bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0224210
HIT000691135 (
ENST00000579205
)
(Nucleotide-binding alpha-beta plait domain containing protein.)
genome : 55,484,173 - 55,704,663 (220,491)
query : 1 - 500 (500/500)
4 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27.5, mito_pero 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224210)
HIX0224210
HIT000691433 (
ENST00000579505
)
(RNA recognition motif domain containing protein.)
genome : 55,518,051 - 55,752,420 (234,370)
query : 1 - 577 (577/577)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224210)
HIX0224210
HIT000694660 (
ENST00000582772
)
(RNA recognition motif domain containing protein.)
genome : 55,521,848 - 55,674,311 (152,464)
query : 1 - 398 (398/398)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224210)
HIX0027245
HIT000046001
(
AK126128
)
Representative transcript
(Conserved hypothetical protein.)
genome : 55,525,579 - 55,527,652 (2,074)
query : 1 - 2,074 (2,074/2,074)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 10, cyto 5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027245)
HIX0014019
HIT000027980
(
AL833068
)
Representative transcript
(Conserved hypothetical protein.)
genome : 55,530,865 - 55,537,502 (6,638)
query : 1 - 6,636 (6,636/6,656)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 11.5, cyto 10.5, extr 4, pero 2,
cysk 2, extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014019)
HIX0039430
HIT000094072
(
BC035768
)
Representative transcript
(Conserved hypothetical protein.)
genome : 55,562,313 - 55,566,021 (3,709)
query : 12 - 3,717 (3,706/3,731)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 13.5, extr 10, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039430)
HIX0027318
HIT000050293
(
AK131022
)
Representative transcript
(Hypothetical short protein.)
genome : 55,599,609 - 55,600,958 (1,350)
query : 1 - 563 (563/563)
3 exons
identity = 0.998
3'(1.000;0.987;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto 8.5, cyto_nucl 7.5, nucl 5.5,
mito_pero 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027318)
HIX0027318
HIT000689145 (
ENST00000577189
)
(Hypothetical short protein.)
genome : 55,599,609 - 55,600,958 (1,350)
query : 1 - 563 (563/563)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto 8.5, cyto_nucl 7.5, nucl 5.5,
mito_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027318)
HIX0096707
HIT000390655
(
BC131753
)
Representative transcript
(Hypothetical protein.)
genome : 55,609,130 - 55,609,716 (587)
query : 6 - 594 (589/598)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 0.985
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, extr 8, cyto 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096707)
HIX0039465
HIT000096981
(
BC041941
)
Representative transcript
(Conserved hypothetical protein.)
genome : 55,658,391 - 55,660,831 (2,441)
query : 1 - 2,441 (2,441/2,455)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, cyto 8, mito 8, cyto_mito 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039465)
HIX0224210
HIT000689196 (
ENST00000577241
)
(Conserved hypothetical protein.)
genome : 55,674,264 - 55,693,992 (19,729)
query : 1 - 710 (710/710)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224210)
HIX0039414
HIT000091941
(
BC029915
)
Representative transcript
(Conserved hypothetical protein.)
genome : 55,678,227 - 55,685,773 (7,547)
query : 1 - 1,402 (1,402/1,476)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, extr 11, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039414)
HIX0039414
HIT000690601 (
ENST00000578662
)
(Hypothetical protein.)
genome : 55,678,217 - 55,685,773 (7,557)
query : 1 - 1,412 (1,412/1,412)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, extr 11, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039414)
HIX0224210
HIT000056586
(
BX647939
)
Representative transcript
(Conserved hypothetical protein.)
genome : 55,702,933 - 55,710,544 (7,612)
query : 1 - 7,612 (7,612/7,686)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 4, nucl 3, cyto 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224210)
HIX0224210
HIT000695583 (
ENST00000583705
)
(Conserved hypothetical protein.)
genome : 55,702,933 - 55,710,544 (7,612)
query : 1 - 7,612 (7,612/7,612)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 4, nucl 3, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224210)
HIX0224210
HIT000695699 (
ENST00000583821
)
(Conserved hypothetical protein.)
genome : 55,704,276 - 55,709,310 (5,035)
query : 1 - 548 (548/548)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 5, mito 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224210)
HIX0224210
HIT000048124
(
AK128251
)
(Conserved hypothetical protein.)
genome : 55,705,705 - 55,709,375 (3,671)
query : 1 - 3,671 (3,671/3,671)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 3, cyto 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224210)
HIX0027285
HIT000048913
(
AK129642
)
Representative transcript
(Hypothetical protein.)
genome : 55,731,047 - 55,732,651 (1,605)
query : 1 - 1,605 (1,605/1,618)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, cyto 11.5, extr 9, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027285)
HIX0224210
HIT000691394 (
ENST00000579466
)
(Non-protein coding transcript.)
genome : 55,748,835 - 55,752,417 (3,583)
query : 1 - 186 (186/186)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224210)
HIX0039589
HIT000115357 (
ENST00000299415
)
(Conserved hypothetical protein.)
genome : 55,821,842 - 55,822,673 (832)
query : 1 - 832 (832/832)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039589)
HIX0224465
HIT000692870 (
ENST00000580960
)
(Hypothetical short protein.)
genome : 55,849,307 - 55,912,110 (62,804)
query : 1 - 505 (505/505)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10.5, cyto_nucl 10.5, extr 10, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224465)
HIX0224465
HIT000693706 (
ENST00000581805
)
(Hypothetical short protein.)
genome : 55,849,307 - 55,911,970 (62,664)
query : 1 - 472 (472/472)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10.5, cyto_nucl 10.5, extr 10, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224465)
HIX0173956
HIT000508999 (
ENST00000411044
)
(Hypothetical protein.)
genome : 55,866,810 - 55,867,093 (284)
query : 1 - 284 (284/284)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 7, cyto_nucl 7, cyto 5.5, nucl 3.5,
E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173956)
HIX0195470
pHIT000029863 ( pHIT000029863 )
Representative transcript
(Hypothetical short protein.)
genome : 55,889,077 - 55,889,295 (219)
query : 1 - 219 (219/219)
1 exon
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195470)
CAGE tag :
H21BA95M0304
HIX0202474
HIT000205839 (
NM_016070
)
(Ribosomal protein S23/Rsm25, mitochondrial family protein.)
genome : 55,916,287 - 55,927,433 (11,147)
query : 1 - 1,492 (1,492/1,498)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 13, extr 2, nucl 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202474)
HIX0202474
HIT000071709
(
AF151896
)
(Conserved hypothetical protein.)
genome : 55,916,614 - 55,927,381 (10,768)
query : 1 - 1,112 (1,112/1,112)
5 exons
identity = 0.996
3'(0.997;0.992;1.000;1.000;0.963)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 9.5, cyto_nucl 7, nucl 3.5, extr 2,
golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202474)
HIX0202474
HIT000119817 (
ENST00000313608
)
(Ribosomal protein S23/Rsm25, mitochondrial family protein.)
genome : 55,916,842 - 55,927,417 (10,576)
query : 1 - 921 (921/921)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 13, extr 2, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202474)
HIX0202474
HIT000029452
(
BC000242
)
Representative transcript
(Ribosomal protein S23/Rsm25, mitochondrial family protein.)
genome : 55,916,913 - 55,927,399 (10,487)
query : 1 - 832 (832/849)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019520 : Ribosomal protein S23/Rsm25, mitochondrial
IPR023611 : Ribosomal protein S23/S25, mitochondrial
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 13, extr 2, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202474)
HIX0202474
HIT000072176
(
AF161447
)
(Conserved hypothetical protein.)
genome : 55,916,913 - 55,927,389 (10,477)
query : 2 - 811 (810/820)
5 exons
identity = 0.981
3'(0.964;0.992;1.000;1.000;0.984)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 9.5, cyto_nucl 7, nucl 3.5, extr 2,
golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202474)
HIX0202474
HIT000431595
(
AK312729
)
(Ribosomal protein S23/Rsm25, mitochondrial family protein.)
genome : 55,917,144 - 55,927,398 (10,255)
query : 1 - 600 (600/600)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019520 : Ribosomal protein S23/Rsm25, mitochondrial
IPR023611 : Ribosomal protein S23/S25, mitochondrial
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 13, extr 2, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202474)
HIX0202474
HIT000690387 (
ENST00000578444
)
(Ribosomal protein S23/Rsm25, mitochondrial family protein.)
genome : 55,918,161 - 55,927,405 (9,245)
query : 1 - 580 (580/580)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 14, cyto_mito 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202474)
HIX0202474
HIT000691309 (
ENST00000579380
)
(Conserved hypothetical protein.)
genome : 55,918,365 - 55,927,417 (9,053)
query : 1 - 516 (516/516)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 10.5, cyto_nucl 7.5, mito_pero 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202474)
HIX0202474
HIT000691692 (
ENST00000579768
)
(Ribosomal protein S23/S25, mitochondrial domain containing protein.)
genome : 55,926,097 - 55,927,358 (1,262)
query : 1 - 706 (706/706)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.1667, cyto_plas 10, mito 7,
nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202474)
HIX0014020
HIT000725107 (
NM_001271875
)
(CUE domain-containing protein 1.)
genome : 55,938,604 - 56,032,684 (94,081)
query : 1 - 3,621 (3,621/3,638)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014020)
HIX0014020
HIT000727627 (
NR_073495
)
(CUE domain-containing protein 1.)
genome : 55,938,604 - 55,980,750 (42,147)
query : 1 - 3,926 (3,926/3,943)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014020)
HIX0014020
HIT000689780 (
ENST00000577830
)
(CUE domain-containing protein 1.)
genome : 55,938,604 - 56,032,684 (94,081)
query : 1 - 3,621 (3,621/3,621)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014020)
HIX0014020
HIT000306234
(
CR627470
)
(CUE domain-containing protein 1.)
genome : 55,938,965 - 55,948,726 (9,762)
query : 1 - 2,871 (2,871/2,888)
5 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014020)
HIX0014020
HIT000696610 (
ENST00000584746
)
(CUE domain-containing protein 1.)
genome : 55,938,965 - 55,948,726 (9,762)
query : 1 - 2,870 (2,870/2,870)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014020)
HIX0014020
HIT000505873 (
ENST00000407144
)
(CUE domain-containing protein 1.)
genome : 55,940,057 - 55,970,049 (29,993)
query : 1 - 2,190 (2,190/2,190)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014020)
HIX0014020
HIT000693297 (
ENST00000581391
)
(CUE domain-containing protein 1.)
genome : 55,940,236 - 55,945,826 (5,591)
query : 1 - 857 (857/857)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014020)
HIX0014020
HIT000694835 (
ENST00000582951
)
(Conserved hypothetical protein.)
genome : 55,940,236 - 55,944,991 (4,756)
query : 1 - 756 (756/756)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 8, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014020)
HIX0014020
HIT000689376 (
ENST00000577422
)
(Hypothetical protein.)
genome : 55,940,236 - 55,944,666 (4,431)
query : 1 - 547 (547/547)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 8, extr 4, cyto_pero 4, cyto_plas 4,
cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014020)
HIX0014020
HIT000259607
(
BC056882
)
Representative transcript
(CUE domain-containing protein 1.)
genome : 55,940,336 - 56,032,684 (92,349)
query : 1 - 1,889 (1,889/1,903)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003892 : Ubiquitin system component Cue
IPR009060 : UBA-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014020)
Ortholog candidate ( ->
Evola
)
Takifugu
sp. (Fugu) : AF153879
Mus
sp. (Mouse) : BC029708
Rattus
sp. (Rat) : BC087087
Danio
sp. (Zebrafish) : BC133928
Bos
sp. (Cow) : BC142531
Danio
sp. (Zebrafish) : BC155215
Canis
sp. (Dog) : ENSCAFT00000027609
Equus
sp. (Horse) : ENSECAT00000013733
Gallus
sp. (Chicken) : ENSGALT00000008901
Macaca
sp. (Macaque) : ENSMMUT00000012900
Oryzias
sp. (Medaka) : ENSORLT00000018960
Pongo
sp. (Orangutan) : ENSPPYT00000009634
Pan
sp. (Chimpanzee) : ENSPTRT00000017318
Tetraodon
sp. (Tetraodon) : GSTENT00008766001
Monodelphis
sp. (Opossum) : XM_001367547
HIX0014020
HIT000693798 (
ENST00000581898
)
(CUE domain-containing protein 1.)
genome : 55,940,336 - 55,948,732 (8,397)
query : 7 - 474 (468/486)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.987
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 10, cyto_nucl 9.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014020)
HIX0014020
HIT000690301 (
ENST00000578357
)
(CUE domain-containing protein 1.)
genome : 55,940,336 - 55,947,299 (6,964)
query : 1 - 649 (649/661)
6 exons
identity = 0.992
3'(1.000;1.000;1.000;1.000;1.000;0.894)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 14, cyto 7.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014020)
HIX0014020
HIT000689450 (
ENST00000577497
)
(Hypothetical protein.)
genome : 55,940,336 - 55,944,218 (3,883)
query : 1 - 695 (695/707)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, mito 7, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014020)
HIX0014020
HIT000003221
(
AK000746
)
(CUE domain-containing protein 1.)
genome : 55,940,337 - 55,980,750 (40,414)
query : 1 - 2,193 (2,193/2,193)
11 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;0.995;
1.000;0.992;1.000;0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014020)
HIX0014020
HIT000313655 (
ENST00000360238
)
(CUE domain-containing protein 1.)
genome : 55,940,337 - 55,980,750 (40,414)
query : 1 - 2,193 (2,193/2,193)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014020)
HIX0014020
HIT000003451
(
AK000977
)
(CUE domain-containing protein 1.)
genome : 55,940,337 - 55,963,072 (22,736)
query : 7 - 1,543 (1,537/1,543)
10 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;0.991;
1.000;1.000;0.998)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014020)
HIX0014020
HIT000697152 (
ENST00000585294
)
(Conserved hypothetical protein.)
genome : 55,940,337 - 55,944,776 (4,440)
query : 1 - 512 (512/512)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 10, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014020)
HIX0014020
HIT000689790 (
ENST00000577840
)
(CUE domain-containing protein 1.)
genome : 55,943,835 - 56,032,618 (88,784)
query : 1 - 861 (861/875)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.984
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 15, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014020)
HIX0014020
HIT000689539 (
ENST00000577589
)
(CUE domain-containing protein 1.)
genome : 55,950,172 - 55,963,198 (13,027)
query : 1 - 705 (705/705)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 14, cyto 12, cyto_nucl 10.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014020)
HIX0224438
HIT000691214 (
ENST00000579285
)
(Hypothetical short protein.)
genome : 55,989,694 - 55,999,942 (10,249)
query : 1 - 335 (335/335)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224438)
HIX0224438
HIT000692104 (
ENST00000580184
)
(Hypothetical short protein.)
genome : 55,989,725 - 55,992,500 (2,776)
query : 1 - 242 (242/242)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224438)
HIX0202446
HIT000203663 (
NM_007146
)
(Vascular endothelial zinc finger 1; Putative transcription factor DB1; Zinc finger protein 161;)
genome : 56,048,910 - 56,065,615 (16,706)
query : 1 - 4,633 (4,633/4,652)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202446)
HIX0202446
HIT000057509
(
BX648862
)
(Vascular endothelial zinc finger 1.)
genome : 56,048,910 - 56,060,225 (11,316)
query : 5 - 3,926 (3,922/3,945)
5 exons
identity = 0.996
3'(1.000;0.887;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202446)
HIX0202446
HIT000107405 (
ENST00000258963
)
(Vascular endothelial zinc finger 1.)
genome : 56,048,910 - 56,060,225 (11,316)
query : 1 - 3,946 (3,946/3,946)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202446)
HIX0202446
HIT000014630
(
AK058024
)
(Hypothetical short protein.)
genome : 56,048,916 - 56,049,872 (957)
query : 1 - 956 (956/956)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202446)
HIX0202446
HIT000101167
(
D28118
)
Representative transcript
(Vascular endothelial zinc finger 1; Putative transcription factor DB1; Zinc finger protein 161;)
genome : 56,051,120 - 56,065,513 (14,394)
query : 1 - 2,306 (2,306/2,306)
6 exons
identity = 0.993
3'(0.999;0.901;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202446)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF104410
Gallus
sp. (Chicken) : AY775302
Danio
sp. (Zebrafish) : BC122297
Bos
sp. (Cow) : BC149697
Equus
sp. (Horse) : ENSECAT00000016923
Monodelphis
sp. (Opossum) : ENSMODT00000035914
Oryzias
sp. (Medaka) : ENSORLT00000012163
Rattus
sp. (Rat) : ENSRNOT00000013387
Tetraodon
sp. (Tetraodon) : GSTENT00022260001
Takifugu
sp. (Fugu) : SINFRUT00000151096
Macaca
sp. (Macaque) : XM_001103313
Pan
sp. (Chimpanzee) : XM_523805
Canis
sp. (Dog) : XM_548226
HIX0202446
HIT000693115_02 (
ENST00000581208
)
(Vascular endothelial zinc finger 1; Putative transcription factor DB1; Zinc finger protein 161;)
genome : 56,051,120 - 56,065,513 (14,394)
query : 1 - 2,321 (2,321/2,321)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202446)
HIX0202446
HIT000696266_02 (
ENST00000584396
)
(Vascular endothelial zinc finger 1.)
genome : 56,051,120 - 56,062,709 (11,590)
query : 1 - 2,342 (2,342/2,342)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202446)
HIX0202446
HIT000695809 (
ENST00000583932
)
(Vascular endothelial zinc finger 1.)
genome : 56,060,271 - 56,065,620 (5,350)
query : 1 - 825 (825/825)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202446)
HIX0212450
HIT000563984
(
AB593183
)
Representative transcript
(Hypothetical protein.)
genome : 56,065,541 - 56,066,121 (581)
query : 1 - 581 (581/581)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 7, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212450)
HIX0202432
HIT000011224
(
AK054610
)
(Conserved hypothetical protein.)
genome : 56,066,400 - 56,068,882 (2,483)
query : 1 - 2,483 (2,483/2,483)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, cyto 9, mito 7.5, cyto_nucl 7.5, cyto_pero 7,
E.R._mito 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202432)
HIX0202432
HIT000693994 (
ENST00000582096
)
(Conserved hypothetical protein.)
genome : 56,066,400 - 56,068,882 (2,483)
query : 1 - 2,483 (2,483/2,483)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, cyto 9, mito 7.5, cyto_nucl 7.5, cyto_pero 7,
E.R._mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202432)
HIX0202432
HIT000019967
(
AK095112
)
(Conserved hypothetical protein.)
genome : 56,066,403 - 56,070,840 (4,438)
query : 1 - 4,055 (4,055/4,055)
2 exons
identity = 0.999
3'(1.000;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 10.5, cyto_nucl 10, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202432)
HIX0202432
HIT000689222 (
ENST00000577267
)
(Conserved hypothetical protein.)
genome : 56,066,403 - 56,070,840 (4,438)
query : 1 - 4,056 (4,056/4,056)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 10.5, cyto_nucl 10, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202432)
HIX0202432
HIT000046191
(
AK126318
)
Representative transcript
(Conserved hypothetical protein.)
genome : 56,066,405 - 56,072,211 (5,807)
query : 1 - 4,720 (4,720/4,720)
2 exons
identity = 0.999
3'(1.000;0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, cyto 9, mito 7.5, cyto_nucl 7.5, cyto_pero 7,
E.R._mito 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202432)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000009633
HIX0202432
HIT000696924 (
ENST00000585065
)
(Conserved hypothetical protein.)
genome : 56,066,405 - 56,072,211 (5,807)
query : 1 - 4,722 (4,722/4,722)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, cyto 9, mito 7.5, cyto_nucl 7.5, cyto_pero 7,
E.R._mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202432)
HIX0224890
HIT000693400 (
ENST00000581497
)
(Hypothetical short protein.)
genome : 56,080,854 - 56,082,495 (1,642)
query : 1 - 438 (438/438)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.6667, cyto 14.5, cyto_plas 9.5, extr 7,
nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224890)
HIX0173551
HIT000431647
(
AK312781
)
Representative transcript
(Serine/arginine-rich splicing factor 1; Alternative-splicing factor 1; ASF-1; Splicing factor, arginine/serine-rich 1; pre-mRNA-splicing factor SF2, P33 subunit;)
genome : 56,082,767 - 56,084,604 (1,838)
query : 1 - 853 (853/853)
4 exons
identity = 0.999
3'(1.000;1.000;0.995;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 18, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173551)
HIX0173551
HIT000690373 (
ENST00000578430
)
(Serine/arginine-rich splicing factor 1; Alternative-splicing factor 1; ASF-1; Splicing factor, arginine/serine-rich 1; pre-mRNA-splicing factor SF2, P33 subunit;)
genome : 56,083,603 - 56,084,707 (1,105)
query : 1 - 689 (689/689)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 6, nucl 3, cyto_pero 3, cyto_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173551)
HIX0173551
HIT000426226
(
AK307360
)
(Serine/arginine-rich splicing factor 1; Alternative-splicing factor 1; ASF-1; Splicing factor, arginine/serine-rich 1; pre-mRNA-splicing factor SF2, P33 subunit;)
genome : 56,084,035 - 56,085,548 (1,514)
query : 1 - 1,514 (1,514/1,514)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12, extr 8, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173551)
HIX0039578
HIT000306885
(
CR936603
)
Representative transcript
(Conserved hypothetical protein.)
genome : 56,154,252 - 56,160,565 (6,314)
query : 2 - 6,111 (6,110/6,131)
3 exons
identity = 0.998
3'(0.996;0.998;0.998)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, extr 10, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039578)
HIX0039578
HIT000696669 (
ENST00000584805
)
(Conserved hypothetical protein.)
genome : 56,154,252 - 56,160,565 (6,314)
query : 1 - 6,113 (6,113/6,113)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, cyto_nucl 8.16667, cyto 7.5, extr_plas 7.5,
nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039578)
HIX0202485
HIT000105046 (
ENST00000240343
)
(Dynein light chain 2, cytoplasmic; 8 kDa dynein light chain b; DLC8b; Dynein light chain LC8-type 2;)
genome : 56,160,776 - 56,168,592 (7,817)
query : 1 - 2,500 (2,500/2,500)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15.1667, cyto_plas 12, extr 5,
nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202485)
HIX0202485
HIT000211875 (
NM_080677
)
(Dynein light chain 2, cytoplasmic; 8 kDa dynein light chain b; DLC8b; Dynein light chain LC8-type 2;)
genome : 56,160,780 - 56,167,618 (6,839)
query : 1 - 1,522 (1,522/1,522)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15.1667, cyto_plas 12, extr 5,
nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202485)
HIX0202485
HIT000035065
(
BC010744
)
Representative transcript
(Dynein light chain 2, cytoplasmic; 8 kDa dynein light chain b; DLC8b; Dynein light chain LC8-type 2;)
genome : 56,160,799 - 56,166,811 (6,013)
query : 1 - 704 (704/735)
3 exons
identity = 0.987
5'(0.965;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001372 : Dynein light chain, type 1/2
IPR019763 : Dynein light chain, type 1/2, conserved site
GO :
0005875 : Cellular Component : microtubule associated complex
0007017 : Biological Process : microtubule-based process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15.1667, cyto_plas 12, extr 5,
nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202485)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK006876
Rattus
sp. (Rat) : BC061874
Danio
sp. (Zebrafish) : BC090543
Bos
sp. (Cow) : BC105140
Gallus
sp. (Chicken) : CR391680
Tetraodon
sp. (Tetraodon) : CR681429
Equus
sp. (Horse) : ENSECAT00000016481
Macaca
sp. (Macaque) : ENSMMUT00000031626
Monodelphis
sp. (Opossum) : ENSMODT00000018811
Oryzias
sp. (Medaka) : ENSORLT00000005747
Pongo
sp. (Orangutan) : ENSPPYT00000009631
Takifugu
sp. (Fugu) : SINFRUT00000183595
Pan
sp. (Chimpanzee) : XM_001172477
Canis
sp. (Dog) : XM_861772
HIX0202485
HIT000242696
(
AF112997
)
(Dynein light chain 2, cytoplasmic; 8 kDa dynein light chain b; DLC8b; Dynein light chain LC8-type 2;)
genome : 56,164,196 - 56,166,811 (2,616)
query : 1 - 695 (695/700)
2 exons
identity = 0.963
5'(0.933;1.000)3'
coverage = 0.993
InterPro :
IPR001372 : Dynein light chain, type 1/2
IPR019763 : Dynein light chain, type 1/2, conserved site
GO :
0005875 : Cellular Component : microtubule associated complex
0007017 : Biological Process : microtubule-based process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 5.5, cyto 5, mito_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202485)
HIX0202485
HIT000430991
(
AK312125
)
(Dynein light chain 2, cytoplasmic; 8 kDa dynein light chain b; DLC8b; Dynein light chain LC8-type 2;)
genome : 56,164,433 - 56,166,640 (2,208)
query : 24 - 313 (290/313)
2 exons
identity = 0.990
5'(0.980;1.000)3'
coverage = 0.927
InterPro :
IPR001372 : Dynein light chain, type 1/2
IPR019763 : Dynein light chain, type 1/2, conserved site
GO :
0005875 : Cellular Component : microtubule associated complex
0007017 : Biological Process : microtubule-based process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15.1667, cyto_plas 12, extr 5,
nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202485)
HIX0202485
HIT000067183
(
AF086304
)
(Dynein light chain 2, cytoplasmic.)
genome : 56,164,470 - 56,166,811 (2,342)
query : 1 - 423 (423/433)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.998
InterPro :
IPR001372 : Dynein light chain, type 1/2
IPR019763 : Dynein light chain, type 1/2, conserved site
GO :
0005875 : Cellular Component : microtubule associated complex
0007017 : Biological Process : microtubule-based process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 4, nucl 3, mito 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202485)
HIX0224846
HIT000691911 (
ENST00000579991
)
(Hypothetical protein.)
genome : 56,168,909 - 56,172,897 (3,989)
query : 1 - 3,989 (3,989/3,989)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 5, nucl 4, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224846)
HIX0202502
HIT000043286
(
AK123413
)
Representative transcript
(Conserved hypothetical protein.)
genome : 56,173,033 - 56,176,446 (3,414)
query : 1 - 3,414 (3,414/3,414)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 7, cyto_nucl 3.66667, nucl 3.5,
extr_plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202502)
HIX0202502
HIT000046324
(
AK126451
)
(Hypothetical short protein.)
genome : 56,173,779 - 56,176,460 (2,682)
query : 1 - 2,682 (2,682/2,682)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, extr 13, cyto_nucl 9.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202502)
HIX0079883
HIT000044407
(
AK124534
)
Representative transcript
(Conserved hypothetical protein.)
genome : 56,174,501 - 56,178,840 (4,340)
query : 1 - 4,340 (4,340/4,342)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 7, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079883)
HIX0079883
HIT000021030
(
AK096175
)
(Conserved hypothetical protein.)
genome : 56,176,112 - 56,178,844 (2,733)
query : 1 - 2,731 (2,731/2,731)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 7, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079883)
HIX0202610
HIT000447238_06
(
DQ580707
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,222,003 - 56,222,032 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202610)
HIX0202548
HIT000383189
(
AB065489
)
(Olfactory receptor 4D1; Olfactory receptor 4D3; Olfactory receptor TPCR16;)
genome : 56,232,488 - 56,233,647 (1,160)
query : 1 - 1,162 (1,162/1,172)
1 exon
identity = 0.967
5'(0.967)3'
coverage = 0.991
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202548)
HIX0202548
HIT000110360 (
ENST00000268912
)
(Olfactory receptor 4D1; Olfactory receptor 4D3; Olfactory receptor TPCR16;)
genome : 56,232,494 - 56,233,517 (1,024)
query : 1 - 1,024 (1,024/1,024)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202548)
HIX0202548
HIT000500601
(
BC136589
)
Representative transcript
(Olfactory receptor 4D1; Olfactory receptor 4D3; Olfactory receptor TPCR16;)
genome : 56,232,494 - 56,233,517 (1,024)
query : 1 - 1,024 (1,024/1,024)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202548)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC120701
Canis
sp. (Dog) : ENSCAFT00000035722
Pongo
sp. (Orangutan) : ENSPPYT00000009630
Macaca
sp. (Macaque) : XM_001106115
Monodelphis
sp. (Opossum) : XM_001366893
Equus
sp. (Horse) : XM_001503473
Pan
sp. (Chimpanzee) : XM_523807
HIX0202548
HIT000500606
(
BC136595
)
(Olfactory receptor 4D1; Olfactory receptor 4D3; Olfactory receptor TPCR16;)
genome : 56,232,494 - 56,233,517 (1,024)
query : 1 - 1,024 (1,024/1,024)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202548)
HIX0202548
HIT000317103 (
NM_012374
)
(Olfactory receptor 4D1; Olfactory receptor 4D3; Olfactory receptor TPCR16;)
genome : 56,232,515 - 56,233,447 (933)
query : 1 - 933 (933/933)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202548)
HIX0202548
HIT000324369
(
X89670
)
(Olfactory receptor 4D1; Olfactory receptor 4D3; Olfactory receptor TPCR16;)
genome : 56,232,889 - 56,233,351 (463)
query : 1 - 463 (463/463)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202548)
HIX0202560
HIT000366976 (
NR_002307
)
(Homeobox protein MSX-2; Homeobox protein Hox-8-1; Fragment;)
genome : 56,234,320 - 56,236,481 (2,162)
query : 1 - 2,162 (2,162/2,162)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202560)
HIX0202560
HIT000695975 (
ENST00000584100
)
(Homeobox protein MSX-2; Homeobox protein Hox-8-1; Fragment;)
genome : 56,234,389 - 56,235,161 (773)
query : 1 - 773 (773/773)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202560)
HIX0202560
HIT000530830 (
ENST00000432896
)
(Non-protein coding transcript.)
genome : 56,234,809 - 56,234,926 (118)
query : 1 - 114 (114/114)
1 exon
identity = 0.966
5'(0.966)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202560)
HIX0202560
HIT000323496
(
X74862
)
Representative transcript
(Homeobox protein MSX-2; Homeobox protein Hox-8-1; Fragment;)
genome : 56,234,809 - 56,234,925 (117)
query : 1 - 116 (116/116)
1 exon
identity = 0.991
5'(0.991)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 11, cyto_nucl 11, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202560)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : XR_012931
Pan
sp. (Chimpanzee) : XR_021852
HIX0202549
HIT000383509
(
AB065912
)
Representative transcript
(Olfactory receptor 4D2; B-lymphocyte membrane protein BC2009; Olfactory receptor OR17-24;)
genome : 56,246,817 - 56,248,140 (1,324)
query : 1 - 1,324 (1,324/1,324)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202549)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC108939
Pan
sp. (Chimpanzee) : ENSPTRT00000017322
Rattus
sp. (Rat) : NM_001000039
Macaca
sp. (Macaque) : XM_001106186
Bos
sp. (Cow) : XM_001255668
Equus
sp. (Horse) : XM_001500567
Canis
sp. (Dog) : XM_548227
HIX0202549
HIT000315968 (
NM_001004707
)
(Olfactory receptor 4D2; B-lymphocyte membrane protein BC2009; Olfactory receptor OR17-24;)
genome : 56,247,017 - 56,247,940 (924)
query : 1 - 924 (924/924)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202549)
HIX0202549
HIT000644266 (
ENST00000545221
)
(Olfactory receptor 4D2; B-lymphocyte membrane protein BC2009; Olfactory receptor OR17-24;)
genome : 56,247,017 - 56,247,940 (924)
query : 1 - 924 (924/924)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202549)
HIX0202549
HIT000383982
(
AF399568
)
(Olfactory receptor 4D2; B-lymphocyte membrane protein BC2009; Olfactory receptor OR17-24;)
genome : 56,247,218 - 56,247,858 (641)
query : 1 - 641 (641/641)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202549)
HIX0202542
HIT000197537 (
NM_000502
)
(Eosinophil peroxidase; EPO; EC=1.11.1.7; Contains: Eosinophil peroxidase light chain; Contains: Eosinophil peroxidase heavy chain; Precursor;)
genome : 56,270,089 - 56,282,535 (12,447)
query : 1 - 2,717 (2,717/2,731)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, E.R. 13, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202542)
HIX0202542
HIT000103882 (
ENST00000225371
)
(Eosinophil peroxidase; EPO; EC=1.11.1.7; Contains: Eosinophil peroxidase light chain; Contains: Eosinophil peroxidase heavy chain; Precursor;)
genome : 56,270,098 - 56,282,535 (12,438)
query : 1 - 2,708 (2,708/2,708)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, E.R. 13, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202542)
HIX0202542
HIT000321420
(
X14346
)
Representative transcript
(Eosinophil peroxidase; EPO; EC=1.11.1.7; Contains: Eosinophil peroxidase light chain; Contains: Eosinophil peroxidase heavy chain; Precursor;)
genome : 56,270,396 - 56,282,527 (12,132)
query : 38 - 2,550 (2,513/2,558)
12 exons
identity = 0.997
5'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.996;0.991;0.993)3'
coverage = 0.982
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR010255 : Haem peroxidase
IPR019791 : Haem peroxidase, animal
GO :
0004601 : Molecular Function : peroxidase activity
0006979 : Biological Process : response to oxidative stress
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 16, cyto 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202542)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC068379
Mus
sp. (Mouse) : D78353
Bos
sp. (Cow) : ENSBTAT00000047902
Canis
sp. (Dog) : ENSCAFT00000027659
Macaca
sp. (Macaque) : ENSMMUT00000016771
Oryzias
sp. (Medaka) : ENSORLT00000011723
Pongo
sp. (Orangutan) : ENSPPYT00000009629
Rattus
sp. (Rat) : ENSRNOT00000011735
Tetraodon
sp. (Tetraodon) : GSTENT00012455001
Takifugu
sp. (Fugu) : SINFRUT00000159815
Monodelphis
sp. (Opossum) : XM_001366738
Equus
sp. (Horse) : XM_001500582
Gallus
sp. (Chicken) : XM_415715
Pan
sp. (Chimpanzee) : XM_523809
HIX0224286
HIT000695458 (
ENST00000583577
)
(Conserved hypothetical protein.)
genome : 56,283,249 - 56,284,141 (893)
query : 1 - 697 (697/697)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, extr 12, cyto_nucl 10.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224286)
HIX0224286
HIT000268079
(
CR457229
)
Representative transcript
(B9 domain family protein.)
genome : 56,283,441 - 56,292,187 (8,747)
query : 1 - 1,250 (1,250/1,251)
14 exons
identity = 0.999
3'(0.989;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR010796 : B9 domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 15.5, cyto 7, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224286)
HIX0224286
HIT000689269 (
ENST00000577315
)
(B9 domain family protein.)
genome : 56,284,922 - 56,288,089 (3,168)
query : 8 - 495 (488/495)
5 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.986)5'
coverage = 0.986
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 8.5, cyto_nucl 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224286)
HIX0224286
HIT000689774 (
ENST00000577824
)
(B9 domain family protein.)
genome : 56,284,923 - 56,291,740 (6,818)
query : 1 - 1,158 (1,158/1,158)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 16.5, nucl 7, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224286)
HIX0224286
HIT000696992 (
ENST00000585134
)
(B9 domain family protein.)
genome : 56,284,927 - 56,290,423 (5,497)
query : 1 - 824 (824/824)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15.5, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224286)
HIX0224286
HIT000691287 (
ENST00000579358
)
(B9 domain family protein.)
genome : 56,285,502 - 56,288,481 (2,980)
query : 1 - 567 (567/567)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 10, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224286)
HIX0224882
HIT000693087 (
ENST00000581180
)
(Conserved hypothetical protein.)
genome : 56,292,967 - 56,296,591 (3,625)
query : 1 - 899 (899/899)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.5, cyto 16, nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224882)
HIX0027118
HIT000694222 (
ENST00000582328
)
(Lactoperoxidase isoform 3 preproprotein.)
genome : 56,295,909 - 56,345,587 (49,679)
query : 1 - 2,680 (2,680/2,680)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 6, pero 5, lyso 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0027118
HIT000317037 (
NM_006151
)
(Lactoperoxidase; LPO; EC=1.11.1.7; Salivary peroxidase; SPO; Precursor;)
genome : 56,315,787 - 56,345,879 (30,093)
query : 1 - 2,979 (2,979/2,993)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, E.R. 8.5, E.R._golg 6.5, pero 4, lyso 4,
golg 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0027118
HIT000561840 (
NM_001160102
)
(Lactoperoxidase isoform 3 preproprotein.)
genome : 56,315,787 - 56,345,879 (30,093)
query : 1 - 2,730 (2,730/2,744)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 6, pero 5, lyso 3, mito_pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0027118
HIT000563564 (
NR_027647
)
(Lactoperoxidase isoform 3 preproprotein.)
genome : 56,315,787 - 56,345,879 (30,093)
query : 1 - 2,891 (2,891/2,905)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16, cyto 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0027118
HIT000108338 (
ENST00000262290
)
(Lactoperoxidase; LPO; EC=1.11.1.7; Salivary peroxidase; SPO; Precursor;)
genome : 56,315,787 - 56,345,879 (30,093)
query : 1 - 2,979 (2,979/2,979)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, E.R. 8.5, E.R._golg 6.5, pero 4, lyso 4,
golg 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0027118
HIT000519612 (
ENST00000421678
)
(Lactoperoxidase isoform 3 preproprotein.)
genome : 56,315,787 - 56,345,878 (30,092)
query : 1 - 2,729 (2,729/2,729)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 6, pero 5, lyso 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0027118
HIT000338730
(
BC107166
)
(Lactoperoxidase; LPO; EC=1.11.1.7; Salivary peroxidase; SPO; Precursor;)
genome : 56,315,916 - 56,345,461 (29,546)
query : 1 - 2,432 (2,432/2,432)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR010255 : Haem peroxidase
IPR019791 : Haem peroxidase, animal
GO :
0004601 : Molecular Function : peroxidase activity
0006979 : Biological Process : response to oxidative stress
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, E.R. 8.5, E.R._golg 6.5, pero 4, lyso 4,
golg 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0027118
HIT000338731
(
BC107167
)
(Lactoperoxidase; LPO; EC=1.11.1.7; Salivary peroxidase; SPO; Precursor;)
genome : 56,315,916 - 56,345,461 (29,546)
query : 1 - 2,432 (2,432/2,432)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR010255 : Haem peroxidase
IPR019791 : Haem peroxidase, animal
GO :
0004601 : Molecular Function : peroxidase activity
0006979 : Biological Process : response to oxidative stress
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, E.R. 8.5, E.R._golg 6.5, pero 4, lyso 4,
golg 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0027118
HIT000056956
(
BX648309
)
(Lactoperoxidase; LPO; EC=1.11.1.7; Salivary peroxidase; SPO; Precursor;)
genome : 56,315,950 - 56,345,797 (29,848)
query : 2 - 2,735 (2,734/2,757)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;1.000;0.996;0.997)3'
coverage = 1.000
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR010255 : Haem peroxidase
IPR019791 : Haem peroxidase, animal
GO :
0004601 : Molecular Function : peroxidase activity
0006979 : Biological Process : response to oxidative stress
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 10.5, E.R._golg 8, extr 7, golg 4.5, pero 4,
lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0027118
HIT000498527
(
AK303903
)
(Lactoperoxidase isoform 3 preproprotein.)
genome : 56,315,952 - 56,345,503 (29,552)
query : 1 - 2,350 (2,350/2,350)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.997;
1.000;1.000;1.000;0.996;1.000)3'
coverage = 1.000
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR010255 : Haem peroxidase
IPR019791 : Haem peroxidase, animal
GO :
0004601 : Molecular Function : peroxidase activity
0006979 : Biological Process : response to oxidative stress
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0027118
HIT000642589 (
ENST00000543544
)
(Lactoperoxidase isoform 3 preproprotein.)
genome : 56,315,952 - 56,345,503 (29,552)
query : 1 - 2,350 (2,350/2,350)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0027118
HIT000219690
(
U39573
)
Representative transcript
(Lactoperoxidase; LPO; EC=1.11.1.7; Salivary peroxidase; SPO; Precursor;)
genome : 56,316,022 - 56,345,879 (29,858)
query : 1 - 2,744 (2,744/2,768)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 0.991
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR010255 : Haem peroxidase
IPR019791 : Haem peroxidase, animal
GO :
0004601 : Molecular Function : peroxidase activity
0006979 : Biological Process : response to oxidative stress
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, E.R. 8.5, E.R._golg 6.5, pero 4, lyso 4,
golg 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC016212
Canis
sp. (Dog) : ENSCAFT00000027673
Monodelphis
sp. (Opossum) : ENSMODT00000018764
Oryzias
sp. (Medaka) : ENSORLT00000011664
Pongo
sp. (Orangutan) : ENSPPYT00000009628
Tetraodon
sp. (Tetraodon) : GSTENT00029459001
Bos
sp. (Cow) : M58150
Takifugu
sp. (Fugu) : SINFRUT00000150754
Rattus
sp. (Rat) : XM_001081174
Macaca
sp. (Macaque) : XM_001106438
Equus
sp. (Horse) : XM_001503685
Danio
sp. (Zebrafish) : XM_001919827
Gallus
sp. (Chicken) : XM_415716
Pan
sp. (Chimpanzee) : XR_024789
HIX0027118
HIT000429831
(
AK310965
)
(Lactoperoxidase; LPO; EC=1.11.1.7; Salivary peroxidase; SPO; Precursor;)
genome : 56,316,033 - 56,328,614 (12,582)
query : 2 - 1,483 (1,482/1,483)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.999
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR010255 : Haem peroxidase
IPR019791 : Haem peroxidase, animal
GO :
0004601 : Molecular Function : peroxidase activity
0006979 : Biological Process : response to oxidative stress
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0027118
HIT000690346 (
ENST00000578403
)
(Lactoperoxidase; LPO; EC=1.11.1.7; Salivary peroxidase; SPO; Precursor;)
genome : 56,316,032 - 56,328,614 (12,583)
query : 1 - 1,483 (1,483/1,483)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0027118
HIT000427244
(
AK308378
)
(Lactoperoxidase; LPO; EC=1.11.1.7; Salivary peroxidase; SPO; Precursor;)
genome : 56,316,062 - 56,329,711 (13,650)
query : 1 - 990 (990/990)
8 exons
identity = 0.997
5'(1.000;1.000;0.989;0.994;1.000;1.000;1.000;
0.994)3'
coverage = 1.000
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR010255 : Haem peroxidase
IPR019791 : Haem peroxidase, animal
GO :
0004601 : Molecular Function : peroxidase activity
0006979 : Biological Process : response to oxidative stress
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0027118
HIT000249784
(
AK131496
)
(Lactoperoxidase; LPO; EC=1.11.1.7; Salivary peroxidase; SPO; Precursor;)
genome : 56,316,063 - 56,329,206 (13,144)
query : 2 - 3,371 (3,370/3,371)
5 exons
identity = 0.998
5'(1.000;0.999;1.000;1.000;0.996)3'
coverage = 1.000
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR010255 : Haem peroxidase
IPR019791 : Haem peroxidase, animal
GO :
0004601 : Molecular Function : peroxidase activity
0006979 : Biological Process : response to oxidative stress
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 14, cyto 10.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0027118
HIT000690582 (
ENST00000578643
)
(Lactoperoxidase; LPO; EC=1.11.1.7; Precursor;)
genome : 56,316,062 - 56,329,206 (13,145)
query : 1 - 3,371 (3,371/3,371)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 7, cyto 7, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0027118
HIT000495277
(
AK300653
)
(Lactoperoxidase isoform 3 preproprotein.)
genome : 56,316,062 - 56,328,653 (12,592)
query : 1 - 1,244 (1,244/1,244)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR010255 : Haem peroxidase
IPR019791 : Haem peroxidase, animal
GO :
0004601 : Molecular Function : peroxidase activity
0006979 : Biological Process : response to oxidative stress
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0027118
HIT000692262 (
ENST00000580346
)
(Lactoperoxidase isoform 3 preproprotein.)
genome : 56,316,062 - 56,328,653 (12,592)
query : 1 - 1,243 (1,243/1,243)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0027118
HIT000694574 (
ENST00000582684
)
(Lactoperoxidase; LPO; EC=1.11.1.7; Salivary peroxidase; SPO; Precursor;)
genome : 56,316,062 - 56,321,819 (5,758)
query : 1 - 582 (582/582)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0027118
HIT000469152
(
EF579964
)
(Lactoperoxidase isoform 3 preproprotein.)
genome : 56,316,065 - 56,345,587 (29,523)
query : 1 - 2,160 (2,160/2,160)
11 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.995;1.000;0.994;
1.000;0.994;1.000;0.998)3'
coverage = 1.000
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR010255 : Haem peroxidase
IPR019791 : Haem peroxidase, animal
GO :
0004601 : Molecular Function : peroxidase activity
0006979 : Biological Process : response to oxidative stress
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, E.R. 6, lyso 5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0027118
HIT000692918 (
ENST00000581008
)
(Lactoperoxidase isoform 3 preproprotein.)
genome : 56,316,076 - 56,327,029 (10,954)
query : 1 - 585 (585/585)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, extr 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0027118
HIT000055126
(
BX538344
)
(Lactoperoxidase; LPO; EC=1.11.1.7; Salivary peroxidase; SPO; Precursor;)
genome : 56,326,459 - 56,345,795 (19,337)
query : 1 - 1,966 (1,966/1,986)
9 exons
identity = 0.998
5'(1.000;0.992;1.000;1.000;1.000;1.000;1.000;
0.996;0.998)3'
coverage = 0.999
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR010255 : Haem peroxidase
IPR019791 : Haem peroxidase, animal
GO :
0004601 : Molecular Function : peroxidase activity
0006979 : Biological Process : response to oxidative stress
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0027118
HIT000692800 (
ENST00000580890
)
(Lactoperoxidase; LPO; EC=1.11.1.7; Salivary peroxidase; SPO; Precursor;)
genome : 56,326,459 - 56,345,799 (19,341)
query : 1 - 1,970 (1,970/1,970)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0027118
HIT000396484 (
ENST00000389576
)
(Lactoperoxidase; LPO; EC=1.11.1.7; Salivary peroxidase; SPO; Precursor;)
genome : 56,329,543 - 56,345,879 (16,337)
query : 1 - 1,942 (1,942/1,942)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 12.5, pero 3, extr 2, nucl 2,
mito 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0027118
HIT000195861
(
M58151
)
(Lactoperoxidase; LPO; EC=1.11.1.7; Salivary peroxidase; SPO; Precursor;)
genome : 56,332,231 - 56,345,778 (13,548)
query : 2 - 1,399 (1,398/1,399)
5 exons
identity = 0.999
5'(0.990;1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR010255 : Haem peroxidase
IPR019791 : Haem peroxidase, animal
GO :
0004601 : Molecular Function : peroxidase activity
0006979 : Biological Process : response to oxidative stress
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 15, nucl 3.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0027118
HIT000062898
(
AF027971
)
(Lactoperoxidase; LPO; EC=1.11.1.7; Salivary peroxidase; SPO; Precursor;)
genome : 56,342,073 - 56,344,853 (2,781)
query : 1 - 581 (581/581)
3 exons
identity = 0.990
5'(0.985;1.000;0.986)3'
coverage = 1.000
EC number :
EC 1.11.1.7
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR010255 : Haem peroxidase
GO :
0004601 : Molecular Function : peroxidase activity
0006979 : Biological Process : response to oxidative stress
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 11.5, mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027118)
HIX0039242
HIT000321072
(
X04876
)
(Myeloperoxidase; MPO; EC=1.11.2.2; Contains: Myeloperoxidase; Contains: 89 kDa myeloperoxidase; Contains: 84 kDa myeloperoxidase; Contains: Myeloperoxidase light chain; Contains: Myeloperoxidase heavy chain; Precursor;)
genome : 56,347,202 - 56,358,282 (11,081)
query : 1 - 3,213 (3,213/3,213)
12 exons
identity = 0.998
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994)5'
coverage = 1.000
EC number :
EC 1.11.2.2
InterPro :
IPR010255 : Haem peroxidase
IPR019791 : Haem peroxidase, animal
GO :
0004601 : Molecular Function : peroxidase activity
0006979 : Biological Process : response to oxidative stress
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, plas 7, E.R. 3.5, E.R._mito 3.5,
cysk_plas 3.5, cyto_plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039242)
HIX0039242
HIT000103872 (
ENST00000225275
)
(Myeloperoxidase; MPO; EC=1.11.2.2; Contains: Myeloperoxidase; Contains: 89 kDa myeloperoxidase; Contains: 84 kDa myeloperoxidase; Contains: Myeloperoxidase light chain; Contains: Myeloperoxidase heavy chain; Precursor;)
genome : 56,347,217 - 56,358,296 (11,080)
query : 1 - 3,215 (3,215/3,215)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.11.2.2
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, plas 7, E.R. 3.5, E.R._mito 3.5,
cysk_plas 3.5, cyto_plas 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039242)
HIX0039242
HIT000133112 (
ENST00000340482
)
(Myeloperoxidase; MPO; EC=1.11.2.2; Contains: Myeloperoxidase; Contains: 89 kDa myeloperoxidase; Contains: 84 kDa myeloperoxidase; Contains: Myeloperoxidase light chain; Contains: Myeloperoxidase heavy chain; Precursor;)
genome : 56,347,217 - 56,358,296 (11,080)
query : 1 - 3,311 (3,311/3,311)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.11.2.2
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, plas 6, E.R. 3, cysk_plas 3, cyto_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039242)
HIX0039242
HIT000194690
(
M19507
)
Representative transcript
(Myeloperoxidase; MPO; EC=1.11.2.2; Contains: Myeloperoxidase; Contains: 89 kDa myeloperoxidase; Contains: 84 kDa myeloperoxidase; Contains: Myeloperoxidase light chain; Contains: Myeloperoxidase heavy chain; Precursor;)
genome : 56,347,217 - 56,358,296 (11,080)
query : 1 - 3,215 (3,215/3,215)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.11.1.7
,
EC 1.11.2.2
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR010255 : Haem peroxidase
IPR019791 : Haem peroxidase, animal
GO :
0004601 : Molecular Function : peroxidase activity
0006979 : Biological Process : response to oxidative stress
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, plas 7, E.R. 3.5, E.R._mito 3.5,
cysk_plas 3.5, cyto_plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039242)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC068379
Bos
sp. (Cow) : BC149472
Tetraodon
sp. (Tetraodon) : CR721797
Oryzias
sp. (Medaka) : ENSORLT00000007692
Oryzias
sp. (Medaka) : ENSORLT00000007992
Pongo
sp. (Orangutan) : ENSPPYT00000009627
Rattus
sp. (Rat) : ENSRNOT00000011108
Takifugu
sp. (Fugu) : SINFRUT00000141686
Mus
sp. (Mouse) : X15313
Macaca
sp. (Macaque) : XM_001103896
Pan
sp. (Chimpanzee) : XM_001162602
Monodelphis
sp. (Opossum) : XM_001366581
Equus
sp. (Horse) : XM_001500595
Gallus
sp. (Chicken) : XM_415716
Canis
sp. (Dog) : XM_847352
HIX0039242
HIT000197296 (
NM_000250
)
(Myeloperoxidase; MPO; EC=1.11.2.2; Contains: Myeloperoxidase; Contains: 89 kDa myeloperoxidase; Contains: 84 kDa myeloperoxidase; Contains: Myeloperoxidase light chain; Contains: Myeloperoxidase heavy chain; Precursor;)
genome : 56,347,217 - 56,358,296 (11,080)
query : 1 - 3,215 (3,215/3,215)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.11.2.2
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, plas 7, E.R. 3.5, E.R._mito 3.5,
cysk_plas 3.5, cyto_plas 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039242)
HIX0039242
HIT000390266
(
BC130476
)
(Myeloperoxidase; MPO; EC=1.11.2.2; Contains: Myeloperoxidase; Contains: 89 kDa myeloperoxidase; Contains: 84 kDa myeloperoxidase; Contains: Myeloperoxidase light chain; Contains: Myeloperoxidase heavy chain; Precursor;)
genome : 56,347,657 - 56,358,170 (10,514)
query : 1 - 2,649 (2,649/2,649)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.11.2.2
InterPro :
IPR010255 : Haem peroxidase
IPR019791 : Haem peroxidase, animal
GO :
0004601 : Molecular Function : peroxidase activity
0006979 : Biological Process : response to oxidative stress
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, plas 7, E.R. 3.5, E.R._mito 3.5,
cysk_plas 3.5, cyto_plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039242)
HIX0039242
HIT000191081
(
J02694
)
(Myeloperoxidase; MPO; EC=1.11.2.2; Contains: Myeloperoxidase; Contains: 89 kDa myeloperoxidase; Contains: 84 kDa myeloperoxidase; Contains: Myeloperoxidase light chain; Contains: Myeloperoxidase heavy chain; Precursor;)
genome : 56,347,835 - 56,358,267 (10,433)
query : 1 - 2,568 (2,568/2,568)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.11.1.7
,
EC 1.11.2.2
KEGG pathway :
00360 : Phenylalanine metabolism (62)
00680 : Methane metabolism (75)
00940 : Phenylpropanoid biosynthesis (26)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR010255 : Haem peroxidase
IPR019791 : Haem peroxidase, animal
GO :
0004601 : Molecular Function : peroxidase activity
0006979 : Biological Process : response to oxidative stress
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, plas 7, E.R. 3.5, E.R._mito 3.5,
cysk_plas 3.5, cyto_plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039242)
HIX0039242
HIT000215817
(
S56200
)
(Myeloperoxidase; MPO; EC=1.11.2.2; Contains: Myeloperoxidase; Contains: 89 kDa myeloperoxidase; Contains: 84 kDa myeloperoxidase; Contains: Myeloperoxidase light chain; Contains: Myeloperoxidase heavy chain; Precursor;)
genome : 56,348,017 - 56,358,119 (10,103)
query : 1 - 2,238 (2,238/2,238)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.11.2.2
InterPro :
IPR010255 : Haem peroxidase
IPR019791 : Haem peroxidase, animal
GO :
0004601 : Molecular Function : peroxidase activity
0006979 : Biological Process : response to oxidative stress
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, plas 7, E.R. 3.5, E.R._mito 3.5,
cysk_plas 3.5, cyto_plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039242)
HIX0039242
HIT000689175 (
ENST00000577220
)
(Myeloperoxidase; MPO; EC=1.11.2.2; Contains: Myeloperoxidase; Contains: 89 kDa myeloperoxidase; Contains: 84 kDa myeloperoxidase; Contains: Myeloperoxidase light chain; Contains: Myeloperoxidase heavy chain; Precursor;)
genome : 56,348,090 - 56,350,853 (2,764)
query : 1 - 260 (260/260)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.11.2.2
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 10.5, cyto_nucl 9, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039242)
HIX0039242
HIT000690435 (
ENST00000578493
)
(Myeloperoxidase; MPO; EC=1.11.2.2; Contains: Myeloperoxidase; Contains: 89 kDa myeloperoxidase; Contains: 84 kDa myeloperoxidase; Contains: Myeloperoxidase light chain; Contains: Myeloperoxidase heavy chain; Precursor;)
genome : 56,352,932 - 56,355,480 (2,549)
query : 1 - 483 (483/483)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.11.2.2
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.5, cyto 9, nucl 8.5, cyto_mito 8.16667,
extr 8, cyto_pero 6.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039242)
HIX0039242
HIT000692932 (
ENST00000581022
)
(Myeloperoxidase; MPO; EC=1.11.2.2; Contains: Myeloperoxidase; Contains: 89 kDa myeloperoxidase; Contains: 84 kDa myeloperoxidase; Contains: Myeloperoxidase light chain; Contains: Myeloperoxidase heavy chain; Precursor;)
genome : 56,356,198 - 56,356,760 (563)
query : 1 - 481 (481/481)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.11.2.2
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039242)
HIX0039242
HIT000691925 (
ENST00000580005
)
(Myeloperoxidase; MPO; EC=1.11.2.2; Contains: Myeloperoxidase; Contains: 89 kDa myeloperoxidase; Contains: 84 kDa myeloperoxidase; Contains: Myeloperoxidase light chain; Contains: Myeloperoxidase heavy chain; Precursor;)
genome : 56,357,237 - 56,358,048 (812)
query : 1 - 398 (398/398)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.11.2.2
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039242)
HIX0014027
HIT000092389
(
BC031401
)
(Peripheral-type benzodiazepine receptor-associated protein 1 isoform b.)
genome : 56,378,595 - 56,383,228 (4,634)
query : 15 - 1,550 (1,536/1,640)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.991
InterPro :
IPR001452 : SH3 domain
IPR011511 : Variant SH3 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, extr 7, cyto 7, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014027)
HIX0014027
HIT000057410
(
BX648763
)
(Peripheral-type benzodiazepine receptor-associated protein 1 isoform b.)
genome : 56,378,595 - 56,382,749 (4,155)
query : 1 - 4,154 (4,154/4,177)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 10.5, cyto_nucl 10.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014027)
HIX0014027
HIT000063484
(
AF039571
)
Representative transcript
(Peripheral-type benzodiazepine receptor-associated protein 1; PRAX-1; Peripheral benzodiazepine receptor-interacting protein; PBR-IP; RIMS-binding protein 1; RIM-BP1;)
genome : 56,378,595 - 56,405,478 (26,884)
query : 1 - 7,014 (7,014/7,033)
32 exons
identity = 0.996
3'(0.987;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.998;1.000;1.000;1.000;
1.000;0.999;1.000;1.000;1.000;0.995;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;0.992)5'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR003961 : Fibronectin type III
IPR011511 : Variant SH3 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 18, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014027)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF199338
Mus
sp. (Mouse) : BC083181
Bos
sp. (Cow) : BC149472
Gallus
sp. (Chicken) : CR523124
Equus
sp. (Horse) : ENSECAT00000012973
Monodelphis
sp. (Opossum) : ENSMODT00000035943
Oryzias
sp. (Medaka) : ENSORLT00000013898
Pongo
sp. (Orangutan) : ENSPPYT00000009626
Tetraodon
sp. (Tetraodon) : GSTENT00016264001
Takifugu
sp. (Fugu) : SINFRUT00000143390
Macaca
sp. (Macaque) : XM_001103982
Canis
sp. (Dog) : XM_548232
Pan
sp. (Chimpanzee) : XR_024794
HIX0014027
HIT000435775
(
BC150279
)
(Peripheral-type benzodiazepine receptor-associated protein 1 isoform a.)
genome : 56,378,595 - 56,406,121 (27,527)
query : 1 - 7,480 (7,480/7,495)
31 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.986;
1.000;1.000;1.000;0.998;1.000;1.000;0.992;
1.000;0.998;1.000;1.000;1.000;0.995;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR003961 : Fibronectin type III
IPR011511 : Variant SH3 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 18.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014027)
HIX0014027
HIT000201492 (
NM_004758
)
(Peripheral-type benzodiazepine receptor-associated protein 1; PRAX-1; Peripheral benzodiazepine receptor-interacting protein; PBR-IP; RIMS-binding protein 1; RIM-BP1;)
genome : 56,378,588 - 56,406,152 (27,565)
query : 1 - 7,698 (7,698/7,698)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 18, cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014027)
HIX0014027
HIT000486251 (
NM_024418
)
(Peripheral-type benzodiazepine receptor-associated protein 1; PRAX-1; Peripheral benzodiazepine receptor-interacting protein; PBR-IP; RIMS-binding protein 1; RIM-BP1;)
genome : 56,378,588 - 56,406,152 (27,565)
query : 1 - 7,518 (7,518/7,518)
31 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 18.5, cyto 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014027)
HIX0014027
HIT000724440 (
NM_001261835
)
(Peripheral-type benzodiazepine receptor-associated protein 1; PRAX-1; Peripheral benzodiazepine receptor-interacting protein; PBR-IP; RIMS-binding protein 1; RIM-BP1;)
genome : 56,378,588 - 56,406,152 (27,565)
query : 1 - 7,671 (7,671/7,671)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 18, cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014027)
HIX0014027
HIT000110357 (
ENST00000268893
)
(Peripheral-type benzodiazepine receptor-associated protein 1; PRAX-1; Peripheral benzodiazepine receptor-interacting protein; PBR-IP; RIMS-binding protein 1; RIM-BP1;)
genome : 56,378,592 - 56,406,121 (27,530)
query : 1 - 7,483 (7,483/7,483)
31 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 18.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014027)
HIX0014027
HIT000693577 (
ENST00000581675
)
(Peripheral-type benzodiazepine receptor-associated protein 1 isoform b.)
genome : 56,378,592 - 56,383,228 (4,637)
query : 15 - 1,553 (1,539/1,553)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, extr 7, cyto 7, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014027)
HIX0014027
HIT000693594 (
ENST00000581692
)
(Peripheral-type benzodiazepine receptor-associated protein 1 isoform b.)
genome : 56,378,592 - 56,382,749 (4,158)
query : 1 - 4,158 (4,158/4,158)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 9.5, cyto_nucl 9.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014027)
HIX0014027
HIT000000337
(
AB014512
)
(Peripheral-type benzodiazepine receptor-associated protein 1 isoform a.)
genome : 56,378,596 - 56,406,121 (27,526)
query : 1 - 7,479 (7,479/7,479)
31 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.986;
1.000;1.000;1.000;0.998;1.000;1.000;0.992;
1.000;0.998;1.000;1.000;1.000;0.995;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 18.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014027)
HIX0014027
HIT000309807 (
ENST00000355701
)
(Peripheral-type benzodiazepine receptor-associated protein 1 isoform a.)
genome : 56,378,598 - 56,406,152 (27,555)
query : 1 - 7,626 (7,626/7,626)
31 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 18.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014027)
HIX0014027
HIT000690453 (
ENST00000578511
)
(Peripheral-type benzodiazepine receptor-associated protein 1 isoform c.)
genome : 56,379,213 - 56,384,228 (5,016)
query : 1 - 1,504 (1,504/1,504)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 12.5, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014027)
HIX0014027
HIT000136366 (
ENST00000343736
)
(Peripheral-type benzodiazepine receptor-associated protein 1; PRAX-1; Peripheral benzodiazepine receptor-interacting protein; PBR-IP; RIMS-binding protein 1; RIM-BP1;)
genome : 56,379,632 - 56,405,445 (25,814)
query : 1 - 5,947 (5,947/5,947)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 18, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014027)
HIX0014027
HIT000503109
(
BC146852
)
(Peripheral-type benzodiazepine receptor-associated protein 1; PRAX-1; Peripheral benzodiazepine receptor-interacting protein; PBR-IP; RIMS-binding protein 1; RIM-BP1;)
genome : 56,379,632 - 56,405,445 (25,814)
query : 1 - 5,947 (5,947/5,947)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;0.990;1.000;1.000;
1.000;1.000;1.000;0.999;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR003961 : Fibronectin type III
IPR011511 : Variant SH3 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 18, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014027)
HIX0014027
HIT000503518
(
BC171787
)
(Peripheral-type benzodiazepine receptor-associated protein 1; PRAX-1; Peripheral benzodiazepine receptor-interacting protein; PBR-IP; RIMS-binding protein 1; RIM-BP1;)
genome : 56,379,632 - 56,405,445 (25,814)
query : 1 - 5,920 (5,920/5,920)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.991;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR003961 : Fibronectin type III
IPR011511 : Variant SH3 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 18, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014027)
HIX0014027
HIT000689821 (
ENST00000577871
)
(Peripheral-type benzodiazepine receptor-associated protein 1 isoform b.)
genome : 56,379,646 - 56,383,790 (4,145)
query : 1 - 746 (746/746)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014027)
HIX0014027
HIT000692580 (
ENST00000580669
)
(Peripheral-type benzodiazepine receptor-associated protein 1 isoform b.)
genome : 56,382,422 - 56,385,924 (3,503)
query : 1 - 809 (809/809)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014027)
HIX0014027
HIT000694569 (
ENST00000582679
)
(Peripheral-type benzodiazepine receptor-associated protein 1 isoform b.)
genome : 56,383,703 - 56,388,101 (4,399)
query : 1 - 887 (887/887)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014027)
HIX0014027
HIT000690428 (
ENST00000578486
)
(Peripheral-type benzodiazepine receptor-associated protein 1 isoform b.)
genome : 56,384,804 - 56,385,952 (1,149)
query : 1 - 471 (471/471)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 12.5, extr 6, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014027)
HIX0014027
HIT000697007 (
ENST00000585149
)
(Peripheral-type benzodiazepine receptor-associated protein 1 isoform b.)
genome : 56,388,800 - 56,389,349 (550)
query : 1 - 381 (381/381)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, cyto 9, nucl 5, cyto_mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014027)
HIX0014027
HIT000695505 (
ENST00000583624
)
(Conserved hypothetical protein.)
genome : 56,399,433 - 56,400,082 (650)
query : 1 - 409 (409/409)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12.1667, extr 10, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014027)
HIX0014028
HIT000660342 (
NR_038410
)
(Peripheral-type benzodiazepine receptor-associated protein 1 isoform c.)
genome : 56,402,811 - 56,431,088 (28,278)
query : 1 - 2,483 (2,483/2,500)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 10, nucl 8.5, extr_plas 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000015752
(
AK090885
)
Representative transcript
(Peripheral-type benzodiazepine receptor-associated protein 1 isoform c.)
genome : 56,402,811 - 56,430,647 (27,837)
query : 1 - 2,041 (2,041/2,041)
5 exons
identity = 0.998
5'(1.000;1.000;0.996;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 10, nucl 8.5, extr_plas 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000691455 (
ENST00000579527
)
(Peripheral-type benzodiazepine receptor-associated protein 1 isoform c.)
genome : 56,402,811 - 56,430,647 (27,837)
query : 1 - 2,042 (2,042/2,042)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 10, nucl 8.5, extr_plas 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000660343 (
NR_038411
)
(Hypothetical short protein.)
genome : 56,406,299 - 56,431,088 (24,790)
query : 1 - 2,278 (2,278/2,295)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, mito 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000660344 (
NR_038412
)
(Hypothetical short protein.)
genome : 56,406,299 - 56,431,088 (24,790)
query : 1 - 2,269 (2,269/2,286)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, mito 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000430177
(
AK311311
)
(Formin-like protein 5; OsFH5;)
genome : 56,406,299 - 56,429,790 (23,492)
query : 1 - 980 (980/980)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, extr 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000692430 (
ENST00000580515
)
(Formin-like protein 5; OsFH5;)
genome : 56,406,299 - 56,429,790 (23,492)
query : 1 - 980 (980/980)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, extr 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000430074
(
AK311208
)
(Formin-like protein 5; OsFH5;)
genome : 56,406,376 - 56,429,852 (23,477)
query : 11 - 966 (956/966)
4 exons
identity = 0.997
5'(1.000;1.000;1.000;0.994)3'
coverage = 0.990
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, extr 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000690278 (
ENST00000578334
)
(Hypothetical short protein.)
genome : 56,406,376 - 56,429,852 (23,477)
query : 1 - 956 (956/956)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, mito 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000660345 (
NR_038413
)
(Hypothetical short protein.)
genome : 56,406,966 - 56,431,088 (24,123)
query : 1 - 2,201 (2,201/2,218)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, mito 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000692544 (
ENST00000580633
)
(Formin-like protein 5; OsFH5;)
genome : 56,406,966 - 56,429,738 (22,773)
query : 1 - 842 (842/842)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, extr 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0224815
HIT000690939 (
ENST00000579003
)
(Conserved hypothetical protein.)
genome : 56,408,245 - 56,409,869 (1,625)
query : 1 - 1,625 (1,625/1,625)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224815)
HIX0157697
HIT000470794 (
ENST00000384835
)
(Non-protein coding transcript.)
genome : 56,408,593 - 56,408,679 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0157697)
HIX0157697
HIT000658061 (
NR_029683
)
(Non-protein coding transcript.)
genome : 56,408,593 - 56,408,679 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0157697)
HIX0224476
HIT000693494 (
ENST00000581591
)
(Non-protein coding transcript.)
genome : 56,413,337 - 56,413,383 (47)
query : 1 - 47 (47/47)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224476)
HIX0224476
HIT000725952 (
NR_039889
)
(Non-protein coding transcript.)
genome : 56,413,337 - 56,413,383 (47)
query : 1 - 47 (47/47)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224476)
HIX0014028
HIT000660346 (
NR_038414
)
(Transcription elongation factor SPT4; hSPT4; DRB sensitivity-inducing factor 14 kDa subunit; DSIF p14; DRB sensitivity-inducing factor small subunit; DSIF small subunit;)
genome : 56,414,563 - 56,431,088 (16,526)
query : 1 - 2,451 (2,451/2,468)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, nucl 3.5, cyto_nucl 3, extr 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000660347 (
NR_038415
)
(Formin-like protein 5; OsFH5;)
genome : 56,414,563 - 56,431,088 (16,526)
query : 1 - 2,387 (2,387/2,404)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, nucl 3.5, cyto_nucl 3, extr 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000660348 (
NR_038416
)
(Formin-like protein 5; OsFH5;)
genome : 56,414,563 - 56,431,088 (16,526)
query : 1 - 2,378 (2,378/2,395)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, nucl 3.5, cyto_nucl 3, extr 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000660349 (
NR_038417
)
(Hypothetical short protein.)
genome : 56,414,563 - 56,431,088 (16,526)
query : 1 - 2,250 (2,250/2,267)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, mito 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000660350 (
NR_038418
)
(Hypothetical short protein.)
genome : 56,414,563 - 56,431,088 (16,526)
query : 1 - 2,241 (2,241/2,258)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, mito 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000430172
(
AK311306
)
(Formin-like protein 5; OsFH5;)
genome : 56,414,564 - 56,429,852 (15,289)
query : 1 - 1,004 (1,004/1,004)
4 exons
identity = 0.997
5'(1.000;0.996;1.000;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, extr 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000695704 (
ENST00000583826
)
(Hypothetical short protein.)
genome : 56,414,564 - 56,429,852 (15,289)
query : 1 - 1,004 (1,004/1,004)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, mito 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000261484
(
BC064565
)
(Hypothetical short protein.)
genome : 56,414,576 - 56,431,080 (16,505)
query : 1 - 2,230 (2,230/2,278)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, mito 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000689972 (
ENST00000578025
)
(Hypothetical short protein.)
genome : 56,414,576 - 56,431,080 (16,505)
query : 1 - 2,229 (2,229/2,229)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, mito 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000695719 (
ENST00000583841
)
(E3 ubiquitin-protein ligase RNF43 precursor.)
genome : 56,414,607 - 56,493,127 (78,521)
query : 1 - 840 (840/840)
3 exons
identity = 0.992
5'(1.000;0.972;0.987)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 10, mito 3, cyto 2, golg 2, cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000002746
(
AK000271
)
(Transcription elongation factor SPT4; hSPT4; DRB sensitivity-inducing factor 14 kDa subunit; DSIF p14; DRB sensitivity-inducing factor small subunit; DSIF small subunit;)
genome : 56,414,669 - 56,431,080 (16,412)
query : 1 - 2,337 (2,337/2,364)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, nucl 3.5, cyto_nucl 3, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000691942 (
ENST00000580022
)
(Transcription elongation factor SPT4; hSPT4; DRB sensitivity-inducing factor 14 kDa subunit; DSIF p14; DRB sensitivity-inducing factor small subunit; DSIF small subunit;)
genome : 56,414,669 - 56,431,080 (16,412)
query : 1 - 2,337 (2,337/2,337)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, nucl 3.5, cyto_nucl 3, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000694242 (
ENST00000582348
)
(Hypothetical protein.)
genome : 56,414,697 - 56,416,808 (2,112)
query : 1 - 549 (549/558)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.984
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 8, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000099185
(
BC050403
)
(Formin-like protein 5; OsFH5;)
genome : 56,414,710 - 56,430,648 (15,939)
query : 1 - 1,791 (1,791/1,816)
3 exons
identity = 0.999
5'(1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 8, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000697094 (
ENST00000585236
)
(Formin-like protein 5; OsFH5;)
genome : 56,414,710 - 56,430,648 (15,939)
query : 1 - 1,791 (1,791/1,791)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 8, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000092675
(
BC032475
)
(Formin-like protein 5; OsFH5;)
genome : 56,414,719 - 56,430,648 (15,930)
query : 1 - 1,791 (1,791/1,843)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 8, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014028
HIT000691781 (
ENST00000579859
)
(Formin-like protein 5; OsFH5;)
genome : 56,414,719 - 56,430,648 (15,930)
query : 1 - 1,791 (1,791/1,791)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 8, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014028)
HIX0014029
HIT000200026 (
NM_003168
)
(Transcription elongation factor SPT4; hSPT4; DRB sensitivity-inducing factor 14 kDa subunit; DSIF p14; DRB sensitivity-inducing factor small subunit; DSIF small subunit;)
genome : 56,422,536 - 56,429,599 (7,064)
query : 1 - 1,528 (1,528/1,545)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014029)
HIX0014029
HIT000727604 (
NR_073470
)
(Transcription elongation factor SPT4; hSPT4; DRB sensitivity-inducing factor 14 kDa subunit; DSIF p14; DRB sensitivity-inducing factor small subunit; DSIF small subunit;)
genome : 56,422,536 - 56,429,599 (7,064)
query : 1 - 1,530 (1,530/1,547)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 12, cyto 11, extr 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014029)
HIX0014029
HIT000219902
(
U43923
)
Representative transcript
(Transcription elongation factor SPT4; hSPT4; DRB sensitivity-inducing factor 14 kDa subunit; DSIF p14; DRB sensitivity-inducing factor small subunit; DSIF small subunit;)
genome : 56,422,539 - 56,429,563 (7,025)
query : 1 - 1,489 (1,489/1,499)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR016046 : Transcription initiation Spt4-like
IPR022800 : Spt4/RpoE2 zinc finger
IPR029040 : RNA polymerase subunit RPABC4/transcription elongation factor Spt4
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014029)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168256
Mus
sp. (Mouse) : AK146235
Bos
sp. (Cow) : BC103340
Gallus
sp. (Chicken) : CR388919
Tetraodon
sp. (Tetraodon) : CR707512
Pongo
sp. (Orangutan) : CR857182
Equus
sp. (Horse) : ENSECAT00000017502
Oryzias
sp. (Medaka) : ENSORLT00000013922
Takifugu
sp. (Fugu) : SINFRUT00000138917
Rattus
sp. (Rat) : XM_001081172
Monodelphis
sp. (Opossum) : XM_001362997
Canis
sp. (Dog) : XM_848063
HIX0014029
HIT000103895 (
ENST00000225504
)
(Transcription elongation factor SPT4; hSPT4; DRB sensitivity-inducing factor 14 kDa subunit; DSIF p14; DRB sensitivity-inducing factor small subunit; DSIF small subunit;)
genome : 56,422,539 - 56,429,563 (7,025)
query : 1 - 1,489 (1,489/1,489)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014029)
HIX0014029
HIT000693073 (
ENST00000581166
)
(Transcription elongation factor SPT4; hSPT4; DRB sensitivity-inducing factor 14 kDa subunit; DSIF p14; DRB sensitivity-inducing factor small subunit; DSIF small subunit;)
genome : 56,422,539 - 56,429,528 (6,990)
query : 1 - 1,398 (1,398/1,398)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014029)
HIX0014029
HIT000219608
(
U38818
)
(Transcription elongation factor SPT4; hSPT4; DRB sensitivity-inducing factor 14 kDa subunit; DSIF p14; DRB sensitivity-inducing factor small subunit; DSIF small subunit;)
genome : 56,422,561 - 56,429,557 (6,997)
query : 1 - 1,461 (1,461/1,470)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.994
InterPro :
IPR016046 : Transcription initiation Spt4-like
IPR022800 : Spt4/RpoE2 zinc finger
IPR029040 : RNA polymerase subunit RPABC4/transcription elongation factor Spt4
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014029)
HIX0014029
HIT000049029
(
AK129758
)
(Transcription elongation factor SPT4; hSPT4; DRB sensitivity-inducing factor 14 kDa subunit; DSIF p14; DRB sensitivity-inducing factor small subunit; DSIF small subunit;)
genome : 56,422,555 - 56,429,570 (7,016)
query : 1 - 1,138 (1,138/1,138)
5 exons
identity = 0.996
3'(0.995;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR016046 : Transcription initiation Spt4-like
IPR022800 : Spt4/RpoE2 zinc finger
IPR029040 : RNA polymerase subunit RPABC4/transcription elongation factor Spt4
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014029)
HIX0014029
HIT000689350 (
ENST00000577396
)
(Transcription elongation factor SPT4; hSPT4; DRB sensitivity-inducing factor 14 kDa subunit; DSIF p14; DRB sensitivity-inducing factor small subunit; DSIF small subunit;)
genome : 56,422,608 - 56,429,784 (7,177)
query : 1 - 1,643 (1,643/1,643)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 12, cyto 11, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014029)
HIX0014029
HIT000219607
(
U38817
)
(Transcription elongation factor SPT4; hSPT4; DRB sensitivity-inducing factor 14 kDa subunit; DSIF p14; DRB sensitivity-inducing factor small subunit; DSIF small subunit;)
genome : 56,423,275 - 56,429,534 (6,260)
query : 5 - 728 (724/744)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.991)5'
coverage = 0.973
InterPro :
IPR016046 : Transcription initiation Spt4-like
IPR022800 : Spt4/RpoE2 zinc finger
IPR029040 : RNA polymerase subunit RPABC4/transcription elongation factor Spt4
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014029)
HIX0014029
HIT000031197
(
BC002802
)
(Transcription elongation factor SPT4; hSPT4; DRB sensitivity-inducing factor 14 kDa subunit; DSIF p14; DRB sensitivity-inducing factor small subunit; DSIF small subunit;)
genome : 56,423,285 - 56,429,557 (6,273)
query : 1 - 737 (737/755)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR016046 : Transcription initiation Spt4-like
IPR022800 : Spt4/RpoE2 zinc finger
IPR029040 : RNA polymerase subunit RPABC4/transcription elongation factor Spt4
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014029)
HIX0014029
HIT000693111 (
ENST00000581204
)
(Transcription elongation factor SPT4; hSPT4; DRB sensitivity-inducing factor 14 kDa subunit; DSIF p14; DRB sensitivity-inducing factor small subunit; DSIF small subunit;)
genome : 56,423,273 - 56,424,972 (1,700)
query : 1 - 539 (539/539)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 9, cyto 8, cyto_nucl 8, mito 7, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014029)
HIX0014029
HIT000693443 (
ENST00000581540
)
(Transcription elongation factor SPT4; hSPT4; DRB sensitivity-inducing factor 14 kDa subunit; DSIF p14; DRB sensitivity-inducing factor small subunit; DSIF small subunit;)
genome : 56,423,377 - 56,429,022 (5,646)
query : 1 - 668 (668/668)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 6, cyto_nucl 6, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014029)
HIX0014029
HIT000430852
(
AK311986
)
(Transcription elongation factor SPT4; hSPT4; DRB sensitivity-inducing factor 14 kDa subunit; DSIF p14; DRB sensitivity-inducing factor small subunit; DSIF small subunit;)
genome : 56,423,607 - 56,429,512 (5,906)
query : 1 - 370 (370/370)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR016046 : Transcription initiation Spt4-like
IPR022800 : Spt4/RpoE2 zinc finger
IPR029040 : RNA polymerase subunit RPABC4/transcription elongation factor Spt4
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014029)
HIX0014029
HIT000267160
(
CR407663
)
(Transcription elongation factor SPT4; hSPT4; DRB sensitivity-inducing factor 14 kDa subunit; DSIF p14; DRB sensitivity-inducing factor small subunit; DSIF small subunit;)
genome : 56,423,610 - 56,429,496 (5,887)
query : 1 - 351 (351/351)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR016046 : Transcription initiation Spt4-like
IPR022800 : Spt4/RpoE2 zinc finger
IPR029040 : RNA polymerase subunit RPABC4/transcription elongation factor Spt4
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014029)
HIX0014029
HIT000691218 (
ENST00000579289
)
(Transcription elongation factor SPT4; hSPT4; DRB sensitivity-inducing factor 14 kDa subunit; DSIF p14; DRB sensitivity-inducing factor small subunit; DSIF small subunit;)
genome : 56,424,561 - 56,429,497 (4,937)
query : 1 - 318 (318/318)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014029)
HIX0202404
HIT000206633 (
NM_017763
)
(E3 ubiquitin-protein ligase RNF43; EC=6.3.2.-; RING finger protein 43; Precursor;)
genome : 56,431,039 - 56,494,931 (63,893)
query : 1 - 4,556 (4,556/4,573)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, cyto_pero 6.66667, plas 6.5, extr_plas 6,
extr 4.5, E.R. 4, pero 3.5, mito_pero 3.33333,
cysk_plas 3.33333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202404)
HIX0202404
HIT000002797
(
AK000322
)
(E3 ubiquitin-protein ligase RNF43; EC=6.3.2.-; RING finger protein 43; Precursor;)
genome : 56,431,039 - 56,493,100 (62,062)
query : 7 - 3,785 (3,779/3,802)
9 exons
identity = 0.997
3'(1.000;0.999;0.990;1.000;1.000;1.000;1.000;
0.992;0.986)5'
coverage = 0.998
EC number :
EC 6.3.2.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, cyto_pero 6.66667, plas 6.5, extr_plas 6,
extr 4.5, E.R. 4, pero 3.5, mito_pero 3.33333,
cysk_plas 3.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202404)
HIX0202404
HIT000306191
(
CR627423
)
(E3 ubiquitin-protein ligase RNF43; EC=6.3.2.-; RING finger protein 43; Precursor;)
genome : 56,431,039 - 56,494,943 (63,905)
query : 1 - 4,365 (4,365/4,380)
10 exons
identity = 0.999
3'(1.000;0.999;1.000;1.000;1.000;1.000;1.000;
1.000;0.991;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, cyto_pero 6.66667, plas 6.5, extr_plas 6,
extr 4.5, E.R. 4, pero 3.5, mito_pero 3.33333,
cysk_plas 3.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202404)
HIX0202404
HIT000306297
(
CR749257
)
Representative transcript
(E3 ubiquitin-protein ligase RNF43; EC=6.3.2.-; RING finger protein 43; Precursor;)
genome : 56,431,039 - 56,494,894 (63,856)
query : 1 - 5,573 (5,573/5,585)
9 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.997)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, cyto_pero 6.66667, plas 6.5, extr_plas 6,
extr 4.5, E.R. 4, pero 3.5, mito_pero 3.33333,
cysk_plas 3.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202404)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK028750
Bos
sp. (Cow) : ENSBTAT00000026797
Gallus
sp. (Chicken) : ENSGALT00000001524
Oryzias
sp. (Medaka) : ENSORLT00000013927
Pongo
sp. (Orangutan) : ENSPPYT00000009624
Rattus
sp. (Rat) : ENSRNOT00000010296
Tetraodon
sp. (Tetraodon) : GSTENT00016270001
Takifugu
sp. (Fugu) : SINFRUT00000127417
Pan
sp. (Chimpanzee) : XM_001172611
Monodelphis
sp. (Opossum) : XM_001362915
Equus
sp. (Horse) : XM_001503701
Canis
sp. (Dog) : XM_548234
Danio
sp. (Zebrafish) : XM_696041
HIX0202404
HIT000689666 (
ENST00000577716
)
(E3 ubiquitin-protein ligase RNF43; EC=6.3.2.-; RING finger protein 43; Precursor;)
genome : 56,431,037 - 56,494,943 (63,907)
query : 1 - 4,367 (4,367/4,367)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.991;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, cyto_pero 6.66667, plas 6.5, extr_plas 6,
extr 4.5, E.R. 4, pero 3.5, mito_pero 3.33333,
cysk_plas 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202404)
HIX0202404
HIT000696306 (
ENST00000584437
)
(E3 ubiquitin-protein ligase RNF43; EC=6.3.2.-; RING finger protein 43; Precursor;)
genome : 56,431,037 - 56,494,894 (63,858)
query : 1 - 5,575 (5,575/5,575)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, cyto_pero 6.66667, plas 6.5, extr_plas 6,
extr 4.5, E.R. 4, pero 3.5, mito_pero 3.33333,
cysk_plas 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202404)
HIX0202404
HIT000695631 (
ENST00000583753
)
(E3 ubiquitin-protein ligase RNF43; EC=6.3.2.-; RING finger protein 43; Precursor;)
genome : 56,431,037 - 56,493,002 (61,966)
query : 1 - 3,560 (3,560/3,560)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.988)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, cyto_pero 6.66667, plas 6.5, extr_plas 6,
extr 4.5, E.R. 4, pero 3.5, mito_pero 3.33333,
cysk_plas 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202404)
HIX0202404
HIT000491393
(
AK296769
)
(E3 ubiquitin-protein ligase RNF43 precursor.)
genome : 56,431,968 - 56,493,002 (61,035)
query : 1 - 2,629 (2,629/2,629)
8 exons
identity = 0.997
3'(1.000;0.999;1.000;0.994;0.990;1.000;1.000;
0.988)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, cyto_pero 6.66667, plas 6.5, extr_plas 6,
extr 4.5, E.R. 4, pero 3.5, mito_pero 3.33333,
cysk_plas 3.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202404)
HIX0202404
HIT000423824
(
AK291027
)
(E3 ubiquitin-protein ligase RNF43; EC=6.3.2.-; RING finger protein 43; Precursor;)
genome : 56,432,017 - 56,494,713 (62,697)
query : 1 - 3,360 (3,360/3,360)
10 exons
identity = 0.998
3'(1.000;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;0.992;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, cyto_pero 6.66667, plas 6.5, extr_plas 6,
extr 4.5, E.R. 4, pero 3.5, mito_pero 3.33333,
cysk_plas 3.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202404)
HIX0202404
HIT000339197
(
BC109028
)
(E3 ubiquitin-protein ligase RNF43; EC=6.3.2.-; RING finger protein 43; Precursor;)
genome : 56,432,144 - 56,493,135 (60,992)
query : 1 - 2,709 (2,709/2,709)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.991)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, cyto_pero 6.66667, plas 6.5, extr_plas 6,
extr 4.5, E.R. 4, pero 3.5, mito_pero 3.33333,
cysk_plas 3.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202404)
HIX0202404
HIT000493648
(
AK299024
)
(E3 ubiquitin-protein ligase RNF43 precursor.)
genome : 56,432,288 - 56,480,082 (47,795)
query : 1 - 2,198 (2,198/2,198)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, E.R. 7, cyto_pero 7, nucl 5, cyto_mito 5,
cyto_golg 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202404)
HIX0202404
HIT000689575 (
ENST00000577625
)
(E3 ubiquitin-protein ligase RNF43 precursor.)
genome : 56,432,288 - 56,480,082 (47,795)
query : 1 - 2,198 (2,198/2,198)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, E.R. 7, cyto_pero 7, nucl 5, cyto_mito 5,
cyto_golg 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202404)
HIX0202404
HIT000428163
(
AK309297
)
(E3 ubiquitin-protein ligase RNF43 precursor.)
genome : 56,434,344 - 56,494,446 (60,103)
query : 1 - 2,610 (2,610/2,610)
8 exons
identity = 0.999
3'(0.999;1.000;0.994;1.000;1.000;1.000;0.992;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 9, plas 6.5, nucl 4.5, pero 4,
extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202404)
HIX0202404
HIT000693768 (
ENST00000581868
)
(E3 ubiquitin-protein ligase RNF43 precursor.)
genome : 56,434,344 - 56,494,446 (60,103)
query : 1 - 2,610 (2,610/2,610)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 9, plas 6.5, nucl 4.5, pero 4,
extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202404)
HIX0202404
HIT000493413
(
AK298789
)
(E3 ubiquitin-protein ligase RNF43 precursor.)
genome : 56,434,509 - 56,439,952 (5,444)
query : 1 - 1,989 (1,989/1,989)
4 exons
identity = 0.999
3'(0.999;1.000;0.994;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 17, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202404)
HIX0202404
HIT000694187 (
ENST00000582293
)
(E3 ubiquitin-protein ligase RNF43 precursor.)
genome : 56,440,511 - 56,440,953 (443)
query : 1 - 324 (324/324)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 11.5, extr 7, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202404)
HIX0202404
HIT000691934 (
ENST00000580014
)
(Hypothetical short protein.)
genome : 56,494,374 - 56,494,956 (583)
query : 1 - 497 (497/497)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 6, cyto 3, mito 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202404)
HIX0202468
HIT000092895
(
BC033020
)
Representative transcript
(Heat shock factor protein 5; HSF 5; Heat shock transcription factor 5; HSTF 5; Protein expressed in male leptotene and zygotene spermatocytes 220; MLZ-220;)
genome : 56,497,528 - 56,565,745 (68,218)
query : 5 - 4,098 (4,094/4,113)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;0.989;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000232 : Heat shock factor (HSF)-type, DNA-binding
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR027725 : Heat shock transcription factor family
IPR027736 : Heat shock factor protein 5
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 11.1667, mito 9, cyto 6.5,
cyto_pero 5.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202468)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : ENSGALT00000001528
Pongo
sp. (Orangutan) : ENSPPYT00000009623
Rattus
sp. (Rat) : ENSRNOT00000009981
Monodelphis
sp. (Opossum) : XM_001366475
Pan
sp. (Chimpanzee) : XM_511908
Canis
sp. (Dog) : XM_847376
Macaca
sp. (Macaque) : XR_012997
Bos
sp. (Cow) : XR_028025
HIX0202468
HIT000092892
(
BC033017
)
(Heat shock factor protein 5; HSF 5; Heat shock transcription factor 5; HSTF 5; Protein expressed in male leptotene and zygotene spermatocytes 220; MLZ-220;)
genome : 56,497,528 - 56,565,725 (68,198)
query : 1 - 4,075 (4,075/4,090)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;0.989;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR000232 : Heat shock factor (HSF)-type, DNA-binding
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR027725 : Heat shock transcription factor family
IPR027736 : Heat shock factor protein 5
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 11.1667, mito 9, cyto 6.5,
cyto_pero 5.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202468)
HIX0202468
HIT000025673
(
AL137385
)
(Hypothetical short protein.)
genome : 56,497,528 - 56,499,665 (2,138)
query : 1 - 2,138 (2,138/2,148)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, cyto_nucl 3, nucl 2.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202468)
HIX0202468
HIT000123614 (
ENST00000323777
)
(Heat shock factor protein 5; HSF 5; Heat shock transcription factor 5; HSTF 5; Protein expressed in male leptotene and zygotene spermatocytes 220; MLZ-220;)
genome : 56,497,528 - 56,565,745 (68,218)
query : 1 - 4,094 (4,094/4,094)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 11.1667, mito 9, cyto 6.5,
cyto_pero 5.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202468)
HIX0202468
HIT000398028 (
NM_001080439
)
(Heat shock factor protein 5; HSF 5; Heat shock transcription factor 5; HSTF 5; Protein expressed in male leptotene and zygotene spermatocytes 220; MLZ-220;)
genome : 56,497,529 - 56,565,759 (68,231)
query : 1 - 4,107 (4,107/4,107)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 11.1667, mito 9, cyto 6.5,
cyto_pero 5.33333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202468)
HIX0202468
HIT000387360
(
BC115385
)
(Heat shock factor protein 5; HSF 5; Heat shock transcription factor 5; HSTF 5; Protein expressed in male leptotene and zygotene spermatocytes 220; MLZ-220;)
genome : 56,498,136 - 56,565,701 (67,566)
query : 1 - 3,079 (3,079/3,079)
6 exons
identity = 0.995
3'(1.000;1.000;1.000;0.989;1.000;0.949)5'
coverage = 1.000
InterPro :
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR027725 : Heat shock transcription factor family
IPR027736 : Heat shock factor protein 5
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 10.6667, mito 9, cyto 6.5,
cyto_pero 5.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202468)
HIX0202468
HIT000387361
(
BC115386
)
(Heat shock factor protein 5; HSF 5; Heat shock transcription factor 5; HSTF 5; Protein expressed in male leptotene and zygotene spermatocytes 220; MLZ-220;)
genome : 56,498,136 - 56,565,701 (67,566)
query : 1 - 3,075 (3,075/3,075)
6 exons
identity = 0.996
3'(1.000;1.000;1.000;0.989;1.000;0.952)5'
coverage = 1.000
InterPro :
IPR027725 : Heat shock transcription factor family
IPR027736 : Heat shock factor protein 5
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 15, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202468)
HIX0224883
HIT000693104 (
ENST00000581197
)
(Non-protein coding transcript.)
genome : 56,533,485 - 56,533,575 (91)
query : 1 - 91 (91/91)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224883)
HIX0202636
HIT000693628 (
ENST00000581726
)
(Nucleosome assembly protein (NAP) family protein.)
genome : 56,553,499 - 56,554,311 (813)
query : 1 - 813 (813/813)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto_nucl 3, nucl 2.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202636)
HIX0202636
pHIT000029891 ( pHIT000029891 )
Representative transcript
(Conserved hypothetical protein.)
genome : 56,553,978 - 56,565,045 (11,068)
query : 1 - 552 (552/552)
2 exons
InterPro :
IPR002164 : Nucleosome assembly protein (NAP)
GO :
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202636)
CAGE tag :
H04BA98A2005
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : XM_001079451
Pan
sp. (Chimpanzee) : XR_022374
HIX0202387
HIT000051439
(
BC035609
)
Representative transcript
(Myotubularin-related protein 4; EC=3.1.3.48; FYVE domain-containing dual specificity protein phosphatase 2; FYVE-DSP2; Zinc finger FYVE domain-containing protein 11;)
genome : 56,566,898 - 56,595,212 (28,315)
query : 1 - 5,785 (5,785/5,840)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
InterPro :
IPR000306 : FYVE zinc finger
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR010569 : Myotubularin-like phosphatase domain
IPR011011 : Zinc finger, FYVE/PHD-type
IPR016130 : Protein-tyrosine phosphatase, active site
IPR017455 : Zinc finger, FYVE-related
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16.5, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202387)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF262986
Bos
sp. (Cow) : BC148962
Tetraodon
sp. (Tetraodon) : CR708755
Oryzias
sp. (Medaka) : ENSORLT00000014091
Pongo
sp. (Orangutan) : ENSPPYT00000009622
Takifugu
sp. (Fugu) : SINFRUT00000172648
Takifugu
sp. (Fugu) : SINFRUT00000173287
Monodelphis
sp. (Opossum) : XM_001366419
Equus
sp. (Horse) : XM_001500609
Pan
sp. (Chimpanzee) : XM_511909
Danio
sp. (Zebrafish) : XM_692082
Canis
sp. (Dog) : XM_861901
HIX0202387
HIT000201425 (
NM_004687
)
(Myotubularin-related protein 4; EC=3.1.3.48; FYVE domain-containing dual specificity protein phosphatase 2; FYVE-DSP2; Zinc finger FYVE domain-containing protein 11;)
genome : 56,566,893 - 56,595,251 (28,359)
query : 1 - 5,829 (5,829/5,847)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 17, cyto 12
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202387)
HIX0202387
HIT000000372
(
AB014547
)
(Myotubularin-related protein 4; EC=3.1.3.48; FYVE domain-containing dual specificity protein phosphatase 2; FYVE-DSP2; Zinc finger FYVE domain-containing protein 11;)
genome : 56,566,893 - 56,590,303 (23,411)
query : 3 - 5,719 (5,717/5,719)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.990;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 17, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202387)
HIX0202387
HIT000123504 (
ENST00000323456
)
(Myotubularin-related protein 4; EC=3.1.3.48; FYVE domain-containing dual specificity protein phosphatase 2; FYVE-DSP2; Zinc finger FYVE domain-containing protein 11;)
genome : 56,566,898 - 56,595,266 (28,369)
query : 1 - 5,839 (5,839/5,839)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 17, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202387)
HIX0202387
HIT000691845 (
ENST00000579925
)
(Myotubularin-related protein 4.)
genome : 56,566,898 - 56,595,212 (28,315)
query : 1 - 5,614 (5,614/5,614)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 17, cyto 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202387)
HIX0202387
HIT000690205 (
ENST00000578259
)
(Myotubularin-related protein 4.)
genome : 56,568,842 - 56,570,099 (1,258)
query : 1 - 588 (588/588)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 10, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202387)
HIX0202387
HIT000075526
(
AF264717
)
(Myotubularin-related protein 4; EC=3.1.3.48; FYVE domain-containing dual specificity protein phosphatase 2; FYVE-DSP2; Zinc finger FYVE domain-containing protein 11;)
genome : 56,569,013 - 56,593,980 (24,968)
query : 17 - 3,652 (3,636/3,652)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.990;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.996
EC number :
EC 3.1.3.48
InterPro :
IPR000306 : FYVE zinc finger
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR010569 : Myotubularin-like phosphatase domain
IPR011011 : Zinc finger, FYVE/PHD-type
IPR016130 : Protein-tyrosine phosphatase, active site
IPR017455 : Zinc finger, FYVE-related
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 17, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202387)
HIX0202387
HIT000692893 (
ENST00000580983
)
(Myotubularin-related protein 4.)
genome : 56,585,346 - 56,588,872 (3,527)
query : 1 - 631 (631/631)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 11, nucl 8, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202387)
HIX0202387
HIT000694553 (
ENST00000582663
)
(Myotubularin-related protein 4.)
genome : 56,585,529 - 56,595,216 (9,688)
query : 1 - 572 (572/572)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, extr 5, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202387)
HIX0202387
HIT000695843 (
ENST00000583966
)
(Myotubularin-related protein 4.)
genome : 56,585,683 - 56,586,237 (555)
query : 1 - 439 (439/439)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202387)
HIX0202387
HIT000695536 (
ENST00000583656
)
(Myotubularin-related protein 4.)
genome : 56,585,829 - 56,591,985 (6,157)
query : 1 - 810 (810/810)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 7, cyto_nucl 7, mito 6, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202387)
HIX0202387
HIT000427743
(
AK308877
)
(Myotubularin-related protein 4.)
genome : 56,587,958 - 56,591,985 (4,028)
query : 1 - 1,281 (1,281/1,281)
5 exons
identity = 0.999
3'(1.000;0.999;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 7, cyto 6, extr_plas 6, mito_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202387)
HIX0202387
HIT000694282 (
ENST00000582390
)
(Myotubularin-related protein 4.)
genome : 56,587,958 - 56,591,985 (4,028)
query : 1 - 1,281 (1,281/1,281)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 7, cyto 6, extr_plas 6, mito_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202387)
HIX0202387
HIT000691841 (
ENST00000579921
)
(Myotubularin-related protein 4.)
genome : 56,588,809 - 56,595,200 (6,392)
query : 1 - 425 (425/425)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 20.1667, cyto 18.5, cyto_plas 11.8333,
nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202387)
HIX0202387
HIT000695124 (
ENST00000583243
)
(Myotubularin-related protein 4.)
genome : 56,588,812 - 56,591,397 (2,586)
query : 1 - 317 (317/317)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.48
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 9, cyto_plas 9, cyto_golg 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202387)
HIX0224414
HIT000692502 (
ENST00000580589
)
(Conserved hypothetical protein.)
genome : 56,597,198 - 56,634,286 (37,089)
query : 1 - 653 (653/653)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 6.5, cyto 5.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224414)
HIX0014033
HIT000063308
(
AF035811
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,597,616 - 56,606,634 (9,019)
query : 31 - 1,737 (1,707/1,768)
12 exons
identity = 0.998
3'(0.991;1.000;1.000;0.990;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.982
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000065931
(
AF073312
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,597,616 - 56,606,659 (9,044)
query : 1 - 1,732 (1,732/1,763)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000038243
(
BC018056
)
(Septin-4 isoform 3.)
genome : 56,597,617 - 56,609,388 (11,772)
query : 1 - 1,614 (1,614/1,630)
12 exons
identity = 0.998
3'(1.000;1.000;0.988;1.000;1.000;1.000;0.993;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 7, mito 6, extr 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000089552
(
BC018055
)
(Septin-4 isoform 2.)
genome : 56,597,623 - 56,609,362 (11,740)
query : 1 - 1,705 (1,705/1,720)
11 exons
identity = 0.998
3'(1.000;0.990;0.994;1.000;1.000;0.997;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, mito 12, cyto_nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000435462
(
BC142968
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,597,623 - 56,606,677 (9,055)
query : 1 - 2,276 (2,276/2,291)
10 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.987;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11.5, mito 10, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000656277 (
NM_001198713
)
(Septin-4 isoform 4.)
genome : 56,597,611 - 56,618,179 (20,569)
query : 1 - 1,706 (1,706/1,708)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 14.5, cyto_mito 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000211779 (
NM_080415
)
(Septin-4 isoform 2.)
genome : 56,597,611 - 56,609,443 (11,833)
query : 1 - 1,943 (1,943/1,945)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 14, nucl 9.5, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000211780 (
NM_080416
)
(Septin-4 isoform 3.)
genome : 56,597,611 - 56,609,443 (11,833)
query : 1 - 1,675 (1,675/1,677)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 7, mito 6, extr 3, E.R._mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000201318 (
NM_004574
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,597,611 - 56,606,778 (9,168)
query : 1 - 1,856 (1,856/1,858)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000659725 (
NR_037155
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,597,611 - 56,606,778 (9,168)
query : 1 - 2,379 (2,379/2,381)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 8.5, nucl 7, cyto 7, cyto_nucl 7, pero 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000723882 (
NM_001256822
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,597,611 - 56,605,408 (7,798)
query : 1 - 1,775 (1,775/1,777)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14, nucl 9, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000488718
(
AK294094
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,597,611 - 56,605,342 (7,732)
query : 1 - 1,709 (1,709/1,711)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14, nucl 9, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000723861 (
NM_001256782
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,597,611 - 56,618,179 (20,569)
query : 1 - 1,803 (1,803/1,803)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, nucl 9, cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000072654
(
AF176379
)
(Septin-4 isoform 2.)
genome : 56,597,616 - 56,609,411 (11,796)
query : 1 - 1,906 (1,906/1,911)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.978)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 14, nucl 9.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000694995 (
ENST00000583114
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,597,611 - 56,605,342 (7,732)
query : 1 - 1,709 (1,709/1,709)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14, nucl 9, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000524795 (
ENST00000426861
)
(Septin-4 isoform 2.)
genome : 56,597,616 - 56,609,411 (11,796)
query : 1 - 1,906 (1,906/1,906)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 14, nucl 9.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000476553 (
ENST00000393086
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,597,616 - 56,604,340 (6,725)
query : 3 - 1,551 (1,549/1,551)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 7, mito 6, extr 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000689394 (
ENST00000577440
)
(Septin-4 isoform 4.)
genome : 56,597,617 - 56,609,411 (11,795)
query : 1 - 1,792 (1,792/1,792)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 8, mito 7, cyto_plas 7, cyto_golg 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000222100
(
U88870
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,597,617 - 56,609,395 (11,779)
query : 1 - 1,617 (1,617/1,617)
12 exons
identity = 0.995
3'(0.996;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.919)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 7, mito 6, extr 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169769
Rattus
sp. (Rat) : AY208293
Mus
sp. (Mouse) : BC055101
Danio
sp. (Zebrafish) : BC078256
Bos
sp. (Cow) : BT029811
Pongo
sp. (Orangutan) : CR859973
Oryzias
sp. (Medaka) : ENSORLT00000003456
Tetraodon
sp. (Tetraodon) : GSTENT00010662001
Tetraodon
sp. (Tetraodon) : GSTENT00025377001
Takifugu
sp. (Fugu) : SINFRUT00000144245
Takifugu
sp. (Fugu) : SINFRUT00000144346
Danio
sp. (Zebrafish) : XM_001342978
Monodelphis
sp. (Opossum) : XM_001366364
Equus
sp. (Horse) : XM_001918270
Pan
sp. (Chimpanzee) : XM_511911
Canis
sp. (Dog) : XM_861979
HIX0014033
HIT000121224 (
ENST00000317268
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,597,617 - 56,606,712 (9,096)
query : 1 - 1,784 (1,784/1,784)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000695154 (
ENST00000583273
)
(Septin-4 isoform 6.)
genome : 56,597,617 - 56,606,711 (9,095)
query : 1 - 2,151 (2,151/2,151)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14, nucl 9, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000058160
(
AB008753
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,597,617 - 56,606,663 (9,047)
query : 1 - 1,735 (1,735/1,735)
12 exons
identity = 0.999
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000222094
(
U88829
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,597,617 - 56,606,660 (9,044)
query : 1 - 1,732 (1,732/1,732)
12 exons
identity = 0.999
3'(0.996;1.000;1.000;0.990;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000691300 (
ENST00000579371
)
(Septin-4 isoform 6.)
genome : 56,597,617 - 56,606,640 (9,024)
query : 1 - 1,362 (1,362/1,362)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000015932
(
AK091065
)
(Septin-4 isoform 6.)
genome : 56,597,617 - 56,606,564 (8,948)
query : 3 - 2,197 (2,195/2,197)
7 exons
identity = 0.999
3'(1.000;0.998;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14, extr 8, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000694164 (
ENST00000582270
)
(Septin-4 isoform 6.)
genome : 56,597,617 - 56,606,564 (8,948)
query : 1 - 2,195 (2,195/2,195)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14, extr 8, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000019434
(
AK094579
)
(Septin-4 isoform 6.)
genome : 56,597,617 - 56,605,391 (7,775)
query : 1 - 2,792 (2,792/2,792)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.997;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14, nucl 9, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000692706 (
ENST00000580796
)
(Septin-4 isoform 6.)
genome : 56,597,617 - 56,605,391 (7,775)
query : 1 - 2,790 (2,790/2,790)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14, nucl 9, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000057971
(
AB002110
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,597,618 - 56,606,631 (9,014)
query : 1 - 2,225 (2,225/2,225)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 8.5, nucl 7, cyto 7, cyto_nucl 7, pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000496538
(
AK301914
)
Representative transcript
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,597,619 - 56,618,179 (20,561)
query : 1 - 1,795 (1,795/1,795)
13 exons
identity = 0.999
3'(0.996;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, nucl 9, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000555281 (
ENST00000457347
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,597,619 - 56,618,179 (20,561)
query : 1 - 1,795 (1,795/1,795)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, nucl 9, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000692754 (
ENST00000580844
)
(Septin-4 isoform 6.)
genome : 56,597,660 - 56,606,664 (9,005)
query : 1 - 1,396 (1,396/1,396)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15.5, nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000496770
(
AK302146
)
(Septin-4 isoform 4.)
genome : 56,597,720 - 56,618,179 (20,460)
query : 1 - 1,597 (1,597/1,597)
12 exons
identity = 0.999
3'(1.000;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 14.5, cyto_mito 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000510879 (
ENST00000412945
)
(Septin-4 isoform 4.)
genome : 56,597,720 - 56,618,179 (20,460)
query : 1 - 1,597 (1,597/1,597)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 14.5, cyto_mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000121217 (
ENST00000317256
)
(Septin-4 isoform 3.)
genome : 56,597,720 - 56,609,407 (11,688)
query : 1 - 1,530 (1,530/1,530)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 7, mito 6, extr 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000434262
(
AK315396
)
(Septin-4 isoform 3.)
genome : 56,597,787 - 56,609,399 (11,613)
query : 1 - 1,455 (1,455/1,455)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.989;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 7, mito 6, extr 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000433911
(
AK315045
)
(Septin-4 isoform 6.)
genome : 56,597,787 - 56,606,674 (8,888)
query : 2 - 1,732 (1,731/1,732)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;0.990;1.000;1.000;0.992;
1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 15.5, nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000696356 (
ENST00000584488
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,597,787 - 56,606,674 (8,888)
query : 1 - 1,731 (1,731/1,731)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 15.5, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000102037
(
D89278
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,597,787 - 56,606,535 (8,749)
query : 1 - 1,437 (1,437/1,437)
12 exons
identity = 0.999
3'(1.000;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000267961
(
CR457111
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,597,787 - 56,606,535 (8,749)
query : 1 - 1,437 (1,437/1,437)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;0.990;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000427823
(
AK308957
)
(Septin-4 isoform 6.)
genome : 56,598,910 - 56,609,415 (10,506)
query : 1 - 952 (952/952)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13, extr 8, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000692719 (
ENST00000580809
)
(Septin-4 isoform 6.)
genome : 56,598,910 - 56,609,415 (10,506)
query : 1 - 952 (952/952)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13, extr 8, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000689679 (
ENST00000577729
)
(Septin-4 isoform 6.)
genome : 56,599,109 - 56,609,427 (10,319)
query : 1 - 724 (724/724)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12.5, extr 5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000693518 (
ENST00000581615
)
(Septin-4 isoform 6.)
genome : 56,599,382 - 56,606,674 (7,293)
query : 1 - 632 (632/632)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15, nucl 6.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000389781
(
BC128255
)
(Conserved hypothetical protein.)
genome : 56,599,398 - 56,606,661 (7,264)
query : 1 - 852 (852/852)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.997;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000389880
(
BC128515
)
(Conserved hypothetical protein.)
genome : 56,599,398 - 56,606,661 (7,264)
query : 1 - 853 (853/853)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000690077 (
ENST00000578131
)
(Septin-4 isoform 6.)
genome : 56,599,412 - 56,609,426 (10,015)
query : 1 - 508 (508/508)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14.5, nucl 6.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000046504
(
AK126631
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,601,949 - 56,605,930 (3,982)
query : 1 - 3,544 (3,544/3,544)
2 exons
identity = 0.996
3'(0.989;0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 16, extr 9, extr_plas 6.5, lyso 3, plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000697028 (
ENST00000585170
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,601,949 - 56,605,930 (3,982)
query : 1 - 3,544 (3,544/3,544)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 16, extr 9, extr_plas 6.5, lyso 3, plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000695172 (
ENST00000583291
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,602,439 - 56,609,436 (6,998)
query : 1 - 789 (789/789)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, mito 8, nucl 5, extr 4, E.R._mito 4,
mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000490151
(
AK295527
)
(Septin-4 isoform 4.)
genome : 56,602,523 - 56,609,398 (6,876)
query : 1 - 963 (963/963)
4 exons
identity = 0.999
3'(1.000;1.000;0.999;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 9, cyto 8, plas 7, pero 4, cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000696653 (
ENST00000584789
)
(Septin-4 isoform 4.)
genome : 56,602,523 - 56,609,398 (6,876)
query : 1 - 963 (963/963)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 9, cyto 8, plas 7, pero 4, cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0224414
HIT000689969 (
ENST00000578022
)
(Conserved hypothetical protein.)
genome : 56,602,901 - 56,634,338 (31,438)
query : 1 - 725 (725/725)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 3, cyto 2.5, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224414)
HIX0224414
HIT000692679 (
ENST00000580769
)
(Conserved hypothetical protein.)
genome : 56,603,030 - 56,621,668 (18,639)
query : 1 - 1,000 (1,000/1,000)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12, nucl 7.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224414)
HIX0014033
HIT000693821 (
ENST00000581921
)
(Septin-1.)
genome : 56,603,584 - 56,616,519 (12,936)
query : 1 - 235 (235/235)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.5.1
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000696396 (
ENST00000584528
)
(Septin-4 isoform 4.)
genome : 56,603,615 - 56,609,426 (5,812)
query : 1 - 559 (559/559)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 11.5, cyto 5.5, extr 5, mito 3,
extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000692701 (
ENST00000580791
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,603,676 - 56,605,359 (1,684)
query : 1 - 566 (566/566)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 10.5, cyto 10.5, extr 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000433394
(
AK314528
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,603,773 - 56,606,711 (2,939)
query : 1 - 803 (803/803)
2 exons
identity = 0.999
3'(0.998;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 8.5, nucl 7, cyto 7, cyto_nucl 7, pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000694142 (
ENST00000582248
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,603,924 - 56,605,374 (1,451)
query : 1 - 604 (604/604)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 8, mito 7, pero 5, nucl 4, cyto 4, cyto_nucl 4,
E.R._mito 4, cysk_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000692650 (
ENST00000580740
)
(Septin-4 isoform 2.)
genome : 56,603,938 - 56,609,647 (5,710)
query : 1 - 549 (549/549)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9, cyto 7, mito_nucl 7, plas 5.5, nucl 5,
mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000690685 (
ENST00000578747
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,603,939 - 56,609,003 (5,065)
query : 1 - 564 (564/564)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 10, cyto 6.5, cyto_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000693510 (
ENST00000581607
)
(Septin-4; Apoptosis-related protein in the TGF-beta signaling pathway; ARTS; Bradeion beta; Brain protein H5; CE5B3 beta; Cell division control-related protein 2; hCDCREL-2; Cerebral protein 7; Peanut-like protein 2;)
genome : 56,604,126 - 56,609,302 (5,177)
query : 1 - 676 (676/676)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 12, cyto 7, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014033
HIT000058212
(
AB010642
)
(Hypothetical short protein.)
genome : 56,606,654 - 56,606,952 (299)
query : 2 - 300 (299/300)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014033)
HIX0014034
HIT000005674
(
AK022400
)
Representative transcript
(Hypothetical protein.)
genome : 56,607,179 - 56,608,885 (1,707)
query : 1 - 1,707 (1,707/1,707)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 12, cyto_nucl 11, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014034)
HIX0014034
HIT000694859 (
ENST00000582976
)
(Hypothetical protein.)
genome : 56,607,179 - 56,608,885 (1,707)
query : 1 - 1,707 (1,707/1,707)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 12, cyto_nucl 11, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014034)
HIX0014035
HIT000366374 (
NM_001038704
)
(Uncharacterized protein C17orf47 homolog;)
genome : 56,618,948 - 56,621,733 (2,786)
query : 1 - 2,127 (2,127/2,127)
2 exons
identity = 0.999
3'(1.000;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 12.5, mito 6, cyto 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014035)
HIX0014035
HIT000122872 (
ENST00000321691
)
(Uncharacterized protein C17orf47 homolog;)
genome : 56,618,948 - 56,621,729 (2,782)
query : 1 - 2,123 (2,123/2,123)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 12.5, mito 6, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014035)
HIX0014035
HIT000022294
(
AK097440
)
Representative transcript
(Uncharacterized protein C17orf47 homolog;)
genome : 56,618,948 - 56,621,683 (2,736)
query : 1 - 2,077 (2,077/2,077)
2 exons
identity = 0.999
3'(1.000;0.998)5'
coverage = 1.000
InterPro :
IPR027979 : Protein of unknown function DUF4655
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 12.5, mito 6, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014035)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AY208293
Mus
sp. (Mouse) : BC055101
Bos
sp. (Cow) : BT029811
Canis
sp. (Dog) : ENSCAFT00000027792
Monodelphis
sp. (Opossum) : ENSMODT00000018647
Pongo
sp. (Orangutan) : ENSPPYT00000009620
Macaca
sp. (Macaque) : XM_001106885
Equus
sp. (Horse) : XM_001917807
Pan
sp. (Chimpanzee) : XM_511911
HIX0014035
HIT000039409
(
BC022189
)
(Uncharacterized protein C17orf47 homolog;)
genome : 56,619,156 - 56,621,729 (2,574)
query : 1 - 1,915 (1,915/1,930)
2 exons
identity = 0.999
3'(1.000;0.999)5'
coverage = 1.000
InterPro :
IPR027979 : Protein of unknown function DUF4655
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 12.5, mito 6, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014035)
HIX0014036
HIT000028874
(
AL834143
)
Representative transcript
(Inactive serine/threonine-protein kinase TEX14; Protein kinase-like protein SgK307; Sugen kinase 307; Testis-expressed sequence 14; Testis-expressed sequence 14 protein;)
genome : 56,634,039 - 56,769,416 (135,378)
query : 1 - 4,926 (4,926/4,958)
33 exons
identity = 0.998
3'(1.000;1.000;0.991;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.961;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.993;1.000)5'
coverage = 1.000
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0004672 : Molecular Function : protein kinase activity
0005515 : Molecular Function : protein binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 11, nucl 6, mito 6, mito_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014036)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF285584
Bos
sp. (Cow) : BC108182
Canis
sp. (Dog) : ENSCAFT00000027830
Equus
sp. (Horse) : ENSECAT00000025388
Gallus
sp. (Chicken) : ENSGALT00000008076
Pongo
sp. (Orangutan) : ENSPPYT00000009619
Monodelphis
sp. (Opossum) : XM_001365954
Rattus
sp. (Rat) : XM_220825
Pan
sp. (Chimpanzee) : XM_511912
Macaca
sp. (Macaque) : XR_013053
HIX0014036
HIT000098093
(
BC045647
)
(Inactive serine/threonine-protein kinase TEX14 isoform b.)
genome : 56,634,041 - 56,769,406 (135,366)
query : 1 - 4,834 (4,834/4,849)
32 exons
identity = 0.998
3'(1.000;1.000;0.991;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.999;1.000;0.956;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.991)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014036)
HIX0014036
HIT000052416
(
BC040526
)
(Inactive serine/threonine-protein kinase TEX14; Protein kinase-like protein SgK307; Sugen kinase 307; Testis-expressed sequence 14; Testis-expressed sequence 14 protein;)
genome : 56,634,041 - 56,769,384 (135,344)
query : 1 - 4,911 (4,911/4,926)
33 exons
identity = 0.998
3'(1.000;1.000;0.991;1.000;0.990;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.961;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.988)5'
coverage = 1.000
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0004672 : Molecular Function : protein kinase activity
0005515 : Molecular Function : protein binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 11, nucl 6, mito 6, mito_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014036)
HIX0014036
HIT000210098 (
NM_031272
)
(Inactive serine/threonine-protein kinase TEX14 isoform b.)
genome : 56,634,038 - 56,769,416 (135,379)
query : 1 - 4,808 (4,808/4,816)
32 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.961;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 10, mito 7, nucl 6, extr 3, cyto_nucl 3, golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014036)
HIX0014036
HIT000319302 (
NM_198393
)
(Inactive serine/threonine-protein kinase TEX14; Protein kinase-like protein SgK307; Sugen kinase 307; Testis-expressed sequence 14; Testis-expressed sequence 14 protein;)
genome : 56,634,038 - 56,769,416 (135,379)
query : 1 - 4,928 (4,928/4,936)
33 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.961;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 11, nucl 6, mito 6, mito_nucl 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014036)
HIX0014036
HIT000656792 (
NM_001201457
)
(Inactive serine/threonine-protein kinase TEX14; Protein kinase-like protein SgK307; Sugen kinase 307; Testis-expressed sequence 14; Testis-expressed sequence 14 protein;)
genome : 56,634,038 - 56,769,416 (135,379)
query : 1 - 4,946 (4,946/4,954)
33 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.961;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 11, nucl 6, mito 6, mito_nucl 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014036)
HIX0014036
HIT000076287
(
AF285601
)
(Inactive serine/threonine-protein kinase TEX14; Protein kinase-like protein SgK307; Sugen kinase 307; Testis-expressed sequence 14; Testis-expressed sequence 14 protein;)
genome : 56,634,039 - 56,679,869 (45,831)
query : 1 - 3,271 (3,271/3,280)
21 exons
identity = 0.997
3'(1.000;1.000;0.991;1.000;1.000;1.000;0.971;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.934)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 18.5, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014036)
HIX0014036
HIT000396822 (
ENST00000389934
)
(Inactive serine/threonine-protein kinase TEX14; Protein kinase-like protein SgK307; Sugen kinase 307; Testis-expressed sequence 14; Testis-expressed sequence 14 protein;)
genome : 56,634,039 - 56,769,416 (135,378)
query : 1 - 4,927 (4,927/4,927)
33 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.961;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 11, nucl 6, mito 6, mito_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014036)
HIX0014036
HIT000694630 (
ENST00000582740
)
(Inactive serine/threonine-protein kinase TEX14; Protein kinase-like protein SgK307; Sugen kinase 307; Testis-expressed sequence 14; Testis-expressed sequence 14 protein;)
genome : 56,634,041 - 56,769,406 (135,366)
query : 1 - 4,834 (4,834/4,834)
32 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.961;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014036)
HIX0014036
HIT000105048 (
ENST00000240361
)
(Inactive serine/threonine-protein kinase TEX14; Protein kinase-like protein SgK307; Sugen kinase 307; Testis-expressed sequence 14; Testis-expressed sequence 14 protein;)
genome : 56,634,041 - 56,769,384 (135,344)
query : 1 - 4,911 (4,911/4,911)
33 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.961;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 11, nucl 6, mito 6, mito_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014036)
HIX0014036
HIT000307724 (
ENST00000349033
)
(Inactive serine/threonine-protein kinase TEX14 isoform b.)
genome : 56,634,041 - 56,769,384 (135,344)
query : 1 - 4,773 (4,773/4,773)
32 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.961;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 10, mito 7, nucl 6, extr 3, cyto_nucl 3, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014036)
HIX0014036
HIT000696565 (
ENST00000584699
)
(Inactive serine/threonine-protein kinase TEX14; Protein kinase-like protein SgK307; Sugen kinase 307; Testis-expressed sequence 14; Testis-expressed sequence 14 protein;)
genome : 56,634,041 - 56,641,619 (7,579)
query : 1 - 673 (673/673)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014036)
HIX0014036
HIT000045769
(
AK125896
)
(Inactive serine/threonine-protein kinase TEX14; Protein kinase-like protein SgK307; Sugen kinase 307; Testis-expressed sequence 14; Testis-expressed sequence 14 protein;)
genome : 56,638,880 - 56,769,406 (130,527)
query : 1 - 3,362 (3,362/3,380)
25 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000;1.000;1.000)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13.6667, cyto 10.5,
cyto_golg 8.83333, golg 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014036)
HIX0014036
HIT000048090
(
AK128217
)
(Inactive serine/threonine-protein kinase TEX14; Protein kinase-like protein SgK307; Sugen kinase 307; Testis-expressed sequence 14; Testis-expressed sequence 14 protein;)
genome : 56,642,295 - 56,699,117 (56,823)
query : 1 - 3,552 (3,552/3,552)
24 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999;1.000;0.961;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 14.5, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014036)
HIX0014036
HIT000693055 (
ENST00000581147
)
(Inactive serine/threonine-protein kinase TEX14; Protein kinase-like protein SgK307; Sugen kinase 307; Testis-expressed sequence 14; Testis-expressed sequence 14 protein;)
genome : 56,643,113 - 56,650,612 (7,500)
query : 1 - 676 (676/676)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 7.5, cyto_nucl 7, cyto 5.5,
extr_plas 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014036)
HIX0014036
HIT000427165
(
AK308299
)
(Inactive serine/threonine-protein kinase TEX14 isoform b.)
genome : 56,663,203 - 56,769,376 (106,174)
query : 1 - 3,106 (3,106/3,106)
18 exons
identity = 0.996
3'(1.000;1.000;1.000;0.991;0.997;1.000;0.961;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0004672 : Molecular Function : protein kinase activity
0005515 : Molecular Function : protein binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, E.R._mito 8.83333, mito_pero 7.33333,
extr 4.5, E.R. 4.5, extr_plas 4.5, plas 3.5, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014036)
HIX0224967
HIT000695546 (
ENST00000583666
)
(TAP42-like protein family protein.)
genome : 56,737,941 - 56,738,960 (1,020)
query : 1 - 1,020 (1,020/1,020)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224967)
HIX0224786
HIT000690123 (
ENST00000578177
)
(Ribosomal protein L44e family protein.)
genome : 56,752,649 - 56,752,829 (181)
query : 1 - 181 (181/181)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224786)
HIX0014037
HIT000338883
(
BC107753
)
Representative transcript
(DNA repair protein RAD51 homolog 3; R51H3; RAD51 homolog C; RAD51-like protein 2;)
genome : 56,769,934 - 56,811,687 (41,754)
query : 5 - 1,310 (1,306/1,340)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995)3'
coverage = 0.997
InterPro :
IPR003593 : AAA+ ATPase domain
IPR013632 : DNA recombination and repair protein Rad51, C-terminal
IPR020588 : DNA recombination and repair protein RecA-like, ATP-binding domain
GO :
0000166 : Molecular Function : nucleotide binding
0003677 : Molecular Function : DNA binding
0005524 : Molecular Function : ATP binding
0006259 : Biological Process : DNA metabolic process
0008094 : Molecular Function : DNA-dependent ATPase activity
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 10.5, cyto_nucl 7, E.R._mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB060904
Mus
sp. (Mouse) : AK136204
Danio
sp. (Zebrafish) : BC083214
Canis
sp. (Dog) : ENSCAFT00000027833
Gallus
sp. (Chicken) : ENSGALT00000039328
Monodelphis
sp. (Opossum) : ENSMODT00000018627
Pongo
sp. (Orangutan) : ENSPPYT00000009618
Takifugu
sp. (Fugu) : SINFRUT00000181420
Rattus
sp. (Rat) : XM_001081158
Equus
sp. (Horse) : XM_001500643
Pan
sp. (Chimpanzee) : XM_511913
Bos
sp. (Cow) : XM_613584
HIX0014037
HIT000130499 (
ENST00000337432
)
(DNA repair protein RAD51 homolog 3; R51H3; RAD51 homolog C; RAD51-like protein 2;)
genome : 56,769,934 - 56,811,703 (41,770)
query : 1 - 1,322 (1,322/1,322)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 10.5, cyto_nucl 7, E.R._mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000695420 (
ENST00000583539
)
(DNA repair protein RAD51 homolog 3; R51H3; RAD51 homolog C; RAD51-like protein 2;)
genome : 56,769,934 - 56,810,127 (40,194)
query : 1 - 1,319 (1,319/1,319)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 13.5, cyto_nucl 8, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000566166 (
ENST00000461271
)
(DNA repair protein RAD51 homolog 3; R51H3; RAD51 homolog C; RAD51-like protein 2;)
genome : 56,769,934 - 56,787,272 (17,339)
query : 1 - 726 (726/726)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 13.5, cyto_nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000591600 (
ENST00000487921
)
(DNA repair protein RAD51 homolog 3; R51H3; RAD51 homolog C; RAD51-like protein 2;)
genome : 56,769,937 - 56,783,274 (13,338)
query : 1 - 653 (653/653)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 11.5, cyto_nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000062982
(
AF029669
)
(DNA repair protein RAD51 homolog 3; R51H3; RAD51 homolog C; RAD51-like protein 2;)
genome : 56,769,963 - 56,811,691 (41,729)
query : 1 - 1,281 (1,281/1,295)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003593 : AAA+ ATPase domain
IPR013632 : DNA recombination and repair protein Rad51, C-terminal
IPR020588 : DNA recombination and repair protein RecA-like, ATP-binding domain
GO :
0000166 : Molecular Function : nucleotide binding
0003677 : Molecular Function : DNA binding
0005524 : Molecular Function : ATP binding
0006259 : Biological Process : DNA metabolic process
0008094 : Molecular Function : DNA-dependent ATPase activity
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 10.5, cyto_nucl 7, E.R._mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000211726 (
NM_058216
)
(DNA repair protein RAD51 homolog 3; R51H3; RAD51 homolog C; RAD51-like protein 2;)
genome : 56,769,963 - 56,811,691 (41,729)
query : 1 - 1,281 (1,281/1,295)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 10.5, cyto_nucl 7, E.R._mito 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000264956
(
BC073161
)
(DNA repair protein RAD51 homolog 3; R51H3; RAD51 homolog C; RAD51-like protein 2;)
genome : 56,769,963 - 56,811,691 (41,729)
query : 1 - 2,076 (2,076/2,090)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR013632 : DNA recombination and repair protein Rad51, C-terminal
IPR020588 : DNA recombination and repair protein RecA-like, ATP-binding domain
GO :
0003677 : Molecular Function : DNA binding
0005524 : Molecular Function : ATP binding
0006259 : Biological Process : DNA metabolic process
0008094 : Molecular Function : DNA-dependent ATPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 13.5, cyto_nucl 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000579988 (
ENST00000475762
)
(DNA repair protein RAD51 homolog 3; R51H3; RAD51 homolog C; RAD51-like protein 2;)
genome : 56,769,963 - 56,811,692 (41,730)
query : 1 - 2,077 (2,077/2,077)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 13.5, cyto_nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000423284
(
AK290487
)
(DNA repair protein RAD51 homolog 3; R51H3; RAD51 homolog C; RAD51-like protein 2;)
genome : 56,769,963 - 56,787,275 (17,313)
query : 1 - 636 (636/636)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR010995 : DNA repair Rad51/transcription factor NusA, alpha-helical
IPR020588 : DNA recombination and repair protein RecA-like, ATP-binding domain
GO :
0000166 : Molecular Function : nucleotide binding
0003677 : Molecular Function : DNA binding
0005524 : Molecular Function : ATP binding
0006259 : Biological Process : DNA metabolic process
0008094 : Molecular Function : DNA-dependent ATPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 7, extr 2, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000199751 (
NM_002876
)
(DNA repair protein RAD51 homolog 3 isoform 2.)
genome : 56,769,963 - 56,772,695 (2,733)
query : 1 - 591 (591/607)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 7, extr 2, nucl 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000580919 (
ENST00000476741
)
(DNA repair protein RAD51 homolog 3; R51H3; RAD51 homolog C; RAD51-like protein 2;)
genome : 56,769,963 - 56,771,082 (1,120)
query : 1 - 558 (558/558)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000591224 (
ENST00000487525
)
(DNA repair protein RAD51 homolog 3 isoform 2.)
genome : 56,769,967 - 56,811,686 (41,720)
query : 1 - 1,253 (1,253/1,253)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 7, extr 2, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000261497
(
BC064578
)
(DNA repair protein RAD51 homolog 3 isoform 2.)
genome : 56,769,967 - 56,772,694 (2,728)
query : 1 - 1,609 (1,609/1,667)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, extr 5, cyto 4.5, cyto_nucl 4.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000590560 (
ENST00000486827
)
(DNA repair protein RAD51 homolog 3 isoform 2.)
genome : 56,769,967 - 56,772,694 (2,728)
query : 1 - 1,609 (1,609/1,609)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, extr 5, cyto 4.5, cyto_nucl 4.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000336854
(
BC101485
)
(DNA repair protein RAD51 homolog 3 isoform 2.)
genome : 56,769,968 - 56,780,582 (10,615)
query : 1 - 467 (467/467)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR010995 : DNA repair Rad51/transcription factor NusA, alpha-helical
IPR020588 : DNA recombination and repair protein RecA-like, ATP-binding domain
GO :
0000166 : Molecular Function : nucleotide binding
0003677 : Molecular Function : DNA binding
0005524 : Molecular Function : ATP binding
0006259 : Biological Process : DNA metabolic process
0008094 : Molecular Function : DNA-dependent ATPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 7, extr 2, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000334905
(
BC093930
)
(DNA repair protein RAD51 homolog 3 isoform 2.)
genome : 56,769,968 - 56,780,581 (10,614)
query : 1 - 466 (466/466)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR010995 : DNA repair Rad51/transcription factor NusA, alpha-helical
IPR020588 : DNA recombination and repair protein RecA-like, ATP-binding domain
GO :
0000166 : Molecular Function : nucleotide binding
0003677 : Molecular Function : DNA binding
0005524 : Molecular Function : ATP binding
0006259 : Biological Process : DNA metabolic process
0008094 : Molecular Function : DNA-dependent ATPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 7, extr 2, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000501719
(
BC143259
)
(DNA repair protein RAD51 homolog 3; R51H3; RAD51 homolog C; RAD51-like protein 2;)
genome : 56,769,968 - 56,780,581 (10,614)
query : 1 - 530 (530/530)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013632 : DNA recombination and repair protein Rad51, C-terminal
IPR020588 : DNA recombination and repair protein RecA-like, ATP-binding domain
GO :
0003677 : Molecular Function : DNA binding
0005524 : Molecular Function : ATP binding
0006259 : Biological Process : DNA metabolic process
0008094 : Molecular Function : DNA-dependent ATPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 12.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000029820
(
BC000667
)
(DNA repair protein RAD51 homolog 3 isoform 2.)
genome : 56,769,976 - 56,811,687 (41,712)
query : 1 - 1,097 (1,097/1,114)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR010995 : DNA repair Rad51/transcription factor NusA, alpha-helical
IPR020588 : DNA recombination and repair protein RecA-like, ATP-binding domain
GO :
0000166 : Molecular Function : nucleotide binding
0003677 : Molecular Function : DNA binding
0005524 : Molecular Function : ATP binding
0006259 : Biological Process : DNA metabolic process
0008094 : Molecular Function : DNA-dependent ATPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 7, extr 2, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000585958 (
ENST00000482007
)
(DNA repair protein RAD51 homolog 3 isoform 2.)
genome : 56,769,976 - 56,811,688 (41,713)
query : 1 - 1,098 (1,098/1,098)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 7, extr 2, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000062983
(
AF029670
)
(DNA repair protein RAD51 homolog 3 isoform 2.)
genome : 56,769,989 - 56,772,695 (2,707)
query : 1 - 565 (565/581)
2 exons
identity = 0.998
5'(1.000;0.998)3'
coverage = 0.998
InterPro :
IPR010995 : DNA repair Rad51/transcription factor NusA, alpha-helical
IPR020588 : DNA recombination and repair protein RecA-like, ATP-binding domain
GO :
0000166 : Molecular Function : nucleotide binding
0003677 : Molecular Function : DNA binding
0005524 : Molecular Function : ATP binding
0006259 : Biological Process : DNA metabolic process
0008094 : Molecular Function : DNA-dependent ATPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 7, extr 2, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000519716 (
ENST00000421782
)
(DNA repair protein RAD51 homolog 3 isoform 2.)
genome : 56,769,989 - 56,772,695 (2,707)
query : 1 - 565 (565/565)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 7, extr 2, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000100259
(
BT007339
)
(DNA repair protein RAD51 homolog 3; R51H3; RAD51 homolog C; RAD51-like protein 2;)
genome : 56,770,005 - 56,772,549 (2,545)
query : 1 - 403 (403/405)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.995
InterPro :
IPR010995 : DNA repair Rad51/transcription factor NusA, alpha-helical
IPR020588 : DNA recombination and repair protein RecA-like, ATP-binding domain
GO :
0000166 : Molecular Function : nucleotide binding
0003677 : Molecular Function : DNA binding
0005524 : Molecular Function : ATP binding
0006259 : Biological Process : DNA metabolic process
0008094 : Molecular Function : DNA-dependent ATPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 7, extr 2, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000497987
(
AK303363
)
(DNA repair protein RAD51 homolog 3; R51H3; RAD51 homolog C; RAD51-like protein 2;)
genome : 56,770,024 - 56,810,127 (40,104)
query : 1 - 1,229 (1,229/1,229)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR003593 : AAA+ ATPase domain
IPR013632 : DNA recombination and repair protein Rad51, C-terminal
IPR020588 : DNA recombination and repair protein RecA-like, ATP-binding domain
GO :
0000166 : Molecular Function : nucleotide binding
0003677 : Molecular Function : DNA binding
0005524 : Molecular Function : ATP binding
0006259 : Biological Process : DNA metabolic process
0008094 : Molecular Function : DNA-dependent ATPase activity
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 13.5, cyto_nucl 8, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000696484 (
ENST00000584617
)
(DNA repair protein RAD51 homolog 3; R51H3; RAD51 homolog C; RAD51-like protein 2;)
genome : 56,770,024 - 56,809,880 (39,857)
query : 1 - 723 (723/723)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 9, extr_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000049009
(
AK129738
)
(DNA repair protein RAD51 homolog 3; R51H3; RAD51 homolog C; RAD51-like protein 2;)
genome : 56,770,024 - 56,772,241 (2,218)
query : 1 - 1,657 (1,657/1,657)
2 exons
identity = 0.998
5'(1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 8, extr_plas 8, cyto_nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000523107 (
ENST00000425173
)
(DNA repair protein RAD51 homolog 3 isoform 2.)
genome : 56,772,351 - 56,783,971 (11,621)
query : 1 - 623 (623/639)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.975
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 12, cyto_nucl 10.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000511524 (
ENST00000413590
)
(DNA repair protein RAD51 homolog 3; R51H3; RAD51 homolog C; RAD51-like protein 2;)
genome : 56,772,509 - 56,811,590 (39,082)
query : 1 - 779 (779/779)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 11.5, extr 10, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000693128 (
ENST00000581221
)
(DNA repair protein RAD51 homolog 3; R51H3; RAD51 homolog C; RAD51-like protein 2;)
genome : 56,787,000 - 56,811,688 (24,689)
query : 1 - 751 (751/751)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, extr 12, cyto 11.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000690097 (
ENST00000578151
)
(DNA repair protein RAD51 homolog 3; R51H3; RAD51 homolog C; RAD51-like protein 2;)
genome : 56,787,180 - 56,811,703 (24,524)
query : 1 - 464 (464/464)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, extr 10, cyto 9, nucl 7, mito 3, pero 3,
mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000696668 (
ENST00000584804
)
(DNA repair protein RAD51 homolog 3; R51H3; RAD51 homolog C; RAD51-like protein 2;)
genome : 56,787,220 - 56,811,692 (24,473)
query : 1 - 474 (474/474)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 12, cyto_nucl 10, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014037
HIT000566579 (
ENST00000461706
)
(Conserved hypothetical protein.)
genome : 56,809,693 - 56,811,692 (2,000)
query : 1 - 427 (427/427)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014037)
HIX0014038
HIT000205187 (
NM_014906
)
(Protein phosphatase 1E; EC=3.1.3.16; Ca(2+)/calmodulin-dependent protein kinase phosphatase N; CaMKP-N; CaMKP-nucleus; CaMKN; Partner of PIX 1; Partner of PIX-alpha; Partner of PIXA;)
genome : 56,833,230 - 57,062,540 (229,311)
query : 1 - 6,545 (6,545/6,545)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 16.5, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014038)
HIX0014038
HIT000727118 (
NR_048561
)
(Protein phosphatase 1F; EC=3.1.3.16; Ca(2+)/calmodulin-dependent protein kinase phosphatase; CaM-kinase phosphatase; CaMKPase; Partner of PIX 2;)
genome : 56,833,230 - 57,062,540 (229,311)
query : 1 - 6,345 (6,345/6,345)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 9.83333, mito_nucl 9.83333,
cyto 9.5, nucl 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014038)
HIX0014038
HIT000117909 (
ENST00000308249
)
(Protein phosphatase 1E; EC=3.1.3.16; Ca(2+)/calmodulin-dependent protein kinase phosphatase N; CaMKP-N; CaMKP-nucleus; CaMKN; Partner of PIX 1; Partner of PIX-alpha; Partner of PIXA;)
genome : 56,833,230 - 57,058,983 (225,754)
query : 1 - 2,988 (2,988/2,988)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 16.5, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014038)
HIX0014038
HIT000422763
(
AK289966
)
(Protein phosphatase 1E; EC=3.1.3.16; Ca(2+)/calmodulin-dependent protein kinase phosphatase N; CaMKP-N; CaMKP-nucleus; CaMKN; Partner of PIX 1; Partner of PIX-alpha; Partner of PIXA;)
genome : 56,833,230 - 57,058,983 (225,754)
query : 1 - 2,994 (2,994/2,994)
7 exons
identity = 0.997
5'(0.990;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000222 : Protein phosphatase 2C, manganese/magnesium aspartate binding site
IPR001932 : Protein phosphatase 2C (PP2C)-like domain
IPR015655 : Protein phosphatase 2C
GO :
0003824 : Molecular Function : catalytic activity
0004722 : Molecular Function : protein serine/threonine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 16.5, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014038)
HIX0014038
HIT000075271
(
AF260269
)
(Protein phosphatase 1E; EC=3.1.3.16; Ca(2+)/calmodulin-dependent protein kinase phosphatase N; CaMKP-N; CaMKP-nucleus; CaMKN; Partner of PIX 1; Partner of PIX-alpha; Partner of PIXA;)
genome : 56,833,232 - 57,062,537 (229,306)
query : 1 - 6,572 (6,572/6,572)
7 exons
identity = 0.995
5'(0.947;1.000;1.000;1.000;1.000;0.989;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000222 : Protein phosphatase 2C, manganese/magnesium aspartate binding site
IPR001932 : Protein phosphatase 2C (PP2C)-like domain
IPR015655 : Protein phosphatase 2C
GO :
0003824 : Molecular Function : catalytic activity
0004722 : Molecular Function : protein serine/threonine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 16.5, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014038)
HIX0014038
HIT000435936
(
BC151228
)
(Protein phosphatase 1E; EC=3.1.3.16; Ca(2+)/calmodulin-dependent protein kinase phosphatase N; CaMKP-N; CaMKP-nucleus; CaMKN; Partner of PIX 1; Partner of PIX-alpha; Partner of PIXA;)
genome : 56,833,232 - 57,061,027 (227,796)
query : 1 - 5,036 (5,036/5,070)
7 exons
identity = 0.998
5'(0.990;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000222 : Protein phosphatase 2C, manganese/magnesium aspartate binding site
IPR001932 : Protein phosphatase 2C (PP2C)-like domain
IPR015655 : Protein phosphatase 2C
GO :
0003824 : Molecular Function : catalytic activity
0004722 : Molecular Function : protein serine/threonine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 16.5, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014038)
HIX0014038
HIT000000789
(
AB028995
)
(Protein phosphatase 1E; EC=3.1.3.16; Ca(2+)/calmodulin-dependent protein kinase phosphatase N; CaMKP-N; CaMKP-nucleus; CaMKN; Partner of PIX 1; Partner of PIX-alpha; Partner of PIXA;)
genome : 56,833,232 - 57,061,026 (227,795)
query : 1 - 5,035 (5,035/5,035)
7 exons
identity = 0.998
5'(0.990;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 16.5, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014038)
HIX0014038
HIT000500321
(
BC136290
)
(Protein phosphatase 1E; EC=3.1.3.16; Ca(2+)/calmodulin-dependent protein kinase phosphatase N; CaMKP-N; CaMKP-nucleus; CaMKN; Partner of PIX 1; Partner of PIX-alpha; Partner of PIXA;)
genome : 56,833,290 - 57,059,475 (226,186)
query : 1 - 3,425 (3,425/3,425)
7 exons
identity = 0.998
5'(0.989;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000222 : Protein phosphatase 2C, manganese/magnesium aspartate binding site
IPR001932 : Protein phosphatase 2C (PP2C)-like domain
IPR015655 : Protein phosphatase 2C
GO :
0003824 : Molecular Function : catalytic activity
0004722 : Molecular Function : protein serine/threonine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 16.5, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014038)
HIX0014038
HIT000502286
(
BC143845
)
(Protein phosphatase 1F; EC=3.1.3.16; Ca(2+)/calmodulin-dependent protein kinase phosphatase; CaM-kinase phosphatase; CaMKPase; Partner of PIX 2;)
genome : 56,833,290 - 57,059,475 (226,186)
query : 1 - 3,225 (3,225/3,225)
6 exons
identity = 0.997
5'(0.989;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000222 : Protein phosphatase 2C, manganese/magnesium aspartate binding site
IPR001932 : Protein phosphatase 2C (PP2C)-like domain
IPR015655 : Protein phosphatase 2C
GO :
0003824 : Molecular Function : catalytic activity
0004722 : Molecular Function : protein serine/threonine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 9.83333, mito_nucl 9.83333,
cyto 9.5, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014038)
HIX0014038
HIT000081151
(
AF520614
)
(Protein phosphatase 1E; EC=3.1.3.16; Ca(2+)/calmodulin-dependent protein kinase phosphatase N; CaMKP-N; CaMKP-nucleus; CaMKN; Partner of PIX 1; Partner of PIX-alpha; Partner of PIXA;)
genome : 56,833,359 - 57,058,392 (225,034)
query : 1 - 2,274 (2,274/2,274)
7 exons
identity = 0.997
5'(0.987;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000222 : Protein phosphatase 2C, manganese/magnesium aspartate binding site
IPR001932 : Protein phosphatase 2C (PP2C)-like domain
IPR015655 : Protein phosphatase 2C
GO :
0003824 : Molecular Function : catalytic activity
0004722 : Molecular Function : protein serine/threonine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 16.5, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014038)
HIX0014038
HIT000306293
(
CR749253
)
Representative transcript
(Protein phosphatase 1F; EC=3.1.3.16; Ca(2+)/calmodulin-dependent protein kinase phosphatase; CaM-kinase phosphatase; CaMKPase; Partner of PIX 2;)
genome : 56,833,790 - 57,067,852 (234,063)
query : 1 - 4,557 (4,557/4,597)
7 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;0.999;0.985)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000222 : Protein phosphatase 2C, manganese/magnesium aspartate binding site
IPR001932 : Protein phosphatase 2C (PP2C)-like domain
IPR015655 : Protein phosphatase 2C
GO :
0003824 : Molecular Function : catalytic activity
0004722 : Molecular Function : protein serine/threonine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24.5, mito_pero 13, nucl 5.5, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014038)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB081729
Danio
sp. (Zebrafish) : AB113302
Mus
sp. (Mouse) : AK122434
Macaca
sp. (Macaque) : ENSMMUT00000041752
Oryzias
sp. (Medaka) : ENSORLT00000017859
Pongo
sp. (Orangutan) : ENSPPYT00000010292
Monodelphis
sp. (Opossum) : XM_001365329
Equus
sp. (Horse) : XM_001918275
Gallus
sp. (Chicken) : XM_415871
Pan
sp. (Chimpanzee) : XM_523813
Bos
sp. (Cow) : XM_610559
Canis
sp. (Dog) : XM_848160
HIX0212470
HIT000576346 (
ENST00000471945
)
(Conserved hypothetical protein.)
genome : 56,975,137 - 56,977,053 (1,917)
query : 1 - 383 (383/383)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 6, cyto 5.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212470)
HIX0224261
HIT000097051
(
BC042014
)
Representative transcript
(Conserved hypothetical protein.)
genome : 57,043,313 - 57,044,083 (771)
query : 1 - 771 (771/786)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 4, mito 4, cyto_mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224261)
HIX0224261
HIT000693978 (
ENST00000582080
)
(Conserved hypothetical protein.)
genome : 57,043,313 - 57,044,088 (776)
query : 1 - 776 (776/776)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 4, mito 4, cyto_mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224261)
HIX0224096
HIT000697145 (
ENST00000585287
)
(Conserved hypothetical protein.)
genome : 57,059,999 - 57,089,812 (29,814)
query : 4 - 634 (631/634)
4 exons
identity = 0.998
3'(1.000;1.000;1.000;0.992)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 13.5, cyto 9, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224096)
HIX0224096
HIT000695822 (
ENST00000583945
)
(Conserved hypothetical protein.)
genome : 57,060,012 - 57,089,768 (29,757)
query : 1 - 430 (430/430)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15, cyto 9.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224096)
HIX0224096
HIT000005975
(
AK022701
)
Representative transcript
(Conserved hypothetical protein.)
genome : 57,075,569 - 57,109,374 (33,806)
query : 1 - 2,234 (2,234/2,234)
7 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 14.5, cyto 8, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224096)
HIX0014018
HIT000489684
(
AK295060
)
(RNA-binding protein Musashi homolog 2 isoform b.)
genome : 55,333,212 - 55,757,482 (424,271)
query : 2 - 1,715 (1,714/1,715)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 0.999
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014018)
HIX0014018
HIT000514360 (
ENST00000416426
)
(RNA-binding protein Musashi homolog 2 isoform b.)
genome : 55,333,212 - 55,757,482 (424,271)
query : 1 - 1,714 (1,714/1,714)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014018)
HIX0014018
HIT000112440 (
ENST00000284073
)
(RNA-binding protein Musashi homolog 2; Musashi-2;)
genome : 55,333,895 - 55,762,046 (428,152)
query : 1 - 6,364 (6,364/6,364)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014018)
HIX0014018
HIT000212601 (
NM_138962
)
(RNA-binding protein Musashi homolog 2; Musashi-2;)
genome : 55,333,931 - 55,757,299 (423,369)
query : 1 - 1,581 (1,581/1,581)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014018)
HIX0014018
HIT000030475
(
BC001526
)
Representative transcript
(RNA-binding protein Musashi homolog 2; Musashi-2;)
genome : 55,333,931 - 55,757,115 (423,185)
query : 1 - 1,397 (1,397/1,414)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014018)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK049637
Danio
sp. (Zebrafish) : BC055251
Gallus
sp. (Chicken) : CR391353
Bos
sp. (Cow) : ENSBTAT00000005780
Equus
sp. (Horse) : ENSECAT00000011808
Macaca
sp. (Macaque) : ENSMMUT00000002926
Oryzias
sp. (Medaka) : ENSORLT00000012130
Pongo
sp. (Orangutan) : ENSPPYT00000009636
Takifugu
sp. (Fugu) : SINFRUT00000176833
Rattus
sp. (Rat) : XM_001081205
Pan
sp. (Chimpanzee) : XM_001162046
Monodelphis
sp. (Opossum) : XM_001367919
Canis
sp. (Dog) : XM_861557
HIX0014018
HIT000694344 (
ENST00000582453
)
(RNA-binding protein Musashi homolog 2; Musashi-2;)
genome : 55,334,135 - 55,643,356 (309,222)
query : 1 - 496 (496/496)
8 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014018)
HIX0014018
HIT000214547 (
NM_170721
)
(RNA-binding protein Musashi homolog 2 isoform b.)
genome : 55,334,374 - 55,710,544 (376,171)
query : 1 - 2,143 (2,143/2,151)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 17.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014018)
HIX0014018
HIT000018751
(
AK093888
)
(RNA-binding protein Musashi homolog 2 isoform b.)
genome : 55,334,374 - 55,710,261 (375,888)
query : 1 - 1,860 (1,860/1,860)
10 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014018)
HIX0014018
HIT000123239 (
ENST00000322684
)
(RNA-binding protein Musashi homolog 2 isoform b.)
genome : 55,334,374 - 55,710,261 (375,888)
query : 1 - 1,860 (1,860/1,860)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014018)
HIX0014018
HIT000691516 (
ENST00000579590
)
(RNA-binding protein Musashi homolog 2; Musashi-2;)
genome : 55,334,379 - 55,509,975 (175,597)
query : 1 - 452 (452/452)
6 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014018)
HIX0014018
HIT000491919
(
AK297295
)
(RNA-binding protein Musashi homolog 2; Musashi-2;)
genome : 55,363,205 - 55,757,658 (394,454)
query : 1 - 1,625 (1,625/1,625)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014018)
HIX0014018
HIT000540868 (
ENST00000442934
)
(RNA-binding protein Musashi homolog 2; Musashi-2;)
genome : 55,363,205 - 55,757,658 (394,454)
query : 1 - 1,624 (1,624/1,624)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014018)
HIX0014018
HIT000050687
(
BC017560
)
(RNA-binding protein Musashi homolog 2 isoform b.)
genome : 55,372,046 - 55,710,262 (338,217)
query : 1 - 1,631 (1,631/1,660)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014018)
HIX0014018
HIT000691111 (
ENST00000579180
)
(RNA-binding protein Musashi homolog 2 isoform b.)
genome : 55,372,046 - 55,710,266 (338,221)
query : 1 - 1,635 (1,635/1,635)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014018)
HIX0014024
HIT000690732 (
ENST00000578794
)
(Conserved hypothetical protein.)
genome : 56,066,399 - 56,082,614 (16,216)
query : 1 - 711 (711/711)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 9.5, cyto_nucl 9, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014024)
HIX0014024
HIT000203486 (
NM_006924
)
(Serine/arginine-rich splicing factor 1; Alternative-splicing factor 1; ASF-1; Splicing factor, arginine/serine-rich 1; pre-mRNA-splicing factor SF2, P33 subunit;)
genome : 56,078,281 - 56,084,707 (6,427)
query : 1 - 5,442 (5,442/5,468)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 18, cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014024)
HIX0014024
HIT000397866 (
NM_001078166
)
(Serine/arginine-rich splicing factor 1 isoform 2.)
genome : 56,078,281 - 56,084,707 (6,427)
query : 1 - 5,642 (5,642/5,668)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 7.5, extr 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014024)
HIX0014024
HIT000659193 (
NR_034041
)
(Serine/arginine-rich splicing factor 1 isoform 2.)
genome : 56,078,281 - 56,084,707 (6,427)
query : 1 - 4,721 (4,721/4,747)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 7.5, extr 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014024)
HIX0014024
HIT000259066
(
BC033785
)
(Serine/arginine-rich splicing factor 1 isoform 2.)
genome : 56,080,862 - 56,084,593 (3,732)
query : 1 - 2,026 (2,026/2,059)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 7.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014024)
HIX0014024
HIT000384841
(
AK225711
)
(Serine/arginine-rich splicing factor 1 isoform 2.)
genome : 56,080,854 - 56,084,585 (3,732)
query : 1 - 2,026 (2,026/2,042)
4 exons
identity = 1.000
3'(1.000;0.999;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 7.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014024)
HIX0014024
HIT000059870
(
AB062124
)
Representative transcript
(Serine/arginine-rich splicing factor 1; Alternative-splicing factor 1; ASF-1; Splicing factor, arginine/serine-rich 1; pre-mRNA-splicing factor SF2, P33 subunit;)
genome : 56,080,854 - 56,084,588 (3,735)
query : 1 - 2,751 (2,751/2,765)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 18, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014024)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171097
Mus
sp. (Mouse) : AK150535
Bos
sp. (Cow) : BC119930
Gallus
sp. (Chicken) : CR353588
Tetraodon
sp. (Tetraodon) : CR673320
Pongo
sp. (Orangutan) : CR860145
Danio
sp. (Zebrafish) : ENSDART00000018286
Oryzias
sp. (Medaka) : ENSORLT00000005759
Rattus
sp. (Rat) : ENSRNOT00000013387
Takifugu
sp. (Fugu) : SINFRUT00000136750
Equus
sp. (Horse) : XM_001503422
Pan
sp. (Chimpanzee) : XM_523806
Canis
sp. (Dog) : XM_861705
Monodelphis
sp. (Opossum) : XR_030278
HIX0014024
HIT000034871
(
BC010264
)
(Serine/arginine-rich splicing factor 1; Alternative-splicing factor 1; ASF-1; Splicing factor, arginine/serine-rich 1; pre-mRNA-splicing factor SF2, P33 subunit;)
genome : 56,080,856 - 56,084,533 (3,678)
query : 1 - 2,693 (2,693/2,708)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 18, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014024)
HIX0014024
HIT000694620 (
ENST00000582730
)
(Serine/arginine-rich splicing factor 1 isoform 2.)
genome : 56,080,855 - 56,084,622 (3,768)
query : 1 - 2,983 (2,983/2,983)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 7.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014024)
HIX0014024
HIT000329493
(
AB209558
)
(Serine/arginine-rich splicing factor 1 isoform 2.)
genome : 56,080,855 - 56,084,594 (3,740)
query : 1 - 2,953 (2,953/2,953)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 7.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014024)
HIX0014024
HIT000696534 (
ENST00000584668
)
(Serine/arginine-rich splicing factor 1; Alternative-splicing factor 1; ASF-1; Splicing factor, arginine/serine-rich 1; pre-mRNA-splicing factor SF2, P33 subunit;)
genome : 56,081,163 - 56,083,766 (2,604)
query : 1 - 758 (758/758)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 10.5, mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014024)
HIX0014024
HIT000196253
(
M72709
)
(Serine/arginine-rich splicing factor 1; Alternative-splicing factor 1; ASF-1; Splicing factor, arginine/serine-rich 1; pre-mRNA-splicing factor SF2, P33 subunit;)
genome : 56,081,168 - 56,084,593 (3,426)
query : 2 - 1,717 (1,716/1,717)
4 exons
identity = 0.994
3'(1.000;0.992;0.989;0.997)5'
coverage = 0.999
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 7.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014024)
HIX0014024
HIT000693878 (
ENST00000581979
)
(Serine/arginine-rich splicing factor 1 isoform 2.)
genome : 56,081,168 - 56,084,593 (3,426)
query : 1 - 1,720 (1,720/1,720)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 7.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014024)
HIX0014024
HIT000493151
(
AK298527
)
(Serine/arginine-rich splicing factor 1; Alternative-splicing factor 1; ASF-1; Splicing factor, arginine/serine-rich 1; pre-mRNA-splicing factor SF2, P33 subunit;)
genome : 56,081,714 - 56,084,604 (2,891)
query : 1 - 1,591 (1,591/1,591)
3 exons
identity = 0.996
3'(0.999;0.977;0.988)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014024)
HIX0014024
HIT000696637 (
ENST00000584773
)
(Serine/arginine-rich splicing factor 1; Alternative-splicing factor 1; ASF-1; Splicing factor, arginine/serine-rich 1; pre-mRNA-splicing factor SF2, P33 subunit;)
genome : 56,081,949 - 56,084,622 (2,674)
query : 1 - 1,317 (1,317/1,317)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 18, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014024)
HIX0014024
HIT000696954 (
ENST00000585096
)
(Serine/arginine-rich splicing factor 1; Alternative-splicing factor 1; ASF-1; Splicing factor, arginine/serine-rich 1; pre-mRNA-splicing factor SF2, P33 subunit;)
genome : 56,082,183 - 56,084,634 (2,452)
query : 1 - 568 (568/568)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13, extr 8, nucl 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014024)
HIX0014024
HIT000107404 (
ENST00000258962
)
(Serine/arginine-rich splicing factor 1; Alternative-splicing factor 1; ASF-1; Splicing factor, arginine/serine-rich 1; pre-mRNA-splicing factor SF2, P33 subunit;)
genome : 56,082,210 - 56,084,707 (2,498)
query : 1 - 1,513 (1,513/1,513)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 18, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014024)
HIX0014024
HIT000196208
(
M69040
)
(Serine/arginine-rich splicing factor 1; Alternative-splicing factor 1; ASF-1; Splicing factor, arginine/serine-rich 1; pre-mRNA-splicing factor SF2, P33 subunit;)
genome : 56,082,210 - 56,084,622 (2,413)
query : 1 - 1,428 (1,428/1,428)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 18, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014024)
HIX0014024
HIT000695619 (
ENST00000583741
)
(Serine/arginine-rich splicing factor 1; Alternative-splicing factor 1; ASF-1; Splicing factor, arginine/serine-rich 1; pre-mRNA-splicing factor SF2, P33 subunit;)
genome : 56,082,210 - 56,084,622 (2,413)
query : 1 - 1,465 (1,465/1,465)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 16.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014024)
HIX0014024
HIT000422730
(
AK289933
)
(Serine/arginine-rich splicing factor 1; Alternative-splicing factor 1; ASF-1; Splicing factor, arginine/serine-rich 1; pre-mRNA-splicing factor SF2, P33 subunit;)
genome : 56,082,277 - 56,084,614 (2,338)
query : 3 - 1,355 (1,353/1,355)
4 exons
identity = 0.999
3'(1.000;0.994;1.000;0.997)5'
coverage = 0.999
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 18, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014024)
HIX0014026
HIT000034773
(
BC010061
)
(Meckel syndrome type 1 protein;)
genome : 56,282,802 - 56,296,601 (13,800)
query : 1 - 1,683 (1,683/1,700)
16 exons
identity = 0.999
3'(1.000;0.985;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR010796 : B9 domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 14.5, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014026)
HIX0014026
HIT000002827
(
AK000352
)
(Meckel syndrome type 1 protein;)
genome : 56,282,803 - 56,293,607 (10,805)
query : 4 - 2,064 (2,061/2,081)
15 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 15.5, cyto 7, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014026)
HIX0014026
HIT000654185 (
NM_001165927
)
(Meckel syndrome type 1 protein isoform 2.)
genome : 56,282,797 - 56,296,966 (14,170)
query : 1 - 2,387 (2,387/2,397)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 9.5, cyto_nucl 8, nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014026)
HIX0014026
HIT000206646 (
NM_017777
)
(Meckel syndrome type 1 protein;)
genome : 56,282,797 - 56,296,666 (13,870)
query : 1 - 2,398 (2,398/2,408)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014026)
HIX0014026
HIT000476583 (
ENST00000393119
)
(Meckel syndrome type 1 protein;)
genome : 56,282,803 - 56,296,666 (13,864)
query : 1 - 2,392 (2,392/2,392)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014026)
HIX0014026
HIT000119913 (
ENST00000313863
)
(Meckel syndrome type 1 protein;)
genome : 56,282,814 - 56,296,593 (13,780)
query : 1 - 2,091 (2,091/2,091)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014026)
HIX0014026
HIT000130350 (
ENST00000337050
)
(Meckel syndrome type 1 protein;)
genome : 56,282,912 - 56,296,601 (13,690)
query : 1 - 1,576 (1,576/1,576)
16 exons
identity = 0.997
3'(1.000;0.965;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 14.5, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014026)
HIX0014026
HIT000342114
(
DQ185029
)
(Meckel syndrome type 1 protein;)
genome : 56,282,929 - 56,296,666 (13,738)
query : 1 - 2,266 (2,266/2,267)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR010796 : B9 domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014026)
HIX0014026
HIT000429681
(
AK310815
)
Representative transcript
(Meckel syndrome type 1 protein isoform 2.)
genome : 56,283,101 - 56,296,966 (13,866)
query : 1 - 2,083 (2,083/2,083)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR010796 : B9 domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 9.5, cyto_nucl 8, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014026)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK030982
Rattus
sp. (Rat) : BC099806
Danio
sp. (Zebrafish) : BC124648
Bos
sp. (Cow) : BC149917
Gallus
sp. (Chicken) : CR387630
Tetraodon
sp. (Tetraodon) : CR664925
Oryzias
sp. (Medaka) : ENSORLT00000018084
Pongo
sp. (Orangutan) : ENSPPYT00000010342
Takifugu
sp. (Fugu) : SINFRUT00000131494
Macaca
sp. (Macaque) : XM_001103807
Pan
sp. (Chimpanzee) : XM_001172580
Monodelphis
sp. (Opossum) : XM_001366681
Equus
sp. (Horse) : XM_001503683
Canis
sp. (Dog) : XM_548230
HIX0014026
HIT000636574 (
ENST00000537529
)
(Meckel syndrome type 1 protein isoform 2.)
genome : 56,283,101 - 56,296,966 (13,866)
query : 1 - 2,083 (2,083/2,083)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 9.5, cyto_nucl 8, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014026)
HIX0014026
HIT000476584 (
ENST00000393120
)
(Meckel syndrome type 1 protein;)
genome : 56,283,102 - 56,296,597 (13,496)
query : 1 - 1,926 (1,926/1,926)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 13, cyto 13, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014026)
HIX0014026
HIT000495644
(
AK301020
)
(Meckel syndrome type 1 protein;)
genome : 56,283,102 - 56,296,597 (13,496)
query : 1 - 1,926 (1,926/1,926)
17 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.986;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19, nucl 14, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014026)
HIX0014026
HIT000645153 (
ENST00000546108
)
(Meckel syndrome type 1 protein;)
genome : 56,283,102 - 56,296,597 (13,496)
query : 1 - 1,926 (1,926/1,926)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 13, cyto 13, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014026)
HIX0014026
HIT000693662 (
ENST00000581761
)
(Meckel syndrome type 1 protein;)
genome : 56,288,020 - 56,296,606 (8,587)
query : 1 - 812 (812/812)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 9.5, cyto_nucl 9.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014026)
HIX0014026
HIT000692047 (
ENST00000580127
)
(Meckel syndrome type 1 protein;)
genome : 56,291,167 - 56,296,666 (5,500)
query : 1 - 843 (843/843)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.5, cyto 14.5, nucl 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014026)
HIX0014026
HIT000690727 (
ENST00000578789
)
(Meckel syndrome type 1 protein;)
genome : 56,291,619 - 56,296,614 (4,996)
query : 1 - 558 (558/568)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.982
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014026)
HIX0225192
HIT000692857 (
ENST00000580947
)
(Transcription initiation Spt4-like family protein.)
genome : 56,423,573 - 56,430,454 (6,882)
query : 1 - 574 (574/574)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225192)
HIX0225192
HIT000242072
(
AB081837
)
Representative transcript
(Conserved hypothetical protein.)
genome : 56,429,861 - 56,494,480 (64,620)
query : 1 - 5,285 (5,285/5,294)
10 exons
identity = 0.998
3'(0.999;0.998;0.990;1.000;1.000;1.000;1.000;
1.000;0.991;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, cyto_pero 6.66667, plas 6.5, extr_plas 6,
extr 4.5, E.R. 4, pero 3.5, mito_pero 3.33333,
cysk_plas 3.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225192)
HIX0225192
HIT000506176 (
ENST00000407977
)
(Conserved hypothetical protein.)
genome : 56,429,861 - 56,494,713 (64,853)
query : 1 - 5,516 (5,516/5,516)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, cyto_pero 6.66667, plas 6.5, extr_plas 6,
extr 4.5, E.R. 4, pero 3.5, mito_pero 3.33333,
cysk_plas 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225192)
HIX0225192
HIT000602344 (
ENST00000500597
)
(Conserved hypothetical protein.)
genome : 56,429,861 - 56,494,480 (64,620)
query : 1 - 5,160 (5,160/5,160)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, cyto_pero 6.66667, plas 6.5, extr_plas 6,
extr 4.5, E.R. 4, pero 3.5, mito_pero 3.33333,
cysk_plas 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225192)
HIX0202651
pHIT000029886 ( pHIT000029886 )
Representative transcript
(Conserved hypothetical protein.)
genome : 56,553,978 - 56,595,929 (41,952)
query : 1 - 4,269 (4,269/4,269)
20 exons
InterPro :
IPR000306 : FYVE zinc finger
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR010569 : Myotubularin-like phosphatase domain
IPR011011 : Zinc finger, FYVE/PHD-type
IPR016130 : Protein-tyrosine phosphatase, active site
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202651)
CAGE tag :
H09BA52A0305
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF262986
Bos
sp. (Cow) : BC148962
Tetraodon
sp. (Tetraodon) : CR708755
Oryzias
sp. (Medaka) : ENSORLT00000014091
Pongo
sp. (Orangutan) : ENSPPYT00000009622
Takifugu
sp. (Fugu) : SINFRUT00000173287
Monodelphis
sp. (Opossum) : XM_001366419
Equus
sp. (Horse) : XM_001500609
Pan
sp. (Chimpanzee) : XM_511909
Danio
sp. (Zebrafish) : XM_692082
Canis
sp. (Dog) : XM_861901
HIX0014039
HIT000051580
(
BC036012
)
(E3 ubiquitin-protein ligase TRIM37; EC=6.3.2.-; Mulibrey nanism protein; Tripartite motif-containing protein 37;)
genome : 57,060,012 - 57,184,118 (124,107)
query : 1 - 3,458 (3,458/3,521)
25 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR000315 : Zinc finger, B-box
IPR002083 : MATH
IPR003649 : B-box, C-terminal
IPR008974 : TRAF-like
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 16.5, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014039)
HIX0014039
HIT000316065 (
NM_001005207
)
(E3 ubiquitin-protein ligase TRIM37; EC=6.3.2.-; Mulibrey nanism protein; Tripartite motif-containing protein 37;)
genome : 57,059,999 - 57,184,266 (124,268)
query : 1 - 3,619 (3,619/3,623)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 16.5, nucl 13.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014039)
HIX0014039
HIT000476533 (
ENST00000393066
)
(E3 ubiquitin-protein ligase TRIM37; EC=6.3.2.-; Mulibrey nanism protein; Tripartite motif-containing protein 37;)
genome : 57,060,012 - 57,184,282 (124,271)
query : 1 - 3,622 (3,622/3,622)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 16.5, nucl 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014039)
HIX0014039
HIT000425256
(
AK292459
)
(E3 ubiquitin-protein ligase TRIM37; EC=6.3.2.-; Mulibrey nanism protein; Tripartite motif-containing protein 37;)
genome : 57,060,228 - 57,184,154 (123,927)
query : 1 - 3,278 (3,278/3,278)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR000315 : Zinc finger, B-box
IPR002083 : MATH
IPR003649 : B-box, C-terminal
IPR008974 : TRAF-like
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 15.5, nucl 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014039)
HIX0014039
HIT000054739
(
BX537955
)
(E3 ubiquitin-protein ligase TRIM37; EC=6.3.2.-; Mulibrey nanism protein; Tripartite motif-containing protein 37;)
genome : 57,075,566 - 57,184,101 (108,536)
query : 1 - 4,304 (4,304/4,367)
24 exons
identity = 1.000
3'(0.998;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014039)
HIX0014039
HIT000008922
(
AK025648
)
(E3 ubiquitin-protein ligase TRIM37; EC=6.3.2.-; Mulibrey nanism protein; Tripartite motif-containing protein 37;)
genome : 57,075,566 - 57,157,208 (81,643)
query : 1 - 3,428 (3,428/3,444)
17 exons
identity = 0.999
3'(0.999;1.000;1.000;0.992)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR002083 : MATH
IPR008974 : TRAF-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014039)
HIX0014039
HIT000074095
(
AF213365
)
(E3 ubiquitin-protein ligase TRIM37; EC=6.3.2.-; Mulibrey nanism protein; Tripartite motif-containing protein 37;)
genome : 57,075,566 - 57,184,082 (108,517)
query : 5 - 4,331 (4,327/4,345)
24 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 6.3.2.-
InterPro :
IPR000315 : Zinc finger, B-box
IPR002083 : MATH
IPR003649 : B-box, C-terminal
IPR008974 : TRAF-like
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 16.5, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014039)
HIX0014039
HIT000205384 (
NM_015294
)
(E3 ubiquitin-protein ligase TRIM37; EC=6.3.2.-; Mulibrey nanism protein; Tripartite motif-containing protein 37;)
genome : 57,075,561 - 57,184,266 (108,706)
query : 1 - 4,516 (4,516/4,520)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 16.5, nucl 13.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014039)
HIX0014039
HIT000689504 (
ENST00000577554
)
(E3 ubiquitin-protein ligase TRIM37; EC=6.3.2.-; Mulibrey nanism protein; Tripartite motif-containing protein 37;)
genome : 57,075,561 - 57,184,101 (108,541)
query : 1 - 4,310 (4,310/4,310)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014039)
HIX0014039
HIT000108341 (
ENST00000262294
)
(E3 ubiquitin-protein ligase TRIM37; EC=6.3.2.-; Mulibrey nanism protein; Tripartite motif-containing protein 37;)
genome : 57,075,563 - 57,184,082 (108,520)
query : 1 - 4,330 (4,330/4,330)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 16.5, nucl 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014039)
HIX0014039
HIT000000615
(
AB020705
)
Representative transcript
(E3 ubiquitin-protein ligase TRIM37; EC=6.3.2.-; Mulibrey nanism protein; Tripartite motif-containing protein 37;)
genome : 57,075,567 - 57,183,867 (108,301)
query : 1 - 4,111 (4,111/4,111)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 16.5, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014039)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB071078
Gallus
sp. (Chicken) : AJ719628
Mus
sp. (Mouse) : AK140822
Rattus
sp. (Rat) : BC100655
Bos
sp. (Cow) : BC154401
Pongo
sp. (Orangutan) : CR857712
Tetraodon
sp. (Tetraodon) : GSTENT00014650001
Takifugu
sp. (Fugu) : SINFRUT00000150953
Monodelphis
sp. (Opossum) : XM_001362824
Equus
sp. (Horse) : XM_001503728
Pan
sp. (Chimpanzee) : XM_511914
Danio
sp. (Zebrafish) : XM_690734
Canis
sp. (Dog) : XM_848185
HIX0014039
HIT000357429 (
ENST00000376149
)
(E3 ubiquitin-protein ligase TRIM37; EC=6.3.2.-; Mulibrey nanism protein; Tripartite motif-containing protein 37;)
genome : 57,075,569 - 57,184,266 (108,698)
query : 1 - 4,391 (4,391/4,391)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 16.5, nucl 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014039)
HIX0014039
HIT000476532 (
ENST00000393065
)
(E3 ubiquitin-protein ligase TRIM37; EC=6.3.2.-; Mulibrey nanism protein; Tripartite motif-containing protein 37;)
genome : 57,076,348 - 57,184,187 (107,840)
query : 1 - 3,548 (3,548/3,548)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 17.5, cyto 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014039)
HIX0014039
HIT000489474
(
AK294850
)
(E3 ubiquitin-protein ligase TRIM37; EC=6.3.2.-; Mulibrey nanism protein; Tripartite motif-containing protein 37;)
genome : 57,076,348 - 57,184,187 (107,840)
query : 1 - 3,548 (3,548/3,548)
23 exons
identity = 0.999
3'(1.000;0.991;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR000315 : Zinc finger, B-box
IPR002083 : MATH
IPR003649 : B-box, C-terminal
IPR008974 : TRAF-like
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 17.5, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014039)
HIX0014039
HIT000422471
(
AK289674
)
(E3 ubiquitin-protein ligase TRIM37; EC=6.3.2.-; Mulibrey nanism protein; Tripartite motif-containing protein 37;)
genome : 57,076,571 - 57,184,097 (107,527)
query : 1 - 3,337 (3,337/3,337)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR000315 : Zinc finger, B-box
IPR002083 : MATH
IPR003649 : B-box, C-terminal
IPR008974 : TRAF-like
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 16.5, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014039)
HIX0195470
pHIT000029863 ( pHIT000029863 )
Representative transcript
(Hypothetical short protein.)
genome : 55,889,077 - 55,889,295 (219)
query : 1 - 219 (219/219)
1 exon
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195470)
CAGE tag :
H04BA26O1207,H05BD37N1308,H08BA01O0508
H08BA50E0307,H21BA95M0304
HIX0202651
pHIT000029886 ( pHIT000029886 )
Representative transcript
(Conserved hypothetical protein.)
genome : 56,553,978 - 56,595,929 (41,952)
query : 1 - 4,269 (4,269/4,269)
20 exons
InterPro :
IPR000306 : FYVE zinc finger
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR010569 : Myotubularin-like phosphatase domain
IPR011011 : Zinc finger, FYVE/PHD-type
IPR016130 : Protein-tyrosine phosphatase, active site
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202651)
CAGE tag :
H04BA64P0705,H04BB14C0204,H08BA08C1602
H08BA53H2101,H09BA52A0305
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF262986
Bos
sp. (Cow) : BC148962
Tetraodon
sp. (Tetraodon) : CR708755
Oryzias
sp. (Medaka) : ENSORLT00000014091
Pongo
sp. (Orangutan) : ENSPPYT00000009622
Takifugu
sp. (Fugu) : SINFRUT00000173287
Monodelphis
sp. (Opossum) : XM_001366419
Equus
sp. (Horse) : XM_001500609
Pan
sp. (Chimpanzee) : XM_511909
Danio
sp. (Zebrafish) : XM_692082
Canis
sp. (Dog) : XM_861901
HIX0202636
pHIT000029891 ( pHIT000029891 )
Representative transcript
(Conserved hypothetical protein.)
genome : 56,553,978 - 56,565,045 (11,068)
query : 1 - 552 (552/552)
2 exons
InterPro :
IPR002164 : Nucleosome assembly protein (NAP)
GO :
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202636)
CAGE tag :
H04BA47C0308,H04BA74D0910,H04BA90A2302
H04BA92E1202,H04BA98A2005
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : XM_001079451
Pan
sp. (Chimpanzee) : XR_022374
AC015883.6
55500001-55566861 F -
NCBI
AC007431.8
55566862-55712090 F +
NCBI
AC005325.1
55712091-55858516 F -
NCBI
AC015845.8
55858517-56031437 F +
NCBI
AC015813.12
56031438-56190831 F +
NCBI
AC005962.1
56190832-56317822 F +
NCBI
AC004687.2
56317823-56490941 F -
NCBI
AC023992.8
56490942-56542409 F +
NCBI
AC005666.1
56542410-56658117 F +
NCBI
AC011195.14
56658118-56794949 F -
NCBI
AC025521.21
56794950-56914115 F -
NCBI
AC100832.2
56914116-57082570 F -
NCBI
AC005207.2
57082571-57100000 F +
NCBI