST00000574304
)
(Cell division cycle protein 27 homolog;)
genome : 45,221,248 - 45,247,343 (26,096)
query : 1 - 506 (506/514)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.984
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0013917
HIT000687971 (
ENST00000575830
)
(Cell division cycle protein 27 homolog isoform 1.)
genome : 45,221,248 - 45,232,877 (11,630)
query : 1 - 396 (396/396)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 14, cyto_nucl 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0013917
HIT000688541 (
ENST00000576484
)
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,229,180 - 45,234,633 (5,454)
query : 1 - 548 (548/548)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 15.5, nucl 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0013917
HIT000686009_02 (
ENST00000573550
)
(Hypothetical protein.)
genome : 45,232,064 - 45,258,971 (26,908)
query : 1 - 583 (583/583)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, cyto 10, extr_plas 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0013917
HIT000683658_02 (
ENST00000570818
)
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,232,121 - 45,249,413 (17,293)
query : 1 - 656 (656/656)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 7, cyto 2, golg 2, cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0013917
HIT000687678_02 (
ENST00000575483
)
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,234,279 - 45,266,618 (32,340)
query : 1 - 781 (781/781)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, extr 10, cyto_nucl 10, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0013917
HIT000631982_02 (
ENST00000532893
)
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,234,421 - 45,266,627 (32,207)
query : 1 - 515 (515/515)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 12, nucl 6.5, extr 6, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0013917
HIT000627920 (
ENST00000528748
)
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,234,426 - 45,266,302 (31,877)
query : 1 - 859 (859/859)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, mito_pero 4, E.R._mito 3.66667, cyto 3,
pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0013917
HIT000631674 (
ENST00000532575
)
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,234,596 - 45,266,788 (32,193)
query : 1 - 765 (765/765)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 10, cyto 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0013917
HIT000393246
(
DQ786193
)
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,234,666 - 45,266,570 (31,905)
query : 25 - 612 (588/620)
6 exons
identity = 0.992
3'(1.000;1.000;1.000;1.000;0.987;0.932)5'
coverage = 0.948
InterPro :
IPR001440 : Tetratricopeptide TPR1
IPR011990 : Tetratricopeptide-like helical domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 7, mito 6, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0202579
HIT000050201
(
AK130930
)
Representative transcript
(40S ribosomal protein S2; 40S ribosomal protein S4; Protein LLRep3;)
genome : 45,236,004 - 45,237,374 (1,371)
query : 1 - 1,371 (1,371/1,371)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR000851 : Ribosomal protein S5
IPR013810 : Ribosomal protein S5, N-terminal
IPR014720 : Double-stranded RNA-binding domain
GO :
0003723 : Molecular Function : RNA binding
0003735 : Molecular Function : structural constituent of ribosome
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, extr 12, cyto_nucl 8, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202579)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : XR_010789
Pan
sp. (Chimpanzee) : XR_022463
HIX0202579
HIT000592526 (
ENST00000488906
)
(40S ribosomal protein S2; 40S ribosomal protein S4; Protein LLRep3;)
genome : 45,236,557 - 45,237,359 (803)
query : 1 - 803 (803/803)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, extr 12, cyto_nucl 8, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202579)
HIX0224691
HIT000686411 (
ENST00000574021
)
(Hypothetical short protein.)
genome : 45,238,441 - 45,239,430 (990)
query : 1 - 401 (401/401)
2 exons
identity = 0.990
3'(1.000;0.989)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 11, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224691)
HIX0096708
HIT000390659
(
BC131757
)
Representative transcript
(Conserved hypothetical protein.)
genome : 45,245,203 - 45,245,869 (667)
query : 3 - 671 (669/677)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 0.988
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, cyto_nucl 7.83333, nucl 6.5, cyto 6,
cyto_pero 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096708)
HIX0013917
HIT000684841 (
ENST00000572193
)
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,247,192 - 45,248,415 (1,224)
query : 1 - 673 (673/673)
2 exons
identity = 0.994
3'(0.998;0.967)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 11.5, extr 10, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0013917
HIT000627335 (
ENST00000528147
)
(Cell division cycle protein 27 homolog; Anaphase-promoting complex subunit 3; APC3; CDC27 homolog; CDC27Hs; H-NUC;)
genome : 45,258,648 - 45,266,618 (7,971)
query : 1 - 463 (463/463)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013917)
HIX0202635
pHIT000029568 ( pHIT000029568 )
Representative transcript
(Hypothetical protein.)
genome : 45,266,646 - 45,266,993 (348)
query : 1 - 348 (348/348)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202635)
CAGE tag :
H08BA11C2104
HIX0013918
HIT000684659 (
ENST00000571981
)
(Myosin light polypeptide 6; 17 kDa myosin light chain; LC17; Myosin light chain 3; MLC-3; Myosin light chain alkali 3; Myosin light chain A3; Smooth muscle and nonmuscle myosin light chain alkali 6;)
genome : 45,277,812 - 45,301,038 (23,227)
query : 1 - 920 (920/920)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 12.5, extr 5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013918)
HIX0013918
HIT000684953 (
ENST00000572316
)
(Myosin light chain 4; Myosin light chain 1, embryonic muscle/atrial isoform; Myosin light chain alkali GT-1 isoform;)
genome : 45,286,401 - 45,301,024 (14,624)
query : 1 - 850 (850/850)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11, mito 7, extr 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013918)
HIX0013918
HIT000315662 (
NM_001002841
)
(Myosin light chain 4; Myosin light chain 1, embryonic muscle/atrial isoform; Myosin light chain alkali GT-1 isoform;)
genome : 45,286,428 - 45,301,045 (14,618)
query : 1 - 908 (908/934)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11, mito 7, extr 4, mito_pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013918)
HIX0013918
HIT000309183 (
ENST00000354968
)
(Myosin light chain 4; Myosin light chain 1, embryonic muscle/atrial isoform; Myosin light chain alkali GT-1 isoform;)
genome : 45,286,428 - 45,301,044 (14,617)
query : 1 - 907 (907/907)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11, mito 7, extr 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013918)
HIX0013918
HIT000683613 (
ENST00000570772
)
(Myosin light polypeptide 6; 17 kDa myosin light chain; LC17; Myosin light chain 3; MLC-3; Myosin light chain alkali 3; Myosin light chain A3; Smooth muscle and nonmuscle myosin light chain alkali 6;)
genome : 45,286,429 - 45,299,217 (12,789)
query : 1 - 582 (582/582)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 13, extr 5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013918)
HIX0013918
HIT000635668 (
ENST00000536623
)
(Myosin light chain 4; Myosin light chain 1, embryonic muscle/atrial isoform; Myosin light chain alkali GT-1 isoform;)
genome : 45,286,432 - 45,300,404 (13,973)
query : 1 - 650 (650/650)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11, mito 7, extr 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013918)
HIX0013918
HIT000688877 (
ENST00000576874
)
(Myosin light chain 4; Myosin light chain 1, embryonic muscle/atrial isoform; Myosin light chain alkali GT-1 isoform;)
genome : 45,286,432 - 45,299,775 (13,344)
query : 1 - 641 (641/641)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 11.5, mito 7, extr 5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013918)
HIX0013918
HIT000686177 (
ENST00000573747
)
(Myosin light chain 4; Myosin light chain 1, embryonic muscle/atrial isoform; Myosin light chain alkali GT-1 isoform;)
genome : 45,286,708 - 45,300,437 (13,730)
query : 1 - 654 (654/654)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 11, mito 7, extr 5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013918)
HIX0013918
HIT000199369 (
NM_002476
)
(Myosin light chain 4; Myosin light chain 1, embryonic muscle/atrial isoform; Myosin light chain alkali GT-1 isoform;)
genome : 45,286,714 - 45,301,045 (14,332)
query : 1 - 855 (855/855)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11, mito 7, extr 4, mito_pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013918)
HIX0013918
HIT000476900 (
ENST00000393450
)
(Myosin light chain 4; Myosin light chain 1, embryonic muscle/atrial isoform; Myosin light chain alkali GT-1 isoform;)
genome : 45,286,714 - 45,301,045 (14,332)
query : 1 - 855 (855/855)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11, mito 7, extr 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013918)
HIX0013918
HIT000040987
(
BC030228
)
Representative transcript
(Myosin light chain 4; Myosin light chain 1, embryonic muscle/atrial isoform; Myosin light chain alkali GT-1 isoform;)
genome : 45,286,725 - 45,301,045 (14,321)
query : 1 - 844 (844/870)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11, mito 7, extr 4, mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013918)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC048485
Danio
sp. (Zebrafish) : BC083444
Bos
sp. (Cow) : BC114816
Tetraodon
sp. (Tetraodon) : CR694410
Danio
sp. (Zebrafish) : ENSDART00000061955
Equus
sp. (Horse) : ENSECAT00000022483
Monodelphis
sp. (Opossum) : ENSMODT00000013881
Oryzias
sp. (Medaka) : ENSORLT00000020005
Pongo
sp. (Orangutan) : ENSPPYT00000010442
Pan
sp. (Chimpanzee) : ENSPTRT00000042631
Gallus
sp. (Chicken) : J02823
Takifugu
sp. (Fugu) : SINFRUT00000134516
Takifugu
sp. (Fugu) : SINFRUT00000172451
Macaca
sp. (Macaque) : XM_001116001
HIX0013918
HIT000194916
(
M24121
)
(EF-hand domain pair containing protein.)
genome : 45,286,735 - 45,301,010 (14,276)
query : 6 - 809 (804/828)
7 exons
identity = 0.986
5'(0.984;0.964;0.993;0.989;0.987;1.000;0.978)3'
coverage = 0.971
InterPro :
IPR011992 : EF-hand domain pair
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11, mito 7, extr 4, mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013918)
HIX0013918
HIT000195665
(
M36172
)
(Myosin light chain 4; Myosin light chain 1, embryonic muscle/atrial isoform; Myosin light chain alkali GT-1 isoform;)
genome : 45,286,735 - 45,301,045 (14,311)
query : 3 - 836 (834/836)
7 exons
identity = 0.999
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11, mito 7, extr 4, mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013918)
HIX0013918
HIT000321404
(
X13955
)
(Myosin light chain 4; Myosin light chain 1, embryonic muscle/atrial isoform; Myosin light chain alkali GT-1 isoform;)
genome : 45,286,735 - 45,301,045 (14,311)
query : 3 - 836 (834/836)
7 exons
identity = 0.999
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11, mito 7, extr 4, mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013918)
HIX0013918
HIT000684942 (
ENST00000572303
)
(Myosin light chain 4; Myosin light chain 1, embryonic muscle/atrial isoform; Myosin light chain alkali GT-1 isoform;)
genome : 45,286,766 - 45,299,162 (12,397)
query : 1 - 544 (544/544)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 11.5, mito 10, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013918)
HIX0013918
HIT000683524 (
ENST00000570671
)
(Myosin light chain 4; Myosin light chain 1, embryonic muscle/atrial isoform; Myosin light chain alkali GT-1 isoform;)
genome : 45,299,040 - 45,300,843 (1,804)
query : 17 - 740 (724/740)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.978
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013918)
HIX0013918
HIT000194738
(
M20641
)
(Myosin light chain 4; Myosin light chain 1, embryonic muscle/atrial isoform; Myosin light chain alkali GT-1 isoform;)
genome : 45,299,044 - 45,301,045 (2,002)
query : 1 - 470 (470/470)
4 exons
identity = 0.987
5'(0.989;0.962;1.000;0.994)3'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16.5, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013918)
HIX0224269
HIT000389295
(
BC127667
)
(Integrin beta-3; Platelet membrane glycoprotein IIIa; GPIIIa; AltName: CD_antigen=CD61; Precursor;)
genome : 45,331,208 - 45,387,816 (56,609)
query : 5 - 2,637 (2,633/2,637)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;0.993;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 0.998
InterPro :
IPR002035 : von Willebrand factor, type A
IPR002369 : Integrin beta subunit, N-terminal
IPR012896 : Integrin beta subunit, tail
IPR014836 : Integrin beta subunit, cytoplasmic domain
IPR015812 : Integrin beta subunit
IPR016201 : Plexin-like fold
IPR027068 : Integrin beta-3 subunit
GO :
0004872 : Molecular Function : receptor activity
0007044 : Biological Process : cell-substrate junction assembly
0007155 : Biological Process : cell adhesion
0007160 : Biological Process : cell-matrix adhesion
0007229 : Biological Process : integrin-mediated signaling pathway
0007275 : Biological Process : multicellular organismal development
0008305 : Cellular Component : integrin complex
0016020 : Cellular Component : membrane
0030334 : Biological Process : regulation of cell migration
0060055 : Biological Process : angiogenesis involved in wound healing
0070527 : Biological Process : platelet aggregation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, extr_plas 13.5, extr 9, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224269)
HIX0224269
HIT000197260 (
NM_000212
)
(Integrin beta-3; Platelet membrane glycoprotein IIIa; GPIIIa; AltName: CD_antigen=CD61; Precursor;)
genome : 45,331,208 - 45,390,077 (58,870)
query : 1 - 4,894 (4,894/4,894)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, extr_plas 13.5, extr 9, pero 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224269)
HIX0224269
HIT000191082
(
J02703
)
(Integrin beta-3; Platelet membrane glycoprotein IIIa; GPIIIa; AltName: CD_antigen=CD61; Precursor;)
genome : 45,331,208 - 45,388,352 (57,145)
query : 1 - 3,169 (3,169/3,170)
15 exons
identity = 0.997
5'(0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;0.995;1.000;0.980;1.000;1.000;
0.996)3'
coverage = 1.000
InterPro :
IPR002035 : von Willebrand factor, type A
IPR002369 : Integrin beta subunit, N-terminal
IPR012896 : Integrin beta subunit, tail
IPR014836 : Integrin beta subunit, cytoplasmic domain
IPR015812 : Integrin beta subunit
IPR016201 : Plexin-like fold
IPR027068 : Integrin beta-3 subunit
GO :
0004872 : Molecular Function : receptor activity
0007044 : Biological Process : cell-substrate junction assembly
0007155 : Biological Process : cell adhesion
0007160 : Biological Process : cell-matrix adhesion
0007229 : Biological Process : integrin-mediated signaling pathway
0007275 : Biological Process : multicellular organismal development
0008305 : Cellular Component : integrin complex
0016020 : Cellular Component : membrane
0030334 : Biological Process : regulation of cell migration
0060055 : Biological Process : angiogenesis involved in wound healing
0070527 : Biological Process : platelet aggregation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 15, extr_plas 13.5, extr 10, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224269)
HIX0224269
HIT000389294
(
BC127666
)
Representative transcript
(Integrin beta-3; Platelet membrane glycoprotein IIIa; GPIIIa; AltName: CD_antigen=CD61; Precursor;)
genome : 45,331,208 - 45,387,816 (56,609)
query : 1 - 2,633 (2,633/2,633)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR002035 : von Willebrand factor, type A
IPR002369 : Integrin beta subunit, N-terminal
IPR012896 : Integrin beta subunit, tail
IPR014836 : Integrin beta subunit, cytoplasmic domain
IPR015812 : Integrin beta subunit
IPR016201 : Plexin-like fold
IPR027068 : Integrin beta-3 subunit
GO :
0004872 : Molecular Function : receptor activity
0007044 : Biological Process : cell-substrate junction assembly
0007155 : Biological Process : cell adhesion
0007160 : Biological Process : cell-matrix adhesion
0007229 : Biological Process : integrin-mediated signaling pathway
0007275 : Biological Process : multicellular organismal development
0008305 : Cellular Component : integrin complex
0016020 : Cellular Component : membrane
0030334 : Biological Process : regulation of cell migration
0060055 : Biological Process : angiogenesis involved in wound healing
0070527 : Biological Process : platelet aggregation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, extr_plas 13.5, extr 9, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224269)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF026509
Canis
sp. (Dog) : AF170525
Equus
sp. (Horse) : AY999064
Danio
sp. (Zebrafish) : DQ178646
Danio
sp. (Zebrafish) : DQ178647
Monodelphis
sp. (Opossum) : ENSMODT00000013864
Oryzias
sp. (Medaka) : ENSORLT00000004216
Oryzias
sp. (Medaka) : ENSORLT00000005904
Pongo
sp. (Orangutan) : ENSPPYT00000010443
Tetraodon
sp. (Tetraodon) : GSTENT00021802001
Takifugu
sp. (Fugu) : SINFRUT00000158115
Takifugu
sp. (Fugu) : SINFRUT00000161806
Gallus
sp. (Chicken) : X72378
Macaca
sp. (Macaque) : XM_001116010
Pan
sp. (Chimpanzee) : XM_001173647
HIX0224269
HIT000722480
(
KC120777
)
(Integrin beta-3; Platelet membrane glycoprotein IIIa; GPIIIa; AltName: CD_antigen=CD61; Precursor;)
genome : 45,331,208 - 45,387,714 (56,507)
query : 1 - 2,532 (2,532/2,532)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR002035 : von Willebrand factor, type A
IPR002369 : Integrin beta subunit, N-terminal
IPR012896 : Integrin beta subunit, tail
IPR014836 : Integrin beta subunit, cytoplasmic domain
IPR015812 : Integrin beta subunit
IPR016201 : Plexin-like fold
IPR027068 : Integrin beta-3 subunit
GO :
0004872 : Molecular Function : receptor activity
0007044 : Biological Process : cell-substrate junction assembly
0007155 : Biological Process : cell adhesion
0007160 : Biological Process : cell-matrix adhesion
0007229 : Biological Process : integrin-mediated signaling pathway
0007275 : Biological Process : multicellular organismal development
0008305 : Cellular Component : integrin complex
0016020 : Cellular Component : membrane
0030334 : Biological Process : regulation of cell migration
0060055 : Biological Process : angiogenesis involved in wound healing
0070527 : Biological Process : platelet aggregation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, extr_plas 13.5, extr 9, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224269)
HIX0224269
HIT000722481
(
KC120778
)
(Integrin beta-3; Platelet membrane glycoprotein IIIa; GPIIIa; AltName: CD_antigen=CD61; Precursor;)
genome : 45,331,208 - 45,387,714 (56,507)
query : 1 - 2,531 (2,531/2,531)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;0.996;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR002035 : von Willebrand factor, type A
IPR002369 : Integrin beta subunit, N-terminal
IPR012896 : Integrin beta subunit, tail
IPR014836 : Integrin beta subunit, cytoplasmic domain
IPR015812 : Integrin beta subunit
IPR016201 : Plexin-like fold
IPR027068 : Integrin beta-3 subunit
GO :
0004872 : Molecular Function : receptor activity
0007044 : Biological Process : cell-substrate junction assembly
0007155 : Biological Process : cell adhesion
0007160 : Biological Process : cell-matrix adhesion
0007229 : Biological Process : integrin-mediated signaling pathway
0007275 : Biological Process : multicellular organismal development
0008305 : Cellular Component : integrin complex
0016020 : Cellular Component : membrane
0030334 : Biological Process : regulation of cell migration
0060055 : Biological Process : angiogenesis involved in wound healing
0070527 : Biological Process : platelet aggregation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, extr_plas 13.5, extr 9, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224269)
HIX0224269
HIT000195657
(
M35999
)
(Integrin beta-3; Platelet membrane glycoprotein IIIa; GPIIIa; AltName: CD_antigen=CD61; Precursor;)
genome : 45,331,210 - 45,389,677 (58,468)
query : 1 - 4,487 (4,487/4,487)
15 exons
identity = 0.994
5'(0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;0.998;1.000;1.000;1.000;1.000;
0.989)3'
coverage = 1.000
InterPro :
IPR002035 : von Willebrand factor, type A
IPR002369 : Integrin beta subunit, N-terminal
IPR012896 : Integrin beta subunit, tail
IPR014836 : Integrin beta subunit, cytoplasmic domain
IPR015812 : Integrin beta subunit
IPR016201 : Plexin-like fold
IPR027068 : Integrin beta-3 subunit
GO :
0004872 : Molecular Function : receptor activity
0007044 : Biological Process : cell-substrate junction assembly
0007155 : Biological Process : cell adhesion
0007160 : Biological Process : cell-matrix adhesion
0007229 : Biological Process : integrin-mediated signaling pathway
0007275 : Biological Process : multicellular organismal development
0008305 : Cellular Component : integrin complex
0016020 : Cellular Component : membrane
0030334 : Biological Process : regulation of cell migration
0060055 : Biological Process : angiogenesis involved in wound healing
0070527 : Biological Process : platelet aggregation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 15, extr_plas 13.5, extr 10, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224269)
HIX0224269
HIT000194721
(
M20311
)
(Integrin beta-3; Platelet membrane glycoprotein IIIa; GPIIIa; AltName: CD_antigen=CD61; Precursor;)
genome : 45,331,212 - 45,389,182 (57,971)
query : 1 - 3,996 (3,996/3,997)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.980;1.000;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR002035 : von Willebrand factor, type A
IPR002369 : Integrin beta subunit, N-terminal
IPR012896 : Integrin beta subunit, tail
IPR014836 : Integrin beta subunit, cytoplasmic domain
IPR015812 : Integrin beta subunit
IPR016201 : Plexin-like fold
IPR027068 : Integrin beta-3 subunit
GO :
0004872 : Molecular Function : receptor activity
0007044 : Biological Process : cell-substrate junction assembly
0007155 : Biological Process : cell adhesion
0007160 : Biological Process : cell-matrix adhesion
0007229 : Biological Process : integrin-mediated signaling pathway
0007275 : Biological Process : multicellular organismal development
0008305 : Cellular Component : integrin complex
0016020 : Cellular Component : membrane
0030334 : Biological Process : regulation of cell migration
0060055 : Biological Process : angiogenesis involved in wound healing
0070527 : Biological Process : platelet aggregation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, extr_plas 13.5, extr 9, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224269)
HIX0224269
HIT000672753 (
ENST00000559488
)
(Integrin beta-3; Platelet membrane glycoprotein IIIa; GPIIIa; AltName: CD_antigen=CD61; Precursor;)
genome : 45,331,212 - 45,389,182 (57,971)
query : 1 - 3,995 (3,995/3,995)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, extr_plas 13.5, extr 9, pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224269)
HIX0224269
HIT000684393 (
ENST00000571680
)
(Integrin beta-3; Platelet membrane glycoprotein IIIa; GPIIIa; AltName: CD_antigen=CD61; Precursor;)
genome : 45,331,219 - 45,368,853 (37,635)
query : 1 - 1,668 (1,668/1,668)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, lyso 7, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224269)
HIX0224269
HIT000332392
(
AY826979
)
(Integrin beta-3; Platelet membrane glycoprotein IIIa; GPIIIa; AltName: CD_antigen=CD61; Precursor;)
genome : 45,331,219 - 45,368,565 (37,347)
query : 1 - 1,381 (1,381/1,381)
9 exons
identity = 0.999
5'(1.000;1.000;0.995;1.000;1.000;1.000;1.000;
1.000;0.996)3'
coverage = 1.000
InterPro :
IPR002035 : von Willebrand factor, type A
IPR002369 : Integrin beta subunit, N-terminal
IPR015812 : Integrin beta subunit
IPR016201 : Plexin-like fold
IPR027068 : Integrin beta-3 subunit
GO :
0004872 : Molecular Function : receptor activity
0007044 : Biological Process : cell-substrate junction assembly
0007155 : Biological Process : cell adhesion
0007160 : Biological Process : cell-matrix adhesion
0007229 : Biological Process : integrin-mediated signaling pathway
0007275 : Biological Process : multicellular organismal development
0008305 : Cellular Component : integrin complex
0016020 : Cellular Component : membrane
0030334 : Biological Process : regulation of cell migration
0060055 : Biological Process : angiogenesis involved in wound healing
0070527 : Biological Process : platelet aggregation
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, lyso 7, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224269)
HIX0224269
HIT000222758
(
U95204
)
(Integrin beta-3; Platelet membrane glycoprotein IIIa; GPIIIa; AltName: CD_antigen=CD61; Precursor;)
genome : 45,331,228 - 45,400,513 (69,286)
query : 1 - 2,990 (2,990/3,007)
15 exons
identity = 0.991
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.980;1.000;1.000;
0.964)3'
coverage = 0.999
InterPro :
IPR002035 : von Willebrand factor, type A
IPR002369 : Integrin beta subunit, N-terminal
IPR012896 : Integrin beta subunit, tail
IPR014836 : Integrin beta subunit, cytoplasmic domain
IPR015812 : Integrin beta subunit
IPR016201 : Plexin-like fold
IPR027068 : Integrin beta-3 subunit
GO :
0004872 : Molecular Function : receptor activity
0007044 : Biological Process : cell-substrate junction assembly
0007155 : Biological Process : cell adhesion
0007160 : Biological Process : cell-matrix adhesion
0007229 : Biological Process : integrin-mediated signaling pathway
0007275 : Biological Process : multicellular organismal development
0008305 : Cellular Component : integrin complex
0016020 : Cellular Component : membrane
0030334 : Biological Process : regulation of cell migration
0060055 : Biological Process : angiogenesis involved in wound healing
0070527 : Biological Process : platelet aggregation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, extr_plas 13.5, extr 9, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224269)
HIX0224269
HIT000216371
(
S70348
)
(Conserved hypothetical protein.)
genome : 45,368,419 - 45,369,537 (1,119)
query : 1 - 409 (409/409)
2 exons
identity = 0.993
5'(0.992;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224269)
HIX0224269
HIT000685857 (
ENST00000573377
)
(Conserved hypothetical protein.)
genome : 45,368,419 - 45,369,537 (1,119)
query : 1 - 408 (408/408)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224269)
HIX0013919
HIT000688417 (
ENST00000576345
)
(Hypothetical short protein.)
genome : 45,380,832 - 45,383,051 (2,220)
query : 1 - 481 (481/481)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013919)
HIX0013919
HIT000687294 (
ENST00000575039
)
(Hypothetical short protein.)
genome : 45,380,840 - 45,400,979 (20,140)
query : 1 - 535 (535/535)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013919)
HIX0224269
HIT000194976
(
M25108
)
(Integrin beta-3; Platelet membrane glycoprotein IIIa; GPIIIa; AltName: CD_antigen=CD61; Precursor;)
genome : 45,384,834 - 45,385,577 (744)
query : 14 - 757 (744/757)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.983
InterPro :
IPR014836 : Integrin beta subunit, cytoplasmic domain
IPR015812 : Integrin beta subunit
IPR027068 : Integrin beta-3 subunit
GO :
0004872 : Molecular Function : receptor activity
0007044 : Biological Process : cell-substrate junction assembly
0007155 : Biological Process : cell adhesion
0007160 : Biological Process : cell-matrix adhesion
0007229 : Biological Process : integrin-mediated signaling pathway
0008305 : Cellular Component : integrin complex
0030334 : Biological Process : regulation of cell migration
0060055 : Biological Process : angiogenesis involved in wound healing
0070527 : Biological Process : platelet aggregation
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224269)
HIX0039296
HIT000066799
(
AF085920
)
Representative transcript
(Conserved hypothetical protein.)
genome : 45,392,632 - 45,393,133 (502)
query : 1 - 500 (500/500)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 8.5, cyto_nucl 7.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039296)
HIX0013919
HIT000018296
(
AK093429
)
Representative transcript
(Hypothetical protein.)
genome : 45,400,564 - 45,402,367 (1,804)
query : 1 - 1,686 (1,686/1,686)
2 exons
identity = 0.995
3'(0.998;0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11.5, mito 7, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013919)
HIX0039255
HIT000617556 (
ENST00000518170
)
(Conserved hypothetical protein.)
genome : 45,400,656 - 45,405,737 (5,082)
query : 1 - 355 (355/355)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039255)
HIX0039255
HIT000622567 (
ENST00000523285
)
(Conserved hypothetical protein.)
genome : 45,400,894 - 45,412,642 (11,749)
query : 1 - 573 (573/573)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039255)
HIX0039255
HIT000097879
(
BC044604
)
(Conserved hypothetical protein.)
genome : 45,401,142 - 45,452,002 (50,861)
query : 1 - 1,474 (1,474/1,488)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000;1.000;0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 10, mito_nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039255)
HIX0039255
HIT000616712 (
ENST00000517310
)
(Conserved hypothetical protein.)
genome : 45,401,142 - 45,452,005 (50,864)
query : 1 - 1,477 (1,477/1,477)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, cyto 12.5, extr 2, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039255)
HIX0039255
HIT000213618 (
NM_152347
)
(EF-hand domain pair containing protein.)
genome : 45,401,327 - 45,518,676 (117,350)
query : 1 - 3,949 (3,949/3,964)
25 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 16.5, cyto 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039255)
HIX0039255
HIT000655994 (
NM_001195192
)
(EF-hand domain pair containing protein.)
genome : 45,401,327 - 45,508,076 (106,750)
query : 1 - 3,530 (3,530/3,544)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039255)
HIX0039255
HIT000620128 (
ENST00000520802
)
(Conserved hypothetical protein.)
genome : 45,401,327 - 45,419,393 (18,067)
query : 1 - 568 (568/568)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039255)
HIX0039255
HIT000051693
(
BC036407
)
Representative transcript
(EF-hand calcium-binding domain-containing protein 13;)
genome : 45,401,347 - 45,518,676 (117,330)
query : 1 - 3,929 (3,929/3,944)
25 exons
identity = 0.999
5'(0.989;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011992 : EF-hand domain pair
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 16.5, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039255)
HIX0039255
HIT000127263 (
ENST00000331493
)
(EF-hand domain pair containing protein.)
genome : 45,401,347 - 45,518,678 (117,332)
query : 1 - 3,931 (3,931/3,931)
25 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 16.5, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039255)
HIX0039255
HIT000094998
(
BC037876
)
(EF-hand calcium-binding domain-containing protein 13 isoform B.)
genome : 45,401,391 - 45,508,076 (106,686)
query : 6 - 3,472 (3,467/3,486)
22 exons
identity = 0.998
5'(0.960;1.000;1.000;0.991;1.000;1.000;1.000;
1.000;1.000;0.996;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 0.999
InterPro :
IPR011992 : EF-hand domain pair
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039255)
HIX0039255
HIT000616881 (
ENST00000517484
)
(EF-hand domain pair containing protein.)
genome : 45,401,391 - 45,508,076 (106,686)
query : 1 - 3,466 (3,466/3,466)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039255)
HIX0039255
HIT000619121 (
ENST00000519772
)
(Conserved hypothetical protein.)
genome : 45,401,391 - 45,412,692 (11,302)
query : 1 - 553 (553/553)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, extr 13, cyto_nucl 8, mito 2, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039255)
HIX0039255
HIT000054304
(
BX537519
)
(EF-hand calcium-binding domain-containing protein 13 isoform B.)
genome : 45,403,590 - 45,426,636 (23,047)
query : 4 - 5,633 (5,630/5,650)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.997)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, extr 10, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039255)
HIX0039255
HIT000022515
(
AK097661
)
(EF-hand domain pair containing protein.)
genome : 45,403,705 - 45,473,387 (69,683)
query : 1 - 1,978 (1,978/1,978)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.993;0.987;1.000)3'
coverage = 1.000
InterPro :
IPR011992 : EF-hand domain pair
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039255)
HIX0039255
HIT000620103 (
ENST00000520776
)
(EF-hand domain pair containing protein.)
genome : 45,403,705 - 45,473,387 (69,683)
query : 1 - 1,979 (1,979/1,979)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039255)
HIX0039255
HIT000618019 (
ENST00000518646
)
(Conserved hypothetical protein.)
genome : 45,405,414 - 45,418,817 (13,404)
query : 1 - 558 (558/558)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11, mito 2, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039255)
HIX0039255
HIT000617467 (
ENST00000518081
)
(Conserved hypothetical protein.)
genome : 45,407,217 - 45,417,454 (10,238)
query : 1 - 449 (449/449)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11, extr 7, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039255)
HIX0039255
HIT000623245 (
ENST00000523978
)
(Conserved hypothetical protein.)
genome : 45,446,982 - 45,452,004 (5,023)
query : 1 - 548 (548/548)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11.5, nucl 7.5, mito 5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039255)
HIX0039255
HIT000621624 (
ENST00000522326
)
(EF-hand domain pair containing protein.)
genome : 45,455,020 - 45,471,465 (16,446)
query : 1 - 541 (541/541)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10, extr 7, mito 4, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039255)
HIX0039255
HIT000623111 (
ENST00000523842
)
(EF-hand domain pair containing protein.)
genome : 45,455,182 - 45,492,341 (37,160)
query : 1 - 651 (651/651)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, extr 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039255)
HIX0212575
HIT000622385 (
ENST00000523101
)
(Non-protein coding transcript.)
genome : 45,486,688 - 45,500,892 (14,205)
query : 1 - 513 (513/513)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212575)
HIX0039493
HIT000262726
(
BC067758
)
(39S ribosomal protein L45, mitochondrial; L45mt; MRP-L45; Precursor;)
genome : 45,527,593 - 45,569,847 (42,255)
query : 3 - 1,257 (1,255/1,274)
6 exons
identity = 0.994
3'(0.995;1.000;1.000;0.977;0.994;0.989)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, mito 7, extr 6, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039493)
HIX0039493
HIT000659091 (
NR_033934
)
(39S ribosomal protein L45, mitochondrial; L45mt; MRP-L45; Precursor;)
genome : 45,527,593 - 45,569,986 (42,394)
query : 1 - 1,396 (1,396/1,396)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, mito_nucl 12.3333, mito_pero 11.8333, extr 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039493)
HIX0039493
HIT000523093 (
ENST00000425159
)
(39S ribosomal protein L45, mitochondrial; L45mt; MRP-L45; Precursor;)
genome : 45,527,934 - 45,569,858 (41,925)
query : 1 - 927 (927/927)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, mito_pero 14, extr 2, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039493)
HIX0027291
HIT000048967
(
AK129696
)
Representative transcript
(Conserved hypothetical protein.)
genome : 45,530,225 - 45,531,868 (1,644)
query : 1 - 1,642 (1,642/1,642)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027291)
HIX0039493
HIT000334239
(
BC090855
)
Representative transcript
(39S ribosomal protein L45, mitochondrial; L45mt; MRP-L45; Precursor;)
genome : 45,532,475 - 45,569,836 (37,362)
query : 1 - 1,760 (1,760/1,785)
7 exons
identity = 0.994
3'(0.993;1.000;1.000;1.000;0.985;1.000;0.987)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, mito_nucl 15.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039493)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK081922
Bos
sp. (Cow) : BC102136
Gallus
sp. (Chicken) : BX931740
Equus
sp. (Horse) : ENSECAT00000000672
Pongo
sp. (Orangutan) : ENSPPYT00000010354
Rattus
sp. (Rat) : XM_001081368
Monodelphis
sp. (Opossum) : XM_001372079
Pan
sp. (Chimpanzee) : XR_022585
HIX0039493
HIT000687511 (
ENST00000575291
)
(39S ribosomal protein L45, mitochondrial; L45mt; MRP-L45; Precursor;)
genome : 45,532,474 - 45,569,836 (37,363)
query : 1 - 1,763 (1,763/1,763)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, mito_pero 14, extr 2, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039493)
HIX0039493
HIT000685269 (
ENST00000572695
)
(39S ribosomal protein L45, mitochondrial; L45mt; MRP-L45; Precursor;)
genome : 45,532,734 - 45,567,584 (34,851)
query : 1 - 804 (804/804)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 6, cyto_nucl 6, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039493)
HIX0039493
HIT000685805 (
ENST00000573318
)
(39S ribosomal protein L45, mitochondrial; L45mt; MRP-L45; Precursor;)
genome : 45,560,358 - 45,569,825 (9,468)
query : 1 - 473 (473/473)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, mito_pero 14, extr 2, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039493)
HIX0224355
HIT000624253 (
ENST00000525007
)
(Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase family protein.)
genome : 45,600,308 - 45,660,210 (59,903)
query : 1 - 649 (649/649)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, cyto 10, extr 9, nucl 8, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224355)
HIX0224355
HIT000627923 (
ENST00000528751
)
(Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase family protein.)
genome : 45,600,318 - 45,656,792 (56,475)
query : 1 - 558 (558/558)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, mito 6, nucl 2.5, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224355)
HIX0224355
HIT000625461 (
ENST00000526247
)
(Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase family protein.)
genome : 45,600,334 - 45,656,822 (56,489)
query : 1 - 648 (648/648)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 7.5, mito_pero 4.5, cyto_nucl 2,
nucl 1.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224355)
HIX0224355
HIT000631824 (
ENST00000532729
)
(Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase family protein.)
genome : 45,600,343 - 45,660,164 (59,822)
query : 1 - 711 (711/711)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 22, plas 3.5, extr_plas 3.5, extr 2.5, nucl 1,
cyto 1, E.R. 1, cyto_nucl 1, lyso 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224355)
HIX0224355
HIT000632651 (
ENST00000533573
)
(Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase family protein.)
genome : 45,608,582 - 45,654,502 (45,921)
query : 1 - 559 (559/559)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23, cyto 5, extr 1, nucl 1, pero 1, golg 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224355)
HIX0224355
HIT000633740 (
ENST00000534691
)
(Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase family protein.)
genome : 45,608,754 - 45,660,222 (51,469)
query : 1 - 546 (546/548)
6 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;0.933)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, nucl 2.5, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224355)
HIX0224355
HIT000627018 (
ENST00000527824
)
(Peptidase M1, membrane alanine aminopeptidase, N-terminal domain containing protein.)
genome : 45,646,795 - 45,663,309 (16,515)
query : 1 - 684 (684/684)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 12, cyto_nucl 10, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224355)
HIX0224355
HIT000633773 (
ENST00000534727
)
(Peptidase M1, membrane alanine aminopeptidase, N-terminal domain containing protein.)
genome : 45,660,164 - 45,663,331 (3,168)
query : 1 - 518 (518/518)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 12, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224355)
HIX0224356
HIT000624637 (
ENST00000525401
)
(Peptidase M1, membrane alanine aminopeptidase, N-terminal domain containing protein.)
genome : 45,663,514 - 45,664,027 (514)
query : 1 - 394 (394/394)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.5, mito 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224356)
HIX0224356
HIT000627156 (
ENST00000527964
)
(Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase family protein.)
genome : 45,663,657 - 45,669,911 (6,255)
query : 1 - 554 (554/554)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 17, cyto 8, cyto_nucl 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224356)
HIX0224356
HIT000626562 (
ENST00000527360
)
(Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase family protein.)
genome : 45,663,719 - 45,669,911 (6,193)
query : 1 - 534 (534/534)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.8333, cyto 12, cyto_pero 9, extr 7,
nucl 6.5, pero 3.5, extr_plas 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224356)
HIX0224356
HIT000632616 (
ENST00000533538
)
(Peptidase M1, membrane alanine aminopeptidase, N-terminal domain containing protein.)
genome : 45,663,889 - 45,670,039 (6,151)
query : 1 - 1,281 (1,281/1,281)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, cyto_nucl 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224356)
HIX0224356
HIT000624267 (
ENST00000525021
)
(Peptidase M1, membrane alanine aminopeptidase, N-terminal domain containing protein.)
genome : 45,664,489 - 45,670,041 (5,553)
query : 1 - 735 (735/735)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4.5, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224356)
HIX0224356
HIT000628757 (
ENST00000529602
)
(Conserved hypothetical protein.)
genome : 45,669,095 - 45,670,030 (936)
query : 1 - 512 (512/512)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 6, nucl 4.5, cyto 4.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224356)
HIX0224149
HIT000633853 (
ENST00000534807
)
(Conserved hypothetical protein.)
genome : 45,673,433 - 45,679,340 (5,908)
query : 1 - 827 (827/838)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 7, cyto_pero 7, cyto_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224149)
HIX0224149
HIT000624294 (
ENST00000525048
)
(ERAP1-like C-terminal domain containing protein.)
genome : 45,679,082 - 45,695,795 (16,714)
query : 1 - 534 (534/534)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 12, cyto 7, mito 6, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224149)
HIX0224149
HIT000021346
(
AK096491
)
Representative transcript
(Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase family protein.)
genome : 45,680,860 - 45,697,580 (16,721)
query : 1 - 2,291 (2,291/2,291)
6 exons
identity = 0.999
5'(1.000;1.000;0.993;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001930 : Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase
IPR024571 : ERAP1-like C-terminal domain
GO :
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11, mito 9, E.R._mito 6, nucl 4,
pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224149)
HIX0224149
HIT000630611 (
ENST00000531486
)
(Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase family protein.)
genome : 45,680,860 - 45,697,580 (16,721)
query : 1 - 2,290 (2,290/2,290)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11, mito 9, E.R._mito 6, nucl 4,
pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224149)
HIX0224450
HIT000694281 (
ENST00000582389
)
(Conserved hypothetical protein.)
genome : 45,681,226 - 45,713,968 (32,743)
query : 7 - 437 (431/437)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.986
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224450)
HIX0224450
HIT000693964 (
ENST00000582066
)
(Conserved hypothetical protein.)
genome : 45,681,230 - 45,713,916 (32,687)
query : 1 - 294 (294/294)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224450)
HIX0224149
HIT000627742 (
ENST00000528565
)
(Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase family protein.)
genome : 45,695,716 - 45,699,334 (3,619)
query : 1 - 558 (558/558)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 13.5, cyto_nucl 9.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224149)
HIX0224450
HIT000696261 (
ENST00000584391
)
(Non-protein coding transcript.)
genome : 45,699,208 - 45,726,786 (27,579)
query : 1 - 442 (442/442)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224450)
HIX0224450
HIT000691965 (
ENST00000580045
)
(Non-protein coding transcript.)
genome : 45,703,372 - 45,713,968 (10,597)
query : 21 - 733 (713/733)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.973
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224450)
HIX0013923
HIT000500034
(
AK316421
)
(Importin subunit beta-1 isoform 2.)
genome : 45,726,842 - 45,759,999 (33,158)
query : 1 - 3,164 (3,164/3,168)
21 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.991)3'
coverage = 0.999
InterPro :
IPR011989 : Armadillo-like helical
IPR021133 : HEAT, type 2
IPR027140 : Importin subunit beta-1
GO :
0006913 : Biological Process : nucleocytoplasmic transport
0008565 : Molecular Function : protein transporter activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cysk 7, nucl 5, mito 5, mito_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
HIX0013923
HIT000634503 (
ENST00000535458
)
(Importin subunit beta-1 isoform 2.)
genome : 45,726,842 - 45,759,999 (33,158)
query : 1 - 3,163 (3,163/3,163)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cysk 7, nucl 5, mito 5, mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
HIX0013923
HIT000695528 (
ENST00000583648
)
(Importin subunit beta-1; Importin-90; Karyopherin subunit beta-1; Nuclear factor p97; Pore targeting complex 97 kDa subunit; PTAC97;)
genome : 45,726,861 - 45,734,389 (7,529)
query : 1 - 896 (896/896)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15.5, nucl 5.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
HIX0013923
HIT000113224 (
ENST00000290158
)
(Importin subunit beta-1; Importin-90; Karyopherin subunit beta-1; Nuclear factor p97; Pore targeting complex 97 kDa subunit; PTAC97;)
genome : 45,727,204 - 45,762,871 (35,668)
query : 1 - 6,139 (6,139/6,139)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14, nucl 5.5, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
HIX0013923
HIT000199180 (
NM_002265
)
(Importin subunit beta-1; Importin-90; Karyopherin subunit beta-1; Nuclear factor p97; Pore targeting complex 97 kDa subunit; PTAC97;)
genome : 45,727,204 - 45,761,004 (33,801)
query : 1 - 4,272 (4,272/4,276)
22 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14, nucl 5.5, extr 2, mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
HIX0013923
HIT000193420
(
L38951
)
Representative transcript
(Importin subunit beta-1; Importin-90; Karyopherin subunit beta-1; Nuclear factor p97; Pore targeting complex 97 kDa subunit; PTAC97;)
genome : 45,727,275 - 45,760,998 (33,724)
query : 1 - 4,212 (4,212/4,212)
22 exons
identity = 0.993
5'(0.997;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.978)3'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR001494 : Importin-beta, N-terminal domain
IPR011989 : Armadillo-like helical
IPR021133 : HEAT, type 2
IPR027140 : Importin subunit beta-1
GO :
0005515 : Molecular Function : protein binding
0006886 : Biological Process : intracellular protein transport
0006913 : Biological Process : nucleocytoplasmic transport
0008536 : Molecular Function : Ran GTPase binding
0008565 : Molecular Function : protein transporter activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14, nucl 5.5, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168224
Danio
sp. (Zebrafish) : BC107501
Gallus
sp. (Chicken) : CR523027
Mus
sp. (Mouse) : D67015
Monodelphis
sp. (Opossum) : ENSMODT00000015942
Pongo
sp. (Orangutan) : ENSPPYT00000029414
Tetraodon
sp. (Tetraodon) : GSTENT00012343001
Rattus
sp. (Rat) : L38644
Takifugu
sp. (Fugu) : SINFRUT00000139348
Pan
sp. (Chimpanzee) : XM_511927
Canis
sp. (Dog) : XM_859343
Bos
sp. (Cow) : XM_869563
Equus
sp. (Horse) : XR_036266
HIX0013923
HIT000051773
(
BC036703
)
(Importin subunit beta-1; Importin-90; Karyopherin subunit beta-1; Nuclear factor p97; Pore targeting complex 97 kDa subunit; PTAC97;)
genome : 45,727,304 - 45,760,047 (32,744)
query : 1 - 3,215 (3,215/3,233)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR001494 : Importin-beta, N-terminal domain
IPR011989 : Armadillo-like helical
IPR021133 : HEAT, type 2
IPR027140 : Importin subunit beta-1
GO :
0005515 : Molecular Function : protein binding
0006886 : Biological Process : intracellular protein transport
0006913 : Biological Process : nucleocytoplasmic transport
0008536 : Molecular Function : Ran GTPase binding
0008565 : Molecular Function : protein transporter activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14, nucl 5.5, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
HIX0013923
HIT000433646
(
AK314780
)
(Importin subunit beta-1; Importin-90; Karyopherin subunit beta-1; Nuclear factor p97; Pore targeting complex 97 kDa subunit; PTAC97;)
genome : 45,727,328 - 45,758,035 (30,708)
query : 3 - 2,915 (2,913/2,916)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001494 : Importin-beta, N-terminal domain
IPR011989 : Armadillo-like helical
IPR021133 : HEAT, type 2
IPR027140 : Importin subunit beta-1
GO :
0006886 : Biological Process : intracellular protein transport
0006913 : Biological Process : nucleocytoplasmic transport
0008536 : Molecular Function : Ran GTPase binding
0008565 : Molecular Function : protein transporter activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14, nucl 5.5, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
HIX0013923
HIT000031610
(
BC003572
)
(Importin subunit beta-1; Importin-90; Karyopherin subunit beta-1; Nuclear factor p97; Pore targeting complex 97 kDa subunit; PTAC97;)
genome : 45,727,330 - 45,760,047 (32,718)
query : 1 - 3,189 (3,189/3,207)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR001494 : Importin-beta, N-terminal domain
IPR011989 : Armadillo-like helical
IPR021133 : HEAT, type 2
IPR027140 : Importin subunit beta-1
GO :
0005515 : Molecular Function : protein binding
0006886 : Biological Process : intracellular protein transport
0006913 : Biological Process : nucleocytoplasmic transport
0008536 : Molecular Function : Ran GTPase binding
0008565 : Molecular Function : protein transporter activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14, nucl 5.5, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
HIX0013923
HIT000050880
(
BC024045
)
(Importin subunit beta-1; Importin-90; Karyopherin subunit beta-1; Nuclear factor p97; Pore targeting complex 97 kDa subunit; PTAC97;)
genome : 45,727,330 - 45,760,047 (32,718)
query : 1 - 3,189 (3,189/3,207)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR001494 : Importin-beta, N-terminal domain
IPR011989 : Armadillo-like helical
IPR021133 : HEAT, type 2
IPR027140 : Importin subunit beta-1
GO :
0005515 : Molecular Function : protein binding
0006886 : Biological Process : intracellular protein transport
0006913 : Biological Process : nucleocytoplasmic transport
0008536 : Molecular Function : Ran GTPase binding
0008565 : Molecular Function : protein transporter activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14, nucl 5.5, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
HIX0013923
HIT000689868 (
ENST00000577918
)
(Importin subunit beta-1; Importin-90; Karyopherin subunit beta-1; Nuclear factor p97; Pore targeting complex 97 kDa subunit; PTAC97;)
genome : 45,727,518 - 45,739,604 (12,087)
query : 1 - 859 (859/859)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 16, nucl 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
HIX0013923
HIT000266359
(
BT009797
)
(Importin subunit beta-1; Importin-90; Karyopherin subunit beta-1; Nuclear factor p97; Pore targeting complex 97 kDa subunit; PTAC97;)
genome : 45,727,611 - 45,758,034 (30,424)
query : 1 - 2,629 (2,629/2,631)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR000225 : Armadillo
IPR001494 : Importin-beta, N-terminal domain
IPR011989 : Armadillo-like helical
IPR021133 : HEAT, type 2
IPR027140 : Importin subunit beta-1
GO :
0005515 : Molecular Function : protein binding
0006886 : Biological Process : intracellular protein transport
0006913 : Biological Process : nucleocytoplasmic transport
0008536 : Molecular Function : Ran GTPase binding
0008565 : Molecular Function : protein transporter activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14, nucl 5.5, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
HIX0013923
HIT000689825 (
ENST00000577875
)
(Importin subunit beta-1; Importin-90; Karyopherin subunit beta-1; Nuclear factor p97; Pore targeting complex 97 kDa subunit; PTAC97;)
genome : 45,727,724 - 45,736,007 (8,284)
query : 1 - 605 (605/605)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 14.5, nucl 9.5, cysk 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
HIX0013923
HIT000725315 (
NM_001276453
)
(Importin subunit beta-1; Importin-90; Karyopherin subunit beta-1; Nuclear factor p97; Pore targeting complex 97 kDa subunit; PTAC97;)
genome : 45,728,562 - 45,761,004 (32,443)
query : 1 - 3,947 (3,947/3,951)
21 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cysk 7, nucl 5, mito 5, mito_nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
HIX0013923
HIT000496087
(
AK301463
)
(Importin subunit beta-1; Importin-90; Karyopherin subunit beta-1; Nuclear factor p97; Pore targeting complex 97 kDa subunit; PTAC97;)
genome : 45,728,562 - 45,760,046 (31,485)
query : 1 - 2,989 (2,989/2,989)
21 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;0.993;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
IPR021133 : HEAT, type 2
IPR027140 : Importin subunit beta-1
GO :
0006913 : Biological Process : nucleocytoplasmic transport
0008565 : Molecular Function : protein transporter activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cysk 7, nucl 5, mito 5, mito_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
HIX0013923
HIT000639672 (
ENST00000540627
)
(Importin subunit beta-1; Importin-90; Karyopherin subunit beta-1; Nuclear factor p97; Pore targeting complex 97 kDa subunit; PTAC97;)
genome : 45,728,562 - 45,760,046 (31,485)
query : 1 - 2,989 (2,989/2,989)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cysk 7, nucl 5, mito 5, mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
HIX0013923
HIT000493769
(
AK299145
)
(Importin subunit beta-1; Importin-90; Karyopherin subunit beta-1; Nuclear factor p97; Pore targeting complex 97 kDa subunit; PTAC97;)
genome : 45,734,291 - 45,760,046 (25,756)
query : 1 - 2,346 (2,346/2,346)
17 exons
identity = 0.998
5'(0.985;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000;1.000;0.988;0.991;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
IPR021133 : HEAT, type 2
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, nucl 10.5, cyto 9.5, cysk 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
HIX0013923
HIT000636724 (
ENST00000537679
)
(Importin subunit beta-1; Importin-90; Karyopherin subunit beta-1; Nuclear factor p97; Pore targeting complex 97 kDa subunit; PTAC97;)
genome : 45,734,291 - 45,760,046 (25,756)
query : 1 - 2,347 (2,347/2,347)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cysk 6, nucl 5, mito 5, mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
HIX0013923
HIT000693995 (
ENST00000582097
)
(Importin subunit beta-1; Importin-90; Karyopherin subunit beta-1; Nuclear factor p97; Pore targeting complex 97 kDa subunit; PTAC97;)
genome : 45,734,291 - 45,760,046 (25,756)
query : 1 - 2,347 (2,347/2,347)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cysk 6, nucl 5, mito 5, mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
HIX0013923
HIT000694894 (
ENST00000583013
)
(Importin subunit beta-1; Importin-90; Karyopherin subunit beta-1; Nuclear factor p97; Pore targeting complex 97 kDa subunit; PTAC97;)
genome : 45,745,731 - 45,750,927 (5,197)
query : 1 - 742 (742/742)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 11.5, extr 10, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
HIX0013923
HIT000690656 (
ENST00000578718
)
(Importin subunit beta-1; Importin-90; Karyopherin subunit beta-1; Nuclear factor p97; Pore targeting complex 97 kDa subunit; PTAC97;)
genome : 45,747,743 - 45,752,121 (4,379)
query : 1 - 550 (550/550)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 13, nucl 2, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
HIX0013923
HIT000691821 (
ENST00000579901
)
(Importin subunit beta-1; Importin-90; Karyopherin subunit beta-1; Nuclear factor p97; Pore targeting complex 97 kDa subunit; PTAC97;)
genome : 45,748,065 - 45,753,852 (5,788)
query : 18 - 594 (577/594)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.971
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 12, cyto 12, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
HIX0013923
HIT000691939 (
ENST00000580019
)
(Importin subunit beta-1; Importin-90; Karyopherin subunit beta-1; Nuclear factor p97; Pore targeting complex 97 kDa subunit; PTAC97;)
genome : 45,750,455 - 45,751,205 (751)
query : 1 - 427 (427/427)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 9, cyto_nucl 8, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
HIX0013923
HIT000692486 (
ENST00000580573
)
(Importin subunit beta-1; Importin-90; Karyopherin subunit beta-1; Nuclear factor p97; Pore targeting complex 97 kDa subunit; PTAC97;)
genome : 45,754,414 - 45,756,005 (1,592)
query : 1 - 556 (556/556)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 11, cyto_nucl 9.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
HIX0013923
HIT000692078 (
ENST00000580158
)
(Importin subunit beta-1; Karyopherin subunit beta-1; Nuclear factor p97; Pore targeting complex 97 kDa subunit; PTAC97;)
genome : 45,757,246 - 45,759,955 (2,710)
query : 1 - 603 (603/603)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, cyto_mito 12.3333, cyto 9, extr 7,
cyto_nucl 5.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
HIX0013923
HIT000694023 (
ENST00000582126
)
(Hypothetical short protein.)
genome : 45,757,969 - 45,761,877 (3,909)
query : 1 - 653 (653/653)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 4.5, cyto_nucl 4.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013923)
HIX0039659
HIT000193585
(
L39924
)
Representative transcript
(Non-protein coding transcript.)
genome : 45,759,783 - 45,760,049 (267)
query : 1 - 267 (267/267)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039659)
HIX0039659
HIT000690424 (
ENST00000578482
)
(Non-protein coding transcript.)
genome : 45,759,783 - 45,760,049 (267)
query : 1 - 267 (267/267)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039659)
HIX0202388
HIT000690918 (
ENST00000578982
)
(TANK-binding kinase 1-binding protein 1.)
genome : 45,771,447 - 45,776,092 (4,646)
query : 1 - 733 (733/733)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, cyto 9.5, nucl 7.5, extr 7, cysk 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202388)
HIX0202388
HIT000636632 (
ENST00000537587
)
(TANK-binding kinase 1-binding protein 1.)
genome : 45,771,985 - 45,776,133 (4,149)
query : 1 - 705 (705/705)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 9.5, extr 8, cyto 7.5, cysk 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202388)
HIX0202388
HIT000205031 (
NM_014726
)
(TANK-binding kinase 1-binding protein 1; TBK1-binding protein 1;)
genome : 45,772,630 - 45,789,428 (16,799)
query : 1 - 4,133 (4,133/4,150)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14.5, nucl 13.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202388)
HIX0202388
HIT000435998
(
BC152407
)
(TANK-binding kinase 1-binding protein 1; TBK1-binding protein 1;)
genome : 45,772,630 - 45,789,416 (16,787)
query : 1 - 4,121 (4,121/4,141)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
InterPro :
IPR024581 : Tbk1/Ikki binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14.5, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202388)
HIX0202388
HIT000436128
(
BC167150
)
(TANK-binding kinase 1-binding protein 1; TBK1-binding protein 1;)
genome : 45,772,630 - 45,789,416 (16,787)
query : 1 - 4,121 (4,121/4,141)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
InterPro :
IPR024581 : Tbk1/Ikki binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14.5, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202388)
HIX0202388
HIT000000500
(
AB018318
)
Representative transcript
(TANK-binding kinase 1-binding protein 1; TBK1-binding protein 1;)
genome : 45,772,630 - 45,789,416 (16,787)
query : 1 - 4,121 (4,121/4,121)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14.5, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202388)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK014173
Rattus
sp. (Rat) : BC076503
Bos
sp. (Cow) : BC149853
Equus
sp. (Horse) : ENSECAT00000017114
Oryzias
sp. (Medaka) : ENSORLT00000015254
Pongo
sp. (Orangutan) : ENSPPYT00000010356
Tetraodon
sp. (Tetraodon) : GSTENT00031475001
Takifugu
sp. (Fugu) : SINFRUT00000152633
Macaca
sp. (Macaque) : XM_001082242
Danio
sp. (Zebrafish) : XM_001919285
Pan
sp. (Chimpanzee) : XM_511928
Canis
sp. (Dog) : XM_548163
HIX0202388
HIT000314977 (
ENST00000361722
)
(TANK-binding kinase 1-binding protein 1; TBK1-binding protein 1;)
genome : 45,772,630 - 45,789,416 (16,787)
query : 1 - 4,121 (4,121/4,121)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14.5, nucl 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202388)
HIX0202388
HIT000386618
(
BC111418
)
(TANK-binding kinase 1-binding protein 1.)
genome : 45,773,051 - 45,788,856 (15,806)
query : 1 - 2,010 (2,010/2,010)
5 exons
identity = 0.991
5'(0.997;1.000;1.000;0.929;0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 14.5, cyto 10, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202388)
HIX0027127
HIT000068379
(
AF093098
)
Representative transcript
(T-box transcription factor TBX21; T-box protein 21; T-cell-specific T-box transcription factor T-bet; Transcription factor TBLYM;)
genome : 45,810,610 - 45,823,485 (12,876)
query : 1 - 2,572 (2,572/2,589)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001699 : Transcription factor, T-box
IPR008967 : p53-like transcription factor, DNA-binding
IPR018186 : Transcription factor, T-box, conserved site
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027127)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK054495
Macaca
sp. (Macaque) : ENSMMUT00000009906
Oryzias
sp. (Medaka) : ENSORLT00000015260
Pongo
sp. (Orangutan) : ENSPPYT00000010357
Rattus
sp. (Rat) : ENSRNOT00000012538
Tetraodon
sp. (Tetraodon) : GSTENT00019159001
Takifugu
sp. (Fugu) : SINFRUT00000139368
Pan
sp. (Chimpanzee) : XM_001173500
Monodelphis
sp. (Opossum) : XM_001372324
Equus
sp. (Horse) : XM_001917606
Canis
sp. (Dog) : XM_548164
Bos
sp. (Cow) : XM_583748
Danio
sp. (Zebrafish) : XM_688029
HIX0027127
HIT000204325 (
NM_013351
)
(T-box transcription factor TBX21; T-box protein 21; T-cell-specific T-box transcription factor T-bet; Transcription factor TBLYM;)
genome : 45,810,610 - 45,823,485 (12,876)
query : 1 - 2,572 (2,572/2,589)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16.5, cyto 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027127)
HIX0027127
HIT000102560 (
ENST00000177694
)
(T-box transcription factor TBX21; T-box protein 21; T-cell-specific T-box transcription factor T-bet; Transcription factor TBLYM;)
genome : 45,810,610 - 45,823,485 (12,876)
query : 1 - 2,572 (2,572/2,572)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16.5, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027127)
HIX0027127
HIT000331414
(
AK223634
)
(T-box transcription factor TBX21; T-box protein 21; T-cell-specific T-box transcription factor T-bet; Transcription factor TBLYM;)
genome : 45,810,617 - 45,822,821 (12,205)
query : 1 - 1,901 (1,901/1,901)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001699 : Transcription factor, T-box
IPR008967 : p53-like transcription factor, DNA-binding
IPR018186 : Transcription factor, T-box, conserved site
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027127)
HIX0027127
HIT000052247
(
BC039739
)
(T-box transcription factor TBX21; T-box protein 21; T-cell-specific T-box transcription factor T-bet; Transcription factor TBLYM;)
genome : 45,810,653 - 45,823,485 (12,833)
query : 9 - 2,537 (2,529/2,552)
6 exons
identity = 1.000
5'(0.998;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.996
InterPro :
IPR001699 : Transcription factor, T-box
IPR008967 : p53-like transcription factor, DNA-binding
IPR018186 : Transcription factor, T-box, conserved site
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027127)
HIX0027127
HIT000074823
(
AF241243
)
(T-box transcription factor TBX21; T-box protein 21; T-cell-specific T-box transcription factor T-bet; Transcription factor TBLYM;)
genome : 45,810,775 - 45,822,732 (11,958)
query : 1 - 1,654 (1,654/1,654)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001699 : Transcription factor, T-box
IPR008967 : p53-like transcription factor, DNA-binding
IPR018186 : Transcription factor, T-box, conserved site
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027127)
HIX0027127
HIT000693234 (
ENST00000581328
)
(T-box transcription factor TBX21; T-box protein 21; T-cell-specific T-box transcription factor T-bet; Transcription factor TBLYM;)
genome : 45,810,791 - 45,820,172 (9,382)
query : 1 - 718 (718/718)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 12.5, cyto_nucl 9, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027127)
HIX0202402
HIT000259000
(
BC028010
)
(Oxysterol-binding protein-related protein 6 isoform d.)
genome : 45,884,738 - 45,899,146 (14,409)
query : 1 - 2,839 (2,839/2,903)
15 exons
identity = 0.995
3'(0.998;1.000;1.000;0.959;0.977;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000648 : Oxysterol-binding protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 14.5, cyto 8, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202402)
HIX0202402
HIT000213317 (
NM_145798
)
(Oxysterol-binding protein-related protein 7; ORP-7; OSBP-related protein 7;)
genome : 45,884,733 - 45,899,147 (14,415)
query : 1 - 3,656 (3,656/3,674)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202402)
HIX0202402
HIT000261893
(
BC065482
)
Representative transcript
(Oxysterol-binding protein-related protein 7; ORP-7; OSBP-related protein 7;)
genome : 45,884,738 - 45,899,119 (14,382)
query : 1 - 3,623 (3,623/3,640)
23 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000648 : Oxysterol-binding protein
IPR001849 : Pleckstrin homology domain
IPR018494 : Oxysterol-binding protein, conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202402)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK154677
Bos
sp. (Cow) : BC151651
Canis
sp. (Dog) : ENSCAFT00000026573
Equus
sp. (Horse) : ENSECAT00000020693
Macaca
sp. (Macaque) : ENSMMUT00000026750
Monodelphis
sp. (Opossum) : ENSMODT00000015959
Oryzias
sp. (Medaka) : ENSORLT00000022011
Pongo
sp. (Orangutan) : ENSPPYT00000010358
Tetraodon
sp. (Tetraodon) : GSTENT00031471001
Takifugu
sp. (Fugu) : SINFRUT00000180652
Rattus
sp. (Rat) : XM_001081327
Danio
sp. (Zebrafish) : XM_691235
Pan
sp. (Chimpanzee) : XR_022441
HIX0202402
HIT000102171 (
ENST00000007414
)
(Oxysterol-binding protein-related protein 7; ORP-7; OSBP-related protein 7;)
genome : 45,884,738 - 45,899,136 (14,399)
query : 1 - 3,640 (3,640/3,640)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202402)
HIX0202402
HIT000078851
(
AF392446
)
(Oxysterol-binding protein-related protein 7; ORP-7; OSBP-related protein 7;)
genome : 45,884,739 - 45,899,200 (14,462)
query : 1 - 3,349 (3,349/3,349)
24 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000648 : Oxysterol-binding protein
IPR001849 : Pleckstrin homology domain
IPR018494 : Oxysterol-binding protein, conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202402)
HIX0202402
HIT000475989 (
ENST00000392507
)
(Oxysterol-binding protein-related protein 7; ORP-7; OSBP-related protein 7;)
genome : 45,884,739 - 45,899,200 (14,462)
query : 1 - 3,349 (3,349/3,349)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202402)
HIX0202402
HIT000328821
(
AB208886
)
(Oxysterol-binding protein-related protein 7; ORP-7; OSBP-related protein 7;)
genome : 45,884,739 - 45,894,367 (9,629)
query : 1 - 4,497 (4,497/4,497)
11 exons
identity = 1.000
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000648 : Oxysterol-binding protein
IPR018494 : Oxysterol-binding protein, conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto_nucl 11.5, nucl 11, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202402)
HIX0202402
HIT000695048 (
ENST00000583167
)
(Oxysterol-binding protein-related protein 7; ORP-7; OSBP-related protein 7;)
genome : 45,884,739 - 45,894,367 (9,629)
query : 1 - 4,497 (4,497/4,497)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto_nucl 11.5, nucl 11, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202402)
HIX0202402
HIT000691652 (
ENST00000579728
)
(Oxysterol-binding protein-related protein 7; ORP-7; OSBP-related protein 7;)
genome : 45,884,740 - 45,898,224 (13,485)
query : 1 - 4,104 (4,104/4,104)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202402)
HIX0202402
HIT000077444
(
AF323729
)
(Oxysterol-binding protein-related protein 7; ORP-7; OSBP-related protein 7;)
genome : 45,885,495 - 45,899,136 (13,642)
query : 1 - 2,883 (2,883/2,883)
23 exons
identity = 1.000
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000648 : Oxysterol-binding protein
IPR001849 : Pleckstrin homology domain
IPR018494 : Oxysterol-binding protein, conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202402)
HIX0202402
HIT000690403 (
ENST00000578461
)
(Oxysterol-binding protein-related protein 3; ORP-3; OSBP-related protein 3;)
genome : 45,885,582 - 45,886,481 (900)
query : 1 - 430 (430/430)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 10, cyto_nucl 8.5, extr_plas 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202402)
HIX0202402
HIT000002742
(
AK000267
)
(Oxysterol-binding protein-related protein 7; ORP-7; OSBP-related protein 7;)
genome : 45,890,694 - 45,899,142 (8,449)
query : 1 - 1,872 (1,872/1,934)
16 exons
identity = 0.998
3'(0.961;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.978
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202402)
HIX0202402
HIT000422320
(
AK289523
)
(Oxysterol-binding protein-related protein 7; ORP-7; OSBP-related protein 7;)
genome : 45,892,654 - 45,899,169 (6,516)
query : 1 - 1,594 (1,594/1,594)
12 exons
identity = 0.998
3'(0.985;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.994;0.993)5'
coverage = 1.000
InterPro :
IPR000648 : Oxysterol-binding protein
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202402)
HIX0202402
HIT000692060 (
ENST00000580140
)
(Oxysterol-binding protein-related protein 7; ORP-7; OSBP-related protein 7;)
genome : 45,892,654 - 45,899,169 (6,516)
query : 1 - 1,594 (1,594/1,594)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202402)
HIX0202402
HIT000692718 (
ENST00000580808
)
(Oxysterol-binding protein-related protein 7; ORP-7; OSBP-related protein 7;)
genome : 45,893,632 - 45,894,290 (659)
query : 1 - 495 (495/495)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 12.5, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202402)
HIX0202402
HIT000696564 (
ENST00000584698
)
(Oxysterol-binding protein-related protein 7; ORP-7; OSBP-related protein 7;)
genome : 45,893,953 - 45,896,504 (2,552)
query : 1 - 688 (688/688)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, mito_nucl 13.5, cyto_nucl 13.1667, mito 7,
cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202402)
HIX0202402
HIT000692146 (
ENST00000580226
)
(Oxysterol-binding protein-related protein 7; ORP-7; OSBP-related protein 7;)
genome : 45,896,699 - 45,899,147 (2,449)
query : 1 - 854 (854/854)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 14.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202402)
HIX0202402
HIT000696911 (
ENST00000585051
)
(Oxysterol-binding protein-related protein 7; ORP-7; OSBP-related protein 7;)
genome : 45,897,087 - 45,899,107 (2,021)
query : 1 - 614 (614/614)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 10, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202402)
HIX0013926
HIT000213161 (
NM_145255
)
(Ribosomal protein L10P family protein.)
genome : 45,900,638 - 45,908,907 (8,270)
query : 1 - 1,749 (1,749/1,754)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28.5, mito_pero 15
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013926)
HIX0013926
HIT000213454 (
NM_148887
)
(Ribosomal protein L10P family protein.)
genome : 45,900,638 - 45,908,907 (8,270)
query : 1 - 1,847 (1,847/1,852)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 11.5, mito 10, cyto 5, E.R._mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013926)
HIX0013926
HIT000659881 (
NR_037575
)
(Ribosomal protein L10P family protein.)
genome : 45,900,638 - 45,908,907 (8,270)
query : 1 - 1,898 (1,898/1,903)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21.5, mito_pero 12, nucl 7.5, cyto_nucl 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013926)
HIX0013926
HIT000308040 (
ENST00000351111
)
(Ribosomal protein L10P family protein.)
genome : 45,900,638 - 45,908,883 (8,246)
query : 1 - 1,725 (1,725/1,725)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28.5, mito_pero 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013926)
HIX0013926
HIT000095923
(
BC039852
)
(39S ribosomal protein L10, mitochondrial; L10mt; MRP-L10; 39S ribosomal protein L8, mitochondrial; L8mt; MRP-L8; Precursor;)
genome : 45,900,826 - 45,908,886 (8,061)
query : 1 - 1,540 (1,540/1,627)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001790 : Ribosomal protein L10P
GO :
0005622 : Cellular Component : intracellular
0042254 : Biological Process : ribosome biogenesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28.5, mito_pero 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013926)
HIX0013926
HIT000053810
(
BC052601
)
Representative transcript
(39S ribosomal protein L10, mitochondrial; L10mt; MRP-L10; 39S ribosomal protein L8, mitochondrial; L8mt; MRP-L8; Precursor;)
genome : 45,900,817 - 45,908,896 (8,080)
query : 1 - 1,559 (1,559/1,576)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001790 : Ribosomal protein L10P
GO :
0005622 : Cellular Component : intracellular
0042254 : Biological Process : ribosome biogenesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28.5, mito_pero 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013926)
HIX0013926
HIT000037387
(
BC015904
)
(39S ribosomal protein L10, mitochondrial; L10mt; MRP-L10; 39S ribosomal protein L8, mitochondrial; L8mt; MRP-L8; Precursor;)
genome : 45,900,817 - 45,908,878 (8,062)
query : 1 - 1,535 (1,535/1,549)
5 exons
identity = 0.994
3'(0.991;1.000;0.994;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001790 : Ribosomal protein L10P
GO :
0005622 : Cellular Component : intracellular
0042254 : Biological Process : ribosome biogenesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28.5, mito_pero 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013926)
HIX0013926
HIT000047040
(
AK127167
)
(39S ribosomal protein L10, mitochondrial isoform b.)
genome : 45,900,827 - 45,907,456 (6,630)
query : 1 - 2,435 (2,435/2,435)
5 exons
identity = 0.992
3'(0.999;1.000;1.000;0.994;0.981)5'
coverage = 1.000
InterPro :
IPR001790 : Ribosomal protein L10P
GO :
0005622 : Cellular Component : intracellular
0042254 : Biological Process : ribosome biogenesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 11.5, mito 10, cyto 5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013926)
HIX0013926
HIT000113232 (
ENST00000290208
)
(Ribosomal protein L10P family protein.)
genome : 45,900,827 - 45,907,039 (6,213)
query : 1 - 2,013 (2,013/2,013)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 11.5, mito 10, cyto 5, E.R._mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013926)
HIX0013926
HIT000511945 (
ENST00000414011
)
(Ribosomal protein L10P family protein.)
genome : 45,900,856 - 45,908,900 (8,045)
query : 1 - 1,622 (1,622/1,622)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 11.5, mito 10, cyto 5, E.R._mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013926)
HIX0013926
HIT000488248
(
AK293624
)
(39S ribosomal protein L10, mitochondrial isoform b.)
genome : 45,900,949 - 45,908,896 (7,948)
query : 1 - 1,576 (1,576/1,576)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001790 : Ribosomal protein L10P
GO :
0005622 : Cellular Component : intracellular
0042254 : Biological Process : ribosome biogenesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21.5, mito_pero 12, nucl 7.5, cyto_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013926)
HIX0013926
HIT000519697 (
ENST00000421763
)
(Ribosomal protein L10P family protein.)
genome : 45,900,949 - 45,908,896 (7,948)
query : 1 - 1,576 (1,576/1,576)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21.5, mito_pero 12, nucl 7.5, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013926)
HIX0013926
HIT000570691 (
ENST00000466016
)
(Conserved hypothetical protein.)
genome : 45,904,261 - 45,908,889 (4,629)
query : 1 - 544 (544/544)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, mito_pero 12.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013926)
HIX0013926
HIT000521081 (
ENST00000423147
)
(Conserved hypothetical protein.)
genome : 45,904,440 - 45,908,889 (4,450)
query : 1 - 612 (612/612)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 13.1667, mito 8, cyto 6.5,
cyto_pero 5.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013926)
HIX0013926
HIT000584889 (
ENST00000480901
)
(Conserved hypothetical protein.)
genome : 45,905,674 - 45,908,891 (3,218)
query : 1 - 578 (578/578)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 17, mito_pero 10, plas 9, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013926)
HIX0013927
HIT000211330 (
NM_033413
)
(Leucine-rich repeat-containing protein 46.)
genome : 45,908,993 - 45,915,078 (6,086)
query : 1 - 1,921 (1,921/1,938)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 7, mito 3, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013927)
HIX0013927
HIT000110371 (
ENST00000269025
)
(Leucine-rich repeat-containing protein 46.)
genome : 45,908,993 - 45,915,079 (6,087)
query : 1 - 1,922 (1,922/1,922)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 7, mito 3, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013927)
HIX0013927
HIT000434531
(
AK315665
)
(Leucine-rich repeat-containing protein 46.)
genome : 45,908,993 - 45,914,486 (5,494)
query : 1 - 1,329 (1,329/1,329)
8 exons
identity = 0.999
5'(1.000;1.000;0.991;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 7, mito 3, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013927)
HIX0013927
HIT000691666 (
ENST00000579742
)
(Leucine-rich repeat-containing protein 46.)
genome : 45,909,000 - 45,913,428 (4,429)
query : 1 - 847 (847/847)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 11.6667, nucl 8.5, cyto 7.5,
extr_plas 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013927)
HIX0013927
HIT000691891 (
ENST00000579971
)
(Leucine-rich repeat-containing protein 46.)
genome : 45,909,057 - 45,913,466 (4,410)
query : 1 - 872 (872/872)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, cysk 6, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013927)
HIX0013927
HIT000425562
(
AK292765
)
Representative transcript
(Leucine-rich repeat-containing protein 46.)
genome : 45,909,078 - 45,914,856 (5,779)
query : 1 - 1,614 (1,614/1,614)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.993;
1.000)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 7, mito 3, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013927)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK158517
Rattus
sp. (Rat) : BC079258
Bos
sp. (Cow) : BC112534
Equus
sp. (Horse) : ENSECAT00000007653
Pongo
sp. (Orangutan) : ENSPPYT00000010360
Monodelphis
sp. (Opossum) : XM_001372496
Pan
sp. (Chimpanzee) : XM_523819
Canis
sp. (Dog) : XM_859361
HIX0013927
HIT000010480
(
AK027206
)
(Leucine-rich repeat-containing protein 46.)
genome : 45,909,089 - 45,914,594 (5,506)
query : 1 - 2,240 (2,240/2,267)
8 exons
identity = 0.996
5'(1.000;0.991;0.987;1.000;1.000;1.000;1.000;
0.987)3'
coverage = 0.999
InterPro :
IPR001611 : Leucine-rich repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 8, cyto_nucl 6.83333, cyto_pero 5.5,
extr 4, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013927)
HIX0013927
HIT000696448 (
ENST00000584580
)
(Leucine-rich repeat-containing protein 46.)
genome : 45,909,089 - 45,914,594 (5,506)
query : 1 - 2,239 (2,239/2,239)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 8, cyto_nucl 6.83333, cyto_pero 5.5,
extr 4, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013927)
HIX0013927
HIT000034925
(
BC010412
)
(Leucine-rich repeat-containing protein 46.)
genome : 45,909,100 - 45,914,691 (5,592)
query : 1 - 1,427 (1,427/1,444)
8 exons
identity = 0.999
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 7, mito 3, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013927)
HIX0013927
HIT000696673 (
ENST00000584809
)
(Leucine-rich repeat-containing protein 46.)
genome : 45,909,537 - 45,912,614 (3,078)
query : 1 - 859 (859/859)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 18, nucl 14.5, cyto 12.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013927)
HIX0013928
HIT000087482
(
BC010408
)
Representative transcript
(Secernin-2;)
genome : 45,915,058 - 45,918,613 (3,556)
query : 1 - 1,470 (1,470/1,517)
8 exons
identity = 0.999
3'(0.997;0.994;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
InterPro :
IPR005322 : Peptidase C69, dipeptidase A
GO :
0006508 : Biological Process : proteolysis
0016805 : Molecular Function : dipeptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 5, cyto_nucl 4, nucl 3.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013928)
HIX0013928
HIT000212345 (
NM_138355
)
(Peptidase C69, dipeptidase A family protein.)
genome : 45,915,048 - 45,918,699 (3,652)
query : 1 - 1,566 (1,566/1,582)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 5, cyto_nucl 4, nucl 3.5, cyto 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013928)
HIX0013928
HIT000561136 (
NM_001145023
)
(Peptidase C69, dipeptidase A family protein.)
genome : 45,915,048 - 45,918,699 (3,652)
query : 1 - 1,833 (1,833/1,849)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 6, cyto_nucl 5, nucl 3.5, cyto 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013928)
HIX0013928
HIT000086201
(
BC002980
)
(Secernin-2 isoform 1.)
genome : 45,915,058 - 45,918,642 (3,585)
query : 1 - 1,766 (1,766/1,790)
7 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR005322 : Peptidase C69, dipeptidase A
GO :
0006508 : Biological Process : proteolysis
0016805 : Molecular Function : dipeptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 6, cyto_nucl 5, nucl 3.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013928)
HIX0013928
HIT000037942
(
BC017317
)
(Secernin-2;)
genome : 45,915,058 - 45,918,612 (3,555)
query : 1 - 1,469 (1,469/1,488)
8 exons
identity = 0.998
3'(0.997;0.994;1.000;1.000;1.000;0.995;1.000;
1.000)5'
coverage = 0.999
InterPro :
IPR005322 : Peptidase C69, dipeptidase A
GO :
0006508 : Biological Process : proteolysis
0016805 : Molecular Function : dipeptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 4, cyto_nucl 4, lyso 4, nucl 3.5,
cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013928)
HIX0013928
HIT000505891 (
ENST00000407215
)
(Peptidase C69, dipeptidase A family protein.)
genome : 45,915,058 - 45,918,655 (3,598)
query : 1 - 1,779 (1,779/1,779)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 6, cyto_nucl 5, nucl 3.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013928)
HIX0013928
HIT000113234 (
ENST00000290216
)
(Peptidase C69, dipeptidase A family protein.)
genome : 45,915,066 - 45,918,699 (3,634)
query : 1 - 1,548 (1,548/1,548)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 5, cyto_nucl 4, nucl 3.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013928)
HIX0013928
HIT000695998 (
ENST00000584123
)
(Peptidase C69, dipeptidase A family protein.)
genome : 45,915,073 - 45,918,539 (3,467)
query : 1 - 1,745 (1,745/1,745)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto_nucl 8, nucl 5.5, cyto 5.5,
extr_plas 5.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013928)
HIX0013928
HIT000693548 (
ENST00000581645
)
(Peptidase C69, dipeptidase A family protein.)
genome : 45,915,074 - 45,918,613 (3,540)
query : 1 - 1,477 (1,477/1,477)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013928)
HIX0013928
HIT000694350 (
ENST00000582459
)
(Conserved hypothetical protein.)
genome : 45,915,086 - 45,918,216 (3,131)
query : 1 - 1,624 (1,624/1,624)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 3, mito 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013928)
HIX0013928
HIT000696435 (
ENST00000584567
)
(Conserved hypothetical protein.)
genome : 45,915,086 - 45,916,961 (1,876)
query : 1 - 932 (932/932)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 17.5, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013928)
HIX0013928
HIT000423443
(
AK290646
)
(Secernin-2;)
genome : 45,915,114 - 45,918,602 (3,489)
query : 1 - 1,403 (1,403/1,403)
8 exons
identity = 0.999
3'(1.000;0.994;1.000;0.995;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR005322 : Peptidase C69, dipeptidase A
GO :
0006508 : Biological Process : proteolysis
0016805 : Molecular Function : dipeptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 5, cyto_nucl 4, nucl 3.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013928)
HIX0013928
HIT000498459
(
AK303835
)
(Secernin-2 isoform 2.)
genome : 45,915,345 - 45,918,655 (3,311)
query : 1 - 1,492 (1,492/1,492)
7 exons
identity = 0.999
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005322 : Peptidase C69, dipeptidase A
GO :
0006508 : Biological Process : proteolysis
0016805 : Molecular Function : dipeptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 6, cyto_nucl 5, nucl 3.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013928)
HIX0013928
HIT000691778 (
ENST00000579856
)
(Conserved hypothetical protein.)
genome : 45,915,679 - 45,918,631 (2,953)
query : 1 - 952 (952/952)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013928)
HIX0013928
HIT000694971 (
ENST00000583090
)
(Conserved hypothetical protein.)
genome : 45,916,325 - 45,918,470 (2,146)
query : 1 - 683 (683/683)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013928)
HIX0013928
HIT000694546 (
ENST00000582656
)
(Peptidase C69, dipeptidase A family protein.)
genome : 45,916,327 - 45,917,313 (987)
query : 1 - 550 (550/550)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 5, extr 4, cyto_pero 3, cyto 2, pero 2,
extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013928)
HIX0013928
HIT000690267 (
ENST00000578323
)
(Peptidase C69, dipeptidase A family protein.)
genome : 45,916,825 - 45,918,633 (1,809)
query : 1 - 624 (624/624)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013928)
HIX0013928
HIT000427855
(
AK308989
)
(Secernin-2 isoform 2.)
genome : 45,917,027 - 45,918,627 (1,601)
query : 1 - 1,237 (1,237/1,237)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013928)
HIX0013928
HIT000693449 (
ENST00000581546
)
(Conserved hypothetical protein.)
genome : 45,917,027 - 45,918,627 (1,601)
query : 1 - 1,237 (1,237/1,237)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013928)
HIX0013928
HIT000690778 (
ENST00000578840
)
(Conserved hypothetical protein.)
genome : 45,917,040 - 45,918,589 (1,550)
query : 1 - 912 (912/912)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013928)
HIX0013928
HIT000692343 (
ENST00000580428
)
(Conserved hypothetical protein.)
genome : 45,917,268 - 45,918,645 (1,378)
query : 1 - 717 (717/717)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013928)
HIX0027169
HIT000134864 (
ENST00000342234
)
(Transcription factor Sp6.)
genome : 45,922,279 - 45,933,240 (10,962)
query : 1 - 3,795 (3,795/3,795)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027169)
HIX0027169
HIT000047723
(
AK127850
)
Representative transcript
(Transcription factor Sp6.)
genome : 45,922,280 - 45,933,240 (10,961)
query : 1 - 3,794 (3,794/3,794)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027169)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AY338955
Danio
sp. (Zebrafish) : BC065349
Pongo
sp. (Orangutan) : ENSPPYT00000010362
Pan
sp. (Chimpanzee) : ENSPTRT00000017152
Tetraodon
sp. (Tetraodon) : GSTENT00026392001
Takifugu
sp. (Fugu) : SINFRUT00000140740
Rattus
sp. (Rat) : XM_001081357
Macaca
sp. (Macaque) : XM_001083491
Monodelphis
sp. (Opossum) : XM_001372553
Equus
sp. (Horse) : XM_001501900
Canis
sp. (Dog) : XM_548167
Bos
sp. (Cow) : XM_592949
HIX0027169
HIT000319684 (
NM_199262
)
(Transcription factor Sp6.)
genome : 45,922,280 - 45,933,240 (10,961)
query : 1 - 3,794 (3,794/3,794)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027169)
HIX0027169
HIT000047580
(
AK127707
)
(Transcription factor Sp6.)
genome : 45,922,280 - 45,928,559 (6,280)
query : 1 - 3,846 (3,846/3,846)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027169)
HIX0027169
HIT000635345 (
ENST00000536300
)
(Transcription factor Sp6.)
genome : 45,922,280 - 45,928,559 (6,280)
query : 1 - 3,848 (3,848/3,848)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027169)
HIX0027169
HIT000724152 (
NM_001258248
)
(Transcription factor Sp6.)
genome : 45,922,280 - 45,928,516 (6,237)
query : 1 - 3,805 (3,805/3,805)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027169)
HIX0027169
HIT000337503
(
BC103951
)
(Transcription factor Sp6.)
genome : 45,924,271 - 45,933,139 (8,869)
query : 1 - 1,702 (1,702/1,702)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027169)
HIX0027169
HIT000337504
(
BC103952
)
(Transcription factor Sp6.)
genome : 45,924,271 - 45,933,139 (8,869)
query : 1 - 1,702 (1,702/1,702)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027169)
HIX0027169
HIT000337505
(
BC103953
)
(Transcription factor Sp6.)
genome : 45,924,271 - 45,933,139 (8,869)
query : 1 - 1,702 (1,702/1,702)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027169)
HIX0027169
HIT000337506
(
BC103954
)
(Transcription factor Sp6.)
genome : 45,924,271 - 45,933,139 (8,869)
query : 1 - 1,702 (1,702/1,702)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027169)
HIX0202576
HIT000041377
(
BC031827
)
Representative transcript
(Conserved hypothetical protein.)
genome : 45,940,708 - 45,942,556 (1,849)
query : 1 - 816 (816/838)
2 exons
identity = 0.996
5'(1.000;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 7, nucl 6.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202576)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : ENSPTRT00000059872
HIX0202576
HIT000693120 (
ENST00000581213
)
(Conserved hypothetical protein.)
genome : 45,940,708 - 45,942,556 (1,849)
query : 1 - 816 (816/816)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 7, nucl 6.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202576)
HIX0017508
HIT000015986
(
AK091119
)
Representative transcript
(Conserved hypothetical protein.)
genome : 45,956,838 - 45,959,764 (2,927)
query : 1 - 2,927 (2,927/2,927)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, mito 10, cyto_nucl 10, cyto 6, mito_pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017508)
HIX0224858
HIT000692199 (
ENST00000580282
)
(Conserved hypothetical protein.)
genome : 45,956,838 - 45,959,764 (2,927)
query : 1 - 2,927 (2,927/2,927)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224858)
HIX0224398
HIT000694675 (
ENST00000582787
)
(Conserved hypothetical protein.)
genome : 45,968,621 - 45,973,178 (4,558)
query : 1 - 496 (496/496)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 5.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224398)
HIX0224398
HIT000689234 (
ENST00000577279
)
(Hypothetical short protein.)
genome : 45,968,641 - 45,973,135 (4,495)
query : 1 - 374 (374/374)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14, cyto 7, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224398)
HIX0027259
HIT000047090
(
AK127217
)
Representative transcript
(Conserved hypothetical protein.)
genome : 45,969,220 - 45,973,158 (3,939)
query : 1 - 3,936 (3,936/3,936)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9, cyto_nucl 8.16667, nucl 7.5, extr 7, cyto 5.5,
cyto_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027259)
HIX0224398
HIT000692374 (
ENST00000580459
)
(Conserved hypothetical protein.)
genome : 45,969,220 - 45,973,158 (3,939)
query : 1 - 3,939 (3,939/3,939)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224398)
HIX0202462
HIT000199972 (
NM_003110
)
(Transcription factor Sp2;)
genome : 45,973,516 - 46,006,322 (32,807)
query : 1 - 3,111 (3,111/3,132)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202462)
HIX0202462
HIT000358021 (
ENST00000376741
)
(Transcription factor Sp2;)
genome : 45,973,516 - 46,006,323 (32,808)
query : 1 - 3,112 (3,112/3,112)
7 exons
identity = 0.997
5'(1.000;0.963;0.995;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202462)
HIX0202462
HIT000032518
(
BC005914
)
(Transcription factor Sp2;)
genome : 45,973,613 - 45,996,231 (22,619)
query : 1 - 1,820 (1,820/1,848)
4 exons
identity = 0.999
5'(1.000;1.000;0.997;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cysk 13, nucl 9, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202462)
HIX0202462
HIT000037629
(
BC016680
)
Representative transcript
(Transcription factor Sp2;)
genome : 45,973,623 - 46,006,178 (32,556)
query : 1 - 2,862 (2,862/2,876)
7 exons
identity = 0.999
5'(1.000;1.000;0.998;1.000;1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202462)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK019649
Bos
sp. (Cow) : BT020830
Danio
sp. (Zebrafish) : EF613286
Canis
sp. (Dog) : ENSCAFT00000026618
Equus
sp. (Horse) : ENSECAT00000013568
Oryzias
sp. (Medaka) : ENSORLT00000000126
Pongo
sp. (Orangutan) : ENSPPYT00000010363
Tetraodon
sp. (Tetraodon) : GSTENT00011938001
Macaca
sp. (Macaque) : XM_001083602
Monodelphis
sp. (Opossum) : XM_001372614
Rattus
sp. (Rat) : XM_220916
Gallus
sp. (Chicken) : XM_423405
Pan
sp. (Chimpanzee) : XM_511930
HIX0039441
HIT000697138 (
ENST00000585280
)
(Hypothetical short protein.)
genome : 45,974,696 - 46,018,755 (44,060)
query : 1 - 405 (405/405)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039441)
HIX0202462
HIT000042197
(
D28588
)
(Transcription factor Sp2;)
genome : 45,974,974 - 46,006,321 (31,348)
query : 1 - 3,288 (3,288/3,288)
7 exons
identity = 0.998
5'(1.000;1.000;0.997;1.000;1.000;0.995;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202462)
HIX0039441
HIT000549074 (
ENST00000451140
)
(Hypothetical protein.)
genome : 45,975,826 - 46,018,776 (42,951)
query : 1 - 1,039 (1,039/1,039)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 19, plas 6, E.R. 3, cysk_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039441)
HIX0039441
HIT000095218
(
BC038442
)
Representative transcript
(Conserved hypothetical protein.)
genome : 45,976,151 - 45,995,938 (19,788)
query : 1 - 1,716 (1,716/1,807)
2 exons
identity = 0.998
3'(0.998;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039441)
HIX0039441
HIT000509507 (
ENST00000411573
)
(Conserved hypothetical protein.)
genome : 45,976,151 - 46,018,725 (42,575)
query : 1 - 1,738 (1,738/1,738)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039441)
HIX0039441
HIT000530935 (
ENST00000433001
)
(Hypothetical short protein.)
genome : 45,976,997 - 46,018,756 (41,760)
query : 1 - 912 (912/912)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 8, cyto_nucl 6.16667, nucl 5,
cyto_pero 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039441)
HIX0202462
HIT000041972
(
BC033814
)
(Transcription factor Sp2;)
genome : 45,992,677 - 46,006,322 (13,646)
query : 21 - 2,990 (2,970/3,031)
6 exons
identity = 0.998
5'(1.000;0.997;1.000;1.000;0.995;0.998)3'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202462)
HIX0202462
HIT000196950
(
M97190
)
(Transcription factor Sp2;)
genome : 45,992,677 - 46,005,403 (12,727)
query : 19 - 2,063 (2,045/2,063)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.995;0.987)3'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202462)
HIX0202462
HIT000022386
(
AK097532
)
(Transcription factor Sp2;)
genome : 46,002,431 - 46,008,712 (6,282)
query : 1 - 2,129 (2,129/2,129)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202462)
HIX0224987
HIT000696148 (
ENST00000584276
)
(Hypothetical short protein.)
genome : 46,007,048 - 46,010,363 (3,316)
query : 19 - 335 (317/335)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.946
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224987)
HIX0013929
HIT000695480 (
ENST00000583599
)
(Pyridoxine-5'-phosphate oxidase; EC=1.4.3.5; Pyridoxamine-phosphate oxidase;)
genome : 46,018,872 - 46,023,743 (4,872)
query : 1 - 560 (560/560)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.4.3.5
KEGG pathway :
00750 : Vitamin B6 metabolism (24)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013929)
HIX0013929
HIT000206962 (
NM_018129
)
(Pyridoxine-5'-phosphate oxidase; EC=1.4.3.5; Pyridoxamine-phosphate oxidase;)
genome : 46,018,889 - 46,026,674 (7,786)
query : 1 - 3,465 (3,465/3,482)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.4.3.5
KEGG pathway :
00750 : Vitamin B6 metabolism (24)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 9, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013929)
HIX0013929
HIT000498416
(
AK303792
)
(Pyridoxine-5'-phosphate oxidase; EC=1.4.3.5; Pyridoxamine-phosphate oxidase;)
genome : 46,018,937 - 46,024,507 (5,571)
query : 2 - 1,197 (1,196/1,197)
6 exons
identity = 0.999
5'(1.000;0.992;1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 1.4.3.5
KEGG pathway :
00750 : Vitamin B6 metabolism (24)
01100 : Metabolic pathways (1346)
InterPro :
IPR000659 : Pyridoxamine 5'-phosphate oxidase
IPR011576 : Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain
IPR012349 : FMN-binding split barrel
IPR019576 : Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal
IPR019740 : Pyridoxamine 5'-phosphate oxidase, conserved site
GO :
0004733 : Molecular Function : pyridoxamine-phosphate oxidase activity
0008615 : Biological Process : pyridoxine biosynthetic process
0010181 : Molecular Function : FMN binding
0016491 : Molecular Function : oxidoreductase activity
0016638 : Molecular Function : oxidoreductase activity, acting on the CH-NH2 group of donors
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 7, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013929)
HIX0013929
HIT000003871
(
AK001397
)
Representative transcript
(Pyridoxine-5'-phosphate oxidase; EC=1.4.3.5; Pyridoxamine-phosphate oxidase;)
genome : 46,018,937 - 46,025,654 (6,718)
query : 1 - 2,396 (2,396/2,396)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 1.4.3.5
KEGG pathway :
00750 : Vitamin B6 metabolism (24)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 9, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013929)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169113
Mus
sp. (Mouse) : BC026564
Danio
sp. (Zebrafish) : BC057246
Bos
sp. (Cow) : BC103208
Tetraodon
sp. (Tetraodon) : CR712540
Equus
sp. (Horse) : ENSECAT00000015839
Oryzias
sp. (Medaka) : ENSORLT00000015380
Pongo
sp. (Orangutan) : ENSPPYT00000010364
Takifugu
sp. (Fugu) : SINFRUT00000174689
Pan
sp. (Chimpanzee) : XM_001173409
Monodelphis
sp. (Opossum) : XM_001372652
Canis
sp. (Dog) : XM_537661
HIX0013929
HIT000103903 (
ENST00000225573
)
(Pyridoxine-5'-phosphate oxidase; EC=1.4.3.5; Pyridoxamine-phosphate oxidase;)
genome : 46,018,937 - 46,025,654 (6,718)
query : 1 - 2,397 (2,397/2,397)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.4.3.5
KEGG pathway :
00750 : Vitamin B6 metabolism (24)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 9, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013929)
HIX0013929
HIT000498289
(
AK303665
)
(Pyridoxine-5'-phosphate oxidase; EC=1.4.3.5; Pyridoxamine-phosphate oxidase;)
genome : 46,018,937 - 46,024,596 (5,660)
query : 1 - 1,210 (1,210/1,210)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.4.3.5
KEGG pathway :
00750 : Vitamin B6 metabolism (24)
01100 : Metabolic pathways (1346)
InterPro :
IPR000659 : Pyridoxamine 5'-phosphate oxidase
IPR011576 : Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain
IPR012349 : FMN-binding split barrel
IPR019576 : Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal
IPR019740 : Pyridoxamine 5'-phosphate oxidase, conserved site
GO :
0004733 : Molecular Function : pyridoxamine-phosphate oxidase activity
0008615 : Biological Process : pyridoxine biosynthetic process
0010181 : Molecular Function : FMN binding
0016491 : Molecular Function : oxidoreductase activity
0016638 : Molecular Function : oxidoreductase activity, acting on the CH-NH2 group of donors
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 11, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013929)
HIX0013929
HIT000532488 (
ENST00000434554
)
(Pyridoxine-5'-phosphate oxidase; EC=1.4.3.5; Pyridoxamine-phosphate oxidase;)
genome : 46,018,937 - 46,024,596 (5,660)
query : 1 - 1,210 (1,210/1,210)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.4.3.5
KEGG pathway :
00750 : Vitamin B6 metabolism (24)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 11, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013929)
HIX0013929
HIT000643885 (
ENST00000544840
)
(Pyridoxine-5'-phosphate oxidase; EC=1.4.3.5; Pyridoxamine-phosphate oxidase;)
genome : 46,018,937 - 46,024,507 (5,571)
query : 1 - 1,196 (1,196/1,196)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.4.3.5
KEGG pathway :
00750 : Vitamin B6 metabolism (24)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013929)
HIX0013929
HIT000695126 (
ENST00000583245
)
(Pyridoxine-5'-phosphate oxidase; EC=1.4.3.5; Pyridoxamine-phosphate oxidase;)
genome : 46,018,937 - 46,023,353 (4,417)
query : 1 - 887 (887/887)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.4.3.5
KEGG pathway :
00750 : Vitamin B6 metabolism (24)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 8, extr 6, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013929)
HIX0013929
HIT000695937 (
ENST00000584061
)
(Pyridoxine-5'-phosphate oxidase; EC=1.4.3.5; Pyridoxamine-phosphate oxidase;)
genome : 46,018,937 - 46,023,278 (4,342)
query : 1 - 537 (537/537)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.4.3.5
KEGG pathway :
00750 : Vitamin B6 metabolism (24)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 8, cyto 6.5, mito_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013929)
HIX0013929
HIT000331022
(
AK223242
)
(Pyridoxine-5'-phosphate oxidase; EC=1.4.3.5; Pyridoxamine-phosphate oxidase;)
genome : 46,018,958 - 46,025,074 (6,117)
query : 1 - 1,798 (1,798/1,799)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.992;1.000;0.998)3'
coverage = 0.999
EC number :
EC 1.4.3.5
KEGG pathway :
00750 : Vitamin B6 metabolism (24)
01100 : Metabolic pathways (1346)
InterPro :
IPR000659 : Pyridoxamine 5'-phosphate oxidase
IPR011576 : Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain
IPR012349 : FMN-binding split barrel
IPR019576 : Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal
IPR019740 : Pyridoxamine 5'-phosphate oxidase, conserved site
GO :
0004733 : Molecular Function : pyridoxamine-phosphate oxidase activity
0008615 : Biological Process : pyridoxine biosynthetic process
0010181 : Molecular Function : FMN binding
0016491 : Molecular Function : oxidoreductase activity
0016638 : Molecular Function : oxidoreductase activity, acting on the CH-NH2 group of donors
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 9, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013929)
HIX0013929
HIT000697178 (
ENST00000585320
)
(Pyridoxine-5'-phosphate oxidase; EC=1.4.3.5; Pyridoxamine-phosphate oxidase;)
genome : 46,018,984 - 46,024,115 (5,132)
query : 1 - 503 (503/503)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.4.3.5
KEGG pathway :
00750 : Vitamin B6 metabolism (24)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 9, cyto 6, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013929)
HIX0013929
HIT000498160
(
AK303536
)
(Pyridoxine-5'-phosphate oxidase; EC=1.4.3.5; Pyridoxamine-phosphate oxidase;)
genome : 46,018,991 - 46,024,588 (5,598)
query : 3 - 1,154 (1,152/1,154)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 0.998
EC number :
EC 1.4.3.5
KEGG pathway :
00750 : Vitamin B6 metabolism (24)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 9, cyto 6, extr_plas 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013929)
HIX0013929
HIT000633938 (
ENST00000534893
)
(Pyridoxine-5'-phosphate oxidase; EC=1.4.3.5; Pyridoxamine-phosphate oxidase;)
genome : 46,018,991 - 46,024,588 (5,598)
query : 1 - 1,152 (1,152/1,152)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.4.3.5
KEGG pathway :
00750 : Vitamin B6 metabolism (24)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 9, cyto 6, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013929)
HIX0013929
HIT000694068 (
ENST00000582171
)
(Pyridoxine-5'-phosphate oxidase; EC=1.4.3.5; Pyridoxamine-phosphate oxidase;)
genome : 46,018,991 - 46,024,588 (5,598)
query : 1 - 1,152 (1,152/1,152)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.4.3.5
KEGG pathway :
00750 : Vitamin B6 metabolism (24)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 9, cyto 6, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013929)
HIX0013929
HIT000032898
(
BC006525
)
(Pyridoxine-5'-phosphate oxidase; EC=1.4.3.5; Pyridoxamine-phosphate oxidase;)
genome : 46,019,002 - 46,025,641 (6,640)
query : 1 - 2,320 (2,320/2,399)
7 exons
identity = 0.998
5'(1.000;0.992;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 1.4.3.5
KEGG pathway :
00750 : Vitamin B6 metabolism (24)
01100 : Metabolic pathways (1346)
InterPro :
IPR000659 : Pyridoxamine 5'-phosphate oxidase
IPR011576 : Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain
IPR012349 : FMN-binding split barrel
IPR019576 : Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal
IPR019740 : Pyridoxamine 5'-phosphate oxidase, conserved site
GO :
0004733 : Molecular Function : pyridoxamine-phosphate oxidase activity
0008615 : Biological Process : pyridoxine biosynthetic process
0010181 : Molecular Function : FMN binding
0016491 : Molecular Function : oxidoreductase activity
0016638 : Molecular Function : oxidoreductase activity, acting on the CH-NH2 group of donors
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 9, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013929)
HIX0013929
HIT000080367
(
AF468030
)
(Pyridoxine-5'-phosphate oxidase; EC=1.4.3.5; Pyridoxamine-phosphate oxidase;)
genome : 46,019,042 - 46,024,148 (5,107)
query : 1 - 786 (786/786)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.4.3.5
KEGG pathway :
00750 : Vitamin B6 metabolism (24)
01100 : Metabolic pathways (1346)
InterPro :
IPR000659 : Pyridoxamine 5'-phosphate oxidase
IPR011576 : Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain
IPR012349 : FMN-binding split barrel
IPR019576 : Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal
IPR019740 : Pyridoxamine 5'-phosphate oxidase, conserved site
GO :
0004733 : Molecular Function : pyridoxamine-phosphate oxidase activity
0008615 : Biological Process : pyridoxine biosynthetic process
0010181 : Molecular Function : FMN binding
0016491 : Molecular Function : oxidoreductase activity
0016638 : Molecular Function : oxidoreductase activity, acting on the CH-NH2 group of donors
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 9, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013929)
HIX0013929
HIT000696670 (
ENST00000584806
)
(Pyridoxine-5'-phosphate oxidase; EC=1.4.3.5; Pyridoxamine-phosphate oxidase;)
genome : 46,022,764 - 46,024,242 (1,479)
query : 1 - 549 (549/549)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.4.3.5
KEGG pathway :
00750 : Vitamin B6 metabolism (24)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13.5, nucl 6.5, extr 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013929)
HIX0224457
HIT000692287 (
ENST00000580372
)
(Hypothetical short protein.)
genome : 46,024,168 - 46,025,638 (1,471)
query : 1 - 396 (396/396)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224457)
HIX0224457
HIT000694039 (
ENST00000582142
)
(Conserved hypothetical protein.)
genome : 46,024,921 - 46,025,641 (721)
query : 1 - 473 (473/473)
2 exons
identity = 0.992
3'(0.980;0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224457)
HIX0013931
HIT000031250
(
BC002865
)
Representative transcript
(Proline-rich protein 15-like protein.)
genome : 46,029,335 - 46,035,110 (5,776)
query : 1 - 1,383 (1,383/1,401)
2 exons
identity = 0.999
3'(0.998;1.000)5'
coverage = 1.000
InterPro :
IPR028237 : Proline-rich protein 15
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 14.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013931)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK087566
Danio
sp. (Zebrafish) : BC078363
Bos
sp. (Cow) : BC102073
Tetraodon
sp. (Tetraodon) : CR720068
Monodelphis
sp. (Opossum) : ENSMODT00000034523
Oryzias
sp. (Medaka) : ENSORLT00000015389
Pongo
sp. (Orangutan) : ENSPPYT00000010365
Takifugu
sp. (Fugu) : SINFRUT00000139390
Macaca
sp. (Macaque) : XM_001084512
Pan
sp. (Chimpanzee) : XM_001173420
Equus
sp. (Horse) : XM_001501935
Canis
sp. (Dog) : XM_845857
HIX0013931
HIT000209175 (
NM_024320
)
(Proline-rich protein 15-like protein.)
genome : 46,029,335 - 46,035,243 (5,909)
query : 1 - 1,516 (1,516/1,530)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 14.5, cyto 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013931)
HIX0013931
HIT000115656 (
ENST00000300557
)
(Proline-rich protein 15-like protein.)
genome : 46,029,333 - 46,035,244 (5,912)
query : 1 - 1,519 (1,519/1,519)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 14.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013931)
HIX0013931
HIT000428455
(
AK309589
)
(Proline-rich protein 15-like protein.)
genome : 46,029,473 - 46,035,214 (5,742)
query : 1 - 929 (929/929)
3 exons
identity = 0.991
3'(0.992;0.969;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 12.5, nucl 10.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013931)
HIX0039281
HIT000324985
(
X97298
)
(Non-protein coding transcript.)
genome : 46,029,623 - 46,029,718 (96)
query : 4 - 100 (97/100)
1 exon
identity = 0.979
5'(0.979)3'
coverage = 0.970
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039281)
HIX0039281
HIT000324989
(
X97302
)
Representative transcript
(Non-protein coding transcript.)
genome : 46,029,621 - 46,029,874 (254)
query : 1 - 259 (259/259)
1 exon
identity = 0.981
5'(0.981)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039281)
HIX0224193
HIT000691775 (
ENST00000579853
)
(Protein of unknown function DUF773 family protein.)
genome : 46,048,374 - 46,051,398 (3,025)
query : 1 - 705 (705/714)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.987
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 12.5, cyto_nucl 9, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224193)
HIX0224193
HIT000689396 (
ENST00000577442
)
(Protein of unknown function DUF773 family protein.)
genome : 46,048,384 - 46,051,922 (3,539)
query : 1 - 617 (617/617)
5 exons
identity = 0.989
5'(1.000;1.000;1.000;0.971;0.975)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 10.5, cyto_nucl 8, nucl 2.5, mito 1,
pero 1, lyso 1, cysk 1, mito_pero 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224193)
HIX0224193
HIT000696853_01 (
ENST00000584991
)
(Protein of unknown function DUF773 family protein.)
genome : 46,048,415 - 46,059,107 (10,693)
query : 1 - 1,862 (1,862/1,862)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 14, extr 7, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224193)
HIX0224193
HIT000696393 (
ENST00000584525
)
(Protein of unknown function DUF773 family protein.)
genome : 46,048,416 - 46,051,502 (3,087)
query : 1 - 530 (530/530)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 11, nucl 10, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224193)
HIX0224193
HIT000694169 (
ENST00000582275
)
(Conserved hypothetical protein.)
genome : 46,048,488 - 46,051,907 (3,420)
query : 1 - 442 (442/442)
5 exons
identity = 0.984
5'(1.000;1.000;1.000;0.971;0.972)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 10.5, cyto_nucl 9.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224193)
HIX0224193
HIT000689965 (
ENST00000578018
)
(Protein of unknown function DUF773 family protein.)
genome : 46,048,488 - 46,051,813 (3,326)
query : 1 - 567 (567/567)
4 exons
identity = 0.988
5'(1.000;1.000;0.971;0.917)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 7, cysk 3, nucl 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224193)
HIX0224193
HIT000696459 (
ENST00000584592
)
(Protein of unknown function DUF773 family protein.)
genome : 46,048,488 - 46,051,397 (2,910)
query : 1 - 372 (372/372)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 13, cyto_nucl 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224193)
HIX0224193
HIT000690671 (
ENST00000578733
)
(Conserved hypothetical protein.)
genome : 46,048,488 - 46,051,176 (2,689)
query : 1 - 578 (578/578)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 9.5, nucl 9, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224193)
HIX0224193
HIT000691704 (
ENST00000579780
)
(Conserved hypothetical protein.)
genome : 46,048,517 - 46,051,941 (3,425)
query : 1 - 611 (611/611)
4 exons
identity = 0.989
5'(1.000;1.000;0.971;0.977)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 9.5, cyto_nucl 9, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224193)
HIX0224193
HIT000696059 (
ENST00000584186
)
(Conserved hypothetical protein.)
genome : 46,048,531 - 46,051,221 (2,691)
query : 1 - 482 (482/482)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 10, nucl 8, cyto 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224193)
HIX0224193
HIT000695918 (
ENST00000584042
)
(Protein of unknown function DUF773 family protein.)
genome : 46,048,577 - 46,051,927 (3,351)
query : 1 - 638 (638/638)
4 exons
identity = 0.989
5'(1.000;1.000;0.971;0.975)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 9.16667, nucl 8.5, cyto 6.5,
cyto_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224193)
HIX0224193
HIT000692581_01 (
ENST00000580670
)
(Protein of unknown function DUF773 family protein.)
genome : 46,048,726 - 46,059,123 (10,398)
query : 1 - 1,770 (1,770/1,770)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11.5, extr 5, nucl 2.5,
extr_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224193)
HIX0224193
HIT000693564 (
ENST00000581662
)
(Conserved hypothetical protein.)
genome : 46,051,025 - 46,051,949 (925)
query : 1 - 557 (557/557)
2 exons
identity = 0.988
5'(0.992;0.978)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, nucl 1.5, cyto_nucl 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224193)
HIX0224193
HIT000496363
(
AK301739
)
Representative transcript
(Protein of unknown function DUF773 family protein.)
genome : 46,052,188 - 46,054,179 (1,992)
query : 1 - 1,118 (1,118/1,118)
3 exons
identity = 0.999
5'(1.000;0.998;1.000)3'
coverage = 1.000
InterPro :
IPR008491 : Protein of unknown function DUF773
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224193)
HIX0224193
HIT000689752 (
ENST00000577802
)
(Protein of unknown function DUF773 family protein.)
genome : 46,053,994 - 46,055,417 (1,424)
query : 1 - 415 (415/415)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 11, extr 9, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224193)
HIX0224193
HIT000695575_01 (
ENST00000583697
)
(Protein of unknown function DUF773 family protein.)
genome : 46,054,088 - 46,059,134 (5,047)
query : 1 - 852 (852/852)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15, nucl 9.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224193)
HIX0224193
HIT000690602 (
ENST00000578663
)
(Protein of unknown function DUF773 family protein.)
genome : 46,055,916 - 46,059,107 (3,192)
query : 1 - 949 (949/949)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 13.5, nucl 4.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224193)
HIX0224193
HIT000044285
(
AK124412
)
(Protein of unknown function DUF773 family protein.)
genome : 46,056,583 - 46,059,139 (2,557)
query : 1 - 2,455 (2,455/2,455)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008491 : Protein of unknown function DUF773
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, nucl 8, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224193)
HIX0224193
HIT000694373 (
ENST00000582482
)
(Protein of unknown function DUF773 family protein.)
genome : 46,056,583 - 46,059,139 (2,557)
query : 1 - 2,455 (2,455/2,455)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, nucl 8, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224193)
HIX0224789
HIT000690185 (
ENST00000578239
)
(Conserved hypothetical protein.)
genome : 46,057,764 - 46,073,562 (15,799)
query : 1 - 531 (531/531)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 12.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224789)
HIX0224193
HIT000690932_01 (
ENST00000578996
)
(Protein of unknown function DUF773 family protein.)
genome : 46,058,473 - 46,059,140 (668)
query : 1 - 566 (566/566)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 9, mito 9, mito_nucl 9, extr 7, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224193)
HIX0013933
HIT000059485
(
AB047849
)
(Coatomer subunit zeta-2; Zeta-2-coat protein; Zeta-2 COP;)
genome : 46,103,537 - 46,115,147 (11,611)
query : 3 - 900 (898/922)
9 exons
identity = 0.992
3'(0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.958)5'
coverage = 0.997
InterPro :
IPR011012 : Longin-like domain
IPR022775 : AP complex, mu/sigma subunit
GO :
0006810 : Biological Process : transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, cyto 17.5, nucl 8.5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013933)
HIX0013933
HIT000206129 (
NM_016429
)
(Coatomer subunit zeta-2; Zeta-2-coat protein; Zeta-2 COP;)
genome : 46,103,534 - 46,115,152 (11,619)
query : 1 - 906 (906/923)
9 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.968)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, cyto 17.5, nucl 8.5, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013933)
HIX0013933
HIT000037400
(
BC015924
)
(Coatomer subunit zeta-2; Zeta-2-coat protein; Zeta-2 COP;)
genome : 46,103,537 - 46,115,144 (11,608)
query : 1 - 895 (895/914)
9 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.966)5'
coverage = 0.999
InterPro :
IPR011012 : Longin-like domain
IPR022775 : AP complex, mu/sigma subunit
GO :
0006810 : Biological Process : transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, cyto 17.5, nucl 8.5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013933)
HIX0013933
HIT000059214
(
AB037938
)
Representative transcript
(Coatomer subunit zeta-2; Zeta-2-coat protein; Zeta-2 COP;)
genome : 46,103,536 - 46,115,152 (11,617)
query : 1 - 904 (904/914)
9 exons
identity = 0.994
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.968)5'
coverage = 0.999
InterPro :
IPR011012 : Longin-like domain
IPR022775 : AP complex, mu/sigma subunit
GO :
0006810 : Biological Process : transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, cyto 17.5, nucl 8.5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013933)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AB040137
Danio
sp. (Zebrafish) : BC074068
Monodelphis
sp. (Opossum) : ENSMODT00000034509
Oryzias
sp. (Medaka) : ENSORLT00000010068
Pongo
sp. (Orangutan) : ENSPPYT00000010368
Rattus
sp. (Rat) : ENSRNOT00000012276
Takifugu
sp. (Fugu) : SINFRUT00000183073
Macaca
sp. (Macaque) : XM_001084942
Equus
sp. (Horse) : XM_001501945
Canis
sp. (Dog) : XM_548170
Pan
sp. (Chimpanzee) : XR_025340
HIX0013933
HIT000693657 (
ENST00000581756
)
(Coatomer subunit zeta-2; Zeta-2-coat protein; Zeta-2 COP;)
genome : 46,103,533 - 46,114,272 (10,740)
query : 1 - 686 (686/686)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 16.5, nucl 8, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013933)
HIX0013933
HIT000693540 (
ENST00000581637
)
(Coatomer subunit zeta-2; Zeta-2-coat protein; Zeta-2 COP;)
genome : 46,103,533 - 46,114,268 (10,736)
query : 1 - 590 (590/590)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11, mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013933)
HIX0013933
HIT000695295 (
ENST00000583414
)
(Coatomer subunit zeta-2; Zeta-2-coat protein; Zeta-2 COP;)
genome : 46,103,533 - 46,110,618 (7,086)
query : 1 - 520 (520/520)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 6, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013933)
HIX0013933
HIT000692324 (
ENST00000580409
)
(Conserved hypothetical protein.)
genome : 46,103,533 - 46,106,791 (3,259)
query : 1 - 763 (763/763)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 7, cyto 7, cyto_plas 7, nucl 6, mito 4, pero 4,
extr_plas 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013933)
HIX0013933
HIT000102152 (
ENST00000006101
)
(Coatomer subunit zeta-2; Zeta-2-coat protein; Zeta-2 COP;)
genome : 46,103,535 - 46,115,139 (11,605)
query : 1 - 886 (886/886)
9 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.981)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 16.5, nucl 6, mito 4, pero 4,
mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013933)
HIX0013933
HIT000696532 (
ENST00000584666
)
(Coatomer subunit zeta-1 isoform 3.)
genome : 46,103,537 - 46,115,144 (11,608)
query : 1 - 891 (891/891)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 19, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013933)
HIX0013933
HIT000697040 (
ENST00000585182
)
(Conserved hypothetical protein.)
genome : 46,103,537 - 46,105,926 (2,390)
query : 1 - 394 (394/394)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11.5, extr 5, nucl 3.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013933)
HIX0013933
HIT000696817 (
ENST00000584955
)
(Coatomer subunit zeta-2; Zeta-2-coat protein; Zeta-2 COP;)
genome : 46,103,540 - 46,110,648 (7,109)
query : 1 - 713 (713/713)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 12, cyto_nucl 8, cyto 7, mito 6, cysk_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013933)
HIX0013933
HIT000694444 (
ENST00000582553
)
(Coatomer subunit zeta-2; Zeta-2-coat protein; Zeta-2 COP;)
genome : 46,103,548 - 46,115,135 (11,588)
query : 1 - 524 (524/524)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, cyto 10.5, nucl 8.5, extr 6, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013933)
HIX0013933
HIT000691193 (
ENST00000579263
)
(Coatomer subunit zeta-2; Zeta-2-coat protein; Zeta-2 COP;)
genome : 46,109,012 - 46,110,668 (1,657)
query : 11 - 746 (736/746)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.987
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 10.5, cyto 10.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013933)
HIX0013933
HIT000692094 (
ENST00000580174
)
(Coatomer subunit zeta-2; Zeta-2-coat protein; Zeta-2 COP;)
genome : 46,111,258 - 46,115,392 (4,135)
query : 1 - 157 (157/157)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 17, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013933)
HIX0157705
HIT000471065 (
ENST00000385212
)
(Non-protein coding transcript.)
genome : 46,114,527 - 46,114,613 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0157705)
HIX0157705
HIT000658065 (
NR_029687
)
(Non-protein coding transcript.)
genome : 46,114,527 - 46,114,613 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0157705)
HIX0013934
HIT000013033
(
AK056419
)
Representative transcript
(Conserved hypothetical protein.)
genome : 46,122,503 - 46,125,412 (2,910)
query : 1 - 2,909 (2,909/2,909)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27.5, mito_pero 14.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013934)
HIX0013934
HIT000690599 (
ENST00000578660
)
(Conserved hypothetical protein.)
genome : 46,122,503 - 46,125,412 (2,910)
query : 1 - 2,910 (2,910/2,910)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, cyto_mito 16.5, mito_pero 13.6667, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013934)
HIX0224995
HIT000696297 (
ENST00000584428
)
(Hypothetical protein.)
genome : 46,124,243 - 46,125,435 (1,193)
query : 1 - 539 (539/539)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224995)
HIX0013935
HIT000192588
(
L24123
)
(Nuclear factor erythroid 2-related factor 1.)
genome : 46,125,700 - 46,138,841 (13,142)
query : 297 - 4,992 (4,696/4,992)
5 exons
identity = 0.997
5'(0.913;0.999;1.000;1.000;0.999)3'
coverage = 0.941
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000200060 (
NM_003204
)
(Nuclear factor erythroid 2-related factor 1; NF-E2-related factor 1; NFE2-related factor 1; Locus control region-factor 1; Nuclear factor, erythroid derived 2, like 1; Transcription factor 11; TCF-11; Transcription factor HBZ17; Transcription factor LCR-F1;)
genome : 46,125,686 - 46,138,907 (13,222)
query : 1 - 4,874 (4,874/4,891)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000691809 (
ENST00000579889
)
(Hypothetical short protein.)
genome : 46,125,691 - 46,128,508 (2,818)
query : 1 - 568 (568/568)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 6, mito 6, cyto_pero 4.5, mito_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000035017
(
BC010623
)
(Nuclear factor erythroid 2-related factor 1.)
genome : 46,125,704 - 46,138,126 (12,423)
query : 1 - 3,777 (3,777/3,791)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000315290 (
ENST00000362042
)
(Nuclear factor erythroid 2-related factor 1; NF-E2-related factor 1; NFE2-related factor 1; Locus control region-factor 1; Nuclear factor, erythroid derived 2, like 1; Transcription factor 11; TCF-11; Transcription factor HBZ17; Transcription factor LCR-F1;)
genome : 46,125,721 - 46,138,842 (13,122)
query : 1 - 4,774 (4,774/4,774)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000015326
(
AK090459
)
Representative transcript
(Nuclear factor erythroid 2-related factor 1; NF-E2-related factor 1; NFE2-related factor 1; Locus control region-factor 1; Nuclear factor, erythroid derived 2, like 1; Transcription factor 11; TCF-11; Transcription factor HBZ17; Transcription factor LCR-F1;)
genome : 46,125,721 - 46,138,837 (13,117)
query : 1 - 4,764 (4,764/4,764)
6 exons
identity = 0.997
5'(1.000;0.999;1.000;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
Ortholog candidate ( ->
Evola
)
Canis
sp. (Dog) : AJ388511
Gallus
sp. (Chicken) : AJ719867
Mus
sp. (Mouse) : BC099895
Bos
sp. (Cow) : BC140530
Pongo
sp. (Orangutan) : CR859198
Monodelphis
sp. (Opossum) : ENSMODT00000015782
Oryzias
sp. (Medaka) : ENSORLT00000015447
Rattus
sp. (Rat) : ENSRNOT00000012204
Tetraodon
sp. (Tetraodon) : GSTENT00019152001
Takifugu
sp. (Fugu) : SINFRUT00000170430
Macaca
sp. (Macaque) : XM_001087083
Pan
sp. (Chimpanzee) : XM_001173196
Equus
sp. (Horse) : XM_001918164
Danio
sp. (Zebrafish) : XM_001920230
HIX0013935
HIT000696012 (
ENST00000584137
)
(Nuclear factor erythroid 2-related factor 1.)
genome : 46,125,721 - 46,128,728 (3,008)
query : 1 - 529 (529/529)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, cyto_nucl 9, cyto 7, nucl 5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000028442
(
AL833530
)
(Nuclear factor erythroid 2-related factor 1.)
genome : 46,125,725 - 46,138,848 (13,124)
query : 2 - 4,389 (4,388/4,429)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000697149 (
ENST00000585291
)
(Nuclear factor erythroid 2-related factor 1.)
genome : 46,125,725 - 46,138,849 (13,125)
query : 1 - 4,390 (4,390/4,390)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000311320 (
ENST00000357480
)
(Nuclear factor erythroid 2-related factor 1.)
genome : 46,125,732 - 46,138,841 (13,110)
query : 1 - 4,672 (4,672/4,672)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000323618
(
X77366
)
(Nuclear factor erythroid 2-related factor 1; NF-E2-related factor 1; NFE2-related factor 1; Locus control region-factor 1; Nuclear factor, erythroid derived 2, like 1; Transcription factor 11; TCF-11; Transcription factor HBZ17; Transcription factor LCR-F1;)
genome : 46,125,746 - 46,138,842 (13,097)
query : 1 - 4,750 (4,750/4,760)
6 exons
identity = 0.998
5'(0.975;0.999;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000697157 (
ENST00000585299
)
(Hypothetical short protein.)
genome : 46,125,840 - 46,128,434 (2,595)
query : 1 - 537 (537/537)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 14.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000694941 (
ENST00000583060
)
(Non-protein coding transcript.)
genome : 46,125,969 - 46,128,403 (2,435)
query : 1 - 477 (477/477)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000056623
(
BX647976
)
(Nuclear factor erythroid 2-related factor 1.)
genome : 46,126,135 - 46,138,847 (12,713)
query : 2 - 4,198 (4,197/4,218)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.997)3'
coverage = 0.999
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000314921 (
ENST00000361665
)
(Nuclear factor erythroid 2-related factor 1; NF-E2-related factor 1; NFE2-related factor 1; Locus control region-factor 1; Nuclear factor, erythroid derived 2, like 1; Transcription factor 11; TCF-11; Transcription factor HBZ17; Transcription factor LCR-F1;)
genome : 46,126,135 - 46,138,842 (12,708)
query : 1 - 4,729 (4,729/4,729)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000691409 (
ENST00000579481
)
(Hypothetical short protein.)
genome : 46,126,144 - 46,128,436 (2,293)
query : 1 - 564 (564/564)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000694465 (
ENST00000582574
)
(Hypothetical short protein.)
genome : 46,126,145 - 46,128,459 (2,315)
query : 1 - 556 (556/556)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 6, mito 6, cyto_pero 4.5, mito_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000696921 (
ENST00000585062
)
(Nuclear factor erythroid 2-related factor 1.)
genome : 46,126,146 - 46,128,778 (2,633)
query : 1 - 556 (556/556)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, cyto_nucl 7.5, cyto 5, nucl 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000693346 (
ENST00000581441
)
(Hypothetical short protein.)
genome : 46,126,494 - 46,128,491 (1,998)
query : 1 - 552 (552/552)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 6, mito 6, cyto_pero 4.5, mito_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000390670
(
BC131769
)
(Nuclear factor erythroid 2-related factor 1.)
genome : 46,128,240 - 46,135,916 (7,677)
query : 2 - 1,476 (1,475/1,484)
5 exons
identity = 0.997
5'(0.993;1.000;1.000;1.000;1.000)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 6, nucl 4.5, cyto 4.5, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000695091 (
ENST00000583210
)
(Nuclear factor erythroid 2-related factor 1; NF-E2-related factor 1; NFE2-related factor 1; Nuclear factor, erythroid derived 2, like 1;)
genome : 46,131,690 - 46,135,704 (4,015)
query : 1 - 512 (512/512)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.5, cyto 10, nucl 9, extr 7, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000691465 (
ENST00000579537
)
(Nuclear factor erythroid 2-related factor 2 isoform 1.)
genome : 46,131,690 - 46,133,806 (2,117)
query : 1 - 372 (372/372)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, nucl 7.5, cyto_nucl 7.5, cyto 4.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000689365 (
ENST00000577411
)
(Nuclear factor erythroid 2-related factor 1.)
genome : 46,131,843 - 46,135,823 (3,981)
query : 1 - 562 (562/562)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 14, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000696500 (
ENST00000584634
)
(Nuclear factor erythroid 2-related factor 1.)
genome : 46,131,912 - 46,135,693 (3,782)
query : 1 - 588 (588/588)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 12, nucl 8, extr 7, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000691970 (
ENST00000580050
)
(Nuclear factor erythroid 2-related factor 1.)
genome : 46,131,949 - 46,133,950 (2,002)
query : 1 - 476 (476/476)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 10, cyto_nucl 8.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000497011
(
AK302387
)
(Nuclear factor erythroid 2-related factor 1.)
genome : 46,132,037 - 46,137,195 (5,159)
query : 1 - 1,998 (1,998/1,998)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000694052 (
ENST00000582155
)
(Nuclear factor erythroid 2-related factor 1.)
genome : 46,132,037 - 46,137,195 (5,159)
query : 1 - 1,998 (1,998/1,998)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000695259 (
ENST00000583378
)
(Nuclear factor erythroid 2-related factor 1.)
genome : 46,132,054 - 46,137,298 (5,245)
query : 1 - 2,051 (2,051/2,051)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000489177
(
AK294553
)
(Nuclear factor erythroid 2-related factor 1.)
genome : 46,132,072 - 46,137,015 (4,944)
query : 1 - 2,173 (2,173/2,173)
4 exons
identity = 0.997
5'(0.995;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000635267 (
ENST00000536222
)
(Nuclear factor erythroid 2-related factor 1.)
genome : 46,132,072 - 46,137,015 (4,944)
query : 1 - 2,172 (2,172/2,172)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000689385 (
ENST00000577431
)
(Nuclear factor erythroid 2-related factor 1; NF-E2-related factor 1; NFE2-related factor 1; Nuclear factor, erythroid derived 2, like 1;)
genome : 46,132,282 - 46,134,865 (2,584)
query : 1 - 571 (571/583)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.979
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito_nucl 10.1667, nucl 10, mito 10, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000691957 (
ENST00000580037
)
(Nuclear factor erythroid 2-related factor 1.)
genome : 46,133,314 - 46,135,778 (2,465)
query : 1 - 583 (583/583)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 12, cyto 9, extr 5, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000217847
(
U08853
)
(Nuclear factor erythroid 2-related factor 1.)
genome : 46,133,854 - 46,137,405 (3,552)
query : 1 - 2,106 (2,106/2,106)
4 exons
identity = 0.993
5'(0.972;0.882;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0013935
HIT000693225 (
ENST00000581319
)
(Nuclear factor erythroid 2-related factor 1.)
genome : 46,136,239 - 46,137,412 (1,174)
query : 1 - 481 (481/481)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13.5, nucl 7.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013935)
HIX0224956
HIT000695230 (
ENST00000583349
)
(Non-protein coding transcript.)
genome : 46,137,745 - 46,138,031 (287)
query : 1 - 192 (192/192)
2 exons
identity = 0.985
3'(1.000;0.974)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224956)
HIX0013936
HIT000559228 (
NM_001127228
)
(Chromobox protein homolog 1; HP1Hsbeta; Heterochromatin protein 1 homolog beta; HP1 beta; Heterochromatin protein p25; M31; Modifier 1 protein; p25beta;)
genome : 46,147,414 - 46,178,883 (31,470)
query : 1 - 2,232 (2,232/2,253)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013936)
HIX0013936
HIT000031032
(
BC002609
)
Representative transcript
(Chromobox protein homolog 1; HP1Hsbeta; Heterochromatin protein 1 homolog beta; HP1 beta; Heterochromatin protein p25; M31; Modifier 1 protein; p25beta;)
genome : 46,147,414 - 46,178,807 (31,394)
query : 1 - 2,156 (2,156/2,177)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;0.994)5'
coverage = 1.000
InterPro :
IPR000953 : Chromo/chromo shadow domain
IPR008251 : Chromo shadow domain
IPR016197 : Chromo domain-like
IPR017984 : Chromo domain subgroup
IPR023779 : Chromo domain, conserved site
IPR023780 : Chromo domain
GO :
0005634 : Cellular Component : nucleus
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013936)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK014215
Danio
sp. (Zebrafish) : BC045443
Equus
sp. (Horse) : ENSECAT00000008106
Gallus
sp. (Chicken) : ENSGALT00000029894
Oryzias
sp. (Medaka) : ENSORLT00000021342
Pongo
sp. (Orangutan) : ENSPPYT00000010371
Pongo
sp. (Orangutan) : ENSPPYT00000017670
Tetraodon
sp. (Tetraodon) : GSTENT00004640001
Takifugu
sp. (Fugu) : SINFRUT00000170866
Macaca
sp. (Macaque) : XM_001085292
Monodelphis
sp. (Opossum) : XM_001366957
Rattus
sp. (Rat) : XM_340885
Pan
sp. (Chimpanzee) : XM_523820
Canis
sp. (Dog) : XM_548171
Bos
sp. (Cow) : XM_868538
Bos
sp. (Cow) : XM_871608
HIX0013936
HIT000203375 (
NM_006807
)
(Chromobox protein homolog 1; HP1Hsbeta; Heterochromatin protein 1 homolog beta; HP1 beta; Heterochromatin protein p25; M31; Modifier 1 protein; p25beta;)
genome : 46,147,414 - 46,178,560 (31,147)
query : 1 - 2,422 (2,422/2,443)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013936)
HIX0013936
HIT000039200
(
BC021302
)
(Chromobox protein homolog 1; HP1Hsbeta; Heterochromatin protein 1 homolog beta; HP1 beta; Heterochromatin protein p25; M31; Modifier 1 protein; p25beta;)
genome : 46,147,422 - 46,178,361 (30,940)
query : 1 - 2,215 (2,215/2,233)
5 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000953 : Chromo/chromo shadow domain
IPR008251 : Chromo shadow domain
IPR016197 : Chromo domain-like
IPR017984 : Chromo domain subgroup
IPR023779 : Chromo domain, conserved site
IPR023780 : Chromo domain
GO :
0005634 : Cellular Component : nucleus
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013936)
HIX0013936
HIT000103908 (
ENST00000225603
)
(Chromobox protein homolog 1; HP1Hsbeta; Heterochromatin protein 1 homolog beta; HP1 beta; Heterochromatin protein p25; M31; Modifier 1 protein; p25beta;)
genome : 46,147,414 - 46,178,883 (31,470)
query : 1 - 2,232 (2,232/2,232)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013936)
HIX0013936
HIT000476863 (
ENST00000393408
)
(Chromobox protein homolog 1; HP1Hsbeta; Heterochromatin protein 1 homolog beta; HP1 beta; Heterochromatin protein p25; M31; Modifier 1 protein; p25beta;)
genome : 46,147,414 - 46,178,560 (31,147)
query : 1 - 2,422 (2,422/2,422)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013936)
HIX0013936
HIT000219429
(
U35451
)
(Chromobox protein homolog 1; HP1Hsbeta; Heterochromatin protein 1 homolog beta; HP1 beta; Heterochromatin protein p25; M31; Modifier 1 protein; p25beta;)
genome : 46,147,423 - 46,178,800 (31,378)
query : 9 - 2,148 (2,140/2,148)
5 exons
identity = 0.996
3'(0.996;1.000;1.000;0.994;0.994)5'
coverage = 0.996
InterPro :
IPR000953 : Chromo/chromo shadow domain
IPR008251 : Chromo shadow domain
IPR016197 : Chromo domain-like
IPR017984 : Chromo domain subgroup
IPR023779 : Chromo domain, conserved site
IPR023780 : Chromo domain
GO :
0005634 : Cellular Component : nucleus
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013936)
HIX0013936
HIT000431481
(
AK312615
)
(Chromobox protein homolog 1; HP1Hsbeta; Heterochromatin protein 1 homolog beta; HP1 beta; Heterochromatin protein p25; M31; Modifier 1 protein; p25beta;)
genome : 46,148,797 - 46,178,822 (30,026)
query : 1 - 788 (788/788)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.995)5'
coverage = 1.000
InterPro :
IPR000953 : Chromo/chromo shadow domain
IPR008251 : Chromo shadow domain
IPR016197 : Chromo domain-like
IPR017984 : Chromo domain subgroup
IPR023779 : Chromo domain, conserved site
IPR023780 : Chromo domain
GO :
0005634 : Cellular Component : nucleus
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013936)
HIX0013936
HIT000267616
(
CR456766
)
(Chromobox protein homolog 1; HP1Hsbeta; Heterochromatin protein 1 homolog beta; HP1 beta; Heterochromatin protein p25; M31; Modifier 1 protein; p25beta;)
genome : 46,148,797 - 46,154,366 (5,570)
query : 1 - 558 (558/558)
4 exons
identity = 0.998
3'(0.993;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000953 : Chromo/chromo shadow domain
IPR008251 : Chromo shadow domain
IPR016197 : Chromo domain-like
IPR017984 : Chromo domain subgroup
IPR023779 : Chromo domain, conserved site
IPR023780 : Chromo domain
GO :
0005634 : Cellular Component : nucleus
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013936)
HIX0013936
HIT000692913 (
ENST00000581003
)
(Chromobox protein homolog 1; HP1Hsbeta; Heterochromatin protein 1 homolog beta; HP1 beta; Heterochromatin protein p25; M31; Modifier 1 protein; p25beta;)
genome : 46,148,834 - 46,178,741 (29,908)
query : 1 - 812 (812/812)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013936)
HIX0013936
HIT000504175 (
ENST00000402583
)
(Chromobox protein homolog 1; HP1Hsbeta; Heterochromatin protein 1 homolog beta; HP1 beta; Heterochromatin protein p25; M31; Modifier 1 protein; p25beta;)
genome : 46,148,861 - 46,178,664 (29,804)
query : 1 - 578 (578/578)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013936)
HIX0013936
HIT000598717 (
ENST00000495350
)
(Chromobox protein homolog 1; HP1Hsbeta; Heterochromatin protein 1 homolog beta; HP1 beta; Heterochromatin protein p25; M31; Modifier 1 protein; p25beta;)
genome : 46,152,288 - 46,154,405 (2,118)
query : 19 - 550 (532/550)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.967
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013936)
HIX0013936
HIT000713704_01 (
ENST00000601969
)
(Chromobox protein homolog 1; HP1Hsbeta; Heterochromatin protein 1 homolog beta; HP1 beta; Heterochromatin protein p25; M31; Modifier 1 protein; p25beta;)
genome : 46,152,367 - 46,154,366 (2,000)
query : 1 - 415 (415/427)
3 exons
identity = 0.966
3'(0.979;0.972;0.950)5'
coverage = 0.972
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013936)
HIX0013936
HIT000548242_02 (
ENST00000450308
)
(Chromobox protein homolog 1; HP1Hsbeta; Heterochromatin protein 1 homolog beta; HP1 beta; Heterochromatin protein p25; M31; Modifier 1 protein; p25beta;)
genome : 46,152,367 - 46,154,365 (1,999)
query : 1 - 414 (414/426)
3 exons
identity = 0.966
3'(0.979;0.972;0.950)5'
coverage = 0.972
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013936)
HIX0013936
HIT000712365_01 (
ENST00000600622
)
(Chromobox protein homolog 1; HP1Hsbeta; Heterochromatin protein 1 homolog beta; HP1 beta; Heterochromatin protein p25; M31; Modifier 1 protein; p25beta;)
genome : 46,152,367 - 46,154,365 (1,999)
query : 1 - 414 (414/426)
3 exons
identity = 0.966
3'(0.979;0.972;0.950)5'
coverage = 0.972
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013936)
HIX0013936
HIT000542619 (
ENST00000444685
)
(Chromobox protein homolog 1; HP1Hsbeta; Heterochromatin protein 1 homolog beta; HP1 beta; Heterochromatin protein p25; M31; Modifier 1 protein; p25beta;)
genome : 46,153,353 - 46,177,944 (24,592)
query : 1 - 541 (541/544)
4 exons
identity = 0.994
3'(0.984;1.000;1.000;1.000)5'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013936)
HIX0039390
HIT000086167
(
BC002821
)
Representative transcript
(Conserved hypothetical protein.)
genome : 46,178,129 - 46,179,311 (1,183)
query : 10 - 1,192 (1,183/1,218)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, extr 2, cyto_nucl 1.33333, extr_plas 1.33333,
cyto_pero 1.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039390)
HIX0013937
HIT000693204 (
ENST00000581298
)
(Sorting nexin-11;)
genome : 46,180,719 - 46,196,526 (15,808)
query : 1 - 563 (563/563)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 13.5, cyto 9, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
HIX0013937
HIT000016719
(
AK091852
)
Representative transcript
(Sorting nexin-11;)
genome : 46,184,911 - 46,200,105 (15,195)
query : 1 - 2,300 (2,300/2,300)
8 exons
identity = 0.998
5'(0.986;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 1.000
InterPro :
IPR001683 : Phox homologous domain
IPR028655 : Sorting nexin-11
GO :
0006886 : Biological Process : intracellular protein transport
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 12.5, extr 8, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK076332
Danio
sp. (Zebrafish) : BC079508
Bos
sp. (Cow) : BC123805
Equus
sp. (Horse) : ENSECAT00000008386
Macaca
sp. (Macaque) : ENSMMUT00000029058
Oryzias
sp. (Medaka) : ENSORLT00000015479
Pongo
sp. (Orangutan) : ENSPPYT00000010372
Tetraodon
sp. (Tetraodon) : GSTENT00019150001
Takifugu
sp. (Fugu) : SINFRUT00000175082
Danio
sp. (Zebrafish) : XM_001337390
Monodelphis
sp. (Opossum) : XM_001372810
Pan
sp. (Chimpanzee) : XM_511934
Canis
sp. (Dog) : XM_537664
HIX0013937
HIT000490719
(
AK296095
)
(Sorting nexin-11;)
genome : 46,184,911 - 46,199,497 (14,587)
query : 1 - 1,601 (1,601/1,601)
5 exons
identity = 0.998
5'(0.993;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001683 : Phox homologous domain
IPR028655 : Sorting nexin-11
GO :
0006886 : Biological Process : intracellular protein transport
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16.6667, cyto 10, cyto_pero 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
HIX0013937
HIT000550793 (
ENST00000452859
)
(Sorting nexin-11;)
genome : 46,184,911 - 46,199,497 (14,587)
query : 1 - 1,601 (1,601/1,601)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.1667, nucl 16, cyto 10, cyto_pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
HIX0013937
HIT000499987
(
AK316374
)
(Sorting nexin-10 isoform 2.)
genome : 46,184,911 - 46,199,170 (14,260)
query : 1 - 1,200 (1,200/1,200)
7 exons
identity = 0.998
5'(0.979;1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001683 : Phox homologous domain
IPR028655 : Sorting nexin-11
GO :
0006886 : Biological Process : intracellular protein transport
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 9, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
HIX0013937
HIT000692139 (
ENST00000580219
)
(Sorting nexin-10 isoform 2.)
genome : 46,184,911 - 46,199,170 (14,260)
query : 1 - 1,200 (1,200/1,200)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 9, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
HIX0013937
HIT000690799 (
ENST00000578861
)
(Sorting nexin-10 isoform 2.)
genome : 46,184,911 - 46,196,370 (11,460)
query : 1 - 571 (571/571)
7 exons
identity = 0.989
5'(1.000;1.000;1.000;0.977;0.969;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 6, extr 3, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
HIX0013937
HIT000476861 (
ENST00000393405
)
(Sorting nexin-11;)
genome : 46,184,920 - 46,200,436 (15,517)
query : 1 - 2,733 (2,733/2,733)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 12.5, extr 8, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
HIX0013937
HIT000007206
(
AK023932
)
(Sorting nexin-11;)
genome : 46,184,920 - 46,200,105 (15,186)
query : 1 - 2,402 (2,402/2,402)
8 exons
identity = 0.998
5'(0.993;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR001683 : Phox homologous domain
IPR028655 : Sorting nexin-11
GO :
0006886 : Biological Process : intracellular protein transport
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 12.5, extr 8, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
HIX0013937
HIT000213528 (
NM_152244
)
(Sorting nexin-11;)
genome : 46,184,920 - 46,200,105 (15,186)
query : 1 - 2,402 (2,402/2,402)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 12.5, extr 8, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
HIX0013937
HIT000692785 (
ENST00000580875
)
(Hypothetical short protein.)
genome : 46,184,922 - 46,189,817 (4,896)
query : 1 - 704 (704/704)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 3.5, cyto_nucl 3.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
HIX0013937
HIT000070338
(
AF121861
)
(Sorting nexin-11;)
genome : 46,184,947 - 46,200,105 (15,159)
query : 20 - 2,333 (2,314/2,333)
7 exons
identity = 0.997
5'(0.996;1.000;1.000;1.000;1.000;1.000;0.996)3'
coverage = 0.992
InterPro :
IPR001683 : Phox homologous domain
IPR028655 : Sorting nexin-11
GO :
0006886 : Biological Process : intracellular protein transport
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 12.5, extr 8, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
HIX0013937
HIT000491193
(
AK296569
)
(Sorting nexin-11;)
genome : 46,184,938 - 46,199,248 (14,311)
query : 1 - 1,426 (1,426/1,426)
7 exons
identity = 0.998
5'(0.996;1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR001683 : Phox homologous domain
IPR028655 : Sorting nexin-11
GO :
0006886 : Biological Process : intracellular protein transport
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 8, cyto_nucl 6.66667, cyto 5.5,
nucl 4.5, cyto_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
HIX0013937
HIT000537291 (
ENST00000439357
)
(Sorting nexin-11;)
genome : 46,184,938 - 46,199,248 (14,311)
query : 1 - 1,426 (1,426/1,426)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 8, cyto_nucl 6.66667, cyto 5.5,
nucl 4.5, cyto_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
HIX0013937
HIT000693607 (
ENST00000581705
)
(Sorting nexin-11;)
genome : 46,184,938 - 46,199,248 (14,311)
query : 1 - 1,426 (1,426/1,426)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 8, cyto_nucl 6.66667, cyto 5.5,
nucl 4.5, cyto_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
HIX0013937
HIT000204300 (
NM_013323
)
(Sorting nexin-11;)
genome : 46,184,947 - 46,200,105 (15,159)
query : 1 - 2,315 (2,315/2,315)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 12.5, extr 8, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
HIX0013937
HIT000312814 (
ENST00000359238
)
(Sorting nexin-11;)
genome : 46,184,947 - 46,200,105 (15,159)
query : 1 - 2,315 (2,315/2,315)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 12.5, extr 8, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
HIX0013937
HIT000695201 (
ENST00000583320
)
(Sorting nexin-11;)
genome : 46,184,965 - 46,198,650 (13,686)
query : 1 - 965 (965/965)
8 exons
identity = 0.994
5'(1.000;1.000;1.000;0.977;0.969;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10, cyto_mito 10, mito 9.5, cyto 8.5,
nucl 7, cyto_pero 6.16667, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
HIX0013937
HIT000337325
(
BC103721
)
(Sorting nexin-11;)
genome : 46,185,141 - 46,200,106 (14,966)
query : 1 - 2,122 (2,122/2,139)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001683 : Phox homologous domain
IPR028655 : Sorting nexin-11
GO :
0006886 : Biological Process : intracellular protein transport
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 12.5, extr 8, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
HIX0013937
HIT000493175
(
AK298551
)
(Sorting nexin-10 isoform 2.)
genome : 46,185,150 - 46,199,249 (14,100)
query : 1 - 1,282 (1,282/1,282)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001683 : Phox homologous domain
IPR028655 : Sorting nexin-11
GO :
0006886 : Biological Process : intracellular protein transport
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 9, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
HIX0013937
HIT000694002 (
ENST00000582104
)
(Sorting nexin-10 isoform 2.)
genome : 46,185,150 - 46,199,249 (14,100)
query : 1 - 1,282 (1,282/1,282)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 9, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
HIX0013937
HIT000696206 (
ENST00000584335
)
(Sorting nexin-11;)
genome : 46,185,256 - 46,198,820 (13,565)
query : 1 - 922 (922/922)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 12, extr 9, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
HIX0013937
HIT000029907
(
BC000768
)
(Sorting nexin-11;)
genome : 46,188,063 - 46,200,106 (12,044)
query : 5 - 2,133 (2,129/2,151)
7 exons
identity = 0.999
5'(0.985;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.998
InterPro :
IPR001683 : Phox homologous domain
IPR028655 : Sorting nexin-11
GO :
0006886 : Biological Process : intracellular protein transport
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 12.5, extr 8, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
HIX0013937
HIT000694372 (
ENST00000582481
)
(Sorting nexin-11;)
genome : 46,189,311 - 46,196,541 (7,231)
query : 1 - 627 (627/627)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13, cyto 9.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
HIX0013937
HIT000099643
(
BT006723
)
(Sorting nexin-11;)
genome : 46,189,406 - 46,198,868 (9,463)
query : 1 - 811 (811/813)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR001683 : Phox homologous domain
IPR028655 : Sorting nexin-11
GO :
0006886 : Biological Process : intracellular protein transport
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 12.5, extr 8, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
HIX0013937
HIT000689265 (
ENST00000577310
)
(Sorting nexin-11;)
genome : 46,189,928 - 46,190,925 (998)
query : 1 - 358 (358/358)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 16, cyto 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013937)
HIX0027189
HIT000053262
(
BC047870
)
Representative transcript
(Src kinase-associated phosphoprotein 1; Src family-associated phosphoprotein 1; Src kinase-associated phosphoprotein of 55 kDa; SKAP-55; pp55;)
genome : 46,210,802 - 46,507,566 (296,765)
query : 1 - 1,545 (1,545/1,618)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001452 : SH3 domain
IPR001849 : Pleckstrin homology domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, nucl 11, cyto 10, cysk 6, mito 2,
lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027189)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK137942
Rattus
sp. (Rat) : BC097931
Danio
sp. (Zebrafish) : BC129161
Oryzias
sp. (Medaka) : ENSORLT00000009602
Pongo
sp. (Orangutan) : ENSPPYT00000010373
Tetraodon
sp. (Tetraodon) : GSTENT00019149001
Takifugu
sp. (Fugu) : SINFRUT00000138808
Macaca
sp. (Macaque) : XM_001085653
Monodelphis
sp. (Opossum) : XM_001372869
Equus
sp. (Horse) : XM_001499144
Gallus
sp. (Chicken) : XM_423025
Pan
sp. (Chimpanzee) : XM_523821
Canis
sp. (Dog) : XM_537665
Bos
sp. (Cow) : XM_583265
HIX0027189
HIT000095478
(
BC039040
)
(Src kinase-associated phosphoprotein 1; Src family-associated phosphoprotein 1; Src kinase-associated phosphoprotein of 55 kDa; SKAP-55; pp55;)
genome : 46,210,807 - 46,507,637 (296,831)
query : 1 - 1,687 (1,687/1,751)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 10, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027189)
HIX0027189
HIT000200526 (
NM_003726
)
(Src kinase-associated phosphoprotein 1; Src family-associated phosphoprotein 1; Src kinase-associated phosphoprotein of 55 kDa; SKAP-55; pp55;)
genome : 46,210,802 - 46,507,594 (296,793)
query : 1 - 1,576 (1,576/1,601)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, nucl 11, cyto 10, cysk 6, mito 2,
lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027189)
HIX0027189
HIT000397728 (
NM_001075099
)
(Src kinase-associated phosphoprotein 1; Src family-associated phosphoprotein 1; Src kinase-associated phosphoprotein of 55 kDa; SKAP-55; pp55;)
genome : 46,210,802 - 46,507,594 (296,793)
query : 1 - 1,573 (1,573/1,598)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, nucl 11, cyto 10, cysk 6, mito 2,
lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027189)
HIX0027189
HIT000130283 (
ENST00000336915
)
(Src kinase-associated phosphoprotein 1; Src family-associated phosphoprotein 1; Src kinase-associated phosphoprotein of 55 kDa; SKAP-55; pp55;)
genome : 46,210,802 - 46,507,552 (296,751)
query : 1 - 1,534 (1,534/1,534)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, nucl 11, cyto 10, cysk 6, mito 2,
lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027189)
HIX0027189
HIT000696574 (
ENST00000584709
)
(Src kinase-associated phosphoprotein 1 isoform 2.)
genome : 46,210,807 - 46,507,637 (296,831)
query : 1 - 1,687 (1,687/1,687)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 10, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027189)
HIX0027189
HIT000325640
(
Y11215
)
(Src kinase-associated phosphoprotein 1; Src family-associated phosphoprotein 1; Src kinase-associated phosphoprotein of 55 kDa; SKAP-55; pp55;)
genome : 46,210,807 - 46,507,552 (296,746)
query : 1 - 1,524 (1,524/1,524)
13 exons
identity = 0.993
3'(0.981;1.000;1.000;1.000;1.000;1.000;0.976;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR001849 : Pleckstrin homology domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, nucl 11, cyto 10, cysk 6, mito 2,
lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027189)
HIX0027189
HIT000691404 (
ENST00000579476
)
(Src kinase-associated phosphoprotein 1; Src family-associated phosphoprotein 1; Src kinase-associated phosphoprotein of 55 kDa; SKAP-55; pp55;)
genome : 46,210,808 - 46,240,032 (29,225)
query : 1 - 682 (682/682)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 11.5, cyto_nucl 9.5, nucl 6.5,
extr_plas 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027189)
HIX0027189
HIT000695722 (
ENST00000583844
)
(Conserved hypothetical protein.)
genome : 46,210,808 - 46,214,696 (3,889)
query : 1 - 563 (563/563)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 6, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027189)
HIX0027189
HIT000423615
(
AK290818
)
(Src kinase-associated phosphoprotein 1; Src family-associated phosphoprotein 1; Src kinase-associated phosphoprotein of 55 kDa; SKAP-55; pp55;)
genome : 46,214,300 - 46,507,581 (293,282)
query : 1 - 1,477 (1,477/1,477)
12 exons
identity = 0.998
3'(1.000;1.000;1.000;0.995;0.984;0.992;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR001849 : Pleckstrin homology domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 12, cyto 10, cysk 5, mito 2,
lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027189)
HIX0027189
HIT000696786 (
ENST00000584924
)
(Src kinase-associated phosphoprotein 1; Src family-associated phosphoprotein 1; Src kinase-associated phosphoprotein of 55 kDa; SKAP-55; pp55;)
genome : 46,214,300 - 46,507,581 (293,282)
query : 1 - 1,477 (1,477/1,477)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, nucl 11, cyto 10, cysk 6, mito 2,
lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027189)
HIX0027189
HIT000693306 (
ENST00000581400
)
(Src kinase-associated phosphoprotein 1; Src family-associated phosphoprotein 1; Src kinase-associated phosphoprotein of 55 kDa; SKAP-55; pp55;)
genome : 46,214,587 - 46,423,367 (208,781)
query : 1 - 787 (787/787)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, extr 12, cyto_nucl 10, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027189)
HIX0027299
HIT000049295
(
AK130024
)
Representative transcript
(Conserved hypothetical protein.)
genome : 46,220,572 - 46,222,536 (1,965)
query : 1 - 1,965 (1,965/1,965)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, extr 11, cyto_nucl 10.8333, cyto 4.5,
cyto_pero 3.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027299)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001173102
HIX0173951
HIT000506870 (
ENST00000408812
)
(Non-protein coding transcript.)
genome : 46,233,789 - 46,233,873 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173951)
HIX0173951
HIT000658523 (
NR_031607
)
(Non-protein coding transcript.)
genome : 46,233,789 - 46,233,873 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173951)
HIX0027189
HIT000691265 (
ENST00000579336
)
(Src kinase-associated phosphoprotein 1; Src family-associated phosphoprotein 1; Src kinase-associated phosphoprotein of 55 kDa; SKAP-55; pp55;)
genome : 46,257,454 - 46,262,541 (5,088)
query : 1 - 678 (678/678)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, nucl 3, cyto_pero 3, cyto_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027189)
HIX0027189
HIT000693325 (
ENST00000581419
)
(Src kinase-associated phosphoprotein 1; Src family-associated phosphoprotein 1;)
genome : 46,257,470 - 46,423,327 (165,858)
query : 1 - 696 (696/696)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 12, nucl 6.5, extr 6, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027189)
HIX0224913
HIT000694140 (
ENST00000582246
)
(Conserved hypothetical protein.)
genome : 46,263,300 - 46,281,891 (18,592)
query : 1 - 687 (687/687)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224913)
HIX0039667
HIT000216388
(
S71020
)
Representative transcript
(Hypothetical short protein.)
genome : 46,371,699 - 46,385,037 (13,339)
query : 7 - 526 (520/543)
2 exons
identity = 0.987
5'(0.978;0.991)3'
coverage = 0.987
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 11.5, extr 5, mito 4, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039667)
HIX0039667
HIT000519544 (
ENST00000421610
)
(Hypothetical short protein.)
genome : 46,371,707 - 46,385,191 (13,485)
query : 1 - 670 (670/670)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 13, cyto_nucl 9.5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039667)
HIX0039667
HIT000693268 (
ENST00000581362
)
(Hypothetical short protein.)
genome : 46,384,690 - 46,386,124 (1,435)
query : 1 - 902 (902/902)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, extr 12, cyto_nucl 11.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039667)
HIX0224817
HIT000690969 (
ENST00000579033
)
(Conserved hypothetical protein.)
genome : 46,454,624 - 46,457,732 (3,109)
query : 1 - 333 (333/333)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224817)
HIX0019379
HIT000013867
(
AK057253
)
Representative transcript
(Conserved hypothetical protein.)
genome : 46,522,195 - 46,543,396 (21,202)
query : 1 - 2,259 (2,259/2,259)
6 exons
identity = 0.997
5'(1.000;0.967;1.000;1.000;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 11, cyto 9, mito 7, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019379)
HIX0019379
HIT000691892 (
ENST00000579972
)
(Conserved hypothetical protein.)
genome : 46,537,732 - 46,543,402 (5,671)
query : 1 - 701 (701/701)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 13, cyto 8.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019379)
HIX0225204
HIT000495048
(
AK300424
)
Representative transcript
(Integrin beta-3 subunit family protein.)
genome : 45,331,263 - 45,421,658 (90,396)
query : 1 - 2,785 (2,785/2,785)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002035 : von Willebrand factor, type A
IPR002369 : Integrin beta subunit, N-terminal
IPR012896 : Integrin beta subunit, tail
IPR014836 : Integrin beta subunit, cytoplasmic domain
IPR015812 : Integrin beta subunit
IPR016201 : Plexin-like fold
IPR027068 : Integrin beta-3 subunit
GO :
0004872 : Molecular Function : receptor activity
0007044 : Biological Process : cell-substrate junction assembly
0007155 : Biological Process : cell adhesion
0007160 : Biological Process : cell-matrix adhesion
0007229 : Biological Process : integrin-mediated signaling pathway
0007275 : Biological Process : multicellular organismal development
0008305 : Cellular Component : integrin complex
0016020 : Cellular Component : membrane
0030334 : Biological Process : regulation of cell migration
0060055 : Biological Process : angiogenesis involved in wound healing
0070527 : Biological Process : platelet aggregation
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10.5, nucl 5.5, E.R. 4, plas 3,
pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225204)
HIX0225204
HIT000533927 (
ENST00000435993
)
(Integrin beta-3 subunit family protein.)
genome : 45,331,263 - 45,421,658 (90,396)
query : 1 - 2,785 (2,785/2,785)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10.5, nucl 5.5, E.R. 4, plas 3,
pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225204)
HIX0225204
HIT000673868 (
ENST00000560629
)
(Integrin beta-3 subunit family protein.)
genome : 45,331,263 - 45,421,658 (90,396)
query : 1 - 2,785 (2,785/2,785)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10.5, nucl 5.5, E.R. 4, plas 3,
pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225204)
HIX0013922
HIT000626403 (
ENST00000527200
)
(Puromycin-sensitive aminopeptidase; PSA; EC=3.4.11.14; Cytosol alanyl aminopeptidase; AAP-S;)
genome : 45,600,306 - 45,670,039 (69,734)
query : 1 - 5,074 (5,074/5,074)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.14
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 12.5, nucl 5, mito 4, extr 2,
cysk 2, E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013922)
HIX0013922
HIT000624283 (
ENST00000525037
)
(Alanine/arginine aminopeptidase; EC=3.4.11.-;)
genome : 45,600,311 - 45,669,911 (69,601)
query : 1 - 1,406 (1,406/1,406)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 10, mito 9, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013922)
HIX0013922
HIT000497661
(
AK303037
)
Representative transcript
(Puromycin-sensitive aminopeptidase; PSA; EC=3.4.11.14; Cytosol alanyl aminopeptidase; AAP-S;)
genome : 45,600,323 - 45,699,372 (99,050)
query : 1 - 2,864 (2,864/2,864)
24 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.971;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.14
InterPro :
IPR001930 : Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase
IPR014782 : Peptidase M1, membrane alanine aminopeptidase, N-terminal
IPR024571 : ERAP1-like C-terminal domain
GO :
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22.5, cyto_mito 12.3333, mito_pero 12.3333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013922)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB062596
Macaca
sp. (Macaque) : AB220536
Gallus
sp. (Chicken) : AJ851657
Mus
sp. (Mouse) : BC098212
Oryzias
sp. (Medaka) : ENSORLT00000000144
Takifugu
sp. (Fugu) : SINFRUT00000159528
Pan
sp. (Chimpanzee) : XM_001173616
Monodelphis
sp. (Opossum) : XM_001372099
Equus
sp. (Horse) : XM_001498919
Canis
sp. (Dog) : XM_537659
Bos
sp. (Cow) : XM_869645
HIX0013922
HIT000629325 (
ENST00000530173
)
(Puromycin-sensitive aminopeptidase; PSA; EC=3.4.11.14; Cytosol alanyl aminopeptidase; AAP-S;)
genome : 45,600,323 - 45,699,372 (99,050)
query : 1 - 2,864 (2,864/2,864)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.14
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22.5, cyto_mito 12.3333, mito_pero 12.3333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013922)
HIX0013922
HIT000325355
(
Y07701
)
(Puromycin-sensitive aminopeptidase; PSA; EC=3.4.11.14; Cytosol alanyl aminopeptidase; AAP-S;)
genome : 45,608,604 - 45,699,993 (91,390)
query : 210 - 3,740 (3,531/3,747)
23 exons
identity = 0.997
5'(0.991;1.000;1.000;1.000;0.981;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994)3'
coverage = 0.942
EC number :
EC 3.4.11.14
InterPro :
IPR001930 : Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase
IPR014782 : Peptidase M1, membrane alanine aminopeptidase, N-terminal
IPR024571 : ERAP1-like C-terminal domain
GO :
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29.5, cyto_mito 17.3333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013922)
HIX0013922
HIT000123036 (
ENST00000322157
)
(Puromycin-sensitive aminopeptidase; PSA; EC=3.4.11.14; Cytosol alanyl aminopeptidase; AAP-S;)
genome : 45,608,430 - 45,700,642 (92,213)
query : 1 - 4,353 (4,353/4,353)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.14
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29.5, cyto_mito 17.3333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013922)
HIX0013922
HIT000202916 (
NM_006310
)
(Puromycin-sensitive aminopeptidase; PSA; EC=3.4.11.14; Cytosol alanyl aminopeptidase; AAP-S;)
genome : 45,608,444 - 45,700,642 (92,199)
query : 1 - 4,339 (4,339/4,364)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.14
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29.5, cyto_mito 17.3333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013922)
HIX0013922
HIT000021564
(
AK096709
)
(Puromycin-sensitive aminopeptidase; PSA; EC=3.4.11.14; Cytosol alanyl aminopeptidase; AAP-S;)
genome : 45,608,557 - 45,700,636 (92,080)
query : 1 - 2,811 (2,811/2,861)
23 exons
identity = 0.994
5'(0.953;0.978;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.991;
1.000;1.000;1.000;0.995;0.993;1.000;1.000;
0.974;0.996)3'
coverage = 1.000
EC number :
EC 3.4.11.14
InterPro :
IPR001930 : Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase
IPR014782 : Peptidase M1, membrane alanine aminopeptidase, N-terminal
IPR024571 : ERAP1-like C-terminal domain
GO :
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 8, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013922)
HIX0013922
HIT000020732
(
AK095877
)
(Puromycin-sensitive aminopeptidase; PSA; EC=3.4.11.14; Cytosol alanyl aminopeptidase; AAP-S;)
genome : 45,608,639 - 45,700,635 (91,997)
query : 1 - 2,241 (2,241/2,241)
18 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;0.992)3'
coverage = 1.000
EC number :
EC 3.4.11.14
InterPro :
IPR001930 : Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase
IPR014782 : Peptidase M1, membrane alanine aminopeptidase, N-terminal
IPR024571 : ERAP1-like C-terminal domain
GO :
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 31, cyto_mito 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013922)
HIX0013922
HIT000626501 (
ENST00000527298
)
(Puromycin-sensitive aminopeptidase; PSA; EC=3.4.11.14; Cytosol alanyl aminopeptidase; AAP-S;)
genome : 45,608,648 - 45,670,046 (61,399)
query : 1 - 1,569 (1,569/1,569)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.14
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 17, cyto 9, cyto_nucl 7, extr 3, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013922)
HIX0013922
HIT000491511
(
AK296887
)
(Puromycin-sensitive aminopeptidase; PSA; EC=3.4.11.14; Cytosol alanyl aminopeptidase; AAP-S;)
genome : 45,608,693 - 45,699,483 (90,791)
query : 1 - 2,823 (2,823/2,823)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.14
InterPro :
IPR001930 : Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase
IPR014782 : Peptidase M1, membrane alanine aminopeptidase, N-terminal
IPR024571 : ERAP1-like C-terminal domain
GO :
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12.5, nucl 4, mito 4, extr 3,
mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013922)
HIX0013922
HIT000643705 (
ENST00000544660
)
(Puromycin-sensitive aminopeptidase; PSA; EC=3.4.11.14; Cytosol alanyl aminopeptidase; AAP-S;)
genome : 45,608,693 - 45,699,483 (90,791)
query : 1 - 2,823 (2,823/2,823)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.14
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12.5, nucl 4, mito 4, extr 3,
mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013922)
HIX0013922
HIT000244711
(
AJ132583
)
(Puromycin-sensitive aminopeptidase; PSA; EC=3.4.11.14; Cytosol alanyl aminopeptidase; AAP-S;)
genome : 45,608,714 - 45,700,618 (91,905)
query : 1 - 4,050 (4,050/4,071)
23 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.997)3'
coverage = 1.000
EC number :
EC 3.4.11.14
InterPro :
IPR001930 : Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase
IPR014782 : Peptidase M1, membrane alanine aminopeptidase, N-terminal
IPR024571 : ERAP1-like C-terminal domain
GO :
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29.5, cyto_mito 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013922)
HIX0013922
HIT000261856
(
BC065294
)
(Puromycin-sensitive aminopeptidase; PSA; EC=3.4.11.14; Cytosol alanyl aminopeptidase; AAP-S;)
genome : 45,608,755 - 45,699,460 (90,706)
query : 1 - 2,846 (2,846/2,860)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.14
InterPro :
IPR001930 : Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase
IPR014782 : Peptidase M1, membrane alanine aminopeptidase, N-terminal
IPR024571 : ERAP1-like C-terminal domain
GO :
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013922)
HIX0013922
HIT000491731
(
AK297107
)
(Puromycin-sensitive aminopeptidase; PSA; EC=3.4.11.14; Cytosol alanyl aminopeptidase; AAP-S;)
genome : 45,623,293 - 45,699,483 (76,191)
query : 1 - 2,684 (2,684/2,684)
22 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995;1.000;0.982;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.14
InterPro :
IPR001930 : Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase
IPR014782 : Peptidase M1, membrane alanine aminopeptidase, N-terminal
IPR024571 : ERAP1-like C-terminal domain
GO :
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12, mito 6, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013922)
HIX0013922
HIT000714521 (
ENST00000602788
)
(Puromycin-sensitive aminopeptidase; PSA; EC=3.4.11.14; Cytosol alanyl aminopeptidase; AAP-S;)
genome : 45,625,556 - 45,670,039 (44,484)
query : 1 - 4,698 (4,698/4,698)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.14
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 12.5, nucl 5, mito 4, extr 2,
cysk 2, E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013922)
HIX0013922
HIT000633859 (
ENST00000534814
)
(Puromycin-sensitive aminopeptidase; PSA; EC=3.4.11.14; Cytosol alanyl aminopeptidase; AAP-S;)
genome : 45,663,080 - 45,669,911 (6,832)
query : 1 - 512 (512/512)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.14
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 17, cyto 8, cyto_nucl 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013922)
HIX0013922
HIT000488074
(
AK293450
)
(Puromycin-sensitive aminopeptidase; PSA; EC=3.4.11.14; Cytosol alanyl aminopeptidase; AAP-S;)
genome : 45,663,512 - 45,699,459 (35,948)
query : 3 - 2,088 (2,086/2,088)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 3.4.11.14
InterPro :
IPR001930 : Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase
IPR014782 : Peptidase M1, membrane alanine aminopeptidase, N-terminal
IPR024571 : ERAP1-like C-terminal domain
GO :
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14, nucl 6.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013922)
HIX0013922
HIT000488619
(
AK293995
)
(Puromycin-sensitive aminopeptidase; PSA; EC=3.4.11.14; Cytosol alanyl aminopeptidase; AAP-S;)
genome : 45,663,702 - 45,699,483 (35,782)
query : 3 - 2,094 (2,092/2,094)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.999
EC number :
EC 3.4.11.14
InterPro :
IPR001930 : Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase
IPR014782 : Peptidase M1, membrane alanine aminopeptidase, N-terminal
GO :
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013922)
HIX0013922
HIT000629660 (
ENST00000530514
)
(Puromycin-sensitive aminopeptidase; PSA; EC=3.4.11.14; Cytosol alanyl aminopeptidase; AAP-S;)
genome : 45,663,702 - 45,699,483 (35,782)
query : 1 - 2,092 (2,092/2,092)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.14
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013922)
HIX0013932
HIT000694156 (
ENST00000582262
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,022,924 - 46,051,804 (28,881)
query : 21 - 575 (555/575)
7 exons
identity = 0.987
5'(1.000;1.000;1.000;1.000;1.000;0.971;0.897)3'
coverage = 0.965
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 7.5, cyto_nucl 7.5, nucl 6.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000691557 (
ENST00000579632
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,045,176 - 46,052,703 (7,528)
query : 1 - 738 (738/738)
7 exons
identity = 0.991
5'(1.000;1.000;1.000;1.000;0.971;0.918;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto_nucl 9, nucl 8, cyto 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000495267
(
AK300643
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,047,900 - 46,059,138 (11,239)
query : 1 - 1,975 (1,975/1,975)
14 exons
identity = 0.995
5'(1.000;1.000;1.000;0.971;0.898;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;1.000)3'
coverage = 1.000
InterPro :
IPR008491 : Protein of unknown function DUF773
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 10, nucl 7, mito_pero 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000635753 (
ENST00000536708
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,047,900 - 46,059,138 (11,239)
query : 1 - 1,975 (1,975/1,975)
14 exons
identity = 0.996
5'(1.000;1.000;1.000;0.971;0.918;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 10, nucl 7, mito_pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000215391 (
NM_176096
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,048,322 - 46,059,152 (10,831)
query : 1 - 1,996 (1,996/1,996)
14 exons
identity = 0.997
5'(1.000;1.000;1.000;0.971;0.918;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14, nucl 7, cysk 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000131029 (
ENST00000338399
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,048,407 - 46,059,107 (10,701)
query : 1 - 1,866 (1,866/1,866)
14 exons
identity = 0.996
5'(1.000;1.000;1.000;0.971;0.918;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14, nucl 7, cysk 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000331167
(
AK223387
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,048,407 - 46,059,107 (10,701)
query : 1 - 1,866 (1,866/1,866)
14 exons
identity = 0.994
5'(1.000;1.000;1.000;0.971;0.918;0.994;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;0.993)3'
coverage = 1.000
InterPro :
IPR008491 : Protein of unknown function DUF773
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14, nucl 7, cysk 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000693610 (
ENST00000581708
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,048,442 - 46,052,632 (4,191)
query : 1 - 543 (543/543)
6 exons
identity = 0.987
5'(1.000;1.000;1.000;0.971;0.918;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 10, mito 7, cyto_pero 7, cyto_plas 7,
cyto_golg 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000691531 (
ENST00000579605
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,048,444 - 46,052,632 (4,189)
query : 1 - 560 (560/560)
7 exons
identity = 0.988
5'(1.000;1.000;1.000;0.971;0.918;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 12, cyto_nucl 11, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000006996
(
AK023722
)
Representative transcript
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,048,470 - 46,059,138 (10,669)
query : 15 - 1,848 (1,834/1,848)
14 exons
identity = 0.996
5'(1.000;1.000;1.000;0.971;0.918;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 0.992
InterPro :
IPR008491 : Protein of unknown function DUF773
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14, nucl 7, cysk 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171286
Mus
sp. (Mouse) : AK149765
Danio
sp. (Zebrafish) : BC071504
Bos
sp. (Cow) : BC119981
Pongo
sp. (Orangutan) : CR859269
Oryzias
sp. (Medaka) : ENSORLT00000015428
Tetraodon
sp. (Tetraodon) : GSTENT00019153001
Takifugu
sp. (Fugu) : SINFRUT00000139391
Monodelphis
sp. (Opossum) : XM_001372691
Equus
sp. (Horse) : XM_001499043
Pan
sp. (Chimpanzee) : XM_511931
Canis
sp. (Dog) : XM_537662
HIX0013932
HIT000074227
(
AF217982
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,048,470 - 46,059,138 (10,669)
query : 1 - 2,759 (2,759/2,828)
12 exons
identity = 0.997
5'(1.000;1.000;1.000;0.971;0.996;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto 7, mito 7, cyto_mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000695939 (
ENST00000584063
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,048,470 - 46,059,138 (10,669)
query : 1 - 2,759 (2,759/2,759)
12 exons
identity = 0.997
5'(1.000;1.000;1.000;0.971;0.996;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto 7, mito 7, cyto_mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000078004
(
AF343090
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,048,478 - 46,059,137 (10,660)
query : 1 - 1,826 (1,826/1,826)
14 exons
identity = 0.994
5'(1.000;1.000;1.000;0.971;0.918;1.000;1.000;
1.000;0.991;1.000;1.000;0.986;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008491 : Protein of unknown function DUF773
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14, nucl 7, cysk 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000693067 (
ENST00000581160
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,048,479 - 46,052,464 (3,986)
query : 1 - 490 (490/490)
6 exons
identity = 0.986
5'(1.000;1.000;1.000;0.971;0.918;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 10.5, cyto_nucl 8, nucl 2.5, mito 1,
pero 1, lyso 1, cysk 1, mito_pero 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000690467 (
ENST00000578525
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,048,488 - 46,052,918 (4,431)
query : 1 - 564 (564/564)
7 exons
identity = 0.988
5'(1.000;1.000;1.000;0.971;0.918;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 13.5, nucl 7.5, cysk 6, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000689614 (
ENST00000577664
)
(Conserved hypothetical protein.)
genome : 46,048,488 - 46,052,704 (4,217)
query : 1 - 558 (558/568)
6 exons
identity = 0.988
5'(1.000;1.000;1.000;0.971;0.918;1.000)3'
coverage = 0.982
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, extr 11, nucl 10.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000691106 (
ENST00000579175
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,048,489 - 46,054,137 (5,649)
query : 1 - 867 (867/867)
9 exons
identity = 0.992
5'(1.000;1.000;1.000;0.971;0.918;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cysk 13, cyto 11, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000069636
(
AF110322
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,048,491 - 46,059,134 (10,644)
query : 1 - 2,519 (2,519/2,538)
13 exons
identity = 0.996
5'(1.000;1.000;1.000;0.971;0.995;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, extr 8, cyto 6, mito 6, cyto_mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000697021 (
ENST00000585163
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,048,491 - 46,059,134 (10,644)
query : 1 - 2,519 (2,519/2,519)
13 exons
identity = 0.997
5'(1.000;1.000;1.000;0.971;0.996;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, extr 8, cyto 6, mito 6, cyto_mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000384404
(
AK225274
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,048,493 - 46,059,138 (10,646)
query : 1 - 2,609 (2,609/2,632)
13 exons
identity = 0.997
5'(1.000;1.000;1.000;0.971;0.995;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10, extr 9, cyto 7, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000692204 (
ENST00000580287
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,048,493 - 46,059,138 (10,646)
query : 1 - 2,609 (2,609/2,609)
13 exons
identity = 0.997
5'(1.000;1.000;1.000;0.971;0.996;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 10.5, cyto_nucl 9.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000264880
(
BC072435
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,048,496 - 46,059,138 (10,643)
query : 1 - 1,808 (1,808/1,890)
14 exons
identity = 0.996
5'(1.000;1.000;1.000;0.971;0.918;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR008491 : Protein of unknown function DUF773
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14, nucl 7, cysk 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000695063 (
ENST00000583182
)
(Conserved hypothetical protein.)
genome : 46,048,498 - 46,052,155 (3,658)
query : 1 - 709 (709/709)
5 exons
identity = 0.990
5'(1.000;1.000;1.000;0.971;0.990)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 12, cyto 11, nucl 7, extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000695244 (
ENST00000583363
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,048,501 - 46,052,047 (3,547)
query : 1 - 558 (558/558)
5 exons
identity = 0.988
5'(1.000;1.000;0.971;0.918;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 11, nucl 2, mito 2, golg 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000690080 (
ENST00000578134
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,048,509 - 46,052,997 (4,489)
query : 1 - 831 (831/831)
6 exons
identity = 0.992
5'(1.000;1.000;0.971;0.918;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 10.5, extr 5, cysk 3, nucl 2.5,
extr_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000695233 (
ENST00000583352
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,048,517 - 46,053,016 (4,500)
query : 1 - 901 (901/901)
6 exons
identity = 0.992
5'(1.000;1.000;0.971;0.918;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cysk 10, cyto_nucl 8.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000692306 (
ENST00000580391
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,048,522 - 46,059,100 (10,579)
query : 1 - 1,957 (1,957/1,957)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 9.5, cyto_nucl 7.5, mito 5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000034692
(
BC009957
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,048,726 - 46,059,132 (10,407)
query : 10 - 1,790 (1,781/1,832)
13 exons
identity = 0.996
5'(1.000;1.000;0.971;0.918;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 0.993
InterPro :
IPR008491 : Protein of unknown function DUF773
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14, nucl 7, cysk 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000059908
(
AB062433
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,048,726 - 46,059,144 (10,419)
query : 10 - 1,802 (1,793/1,816)
13 exons
identity = 0.996
5'(1.000;1.000;0.971;0.918;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.995
InterPro :
IPR008491 : Protein of unknown function DUF773
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14, nucl 7, cysk 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000696041 (
ENST00000584168
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,048,728 - 46,059,108 (10,381)
query : 1 - 2,684 (2,684/2,684)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11.5, extr 5, nucl 2.5,
extr_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000036255
(
BC013407
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,048,732 - 46,059,138 (10,407)
query : 1 - 2,706 (2,706/2,762)
11 exons
identity = 0.997
5'(1.000;1.000;0.971;0.994;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 10, nucl 8, cyto 8, extr_plas 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000002735
(
AK000260
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,051,961 - 46,059,147 (7,187)
query : 1 - 2,245 (2,245/2,262)
8 exons
identity = 0.998
5'(0.997;1.000;1.000;1.000;1.000;0.995;0.994;
0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 5, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0013932
HIT000694012 (
ENST00000582114
)
(CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; Protein HSF-27;)
genome : 46,053,827 - 46,058,075 (4,249)
query : 1 - 647 (647/647)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 8.5, cyto 7.5, nucl 4.5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013932)
HIX0194990
pHIT000029566 ( pHIT000029566 )
Representative transcript
(Hypothetical protein.)
genome : 45,146,694 - 45,150,563 (3,870)
query : 1 - 462 (462/462)
3 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194990)
CAGE tag :
H05BC21J0308,H05BC96P1213,H08BA51E0605
H21BA90A1814,H21BB47O1003
HIX0202635
pHIT000029568 ( pHIT000029568 )
Representative transcript
(Hypothetical protein.)
genome : 45,266,646 - 45,266,993 (348)
query : 1 - 348 (348/348)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202635)
CAGE tag :
H04BA76G1203,H05BB70M1902,H05BF89D2303
H06BA48P1405,H08BA11C2104
AC005670.1
45000001-45119261 F +
NCBI
AC068152.11
45119262-45188707 F -
NCBI
AC002558.2
45188708-45276266 F -
NCBI
AC087649.6
45276267-45294530 F -
NCBI
AC068234.8
45294531-45467807 F -
NCBI
AC040934.15
45467808-45571458 F +
NCBI
AC136360.6
45571459-45578739 F +
NCBI
AC025682.6
45578740-45734138 F -
NCBI
AC015674.12
45734139-45874353 F -
NCBI
AC003665.1
45874354-45933172 F -
NCBI
AC018521.8
45933173-46074583 F -
NCBI
AC004477.2
46074584-46168733 F +
NCBI
AC006468.10
46168734-46258575 F -
NCBI
AC027152.11
46258576-46365472 F -
NCBI
AC090627.4
46365473-46443397 F -
NCBI
AC036222.23
46443398-46589582 F -
NCBI
AC103702.3
46589583-46600000 F -
NCBI