bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0014364
HIT000489540
(
AK294916
)
(Transmembrane protein 241.)
genome : 20,777,719 - 21,017,896 (240,178)
query : 1 - 1,404 (1,404/1,404)
16 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014364)
HIX0014364
HIT000548400 (
ENST00000450466
)
(Transmembrane protein 241.)
genome : 20,777,719 - 21,017,896 (240,178)
query : 1 - 1,404 (1,404/1,404)
16 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014364)
HIX0014364
HIT000693349 (
ENST00000581444
)
(Transmembrane protein 241.)
genome : 20,777,719 - 21,017,896 (240,178)
query : 1 - 1,404 (1,404/1,404)
16 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014364)
HIX0014364
HIT000211004 (
NM_032933
)
(Transmembrane protein 241.)
genome : 20,875,977 - 21,017,925 (141,949)
query : 1 - 2,994 (2,994/2,994)
15 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014364)
HIX0014364
HIT000046120
(
AK126247
)
(Transmembrane protein 241.)
genome : 20,875,981 - 21,017,925 (141,945)
query : 1 - 2,941 (2,941/2,941)
14 exons
identity = 0.994
3'(1.000;1.000;0.994)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, nucl 5, cyto 3.5, mito_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014364)
HIX0014364
HIT000578008 (
ENST00000473688
)
(Transmembrane protein 241.)
genome : 20,875,981 - 21,017,925 (141,945)
query : 1 - 2,941 (2,941/2,941)
14 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, nucl 5, cyto 3.5, mito_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014364)
HIX0014364
HIT000043496
(
AK123623
)
(Transmembrane protein 241.)
genome : 20,875,981 - 21,017,923 (141,943)
query : 1 - 2,859 (2,859/2,859)
11 exons
identity = 0.999
3'(1.000;0.994)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, mito_pero 5.5, mito 5, E.R._mito 5, plas 4,
cyto 3, pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014364)
HIX0014364
HIT000581216 (
ENST00000477053
)
(Transmembrane protein 241.)
genome : 20,875,981 - 21,017,923 (141,943)
query : 1 - 2,859 (2,859/2,859)
11 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, mito_pero 5.5, mito 5, E.R._mito 5, plas 4,
cyto 3, pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014364)
HIX0014364
HIT000364511 (
ENST00000383233
)
(Transmembrane protein 241.)
genome : 20,875,981 - 21,017,869 (141,889)
query : 1 - 2,934 (2,934/2,934)
15 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014364)
HIX0014364
HIT000340716
(
BC114510
)
(Transmembrane protein 241.)
genome : 20,877,612 - 21,017,869 (140,258)
query : 1 - 1,254 (1,254/1,254)
14 exons
identity = 0.999
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, cyto 13.5, cyto_nucl 11, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014364)
HIX0014364
HIT000340742
(
BC114561
)
Representative transcript
(Transmembrane protein 241.)
genome : 20,877,612 - 21,017,869 (140,258)
query : 1 - 1,303 (1,303/1,303)
15 exons
identity = 0.999
3'(1.000;1.000;0.992)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014364)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK031517
Gallus
sp. (Chicken) : CR386909
Bos
sp. (Cow) : ENSBTAT00000031064
Canis
sp. (Dog) : ENSCAFT00000028919
Equus
sp. (Horse) : ENSECAT00000015681
Pongo
sp. (Orangutan) : ENSPPYT00000010575
Rattus
sp. (Rat) : XM_001057715
Macaca
sp. (Macaque) : XM_001093133
Pan
sp. (Chimpanzee) : XM_001153952
Monodelphis
sp. (Opossum) : XM_001366141
HIX0014364
HIT000565253 (
ENST00000460322
)
(Transmembrane protein 241.)
genome : 20,877,858 - 21,017,910 (140,053)
query : 1 - 889 (889/889)
12 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014364)
HIX0014364
HIT000660446
(
AB253738
)
(Transmembrane protein 241.)
genome : 20,877,971 - 21,017,833 (139,863)
query : 1 - 908 (908/908)
15 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014364)
HIX0014364
HIT000660447
(
AB253739
)
(Conserved hypothetical protein.)
genome : 20,877,972 - 21,017,833 (139,862)
query : 1 - 1,022 (1,022/1,022)
16 exons
identity = 0.999
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, nucl 4, cyto 4, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014364)
HIX0014364
HIT000498177
(
AK303553
)
(Transmembrane protein 241.)
genome : 20,877,988 - 21,017,817 (139,830)
query : 1 - 829 (829/829)
14 exons
identity = 0.999
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, cyto 3, mito 2, cyto_nucl 2, cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014364)
HIX0014364
HIT000641207 (
ENST00000542162
)
(Transmembrane protein 241.)
genome : 20,877,988 - 21,017,817 (139,830)
query : 1 - 829 (829/829)
14 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014364)
HIX0014364
HIT000690462 (
ENST00000578520
)
(Transmembrane protein 241.)
genome : 20,932,219 - 21,017,919 (85,701)
query : 1 - 692 (692/692)
10 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014364)
HIX0014364
HIT000586344 (
ENST00000482411
)
(Transmembrane protein 241.)
genome : 20,936,558 - 21,017,903 (81,346)
query : 1 - 662 (662/667)
10 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.993
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, mito 2, cyto_nucl 2, nucl 1.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014364)
HIX0014364
HIT000600874 (
ENST00000497608
)
(Transmembrane protein 241.)
genome : 20,936,558 - 21,017,896 (81,339)
query : 1 - 669 (669/669)
11 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014364)
HIX0014364
HIT000689482 (
ENST00000577531
)
(Transmembrane protein 241.)
genome : 20,936,594 - 21,017,817 (81,224)
query : 1 - 590 (590/590)
11 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014364)
HIX0014364
HIT000694230 (
ENST00000582336
)
(Transmembrane protein 241.)
genome : 20,945,599 - 21,017,877 (72,279)
query : 1 - 625 (625/625)
10 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014364)
HIX0014364
HIT000691945 (
ENST00000580025
)
(Transmembrane protein 241.)
genome : 20,953,654 - 21,017,896 (64,243)
query : 1 - 568 (568/571)
7 exons
identity = 0.986
3'(1.000;1.000;1.000)5'
coverage = 0.995
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014364)
HIX0014364
HIT000482750 (
ENST00000399707
)
(Transmembrane protein 241.)
genome : 20,956,839 - 21,017,925 (61,087)
query : 1 - 481 (481/481)
6 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 20, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014364)
HIX0225380
HIT000696822 (
ENST00000584960
)
(Conserved hypothetical protein.)
genome : 21,033,251 - 21,043,283 (10,033)
query : 1 - 572 (572/572)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 9.5, cyto_nucl 9, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225380)
HIX0225380
HIT000695928 (
ENST00000584052
)
(Conserved hypothetical protein.)
genome : 21,033,252 - 21,044,258 (11,007)
query : 1 - 659 (659/659)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.5, nucl 11, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225380)
HIX0225264
HIT000696854 (
ENST00000584992
)
(Conserved hypothetical protein.)
genome : 21,044,520 - 21,047,541 (3,022)
query : 1 - 396 (396/396)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 16, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225264)
HIX0225264
HIT000008232
(
AK024958
)
(Conserved hypothetical protein.)
genome : 21,045,343 - 21,046,979 (1,637)
query : 1 - 1,637 (1,637/1,654)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225264)
HIX0225264
HIT000499195
(
AK304571
)
Representative transcript
(Serine/threonine-protein kinase RIO3; EC=2.7.11.1; RIO kinase 3; sudD homolog;)
genome : 21,046,099 - 21,061,783 (15,685)
query : 1 - 1,412 (1,412/1,412)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;0.994;1.000;1.000;1.000;
0.998)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 9.5, extr 8, mito 6, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225264)
HIX0225264
HIT000696005 (
ENST00000584130
)
(Conserved hypothetical protein.)
genome : 21,046,099 - 21,057,167 (11,069)
query : 1 - 591 (591/591)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10.5, extr 7, mito 6, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225264)
HIX0225264
HIT000429649
(
AK310783
)
(Serine/threonine-protein kinase RIO3; EC=2.7.11.1; RIO kinase 3; sudD homolog;)
genome : 21,046,133 - 21,061,329 (15,197)
query : 1 - 888 (888/888)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR018934 : RIO domain
GO :
0003824 : Molecular Function : catalytic activity
0005524 : Molecular Function : ATP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 14.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225264)
HIX0225264
HIT000693245 (
ENST00000581339
)
(RIO domain containing protein.)
genome : 21,046,133 - 21,061,329 (15,197)
query : 1 - 888 (888/888)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 14.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225264)
HIX0225264
HIT000689205 (
ENST00000577250
)
(RIO domain containing protein.)
genome : 21,057,152 - 21,066,552 (9,401)
query : 1 - 670 (670/685)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 11, nucl 9.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225264)
HIX0225264
HIT000055475
(
BX640929
)
(Serine/threonine-protein kinase RIO3; EC=2.7.11.1; RIO kinase 3; sudD homolog;)
genome : 21,058,971 - 21,063,098 (4,128)
query : 1 - 2,378 (2,378/2,396)
2 exons
identity = 0.996
5'(0.998;0.995)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, mito 3, extr 2, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225264)
HIX0225264
HIT000693127 (
ENST00000581220
)
(Conserved hypothetical protein.)
genome : 21,058,971 - 21,063,101 (4,131)
query : 1 - 2,384 (2,384/2,384)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, mito 3, extr 2, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225264)
HIX0225262
pHIT000091971 ( pHIT000091971 )
(Conserved hypothetical protein.)
genome : 21,080,250 - 21,111,668 (31,419)
query : 1 - 1,491 (1,491/1,491)
14 exons
InterPro :
IPR009755 : Colon cancer-associated Mic1-like
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225262)
CAGE tag :
H05BE48I1603
HIX0225262
HIT000698997 (
ENST00000587153
)
(Conserved hypothetical protein.)
genome : 21,083,483 - 21,084,686 (1,204)
query : 1 - 554 (554/554)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225262)
HIX0225262
HIT000699532 (
ENST00000587690
)
(Conserved hypothetical protein.)
genome : 21,083,484 - 21,095,850 (12,367)
query : 1 - 660 (660/660)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225262)
HIX0225262
HIT000701698 (
ENST00000589860
)
(Conserved hypothetical protein.)
genome : 21,083,495 - 21,099,130 (15,636)
query : 1 - 787 (787/787)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225262)
HIX0225262
HIT000703940 (
ENST00000592119
)
(Conserved hypothetical protein.)
genome : 21,083,499 - 21,089,641 (6,143)
query : 1 - 565 (565/565)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 11, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225262)
HIX0039703
HIT000702931 (
ENST00000591107
)
(Niemann-Pick C1 protein; Precursor;)
genome : 21,086,307 - 21,115,586 (29,280)
query : 1 - 731 (731/731)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039703)
HIX0039703
HIT000702550 (
ENST00000590723
)
(Niemann-Pick C1 protein; Precursor;)
genome : 21,102,279 - 21,113,481 (11,203)
query : 1 - 755 (755/755)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039703)
HIX0225262
HIT000007644
(
AK024370
)
Representative transcript
(Conserved hypothetical protein.)
genome : 21,103,367 - 21,107,187 (3,821)
query : 1 - 3,819 (3,819/3,819)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225262)
HIX0225262
HIT000702218 (
ENST00000590387
)
(Conserved hypothetical protein.)
genome : 21,107,838 - 21,109,446 (1,609)
query : 1 - 332 (332/332)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, cyto 12, nucl 10, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225262)
HIX0039703
HIT000427357
(
AK308491
)
(Uncharacterized protein C18orf8 homolog; Colon cancer-associated protein Mic1; Mic-1;)
genome : 21,108,363 - 21,113,404 (5,042)
query : 1 - 1,413 (1,413/1,413)
2 exons
identity = 0.995
3'(0.995;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.8333, nucl 12.5, cyto 10, extr 9,
cyto_pero 6.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039703)
HIX0039703
HIT000705098 (
ENST00000593280
)
(Conserved hypothetical protein.)
genome : 21,108,363 - 21,113,404 (5,042)
query : 1 - 1,415 (1,415/1,415)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.3333, cyto 11, nucl 10.5, extr 10,
cyto_pero 6.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039703)
HIX0039703
HIT000698002 (
ENST00000586150
)
(Niemann-Pick C1 protein; Precursor;)
genome : 21,109,257 - 21,115,664 (6,408)
query : 1 - 571 (571/571)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039703)
HIX0225262
HIT000703190 (
ENST00000591367
)
(Colon cancer-associated Mic1-like domain containing protein.)
genome : 21,109,302 - 21,111,746 (2,445)
query : 1 - 721 (721/721)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, cyto_nucl 8.5, nucl 6.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225262)
HIX0225262
HIT000704899 (
ENST00000593081
)
(Colon cancer-associated Mic1-like domain containing protein.)
genome : 21,109,560 - 21,111,746 (2,187)
query : 1 - 675 (675/675)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225262)
HIX0225262
HIT000704500 (
ENST00000592682
)
(Colon cancer-associated Mic1-like domain containing protein.)
genome : 21,109,929 - 21,110,500 (572)
query : 1 - 387 (387/387)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, extr 11, cyto_nucl 9, mito 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225262)
HIX0225262
HIT000701248 (
ENST00000589409
)
(Colon cancer-associated Mic1-like domain containing protein.)
genome : 21,109,930 - 21,111,743 (1,814)
query : 1 - 706 (706/706)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10, extr 9, cyto 8.5, mito 7, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225262)
HIX0039703
HIT000110413 (
ENST00000269228
)
(Niemann-Pick C1 protein; Precursor;)
genome : 21,111,401 - 21,166,862 (55,462)
query : 1 - 5,157 (5,157/5,157)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039703)
HIX0039703
HIT000197317 (
NM_000271
)
(Niemann-Pick C1 protein; Precursor;)
genome : 21,111,464 - 21,166,581 (55,118)
query : 1 - 4,813 (4,813/4,827)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039703)
HIX0039703
HIT000260823
(
BC063302
)
(Niemann-Pick C1 protein; Precursor;)
genome : 21,111,464 - 21,166,404 (54,941)
query : 1 - 4,636 (4,636/4,650)
25 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.995;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.989;1.000;1.000;0.994)5'
coverage = 1.000
InterPro :
IPR000731 : Sterol-sensing domain
IPR003392 : Patched
IPR004765 : Niemann-Pick C type protein
GO :
0008158 : Molecular Function : hedgehog receptor activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0030301 : Biological Process : cholesterol transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039703)
HIX0039703
HIT000061676
(
AF002020
)
Representative transcript
(Niemann-Pick C1 protein; Precursor;)
genome : 21,111,464 - 21,166,428 (54,965)
query : 3 - 4,664 (4,662/4,673)
25 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.995;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000731 : Sterol-sensing domain
IPR003392 : Patched
IPR004765 : Niemann-Pick C type protein
GO :
0008158 : Molecular Function : hedgehog receptor activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0030301 : Biological Process : cholesterol transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039703)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF003348
Canis
sp. (Dog) : AF315034
Bos
sp. (Cow) : BC151276
Gallus
sp. (Chicken) : ENSGALT00000024240
Macaca
sp. (Macaque) : ENSMMUT00000030245
Oryzias
sp. (Medaka) : ENSORLT00000022134
Pongo
sp. (Orangutan) : ENSPPYT00000010579
Tetraodon
sp. (Tetraodon) : GSTENT00027641001
Takifugu
sp. (Fugu) : SINFRUT00000137061
Pan
sp. (Chimpanzee) : XM_001155116
Monodelphis
sp. (Opossum) : XM_001365837
Equus
sp. (Horse) : XM_001490178
HIX0039703
HIT000328983
(
AB209048
)
(Niemann-Pick C1 protein; Precursor;)
genome : 21,111,465 - 21,166,342 (54,878)
query : 1 - 4,573 (4,573/4,573)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.996;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000731 : Sterol-sensing domain
IPR003392 : Patched
IPR004765 : Niemann-Pick C type protein
GO :
0008158 : Molecular Function : hedgehog receptor activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0030301 : Biological Process : cholesterol transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039703)
HIX0039703
HIT000700707 (
ENST00000588867
)
(Niemann-Pick C1 protein; Precursor;)
genome : 21,111,686 - 21,115,664 (3,979)
query : 1 - 2,000 (2,000/2,000)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16.5, extr_plas 9, pero 5, mito 4.5,
E.R._mito 3.5, cyto_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039703)
HIX0039703
HIT000488403
(
AK293779
)
(Niemann-Pick C1 protein; Precursor;)
genome : 21,111,910 - 21,140,306 (28,397)
query : 1 - 3,171 (3,171/3,171)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000731 : Sterol-sensing domain
IPR003392 : Patched
IPR004765 : Niemann-Pick C type protein
GO :
0008158 : Molecular Function : hedgehog receptor activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0030301 : Biological Process : cholesterol transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039703)
HIX0039703
HIT000510486 (
ENST00000412552
)
(Niemann-Pick C1 protein; Precursor;)
genome : 21,111,910 - 21,140,306 (28,397)
query : 1 - 3,171 (3,171/3,171)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039703)
HIX0039703
HIT000702875 (
ENST00000591051
)
(Niemann-Pick C1 protein; Precursor;)
genome : 21,111,910 - 21,140,306 (28,397)
query : 1 - 3,171 (3,171/3,171)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039703)
HIX0039703
HIT000699007 (
ENST00000587163
)
(Niemann-Pick C1 protein; Precursor;)
genome : 21,113,166 - 21,114,524 (1,359)
query : 1 - 431 (431/431)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, E.R._mito 4.5, pero 4, E.R. 3.5, extr 3,
nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039703)
HIX0039703
HIT000703777 (
ENST00000591955
)
(Niemann-Pick C1 protein; Precursor;)
genome : 21,116,664 - 21,118,889 (2,226)
query : 1 - 561 (561/561)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, cyto_nucl 5.5, nucl 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039703)
HIX0039703
HIT000702899 (
ENST00000591075
)
(Niemann-Pick C1 protein; Precursor;)
genome : 21,116,706 - 21,119,862 (3,157)
query : 1 - 809 (809/809)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039703)
HIX0039703
HIT000490339
(
AK295715
)
(Niemann-Pick C1 protein; Precursor;)
genome : 21,119,694 - 21,166,451 (46,758)
query : 1 - 2,790 (2,790/2,790)
16 exons
identity = 0.998
3'(0.996;0.989;1.000;1.000;1.000;1.000;0.995;
1.000;0.990;1.000;0.997;1.000;0.996;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000731 : Sterol-sensing domain
IPR004765 : Niemann-Pick C type protein
GO :
0016021 : Cellular Component : integral component of membrane
0030301 : Biological Process : cholesterol transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039703)
HIX0039703
HIT000639653 (
ENST00000540608
)
(Niemann-Pick C1 protein; Precursor;)
genome : 21,119,694 - 21,166,451 (46,758)
query : 1 - 2,790 (2,790/2,790)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039703)
HIX0039703
HIT000698564 (
ENST00000586718
)
(Niemann-Pick C1 protein; Precursor;)
genome : 21,119,787 - 21,121,336 (1,550)
query : 1 - 574 (574/574)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, plas 6, cyto 2, mito 1.5, cyto_nucl 1.5,
E.R._mito 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039703)
HIX0039703
HIT000702135 (
ENST00000590301
)
(Niemann-Pick C1 protein; Precursor;)
genome : 21,131,510 - 21,134,949 (3,440)
query : 1 - 410 (410/410)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039703)
HIX0039703
HIT000699067 (
ENST00000587223
)
(Niemann-Pick C1 protein; Precursor;)
genome : 21,153,416 - 21,156,911 (3,496)
query : 1 - 590 (590/590)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 4.5, cyto_nucl 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039703)
HIX0014366
HIT000703999 (
ENST00000592179
)
(Ankyrin repeat domain-containing protein 29;)
genome : 21,178,890 - 21,242,849 (63,960)
query : 1 - 3,361 (3,361/3,361)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, nucl 1, cyto 1, cyto_nucl 1, pero 1, lyso 1,
cyto_pero 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014366)
HIX0014366
HIT000214890 (
NM_173505
)
(Ankyrin repeat domain-containing protein 29;)
genome : 21,179,979 - 21,242,849 (62,871)
query : 3 - 2,274 (2,272/2,291)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, nucl 1, cyto 1, cyto_nucl 1, pero 1, lyso 1,
cyto_pero 1
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014366)
HIX0014366
HIT000043070
(
AK123197
)
(Ankyrin repeat domain-containing protein 29.)
genome : 21,179,974 - 21,227,961 (47,988)
query : 1 - 3,597 (3,597/3,597)
7 exons
identity = 0.997
3'(0.997;1.000;1.000;0.990;0.960;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014366)
HIX0014366
HIT000703103 (
ENST00000591280
)
(Ankyrin repeat domain-containing protein 29.)
genome : 21,179,974 - 21,227,961 (47,988)
query : 1 - 3,597 (3,597/3,597)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.960;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 4.5, mito 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014366)
HIX0014366
HIT000112458 (
ENST00000284207
)
(Ankyrin repeat-containing domain containing protein.)
genome : 21,179,980 - 21,229,166 (49,187)
query : 12 - 2,017 (2,006/2,017)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.975)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014366)
HIX0014366
HIT000041076
(
BC030622
)
(Ankyrin repeat domain-containing protein 29;)
genome : 21,180,009 - 21,242,849 (62,841)
query : 6 - 2,247 (2,242/2,262)
10 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;0.990;1.000;
1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, nucl 1, cyto 1, cyto_nucl 1, pero 1, lyso 1,
cyto_pero 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014366)
HIX0014366
HIT000014389
(
AK057782
)
(Ankyrin repeat domain-containing protein 29.)
genome : 21,180,424 - 21,242,779 (62,356)
query : 1 - 1,659 (1,659/1,659)
9 exons
identity = 0.997
3'(0.995;0.990;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014366)
HIX0014366
HIT000123338 (
ENST00000322980
)
(Ankyrin repeat domain-containing protein 29.)
genome : 21,180,424 - 21,242,779 (62,356)
query : 1 - 1,658 (1,658/1,658)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014366)
HIX0014366
HIT000699605 (
ENST00000587763
)
(Ankyrin repeat domain-containing protein 29.)
genome : 21,181,010 - 21,209,884 (28,875)
query : 1 - 694 (694/694)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 15, mito 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014366)
HIX0014366
HIT000432533
(
AK313667
)
Representative transcript
(Ankyrin repeat domain-containing protein 29;)
genome : 21,181,190 - 21,242,767 (61,578)
query : 1 - 979 (979/979)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, nucl 1, cyto 1, cyto_nucl 1, pero 1, lyso 1,
cyto_pero 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014366)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK090336
Danio
sp. (Zebrafish) : BC095639
Gallus
sp. (Chicken) : CR391076
Canis
sp. (Dog) : ENSCAFT00000028882
Oryzias
sp. (Medaka) : ENSORLT00000001849
Pongo
sp. (Orangutan) : ENSPPYT00000010580
Tetraodon
sp. (Tetraodon) : GSTENT00032721001
Takifugu
sp. (Fugu) : SINFRUT00000161710
Macaca
sp. (Macaque) : XM_001095064
Pan
sp. (Chimpanzee) : XM_001155733
Monodelphis
sp. (Opossum) : XM_001365721
Equus
sp. (Horse) : XM_001491807
Rattus
sp. (Rat) : XM_574104
HIX0014366
HIT000703439 (
ENST00000591617
)
(Ankyrin repeat domain-containing protein 29.)
genome : 21,181,241 - 21,199,788 (18,548)
query : 1 - 559 (559/559)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 14, extr 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014366)
HIX0014366
HIT000698357 (
ENST00000586511
)
(Ankyrin repeat domain-containing protein 29.)
genome : 21,198,505 - 21,199,687 (1,183)
query : 1 - 577 (577/577)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 14, extr 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014366)
HIX0014366
HIT000697940 (
ENST00000586087
)
(Ankyrin repeat domain-containing protein 29.)
genome : 21,209,816 - 21,242,847 (33,032)
query : 1 - 583 (583/583)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, cyto_mito 14, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014366)
HIX0014366
HIT000697762 (
ENST00000585908
)
(Ankyrin repeat domain-containing protein 29.)
genome : 21,228,459 - 21,242,736 (14,278)
query : 1 - 762 (762/762)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014366)
HIX0225694
HIT000698641 (
ENST00000586795
)
(Plectin/S10, N-terminal domain containing protein.)
genome : 21,252,217 - 21,252,712 (496)
query : 1 - 496 (496/496)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 5, extr 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225694)
HIX0225276
HIT000021277
(
AK096422
)
(Laminin subunit alpha-3; Epiligrin 170 kDa subunit; E170; Epiligrin subunit alpha; Kalinin subunit alpha; Laminin-5 subunit alpha; Laminin-6 subunit alpha; Laminin-7 subunit alpha; Nicein subunit alpha; Precursor;)
genome : 21,269,407 - 21,417,276 (147,870)
query : 1 - 2,821 (2,821/2,821)
18 exons
identity = 0.999
5'(0.998;1.000;1.000;0.992;1.000;1.000;1.000;
0.992;1.000;1.000;0.977;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002049 : EGF-like, laminin
IPR008211 : Laminin, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 5, pero 5, lyso 5, cyto_mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225276)
HIX0225276
HIT000334594
(
BC093406
)
(Laminin subunit alpha-3; Epiligrin 170 kDa subunit; E170; Epiligrin subunit alpha; Kalinin subunit alpha; Laminin-5 subunit alpha; Laminin-6 subunit alpha; Laminin-7 subunit alpha; Nicein subunit alpha; Precursor;)
genome : 21,269,562 - 21,376,111 (106,550)
query : 1 - 1,814 (1,814/1,829)
13 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.955;0.970;1.000)3'
coverage = 1.000
InterPro :
IPR002049 : EGF-like, laminin
IPR008211 : Laminin, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 4, E.R. 3, mito_pero 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225276)
HIX0225276
HIT000697456 (
ENST00000585600
)
(Laminin, N-terminal domain containing protein.)
genome : 21,269,562 - 21,376,112 (106,551)
query : 1 - 1,815 (1,815/1,815)
13 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.955;0.970;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 5, pero 5, lyso 5, cyto_mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225276)
HIX0225276
HIT000061793
(
AF005258
)
Representative transcript
(Laminin, N-terminal domain containing protein.)
genome : 21,269,747 - 21,441,750 (172,004)
query : 1 - 4,458 (4,458/4,458)
35 exons
identity = 0.983
5'(0.944;1.000;0.992;1.000;0.988;1.000;0.974;
0.983;1.000;0.977;0.955;0.970;1.000;0.957;
0.990;0.981;1.000;1.000;0.994;1.000;0.986;
0.980;0.981;0.963;0.982;0.990;0.993;1.000;
0.979;0.943;0.968;0.971;0.986;1.000;0.993)3'
coverage = 1.000
InterPro :
IPR002049 : EGF-like, laminin
IPR008211 : Laminin, N-terminal
IPR013032 : EGF-like, conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225276)
HIX0137193
pHIT000030833 ( pHIT000030833 )
Representative transcript
(Conserved hypothetical protein.)
genome : 21,289,784 - 21,290,251 (468)
query : 1 - 468 (468/468)
1 exon
InterPro :
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR012678 : Ribosomal protein L23/L15e core domain
IPR013025 : Ribosomal protein L25/L23
IPR019985 : Ribosomal protein L23
GO :
0000166 : Molecular Function : nucleotide binding
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0137193)
CAGE tag :
H27BA04K1304
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : XR_011699
Pan
sp. (Chimpanzee) : XR_021537
HIX0137193
HIT000699885 (
ENST00000588044
)
(Ribosomal protein L25/L23 family protein.)
genome : 21,289,789 - 21,290,251 (463)
query : 1 - 463 (463/463)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11.5, nucl 7.5, extr 5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0137193)
HIX0225276
HIT000093179
(
BC033663
)
(Laminin subunit alpha-3; Epiligrin 170 kDa subunit; E170; Epiligrin subunit alpha; Kalinin subunit alpha; Laminin-5 subunit alpha; Laminin-6 subunit alpha; Laminin-7 subunit alpha; Nicein subunit alpha; Precursor;)
genome : 21,329,376 - 21,376,117 (46,742)
query : 13 - 1,193 (1,181/1,207)
10 exons
identity = 0.990
5'(0.963;1.000;1.000;1.000;1.000;1.000;1.000;
0.955;0.970;1.000)3'
coverage = 0.990
InterPro :
IPR002049 : EGF-like, laminin
IPR008211 : Laminin, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11.5, nucl 8.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225276)
HIX0225276
HIT000703571 (
ENST00000591749
)
(Conserved hypothetical protein.)
genome : 21,407,368 - 21,417,276 (9,909)
query : 1 - 557 (557/557)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 10.1667, cyto 9, nucl 7,
cyto_pero 6.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225276)
HIX0225276
HIT000704337 (
ENST00000592519
)
(Conserved hypothetical protein.)
genome : 21,413,917 - 21,414,801 (885)
query : 1 - 590 (590/590)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto_nucl 5.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225276)
HIX0225276
HIT000193154
(
L34156
)
(Laminin B type IV domain containing protein.)
genome : 21,441,748 - 21,451,622 (9,875)
query : 1 - 435 (435/435)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR000034 : Laminin B type IV
IPR018031 : Laminin B, subgroup
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18, nucl 14.5, cyto 12.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225276)
HIX0225424
HIT000324068
(
X84392
)
Representative transcript
(EGF-like, laminin domain containing protein.)
genome : 21,453,006 - 21,470,008 (17,003)
query : 1 - 511 (511/511)
5 exons
identity = 0.992
5'(0.983;1.000;1.000;1.000;0.971)3'
coverage = 1.000
InterPro :
IPR002049 : EGF-like, laminin
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, extr 6, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225424)
HIX0225692
HIT000698555 (
ENST00000586709
)
(Laminin I domain containing protein.)
genome : 21,478,701 - 21,479,664 (964)
query : 1 - 637 (637/637)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14, nucl 9.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225692)
HIX0225416
HIT000008163
(
AK024889
)
Representative transcript
(Laminin domain II containing protein.)
genome : 21,486,618 - 21,488,498 (1,881)
query : 1 - 1,881 (1,881/1,899)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR010307 : Laminin domain II
GO :
0005604 : Cellular Component : basement membrane
0007155 : Biological Process : cell adhesion
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14, nucl 7, mito 5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225416)
HIX0225403
HIT000700005 (
ENST00000588164
)
(Laminin G domain containing protein.)
genome : 21,508,587 - 21,511,655 (3,069)
query : 1 - 773 (773/773)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto_nucl 8.5, nucl 8, extr 6, E.R._mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225403)
HIX0225403
HIT000704260 (
ENST00000592442
)
(Laminin G domain containing protein.)
genome : 21,511,119 - 21,512,549 (1,431)
query : 1 - 473 (473/473)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 25, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225403)
HIX0225757
HIT000701939 (
ENST00000590104
)
(Conserved hypothetical protein.)
genome : 21,526,148 - 21,526,801 (654)
query : 1 - 462 (462/462)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11.5, extr 5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225757)
HIX0225718
HIT000699845 (
ENST00000588004
)
(Laminin G domain containing protein.)
genome : 21,529,857 - 21,534,763 (4,907)
query : 1 - 554 (554/554)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, extr 9, cyto 5, mito 5, cyto_mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225718)
HIX0225590
HIT000694194 (
ENST00000582300
)
(Hypothetical short protein.)
genome : 21,538,060 - 21,562,520 (24,461)
query : 1 - 719 (719/719)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225590)
HIX0225507
HIT000691637 (
ENST00000579713
)
(Hypothetical short protein.)
genome : 21,574,177 - 21,595,303 (21,127)
query : 1 - 817 (817/817)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225507)
HIX0225295
HIT000722926 (
NM_001243425
)
(Conserved hypothetical protein.)
genome : 21,594,384 - 21,600,262 (5,879)
query : 1 - 1,058 (1,058/1,073)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 14.5, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225295)
HIX0225295
HIT000089085
(
BC016833
)
(Conserved hypothetical protein.)
genome : 21,594,384 - 21,600,252 (5,869)
query : 1 - 1,048 (1,048/1,065)
2 exons
identity = 0.999
5'(0.998;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 14.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225295)
HIX0225295
HIT000696122 (
ENST00000584250
)
(Conserved hypothetical protein.)
genome : 21,594,384 - 21,600,252 (5,869)
query : 1 - 1,048 (1,048/1,048)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 14.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225295)
HIX0225295
HIT000081910
(
AK074875
)
Representative transcript
(Conserved hypothetical protein.)
genome : 21,594,763 - 21,600,251 (5,489)
query : 2 - 669 (668/669)
2 exons
identity = 0.999
5'(1.000;0.998)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 14.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225295)
HIX0225295
HIT000690096 (
ENST00000578150
)
(Outer membrane protein Iml2/Tetratricopeptide repeat protein 39 family protein.)
genome : 21,594,877 - 21,660,743 (65,867)
query : 1 - 499 (499/499)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 14.5, cyto_nucl 8, E.R._mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225295)
HIX0225295
HIT000689141 (
ENST00000577185
)
(Conserved hypothetical protein.)
genome : 21,596,598 - 21,600,249 (3,652)
query : 1 - 533 (533/533)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 6, cyto 5.5, cyto_nucl 5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225295)
HIX0019624
HIT000035612
(
BC012036
)
Representative transcript
(Conserved hypothetical protein.)
genome : 21,624,139 - 21,625,234 (1,096)
query : 1 - 1,064 (1,064/1,082)
2 exons
identity = 0.978
5'(1.000;0.977)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 9, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019624)
HIX0225470
HIT000690386 (
ENST00000578443
)
(Hypothetical short protein.)
genome : 21,656,758 - 21,679,284 (22,527)
query : 1 - 564 (564/564)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225470)
HIX0225316
HIT000639963 (
ENST00000540918
)
(Outer membrane protein Iml2/Tetratricopeptide repeat protein 39 family protein.)
genome : 21,693,317 - 21,715,574 (22,258)
query : 1 - 4,117 (4,117/4,117)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, cyto_mito 6.5, mito 6, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225316)
HIX0225316
HIT000491066
(
AK296442
)
Representative transcript
(Outer membrane protein Iml2/Tetratricopeptide repeat protein 39 family protein.)
genome : 21,693,317 - 21,713,123 (19,807)
query : 1 - 1,666 (1,666/1,666)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;0.991;1.000;1.000;0.990;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR019412 : Outer membrane protein Iml2/Tetratricopeptide repeat protein 39
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, cyto_mito 5.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225316)
HIX0225628
HIT000695660 (
ENST00000583782
)
(Hypothetical short protein.)
genome : 21,693,601 - 21,694,098 (498)
query : 10 - 507 (498/507)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.982
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 10.5, extr 10, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225628)
HIX0225316
HIT000691144 (
ENST00000579214
)
(Outer membrane protein Iml2/Tetratricopeptide repeat protein 39 family protein.)
genome : 21,694,237 - 21,703,901 (9,665)
query : 1 - 389 (389/389)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11.5, cyto_nucl 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225316)
HIX0225316
HIT000693300 (
ENST00000581394
)
(Outer membrane protein Iml2/Tetratricopeptide repeat protein 39 family protein.)
genome : 21,694,304 - 21,694,996 (693)
query : 1 - 510 (510/510)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225316)
HIX0225316
HIT000696293 (
ENST00000584424
)
(Outer membrane protein Iml2/Tetratricopeptide repeat protein 39 family protein.)
genome : 21,703,560 - 21,712,473 (8,914)
query : 1 - 739 (739/739)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 8, cyto_pero 8, cyto_golg 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225316)
HIX0225316
HIT000695970 (
ENST00000584095
)
(Outer membrane protein Iml2/Tetratricopeptide repeat protein 39 family protein.)
genome : 21,703,591 - 21,705,626 (2,036)
query : 1 - 553 (553/553)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225316)
HIX0225521
HIT000691876 (
ENST00000579956
)
(Dimerization-anchoring domain of cAMP-dependent protein kinase, regulatory subunit containing protein.)
genome : 21,719,026 - 21,732,690 (13,665)
query : 1 - 443 (443/443)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 6, nucl 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225521)
HIX0225296
HIT000650037
(
HM594169
)
(Calcium-binding tyrosine phosphorylation-regulated protein isoform e.)
genome : 21,735,982 - 21,741,517 (5,536)
query : 2 - 188 (187/189)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.989
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 12.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225296)
HIX0225296
HIT000650035
(
HM594167
)
(Calcium-binding tyrosine phosphorylation-regulated protein isoform d.)
genome : 21,735,982 - 21,741,517 (5,536)
query : 1 - 661 (661/661)
3 exons
identity = 0.997
5'(1.000;0.997;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 12, mito 6, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225296)
HIX0225296
HIT000650031
(
HM594163
)
(Conserved hypothetical protein.)
genome : 21,735,982 - 21,736,740 (759)
query : 1 - 759 (759/759)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 11, cyto 11, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225296)
HIX0225296
HIT000694124 (
ENST00000582229
)
(Conserved hypothetical protein.)
genome : 21,736,068 - 21,741,546 (5,479)
query : 1 - 1,090 (1,090/1,090)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 10.5, extr 10, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225296)
HIX0225296
HIT000083105
(
AY007205
)
Representative transcript
(Calcium-binding tyrosine phosphorylation-regulated protein; Calcium-binding protein 86; Cancer/testis antigen 88; CT88; Fibrousheathin II; Fibrousheathin-2; FSP-2; Testis-specific calcium-binding protein CBP86;)
genome : 21,736,069 - 21,741,546 (5,478)
query : 1 - 1,089 (1,089/1,089)
3 exons
identity = 0.999
5'(0.999;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 10.5, extr 10, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225296)
HIX0225258
HIT000695148 (
ENST00000583267
)
(Conserved hypothetical protein.)
genome : 21,739,473 - 21,742,175 (2,703)
query : 1 - 735 (735/735)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 10.5, cyto_nucl 10, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225258)
HIX0225258
HIT000260880
(
BC063420
)
(Oxysterol-binding protein family protein.)
genome : 21,742,017 - 21,851,882 (109,866)
query : 1 - 2,995 (2,995/3,080)
14 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;0.991;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000648 : Oxysterol-binding protein
IPR018494 : Oxysterol-binding protein, conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.8333, cyto 15.5, nucl 14,
cyto_plas 8.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225258)
HIX0225258
HIT000086719
(
BC007004
)
(Oxysterol-binding protein family protein.)
genome : 21,742,012 - 21,745,107 (3,096)
query : 1 - 1,312 (1,312/1,340)
2 exons
identity = 0.998
3'(0.998;1.000)5'
coverage = 1.000
InterPro :
IPR000648 : Oxysterol-binding protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 11, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225258)
HIX0225258
HIT000090569
(
BC022293
)
(Oxysterol-binding protein family protein.)
genome : 21,742,019 - 21,746,669 (4,651)
query : 7 - 1,450 (1,444/1,481)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 0.994
InterPro :
IPR000648 : Oxysterol-binding protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 14, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225258)
HIX0225258
HIT000075886
(
AF274714
)
Representative transcript
(Oxysterol-binding protein family protein.)
genome : 21,742,012 - 21,852,196 (110,185)
query : 1 - 3,314 (3,314/3,337)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000648 : Oxysterol-binding protein
IPR018494 : Oxysterol-binding protein, conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.8333, cyto 15.5, nucl 14,
cyto_plas 8.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225258)
HIX0225258
HIT000206869 (
NM_018030
)
(Oxysterol-binding protein family protein.)
genome : 21,742,012 - 21,852,196 (110,185)
query : 1 - 3,314 (3,314/3,337)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.8333, cyto 15.5, nucl 14,
cyto_plas 8.66667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225258)
HIX0225258
HIT000335938
(
BC098384
)
(Oxysterol-binding protein family protein.)
genome : 21,742,018 - 21,851,875 (109,858)
query : 1 - 2,985 (2,985/3,003)
14 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000648 : Oxysterol-binding protein
IPR018494 : Oxysterol-binding protein, conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.8333, cyto 15.5, nucl 14,
cyto_plas 8.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225258)
HIX0225258
HIT000482513 (
ENST00000399443
)
(Oxysterol-binding protein family protein.)
genome : 21,742,009 - 21,852,196 (110,188)
query : 1 - 3,317 (3,317/3,317)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.8333, cyto 15.5, nucl 14,
cyto_plas 8.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225258)
HIX0225258
HIT000078854
(
AF392449
)
(Oxysterol-binding protein family protein.)
genome : 21,742,017 - 21,851,817 (109,801)
query : 1 - 2,930 (2,930/2,930)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;0.983;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000648 : Oxysterol-binding protein
IPR018494 : Oxysterol-binding protein, conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, mito 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225258)
HIX0225258
HIT000265079
(
BC073854
)
(Oxysterol-binding protein family protein.)
genome : 21,743,050 - 21,805,143 (62,094)
query : 1 - 1,483 (1,483/1,497)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;0.991;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000648 : Oxysterol-binding protein
IPR018494 : Oxysterol-binding protein, conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225258)
HIX0225258
HIT000689960 (
ENST00000578013
)
(Oxysterol-binding protein family protein.)
genome : 21,743,121 - 21,759,799 (16,679)
query : 1 - 880 (880/880)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13, nucl 7, extr 5, mito 3,
extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225258)
HIX0225258
HIT000433418
(
AK314552
)
(Oxysterol-binding protein family protein.)
genome : 21,743,143 - 21,851,647 (108,505)
query : 1 - 1,634 (1,634/1,634)
14 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.992;1.000;0.991;
1.000;0.990;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000648 : Oxysterol-binding protein
IPR018494 : Oxysterol-binding protein, conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15.8333, nucl 13,
cyto_plas 9.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225258)
HIX0225258
HIT000003553
(
AK001079
)
(Conserved hypothetical protein.)
genome : 21,750,339 - 21,851,721 (101,383)
query : 3 - 1,228 (1,226/1,228)
10 exons
identity = 0.993
3'(1.000;0.989;0.991;1.000;1.000;1.000;1.000;
1.000;1.000;0.949)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 12, mito 8, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225258)
HIX0225258
HIT000690002 (
ENST00000578055
)
(Oxysterol-binding protein family protein.)
genome : 21,752,339 - 21,851,649 (99,311)
query : 1 - 569 (569/587)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.969
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 7, cyto_nucl 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225258)
HIX0225258
HIT000697105 (
ENST00000585247
)
(Oxysterol-binding protein family protein.)
genome : 21,775,999 - 21,851,575 (75,577)
query : 1 - 580 (580/580)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 8, cyto_nucl 7.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225258)
HIX0039789
HIT000005172
(
AK021898
)
Representative transcript
(Conserved hypothetical protein.)
genome : 21,809,722 - 21,811,488 (1,767)
query : 1 - 1,767 (1,767/1,793)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 0.985
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, extr_plas 13.5, mito 7, plas 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039789)
HIX0225553
HIT000692953 (
ENST00000581043
)
(Conserved hypothetical protein.)
genome : 21,860,806 - 21,891,496 (30,691)
query : 1 - 631 (631/631)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8, mito 8, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225553)
HIX0137177
HIT000474296 (
ENST00000390762
)
(Non-protein coding transcript.)
genome : 21,901,650 - 21,901,699 (50)
query : 1 - 50 (50/50)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0137177)
HIX0137177
HIT000658636 (
NR_031724
)
(Non-protein coding transcript.)
genome : 21,901,650 - 21,901,699 (50)
query : 1 - 50 (50/50)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0137177)
HIX0225288
HIT000691688 (
ENST00000579764
)
(Conserved hypothetical protein.)
genome : 21,927,622 - 21,977,752 (50,131)
query : 1 - 438 (438/438)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225288)
HIX0225288
HIT000694244 (
ENST00000582350
)
(Ankyrin repeat-containing domain containing protein.)
genome : 21,927,629 - 21,977,748 (50,120)
query : 1 - 588 (588/588)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225288)
HIX0225288
HIT000052562
(
BC041563
)
Representative transcript
(Ankyrin repeat-containing domain containing protein.)
genome : 21,937,089 - 21,977,752 (40,664)
query : 1 - 1,887 (1,887/1,908)
5 exons
identity = 0.999
3'(1.000;0.987;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225288)
HIX0225288
HIT000482511 (
ENST00000399441
)
(Ankyrin repeat-containing domain containing protein.)
genome : 21,937,089 - 21,977,752 (40,664)
query : 1 - 1,887 (1,887/1,887)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225288)
HIX0225496
HIT000691276 (
ENST00000579347
)
(Conserved hypothetical protein.)
genome : 21,944,751 - 21,947,948 (3,198)
query : 1 - 567 (567/567)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225496)
HIX0225288
HIT000694508 (
ENST00000582618
)
(Ankyrin repeat-containing domain containing protein.)
genome : 21,946,369 - 21,977,805 (31,437)
query : 1 - 1,002 (1,002/1,002)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 15, cyto 9, mito_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225288)
HIX0225288
HIT000693249 (
ENST00000581343
)
(Ankyrin repeat-containing domain containing protein.)
genome : 21,947,898 - 21,957,502 (9,605)
query : 1 - 565 (565/565)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225288)
HIX0174238
HIT000494322
(
AK299698
)
Representative transcript
(Conserved hypothetical protein.)
genome : 21,977,240 - 21,981,171 (3,932)
query : 1 - 1,470 (1,470/1,470)
2 exons
identity = 0.993
5'(0.996;0.963)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174238)
Ortholog candidate ( ->
Evola
)
Canis
sp. (Dog) : XM_850752
HIX0202670
HIT000112457 (
ENST00000284202
)
(Impact family protein.)
genome : 22,006,580 - 22,033,499 (26,920)
query : 1 - 3,792 (3,792/3,792)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cysk 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202670)
HIX0202670
HIT000207241 (
NM_018439
)
(Impact family protein.)
genome : 22,006,609 - 22,033,495 (26,887)
query : 1 - 3,759 (3,759/3,764)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.992;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cysk 5, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202670)
HIX0202670
HIT000425330
(
AK292533
)
(Protein IMPACT; Imprinted and ancient gene protein homolog;)
genome : 22,006,609 - 22,031,238 (24,630)
query : 1 - 1,502 (1,502/1,502)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.992;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001498 : Impact, N-terminal
IPR006575 : RWD domain
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
IPR020568 : Ribosomal protein S5 domain 2-type fold
IPR020569 : Uncharacterised protein family UPF0029, Impact, conserved site
IPR023582 : Impact family
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cysk 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202670)
HIX0202670
HIT000094246
(
BC036074
)
(Protein IMPACT.)
genome : 22,006,611 - 22,031,556 (24,946)
query : 1 - 2,943 (2,943/3,007)
10 exons
identity = 0.998
5'(0.997;1.000;0.984;1.000;0.992;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001498 : Impact, N-terminal
IPR020568 : Ribosomal protein S5 domain 2-type fold
IPR020569 : Uncharacterised protein family UPF0029, Impact, conserved site
IPR023582 : Impact family
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, extr 5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202670)
HIX0202670
HIT000692616 (
ENST00000580706
)
(Impact family protein.)
genome : 22,006,611 - 22,031,560 (24,950)
query : 1 - 2,948 (2,948/2,948)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202670)
HIX0202670
HIT000431593
(
AK312727
)
(Protein IMPACT.)
genome : 22,006,635 - 22,030,811 (24,177)
query : 2 - 1,051 (1,050/1,051)
11 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.992;1.000;
1.000;1.000;1.000;0.986)3'
coverage = 0.999
InterPro :
IPR001498 : Impact, N-terminal
IPR006575 : RWD domain
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
IPR020568 : Ribosomal protein S5 domain 2-type fold
IPR020569 : Uncharacterised protein family UPF0029, Impact, conserved site
IPR023582 : Impact family
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cysk 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202670)
HIX0202670
HIT000042040
(
BC034016
)
(Protein IMPACT; Imprinted and ancient gene protein homolog;)
genome : 22,006,661 - 22,031,556 (24,896)
query : 1 - 1,768 (1,768/1,797)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.992;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001498 : Impact, N-terminal
IPR006575 : RWD domain
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
IPR020568 : Ribosomal protein S5 domain 2-type fold
IPR020569 : Uncharacterised protein family UPF0029, Impact, conserved site
IPR023582 : Impact family
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cysk 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202670)
HIX0202670
HIT000696926 (
ENST00000585067
)
(Impact family protein.)
genome : 22,006,663 - 22,023,118 (16,456)
query : 1 - 605 (605/605)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202670)
HIX0202670
HIT000058852
(
AB026264
)
(Protein IMPACT; Imprinted and ancient gene protein homolog;)
genome : 22,006,682 - 22,033,492 (26,811)
query : 1 - 3,680 (3,680/3,683)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.992;1.000;
1.000;1.000;1.000;0.999)3'
coverage = 0.999
InterPro :
IPR001498 : Impact, N-terminal
IPR006575 : RWD domain
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
IPR020568 : Ribosomal protein S5 domain 2-type fold
IPR020569 : Uncharacterised protein family UPF0029, Impact, conserved site
IPR023582 : Impact family
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cysk 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202670)
HIX0202670
HIT000690167 (
ENST00000578221
)
(Impact family protein.)
genome : 22,006,706 - 22,023,083 (16,378)
query : 1 - 570 (570/570)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13, cysk 5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202670)
HIX0202670
HIT000073936
(
AF208694
)
Representative transcript
(Protein IMPACT; Imprinted and ancient gene protein homolog;)
genome : 22,006,721 - 22,031,250 (24,530)
query : 1 - 1,402 (1,402/1,402)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;0.984;0.988;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001498 : Impact, N-terminal
IPR006575 : RWD domain
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
IPR020568 : Ribosomal protein S5 domain 2-type fold
IPR020569 : Uncharacterised protein family UPF0029, Impact, conserved site
IPR023582 : Impact family
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cysk 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202670)
HIX0225489
HIT000690984 (
ENST00000579049
)
(Conserved hypothetical protein.)
genome : 22,015,328 - 22,019,602 (4,275)
query : 1 - 281 (281/281)
2 exons
identity = 0.996
3'(1.000;0.990)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 11, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225489)
HIX0202670
HIT000693185 (
ENST00000581278
)
(Impact family protein.)
genome : 22,028,103 - 22,033,495 (5,393)
query : 1 - 598 (598/598)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 15, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202670)
HIX0202670
HIT000691955 (
ENST00000580035
)
(Conserved hypothetical protein.)
genome : 22,030,757 - 22,033,493 (2,737)
query : 1 - 520 (520/520)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202670)
HIX0039701
HIT000077033
(
AF312230
)
Representative transcript
(Histamine H4 receptor; H4R; HH4R; AXOR35; G-protein coupled receptor 105; GPRv53; Pfi-013; SP9144;)
genome : 22,040,593 - 22,059,921 (19,329)
query : 1 - 3,671 (3,671/3,689)
3 exons
identity = 0.998
5'(1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR008102 : Histamine H4 receptor
GO :
0004969 : Molecular Function : histamine receptor activity
0006954 : Biological Process : inflammatory response
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007204 : Biological Process : positive regulation of cytosolic calcium ion concentration
0016021 : Cellular Component : integral component of membrane
0043408 : Biological Process : regulation of MAPK cascade
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039701)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB189711
Rattus
sp. (Rat) : AF358860
Equus
sp. (Horse) : DQ681354
Oryzias
sp. (Medaka) : ENSORLT00000021193
Pongo
sp. (Orangutan) : ENSPPYT00000010588
Mus
sp. (Mouse) : EU660534
Tetraodon
sp. (Tetraodon) : GSTENT00028340001
Gallus
sp. (Chicken) : XM_001232310
Bos
sp. (Cow) : XM_001251983
Monodelphis
sp. (Opossum) : XM_001365065
Pan
sp. (Chimpanzee) : XM_523890
Canis
sp. (Dog) : XM_547634
HIX0039701
HIT000208369 (
NM_021624
)
(Histamine H4 receptor; H4R; HH4R; AXOR35; G-protein coupled receptor 105; GPRv53; Pfi-013; SP9144;)
genome : 22,040,593 - 22,059,921 (19,329)
query : 1 - 3,668 (3,668/3,686)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039701)
HIX0039701
HIT000560860 (
NM_001143828
)
(Histamine H4 receptor; H4R; HH4R; AXOR35; G-protein coupled receptor 105; GPRv53; Pfi-013; SP9144;)
genome : 22,040,593 - 22,059,921 (19,329)
query : 1 - 3,404 (3,404/3,422)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, extr 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039701)
HIX0039701
HIT000561862 (
NM_001160166
)
(Histamine H4 receptor; H4R; HH4R; AXOR35; G-protein coupled receptor 105; GPRv53; Pfi-013; SP9144;)
genome : 22,040,593 - 22,059,921 (19,329)
query : 1 - 3,504 (3,504/3,522)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039701)
HIX0039701
HIT000107017 (
ENST00000256906
)
(Histamine H4 receptor; H4R; HH4R; AXOR35; G-protein coupled receptor 105; GPRv53; Pfi-013; SP9144;)
genome : 22,040,593 - 22,059,921 (19,329)
query : 1 - 3,668 (3,668/3,668)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039701)
HIX0039701
HIT000263308
(
BC069136
)
(Histamine H4 receptor; H4R; HH4R; AXOR35; G-protein coupled receptor 105; GPRv53; Pfi-013; SP9144;)
genome : 22,040,593 - 22,057,569 (16,977)
query : 1 - 1,316 (1,316/1,316)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008102 : Histamine H4 receptor
GO :
0004969 : Molecular Function : histamine receptor activity
0006954 : Biological Process : inflammatory response
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007204 : Biological Process : positive regulation of cytosolic calcium ion concentration
0016021 : Cellular Component : integral component of membrane
0043408 : Biological Process : regulation of MAPK cascade
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039701)
HIX0039701
HIT000059444
(
AB045370
)
(Histamine H4 receptor; H4R; HH4R; AXOR35; G-protein coupled receptor 105; GPRv53; Pfi-013; SP9144;)
genome : 22,040,630 - 22,057,602 (16,973)
query : 1 - 1,312 (1,312/1,312)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008102 : Histamine H4 receptor
GO :
0004969 : Molecular Function : histamine receptor activity
0006954 : Biological Process : inflammatory response
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007204 : Biological Process : positive regulation of cytosolic calcium ion concentration
0016021 : Cellular Component : integral component of membrane
0043408 : Biological Process : regulation of MAPK cascade
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039701)
HIX0039701
HIT000340467
(
BC112348
)
(Histamine H4 receptor; H4R; HH4R; AXOR35; G-protein coupled receptor 105; GPRv53; Pfi-013; SP9144;)
genome : 22,040,633 - 22,058,140 (17,508)
query : 1 - 1,847 (1,847/1,847)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR008102 : Histamine H4 receptor
GO :
0004969 : Molecular Function : histamine receptor activity
0006954 : Biological Process : inflammatory response
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007204 : Biological Process : positive regulation of cytosolic calcium ion concentration
0016021 : Cellular Component : integral component of membrane
0043408 : Biological Process : regulation of MAPK cascade
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039701)
HIX0039701
HIT000059429
(
AB044934
)
(Histamine H4 receptor; H4R; HH4R; AXOR35; G-protein coupled receptor 105; GPRv53; Pfi-013; SP9144;)
genome : 22,040,639 - 22,057,564 (16,926)
query : 1 - 1,265 (1,265/1,265)
3 exons
identity = 0.998
5'(1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR008102 : Histamine H4 receptor
GO :
0004969 : Molecular Function : histamine receptor activity
0006954 : Biological Process : inflammatory response
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007204 : Biological Process : positive regulation of cytosolic calcium ion concentration
0016021 : Cellular Component : integral component of membrane
0043408 : Biological Process : regulation of MAPK cascade
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039701)
HIX0039701
HIT000076906
(
AF307973
)
(Histamine H4 receptor; H4R; HH4R; AXOR35; G-protein coupled receptor 105; GPRv53; Pfi-013; SP9144;)
genome : 22,040,693 - 22,057,526 (16,834)
query : 1 - 1,173 (1,173/1,173)
3 exons
identity = 0.997
5'(1.000;1.000;0.995)3'
coverage = 1.000
InterPro :
IPR008102 : Histamine H4 receptor
GO :
0004969 : Molecular Function : histamine receptor activity
0006954 : Biological Process : inflammatory response
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007204 : Biological Process : positive regulation of cytosolic calcium ion concentration
0016021 : Cellular Component : integral component of membrane
0043408 : Biological Process : regulation of MAPK cascade
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039701)
HIX0039701
HIT000077475
(
AF325356
)
(Histamine H4 receptor; H4R; HH4R; AXOR35; G-protein coupled receptor 105; GPRv53; Pfi-013; SP9144;)
genome : 22,040,693 - 22,057,526 (16,834)
query : 1 - 1,173 (1,173/1,173)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008102 : Histamine H4 receptor
GO :
0004969 : Molecular Function : histamine receptor activity
0006954 : Biological Process : inflammatory response
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007204 : Biological Process : positive regulation of cytosolic calcium ion concentration
0016021 : Cellular Component : integral component of membrane
0043408 : Biological Process : regulation of MAPK cascade
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039701)
HIX0039701
HIT000077602
(
AF329449
)
(Histamine H4 receptor; H4R; HH4R; AXOR35; G-protein coupled receptor 105; GPRv53; Pfi-013; SP9144;)
genome : 22,040,693 - 22,057,526 (16,834)
query : 1 - 1,173 (1,173/1,173)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008102 : Histamine H4 receptor
GO :
0004969 : Molecular Function : histamine receptor activity
0006954 : Biological Process : inflammatory response
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007204 : Biological Process : positive regulation of cytosolic calcium ion concentration
0016021 : Cellular Component : integral component of membrane
0043408 : Biological Process : regulation of MAPK cascade
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039701)
HIX0039701
HIT000083130
(
AY008280
)
(Histamine H4 receptor; H4R; HH4R; AXOR35; G-protein coupled receptor 105; GPRv53; Pfi-013; SP9144;)
genome : 22,040,693 - 22,057,526 (16,834)
query : 1 - 1,173 (1,173/1,173)
3 exons
identity = 0.999
5'(0.995;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008102 : Histamine H4 receptor
GO :
0004969 : Molecular Function : histamine receptor activity
0006954 : Biological Process : inflammatory response
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007204 : Biological Process : positive regulation of cytosolic calcium ion concentration
0016021 : Cellular Component : integral component of membrane
0043408 : Biological Process : regulation of MAPK cascade
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039701)
HIX0039701
HIT000084677
(
AY136745
)
(Histamine H4 receptor; H4R; HH4R; AXOR35; G-protein coupled receptor 105; GPRv53; Pfi-013; SP9144;)
genome : 22,040,693 - 22,057,526 (16,834)
query : 1 - 1,173 (1,173/1,173)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008102 : Histamine H4 receptor
GO :
0004969 : Molecular Function : histamine receptor activity
0006954 : Biological Process : inflammatory response
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007204 : Biological Process : positive regulation of cytosolic calcium ion concentration
0016021 : Cellular Component : integral component of membrane
0043408 : Biological Process : regulation of MAPK cascade
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039701)
HIX0039701
HIT000246783
(
AJ298292
)
(Histamine H4 receptor; H4R; HH4R; AXOR35; G-protein coupled receptor 105; GPRv53; Pfi-013; SP9144;)
genome : 22,040,693 - 22,057,526 (16,834)
query : 1 - 1,173 (1,173/1,173)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008102 : Histamine H4 receptor
GO :
0004969 : Molecular Function : histamine receptor activity
0006954 : Biological Process : inflammatory response
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007204 : Biological Process : positive regulation of cytosolic calcium ion concentration
0016021 : Cellular Component : integral component of membrane
0043408 : Biological Process : regulation of MAPK cascade
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039701)
HIX0039701
HIT000468595
(
DQ835186
)
(Histamine H4 receptor; H4R; HH4R; AXOR35; G-protein coupled receptor 105; GPRv53; Pfi-013; SP9144;)
genome : 22,040,693 - 22,057,526 (16,834)
query : 1 - 909 (909/909)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008102 : Histamine H4 receptor
GO :
0004969 : Molecular Function : histamine receptor activity
0006954 : Biological Process : inflammatory response
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007204 : Biological Process : positive regulation of cytosolic calcium ion concentration
0016021 : Cellular Component : integral component of membrane
0043408 : Biological Process : regulation of MAPK cascade
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039701)
HIX0039701
HIT000524814 (
ENST00000426880
)
(Histamine H4 receptor; H4R; HH4R; AXOR35; G-protein coupled receptor 105; GPRv53; Pfi-013; SP9144;)
genome : 22,040,693 - 22,057,526 (16,834)
query : 1 - 909 (909/909)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039701)
HIX0039701
HIT000468596
(
DQ835187
)
(Histamine H4 receptor isoform 3.)
genome : 22,040,693 - 22,040,895 (203)
query : 1 - 203 (203/204)
1 exon
identity = 0.985
5'(0.985)3'
coverage = 0.995
InterPro :
IPR008102 : Histamine H4 receptor
GO :
0004969 : Molecular Function : histamine receptor activity
0006954 : Biological Process : inflammatory response
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007204 : Biological Process : positive regulation of cytosolic calcium ion concentration
0016021 : Cellular Component : integral component of membrane
0043408 : Biological Process : regulation of MAPK cascade
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039701)
HIX0225612
HIT000695003 (
ENST00000583122
)
(Hypothetical protein.)
genome : 22,070,610 - 22,071,044 (435)
query : 25 - 459 (435/459)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.948
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 13.5, extr 9, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225612)
HIX0225562
HIT000693551 (
ENST00000581648
)
(Conserved hypothetical protein.)
genome : 22,096,847 - 22,097,970 (1,124)
query : 1 - 543 (543/543)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225562)
HIX0225472
HIT000690441 (
ENST00000578499
)
(Helicase, C-terminal domain containing protein.)
genome : 22,102,237 - 22,102,883 (647)
query : 1 - 647 (647/647)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, cyto_mito 13.6667, cyto_pero 3.83333,
nucl 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225472)
HIX0027385
HIT000044222
(
AK124349
)
Representative transcript
(Conserved hypothetical protein.)
genome : 22,208,146 - 22,242,162 (34,017)
query : 1 - 2,321 (2,321/2,321)
3 exons
identity = 1.000
5'(1.000;0.997;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027385)
HIX0027385
HIT000689943 (
ENST00000577994
)
(Hypothetical short protein.)
genome : 22,208,146 - 22,242,162 (34,017)
query : 1 - 2,321 (2,321/2,321)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027385)
HIX0027385
HIT000726094 (
NR_040033
)
(Hypothetical short protein.)
genome : 22,208,146 - 22,242,162 (34,017)
query : 1 - 2,321 (2,321/2,321)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027385)
HIX0027385
HIT000695439 (
ENST00000583558
)
(Hypothetical short protein.)
genome : 22,236,957 - 22,240,369 (3,413)
query : 1 - 596 (596/596)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 8, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027385)
HIX0225471
HIT000690432 (
ENST00000578490
)
(Hypothetical short protein.)
genome : 22,253,127 - 22,254,312 (1,186)
query : 1 - 577 (577/577)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 10, extr 6, cyto_nucl 6, cyto_pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225471)
HIX0225474
HIT000690477 (
ENST00000578535
)
(Small GTPase superfamily protein.)
genome : 22,265,736 - 22,266,315 (580)
query : 1 - 580 (580/580)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 5, cyto 5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225474)
HIX0225504
HIT000691498 (
ENST00000579571
)
(Conserved hypothetical protein.)
genome : 22,269,878 - 22,270,125 (248)
query : 1 - 248 (248/248)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225504)
HIX0225332
HIT000689308 (
ENST00000577354
)
(Hypothetical short protein.)
genome : 22,305,745 - 22,346,609 (40,865)
query : 1 - 472 (472/472)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225332)
HIX0225332
HIT000694540 (
ENST00000582650
)
(Hypothetical short protein.)
genome : 22,305,817 - 22,509,040 (203,224)
query : 1 - 592 (592/592)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15.5, cyto 9.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225332)
HIX0225332
HIT000695672 (
ENST00000583794
)
(Conserved hypothetical protein.)
genome : 22,305,908 - 22,324,842 (18,935)
query : 1 - 223 (223/223)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225332)
HIX0225364
HIT000692894 (
ENST00000580984
)
(Hypothetical short protein.)
genome : 22,513,451 - 22,567,646 (54,196)
query : 1 - 487 (487/487)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225364)
HIX0225364
HIT000694587 (
ENST00000582697
)
(Hypothetical short protein.)
genome : 22,534,171 - 22,567,629 (33,459)
query : 1 - 386 (386/386)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225364)
HIX0174267
HIT000525539 (
ENST00000427605
)
(GRAM domain containing protein.)
genome : 22,596,398 - 22,597,168 (771)
query : 1 - 771 (771/771)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15, nucl 10.5, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174267)
HIX0014365
HIT000132116 (
ENST00000339486
)
(Serine/threonine-protein kinase RIO3; EC=2.7.11.1; RIO kinase 3; sudD homolog;)
genome : 21,032,787 - 21,063,104 (30,318)
query : 1 - 4,038 (4,038/4,038)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 16.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014365)
HIX0014365
HIT000200625 (
NM_003831
)
(Serine/threonine-protein kinase RIO3; EC=2.7.11.1; RIO kinase 3; sudD homolog;)
genome : 21,032,787 - 21,063,101 (30,315)
query : 1 - 4,035 (4,035/4,035)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 16.5, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014365)
HIX0014365
HIT000013906
(
AK057292
)
Representative transcript
(Serine/threonine-protein kinase RIO3; EC=2.7.11.1; RIO kinase 3; sudD homolog;)
genome : 21,032,787 - 21,061,446 (28,660)
query : 1 - 2,380 (2,380/2,380)
13 exons
identity = 1.000
5'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000687 : RIO kinase
IPR018934 : RIO domain
IPR018935 : RIO kinase, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 16.5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014365)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK147074
Bos
sp. (Cow) : BC114721
Gallus
sp. (Chicken) : CR353168
Tetraodon
sp. (Tetraodon) : CR726147
Pongo
sp. (Orangutan) : CR858252
Equus
sp. (Horse) : ENSECAT00000009551
Oryzias
sp. (Medaka) : ENSORLT00000004222
Rattus
sp. (Rat) : ENSRNOT00000039377
Takifugu
sp. (Fugu) : SINFRUT00000131813
Macaca
sp. (Macaque) : XM_001093347
Monodelphis
sp. (Opossum) : XM_001362834
Pan
sp. (Chimpanzee) : XM_523888
Canis
sp. (Dog) : XM_850695
HIX0014365
HIT000091577
(
BC028360
)
(Serine/threonine-protein kinase RIO3; EC=2.7.11.1; RIO kinase 3; sudD homolog;)
genome : 21,033,256 - 21,062,478 (29,223)
query : 6 - 3,040 (3,035/3,055)
12 exons
identity = 1.000
5'(1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000687 : RIO kinase
IPR018934 : RIO domain
IPR018935 : RIO kinase, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 14.5, nucl 3, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014365)
HIX0014365
HIT000498562
(
AK303938
)
(Serine/threonine-protein kinase RIO3; EC=2.7.11.1; RIO kinase 3; sudD homolog;)
genome : 21,033,251 - 21,061,544 (28,294)
query : 1 - 1,966 (1,966/1,966)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000687 : RIO kinase
IPR018934 : RIO domain
IPR018935 : RIO kinase, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 16.5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014365)
HIX0014365
HIT000693488 (
ENST00000581585
)
(Serine/threonine-protein kinase RIO3; EC=2.7.11.1; RIO kinase 3; sudD homolog;)
genome : 21,033,251 - 21,061,544 (28,294)
query : 1 - 1,966 (1,966/1,966)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 16.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014365)
HIX0014365
HIT000693208 (
ENST00000581302
)
(Serine/threonine-protein kinase RIO3; EC=2.7.11.1; RIO kinase 3; sudD homolog;)
genome : 21,033,256 - 21,062,478 (29,223)
query : 1 - 3,035 (3,035/3,049)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 14.5, nucl 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014365)
HIX0014365
HIT000052240
(
BC039729
)
(Serine/threonine-protein kinase RIO3; EC=2.7.11.1; RIO kinase 3; sudD homolog;)
genome : 21,033,272 - 21,061,447 (28,176)
query : 1 - 1,887 (1,887/2,000)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000687 : RIO kinase
IPR018934 : RIO domain
IPR018935 : RIO kinase, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 16.5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014365)
HIX0014365
HIT000689454 (
ENST00000577501
)
(Serine/threonine-protein kinase RIO3; EC=2.7.11.1; RIO kinase 3; sudD homolog;)
genome : 21,033,272 - 21,061,464 (28,193)
query : 1 - 1,904 (1,904/1,904)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 16.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014365)
HIX0014365
HIT000062263
(
AF013591
)
(Serine/threonine-protein kinase RIO3; EC=2.7.11.1; RIO kinase 3; sudD homolog;)
genome : 21,033,325 - 21,062,432 (29,108)
query : 15 - 2,842 (2,828/2,856)
13 exons
identity = 0.999
5'(0.993;1.000;1.000;1.000;1.000;1.000;1.000;
0.990;1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.990
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000687 : RIO kinase
IPR018934 : RIO domain
IPR018935 : RIO kinase, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 16.5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014365)
HIX0020388
HIT000204303 (
NM_013326
)
(Uncharacterized protein C18orf8 homolog; Colon cancer-associated protein Mic1; Mic-1;)
genome : 21,083,434 - 21,111,771 (28,338)
query : 1 - 2,226 (2,226/2,226)
20 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.863;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 16, nucl 12
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020388)
HIX0020388
HIT000725280 (
NM_001276342
)
(Uncharacterized protein C18orf8 homolog; Colon cancer-associated protein Mic1; Mic-1;)
genome : 21,083,434 - 21,111,771 (28,338)
query : 1 - 1,958 (1,958/1,958)
18 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.863;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 16, nucl 14.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020388)
HIX0020388
HIT000727726 (
NR_075075
)
(Uncharacterized protein C18orf8 homolog; Colon cancer-associated protein Mic1; Mic-1;)
genome : 21,083,434 - 21,111,771 (28,338)
query : 1 - 1,997 (1,997/1,997)
17 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.863;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020388)
HIX0020388
HIT000727727 (
NR_075076
)
(Uncharacterized protein C18orf8 homolog; Colon cancer-associated protein Mic1; Mic-1;)
genome : 21,083,434 - 21,111,771 (28,338)
query : 1 - 2,017 (2,017/2,017)
19 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.863;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10.5, extr 9, cyto_nucl 8, cysk 6, nucl 4.5,
extr_plas 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020388)
HIX0020388
HIT000110412 (
ENST00000269221
)
(Uncharacterized protein C18orf8 homolog; Colon cancer-associated protein Mic1; Mic-1;)
genome : 21,083,473 - 21,111,746 (28,274)
query : 1 - 2,162 (2,162/2,162)
20 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.863;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 16, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020388)
HIX0020388
HIT000013806
(
AK057192
)
(Uncharacterized protein C18orf8 homolog; Colon cancer-associated protein Mic1; Mic-1;)
genome : 21,083,473 - 21,111,742 (28,270)
query : 1 - 2,158 (2,158/2,158)
20 exons
identity = 0.993
5'(0.995;1.000;1.000;1.000;1.000;0.993;0.990;
1.000;1.000;0.991;1.000;0.863;1.000;1.000;
0.992;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009755 : Colon cancer-associated Mic1-like
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15.5, nucl 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020388)
HIX0020388
HIT000489870
(
AK295246
)
(Uncharacterized protein C18orf8 homolog; Colon cancer-associated protein Mic1; Mic-1;)
genome : 21,083,477 - 21,111,742 (28,266)
query : 1 - 1,945 (1,945/1,945)
19 exons
identity = 0.992
5'(0.990;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;0.991;1.000;0.863;1.000;1.000;0.992;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009755 : Colon cancer-associated Mic1-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, nucl 9, cyto 9, extr 8, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020388)
HIX0020388
HIT000701054 (
ENST00000589215
)
(Uncharacterized protein C18orf8 homolog; Colon cancer-associated protein Mic1; Mic-1;)
genome : 21,083,477 - 21,111,742 (28,266)
query : 1 - 1,945 (1,945/1,945)
19 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.863;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10.5, extr 9, cyto_nucl 8, cysk 6, nucl 4.5,
extr_plas 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020388)
HIX0020388
HIT000490854
(
AK296230
)
(Uncharacterized protein C18orf8 homolog; Colon cancer-associated protein Mic1; Mic-1;)
genome : 21,083,483 - 21,111,740 (28,258)
query : 1 - 2,002 (2,002/2,002)
18 exons
identity = 0.993
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.991;
0.991;1.000;0.863;1.000;1.000;0.992;1.000;
0.990;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009755 : Colon cancer-associated Mic1-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15.5, nucl 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020388)
HIX0020388
HIT000702694 (
ENST00000590868
)
(Uncharacterized protein C18orf8 homolog; Colon cancer-associated protein Mic1; Mic-1;)
genome : 21,083,483 - 21,111,740 (28,258)
query : 1 - 2,002 (2,002/2,002)
18 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.863;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15.5, nucl 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020388)
HIX0020388
HIT000488793
(
AK294169
)
(Uncharacterized protein C18orf8 homolog; Colon cancer-associated protein Mic1; Mic-1;)
genome : 21,083,487 - 21,111,771 (28,285)
query : 1 - 1,944 (1,944/1,944)
17 exons
identity = 0.992
5'(1.000;0.987;0.993;1.000;1.000;1.000;0.991;
1.000;0.863;0.992;1.000;0.992;1.000;1.000;
0.986;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009755 : Colon cancer-associated Mic1-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 12, nucl 9, extr 6, cysk 3,
extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020388)
HIX0020388
HIT000702696 (
ENST00000590870
)
(Uncharacterized protein C18orf8 homolog; Colon cancer-associated protein Mic1; Mic-1;)
genome : 21,083,497 - 21,111,707 (28,211)
query : 1 - 2,102 (2,102/2,102)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 7, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020388)
HIX0020388
HIT000033712
(
BC008305
)
Representative transcript
(Uncharacterized protein C18orf8 homolog; Colon cancer-associated protein Mic1; Mic-1;)
genome : 21,083,502 - 21,111,743 (28,242)
query : 1 - 2,130 (2,130/2,151)
20 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.863;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009755 : Colon cancer-associated Mic1-like
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 16, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020388)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK144623
Rattus
sp. (Rat) : BC087672
Bos
sp. (Cow) : BC151667
Tetraodon
sp. (Tetraodon) : CR636623
Danio
sp. (Zebrafish) : ENSDART00000050826
Oryzias
sp. (Medaka) : ENSORLT00000004163
Pongo
sp. (Orangutan) : ENSPPYT00000010578
Pan
sp. (Chimpanzee) : ENSPTRT00000018212
Takifugu
sp. (Fugu) : SINFRUT00000176703
Macaca
sp. (Macaque) : XM_001094510
Monodelphis
sp. (Opossum) : XM_001365897
Equus
sp. (Horse) : XM_001491891
Gallus
sp. (Chicken) : XM_419161
Canis
sp. (Dog) : XM_843438
HIX0020388
HIT000031309
(
BC002950
)
(Uncharacterized protein C18orf8 homolog; Colon cancer-associated protein Mic1; Mic-1;)
genome : 21,083,509 - 21,111,743 (28,235)
query : 1 - 2,123 (2,123/2,142)
20 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.863;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009755 : Colon cancer-associated Mic1-like
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 16, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020388)
HIX0020388
HIT000071236
(
AF143536
)
(Uncharacterized protein C18orf8 homolog; Colon cancer-associated protein Mic1; Mic-1;)
genome : 21,084,337 - 21,111,737 (27,401)
query : 1 - 1,975 (1,975/1,975)
19 exons
identity = 0.977
5'(1.000;1.000;1.000;1.000;0.993;0.990;1.000;
1.000;0.991;1.000;0.849;1.000;1.000;0.991;
0.775;0.990;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009755 : Colon cancer-associated Mic1-like
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 15.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020388)
HIX0020388
HIT000010380
(
AK027106
)
(Uncharacterized protein C18orf8 homolog; Colon cancer-associated protein Mic1; Mic-1;)
genome : 21,099,066 - 21,111,743 (12,678)
query : 1 - 1,274 (1,274/1,316)
12 exons
identity = 0.990
5'(1.000;0.991;1.000;0.863;1.000;1.000;0.992;
1.000;1.000;0.986;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009755 : Colon cancer-associated Mic1-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 11, cyto_nucl 9.16667, cyto 9, cyto_pero 6.33333,
nucl 5, extr 3, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020388)
HIX0014367
HIT000119833 (
ENST00000313654
)
(Laminin subunit alpha-3; Epiligrin 170 kDa subunit; E170; Epiligrin subunit alpha; Kalinin subunit alpha; Laminin-5 subunit alpha; Laminin-6 subunit alpha; Laminin-7 subunit alpha; Nicein subunit alpha; Precursor;)
genome : 21,269,407 - 21,535,030 (265,624)
query : 1 - 10,661 (10,661/10,661)
75 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.955;0.970;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, E.R. 2.5, E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014367)
HIX0014367
HIT000319167 (
NM_198129
)
(Laminin subunit alpha-3; Epiligrin 170 kDa subunit; E170; Epiligrin subunit alpha; Kalinin subunit alpha; Laminin-5 subunit alpha; Laminin-6 subunit alpha; Laminin-7 subunit alpha; Nicein subunit alpha; Precursor;)
genome : 21,269,562 - 21,535,030 (265,469)
query : 1 - 10,506 (10,506/10,511)
75 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.955;0.970;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, E.R. 2.5, E.R._golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014367)
HIX0014367
HIT000559376 (
NM_001127717
)
(Laminin subunit alpha-3; Epiligrin 170 kDa subunit; E170; Epiligrin subunit alpha; Kalinin subunit alpha; Laminin-5 subunit alpha; Laminin-6 subunit alpha; Laminin-7 subunit alpha; Nicein subunit alpha; Precursor;)
genome : 21,269,562 - 21,535,030 (265,469)
query : 1 - 10,338 (10,338/10,343)
74 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.955;0.970;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, E.R. 2.5, E.R._golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014367)
HIX0014367
HIT000251791
(
AY327115
)
Representative transcript
(Laminin subunit alpha-3; Epiligrin 170 kDa subunit; E170; Epiligrin subunit alpha; Kalinin subunit alpha; Laminin-5 subunit alpha; Laminin-6 subunit alpha; Laminin-7 subunit alpha; Nicein subunit alpha; Precursor;)
genome : 21,269,648 - 21,534,612 (264,965)
query : 1 - 10,002 (10,002/10,002)
75 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.955;0.970;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000034 : Laminin B type IV
IPR001791 : Laminin G domain
IPR002049 : EGF-like, laminin
IPR008211 : Laminin, N-terminal
IPR009254 : Laminin I
IPR010307 : Laminin domain II
IPR013032 : EGF-like, conserved site
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR018031 : Laminin B, subgroup
GO :
0005102 : Molecular Function : receptor binding
0005604 : Cellular Component : basement membrane
0005606 : Cellular Component : laminin-1 complex
0007155 : Biological Process : cell adhesion
0030155 : Biological Process : regulation of cell adhesion
0030334 : Biological Process : regulation of cell migration
0045995 : Biological Process : regulation of embryonic development
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, E.R. 2.5, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014367)
Ortholog candidate ( ->
Evola
)
Canis
sp. (Dog) : AF236865
Equus
sp. (Horse) : AF533668
Danio
sp. (Zebrafish) : DQ232730
Oryzias
sp. (Medaka) : ENSORLT00000021145
Pongo
sp. (Orangutan) : ENSPPYT00000013011
Tetraodon
sp. (Tetraodon) : GSTENT00028343001
Takifugu
sp. (Fugu) : SINFRUT00000165188
Rattus
sp. (Rat) : U61261
Mus
sp. (Mouse) : X84014
Macaca
sp. (Macaque) : XM_001095558
Pan
sp. (Chimpanzee) : XM_001156417
Monodelphis
sp. (Opossum) : XM_001365471
Gallus
sp. (Chicken) : XM_426078
HIX0014367
HIT000251792
(
AY327116
)
(Laminin subunit alpha-3; Epiligrin 170 kDa subunit; E170; Epiligrin subunit alpha; Kalinin subunit alpha; Laminin-5 subunit alpha; Laminin-6 subunit alpha; Laminin-7 subunit alpha; Nicein subunit alpha; Precursor;)
genome : 21,269,648 - 21,534,612 (264,965)
query : 1 - 9,834 (9,834/9,834)
74 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.955;0.970;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000034 : Laminin B type IV
IPR001791 : Laminin G domain
IPR002049 : EGF-like, laminin
IPR008211 : Laminin, N-terminal
IPR009254 : Laminin I
IPR010307 : Laminin domain II
IPR013032 : EGF-like, conserved site
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR018031 : Laminin B, subgroup
GO :
0005102 : Molecular Function : receptor binding
0005604 : Cellular Component : basement membrane
0005606 : Cellular Component : laminin-1 complex
0007155 : Biological Process : cell adhesion
0030155 : Biological Process : regulation of cell adhesion
0030334 : Biological Process : regulation of cell migration
0045995 : Biological Process : regulation of embryonic development
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, E.R. 2.5, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014367)
HIX0014367
HIT000482582 (
ENST00000399516
)
(Laminin subunit alpha-3; Epiligrin 170 kDa subunit; E170; Epiligrin subunit alpha; Kalinin subunit alpha; Laminin-5 subunit alpha; Laminin-6 subunit alpha; Laminin-7 subunit alpha; Nicein subunit alpha; Precursor;)
genome : 21,269,648 - 21,534,612 (264,965)
query : 1 - 9,834 (9,834/9,834)
74 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.955;0.970;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, E.R. 2.5, E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014367)
HIX0014367
HIT000324085
(
X84900
)
(Laminin subunit alpha-3; Epiligrin 170 kDa subunit; E170; Epiligrin subunit alpha; Kalinin subunit alpha; Laminin-5 subunit alpha; Laminin-6 subunit alpha; Laminin-7 subunit alpha; Nicein subunit alpha; Precursor;)
genome : 21,444,747 - 21,534,903 (90,157)
query : 2 - 5,712 (5,711/5,712)
40 exons
identity = 0.999
5'(0.970;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.995)3'
coverage = 1.000
InterPro :
IPR000034 : Laminin B type IV
IPR001791 : Laminin G domain
IPR002049 : EGF-like, laminin
IPR009254 : Laminin I
IPR010307 : Laminin domain II
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0005102 : Molecular Function : receptor binding
0005604 : Cellular Component : basement membrane
0005606 : Cellular Component : laminin-1 complex
0007155 : Biological Process : cell adhesion
0030155 : Biological Process : regulation of cell adhesion
0030334 : Biological Process : regulation of cell migration
0045995 : Biological Process : regulation of embryonic development
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 15.5, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014367)
HIX0014367
HIT000324100
(
X85108
)
(Laminin subunit alpha-3; Epiligrin 170 kDa subunit; E170; Epiligrin subunit alpha; Kalinin subunit alpha; Laminin-5 subunit alpha; Laminin-6 subunit alpha; Laminin-7 subunit alpha; Nicein subunit alpha; Precursor;)
genome : 21,444,747 - 21,511,164 (66,418)
query : 2 - 3,994 (3,993/3,994)
30 exons
identity = 0.996
5'(0.970;1.000;1.000;1.000;1.000;0.963;0.981;
1.000;1.000;1.000;1.000;1.000;1.000;0.991;
1.000;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;0.985;1.000;0.992;1.000;1.000;
0.993;0.993)3'
coverage = 1.000
InterPro :
IPR000034 : Laminin B type IV
IPR001791 : Laminin G domain
IPR002049 : EGF-like, laminin
IPR009254 : Laminin I
IPR010307 : Laminin domain II
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0005102 : Molecular Function : receptor binding
0005604 : Cellular Component : basement membrane
0005606 : Cellular Component : laminin-1 complex
0007155 : Biological Process : cell adhesion
0030155 : Biological Process : regulation of cell adhesion
0030334 : Biological Process : regulation of cell migration
0045995 : Biological Process : regulation of embryonic development
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.5, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014367)
HIX0014367
HIT000110410 (
ENST00000269217
)
(Laminin subunit alpha-3 isoform 2 precursor.)
genome : 21,452,804 - 21,534,903 (82,100)
query : 1 - 5,671 (5,671/5,671)
38 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 8, extr 7, cyto_nucl 6.5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014367)
HIX0014367
HIT000197274 (
NM_000227
)
(Laminin subunit alpha-3 isoform 2 precursor.)
genome : 21,452,984 - 21,535,030 (82,047)
query : 1 - 5,618 (5,618/5,623)
38 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 8, extr 7, cyto_nucl 6.5, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014367)
HIX0014367
HIT000559377 (
NM_001127718
)
(Laminin subunit alpha-3 isoform 4 precursor.)
genome : 21,452,984 - 21,535,030 (82,047)
query : 1 - 5,450 (5,450/5,455)
37 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 8, extr 7, cyto_nucl 6.5, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014367)
HIX0014367
HIT000324099
(
X85107
)
(Laminin subunit alpha-3 isoform 2 precursor.)
genome : 21,453,001 - 21,511,164 (58,164)
query : 12 - 3,766 (3,755/3,766)
28 exons
identity = 0.996
5'(0.983;1.000;1.000;0.963;0.981;1.000;1.000;
1.000;1.000;1.000;1.000;0.991;1.000;1.000;
1.000;1.000;1.000;0.993;1.000;1.000;1.000;
0.985;1.000;0.992;1.000;1.000;0.993;0.993)3'
coverage = 0.997
InterPro :
IPR001791 : Laminin G domain
IPR002049 : EGF-like, laminin
IPR009254 : Laminin I
IPR010307 : Laminin domain II
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0005102 : Molecular Function : receptor binding
0005604 : Cellular Component : basement membrane
0005606 : Cellular Component : laminin-1 complex
0007155 : Biological Process : cell adhesion
0030155 : Biological Process : regulation of cell adhesion
0030334 : Biological Process : regulation of cell migration
0045995 : Biological Process : regulation of embryonic development
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16.5, cyto_mito 11.3333, nucl 7.5,
cyto_nucl 6.83333, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014367)
HIX0014367
HIT000251790
(
AY327114
)
(Laminin subunit alpha-3 isoform 4 precursor.)
genome : 21,453,009 - 21,534,612 (81,604)
query : 1 - 5,007 (5,007/5,007)
37 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001791 : Laminin G domain
IPR002049 : EGF-like, laminin
IPR009254 : Laminin I
IPR010307 : Laminin domain II
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0005102 : Molecular Function : receptor binding
0005604 : Cellular Component : basement membrane
0005606 : Cellular Component : laminin-1 complex
0007155 : Biological Process : cell adhesion
0030155 : Biological Process : regulation of cell adhesion
0030334 : Biological Process : regulation of cell migration
0045995 : Biological Process : regulation of embryonic development
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 8, extr 7, cyto_nucl 6.5, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014367)
HIX0014367
HIT000699028 (
ENST00000587184
)
(Laminin subunit alpha-3 isoform 4 precursor.)
genome : 21,453,009 - 21,534,612 (81,604)
query : 1 - 5,007 (5,007/5,007)
37 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 8, extr 7, cyto_nucl 6.5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014367)
HIX0014367
HIT000193153
(
L34155
)
(Laminin subunit alpha-3 isoform 2 precursor.)
genome : 21,453,042 - 21,534,903 (81,862)
query : 1 - 5,433 (5,433/5,433)
38 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.995)3'
coverage = 1.000
InterPro :
IPR001791 : Laminin G domain
IPR002049 : EGF-like, laminin
IPR009254 : Laminin I
IPR010307 : Laminin domain II
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0005102 : Molecular Function : receptor binding
0005604 : Cellular Component : basement membrane
0005606 : Cellular Component : laminin-1 complex
0007155 : Biological Process : cell adhesion
0030155 : Biological Process : regulation of cell adhesion
0030334 : Biological Process : regulation of cell migration
0045995 : Biological Process : regulation of embryonic development
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 9.5, extr 6, cyto 4.5, mito 4.5,
E.R._mito 4.5, E.R. 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014367)
HIX0014367
HIT000698597 (
ENST00000586751
)
(Laminin subunit alpha-3; Epiligrin 170 kDa subunit; E170; Epiligrin subunit alpha; Kalinin subunit alpha; Laminin-5 subunit alpha; Laminin-6 subunit alpha; Laminin-7 subunit alpha; Nicein subunit alpha; Precursor;)
genome : 21,464,737 - 21,511,523 (46,787)
query : 1 - 3,494 (3,494/3,494)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13.5, cyto 10.5, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014367)
HIX0014367
HIT000097800
(
BC043618
)
(Laminin subunit alpha-3; Epiligrin 170 kDa subunit; E170; Epiligrin subunit alpha; Kalinin subunit alpha; Laminin-5 subunit alpha; Laminin-6 subunit alpha; Laminin-7 subunit alpha; Nicein subunit alpha; Precursor;)
genome : 21,478,225 - 21,534,953 (56,729)
query : 1 - 4,921 (4,921/4,937)
32 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR001791 : Laminin G domain
IPR009254 : Laminin I
IPR010307 : Laminin domain II
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0005102 : Molecular Function : receptor binding
0005604 : Cellular Component : basement membrane
0005606 : Cellular Component : laminin-1 complex
0007155 : Biological Process : cell adhesion
0030155 : Biological Process : regulation of cell adhesion
0030334 : Biological Process : regulation of cell migration
0045995 : Biological Process : regulation of embryonic development
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014367)
HIX0014367
HIT000700610 (
ENST00000588770
)
(Laminin subunit alpha-3; Epiligrin 170 kDa subunit; E170; Epiligrin subunit alpha; Kalinin subunit alpha; Laminin-5 subunit alpha; Laminin-6 subunit alpha; Laminin-7 subunit alpha; Nicein subunit alpha; Precursor;)
genome : 21,478,225 - 21,534,953 (56,729)
query : 1 - 4,921 (4,921/4,921)
32 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014367)
HIX0014367
HIT000328788
(
AB208853
)
(Laminin subunit alpha-3; Epiligrin 170 kDa subunit; E170; Epiligrin subunit alpha; Kalinin subunit alpha; Laminin-5 subunit alpha; Laminin-6 subunit alpha; Laminin-7 subunit alpha; Nicein subunit alpha; Precursor;)
genome : 21,478,968 - 21,534,957 (55,990)
query : 1 - 4,573 (4,573/4,573)
30 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996)3'
coverage = 1.000
InterPro :
IPR001791 : Laminin G domain
IPR009254 : Laminin I
IPR010307 : Laminin domain II
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0005102 : Molecular Function : receptor binding
0005604 : Cellular Component : basement membrane
0005606 : Cellular Component : laminin-1 complex
0007155 : Biological Process : cell adhesion
0030155 : Biological Process : regulation of cell adhesion
0030334 : Biological Process : regulation of cell migration
0045995 : Biological Process : regulation of embryonic development
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 14, cyto 7, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014367)
HIX0202665
HIT000214209 (
NM_153211
)
(Outer membrane protein Iml2/Tetratricopeptide repeat protein 39 family protein.)
genome : 21,572,737 - 21,715,574 (142,838)
query : 1 - 4,887 (4,887/4,900)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.990;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, cyto 9.5, extr 4, pero 3,
extr_plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202665)
HIX0202665
HIT000015947
(
AK091080
)
Representative transcript
(Outer membrane protein Iml2/Tetratricopeptide repeat protein 39 family protein.)
genome : 21,572,737 - 21,712,991 (140,255)
query : 1 - 2,304 (2,304/2,304)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000;1.000;1.000;0.990;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR019412 : Outer membrane protein Iml2/Tetratricopeptide repeat protein 39
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, cyto 9.5, extr 4, pero 3,
extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202665)
HIX0202665
HIT000116789 (
ENST00000304621
)
(Outer membrane protein Iml2/Tetratricopeptide repeat protein 39 family protein.)
genome : 21,572,737 - 21,712,991 (140,255)
query : 1 - 2,304 (2,304/2,304)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, cyto 9.5, extr 4, pero 3,
extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202665)
HIX0202665
HIT000388231
(
BC121034
)
(Outer membrane protein Iml2/Tetratricopeptide repeat protein 39 family protein.)
genome : 21,572,854 - 21,712,855 (140,002)
query : 1 - 2,051 (2,051/2,051)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.990;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR019412 : Outer membrane protein Iml2/Tetratricopeptide repeat protein 39
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, cyto 9.5, extr 4, pero 3,
extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202665)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK013267
Danio
sp. (Zebrafish) : BC095189
Canis
sp. (Dog) : ENSCAFT00000028858
Oryzias
sp. (Medaka) : ENSORLT00000001584
Pongo
sp. (Orangutan) : ENSPPYT00000010581
Pan
sp. (Chimpanzee) : ENSPTRT00000018221
Tetraodon
sp. (Tetraodon) : GSTENT00004885001
Takifugu
sp. (Fugu) : SINFRUT00000132539
Macaca
sp. (Macaque) : XM_001095756
Monodelphis
sp. (Opossum) : XM_001362747
Equus
sp. (Horse) : XM_001494666
Bos
sp. (Cow) : XM_612111
HIX0202665
HIT000388232
(
BC121035
)
(Outer membrane protein Iml2/Tetratricopeptide repeat protein 39 family protein.)
genome : 21,572,854 - 21,712,855 (140,002)
query : 1 - 2,051 (2,051/2,051)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.990;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR019412 : Outer membrane protein Iml2/Tetratricopeptide repeat protein 39
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, cyto 9.5, extr 4, pero 3,
extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202665)
HIX0202665
HIT000560237 (
NM_001135993
)
(Outer membrane protein Iml2/Tetratricopeptide repeat protein 39 family protein.)
genome : 21,594,384 - 21,715,574 (121,191)
query : 1 - 5,240 (5,240/5,253)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.990;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, nucl 9, pero 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202665)
HIX0202665
HIT000121347 (
ENST00000317571
)
(Outer membrane protein Iml2/Tetratricopeptide repeat protein 39 family protein.)
genome : 21,594,600 - 21,712,992 (118,393)
query : 1 - 2,442 (2,442/2,442)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, nucl 9, pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202665)
HIX0202665
HIT000092763
(
BC032684
)
(Outer membrane protein Iml2/Tetratricopeptide repeat protein 39 family protein.)
genome : 21,594,946 - 21,712,992 (118,047)
query : 12 - 2,107 (2,096/2,197)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.990;1.000;1.000)3'
coverage = 0.995
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR019412 : Outer membrane protein Iml2/Tetratricopeptide repeat protein 39
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 16, nucl 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202665)
HIX0014370
HIT000482564 (
ENST00000399496
)
(Calcium-binding tyrosine phosphorylation-regulated protein isoform c.)
genome : 21,718,942 - 21,741,564 (22,623)
query : 1 - 1,389 (1,389/1,389)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito_nucl 13.8333, cyto_nucl 11.8333,
mito 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000035592
(
BC011996
)
Representative transcript
(Calcium-binding tyrosine phosphorylation-regulated protein isoform c.)
genome : 21,718,955 - 21,741,564 (22,610)
query : 1 - 1,376 (1,376/1,390)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.998;1.000)3'
coverage = 1.000
InterPro :
IPR003117 : Dimerization-anchoring domain of cAMP-dependent protein kinase, regulatory subunit
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito_nucl 13.8333, cyto_nucl 11.8333,
mito 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB179138
Mus
sp. (Mouse) : AK132770
Monodelphis
sp. (Opossum) : ENSMODT00000027346
Pongo
sp. (Orangutan) : ENSPPYT00000010584
Pan
sp. (Chimpanzee) : XM_001157081
Equus
sp. (Horse) : XM_001493606
HIX0014370
HIT000214463 (
NM_153769
)
(Calcium-binding tyrosine phosphorylation-regulated protein isoform c.)
genome : 21,718,955 - 21,741,564 (22,610)
query : 1 - 1,376 (1,376/1,390)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito_nucl 13.8333, cyto_nucl 11.8333,
mito 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000203980 (
NM_012189
)
(Calcium-binding tyrosine phosphorylation-regulated protein; Calcium-binding protein 86; Cancer/testis antigen 88; CT88; Fibrousheathin II; Fibrousheathin-2; FSP-2; Testis-specific calcium-binding protein CBP86;)
genome : 21,718,955 - 21,741,564 (22,610)
query : 1 - 2,333 (2,333/2,333)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, mito 11, cyto_nucl 10, nucl 6, mito_pero 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000212481 (
NM_138643
)
(Calcium-binding tyrosine phosphorylation-regulated protein isoform d.)
genome : 21,718,955 - 21,741,564 (22,610)
query : 1 - 1,153 (1,153/1,153)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000214462 (
NM_153768
)
(Calcium-binding tyrosine phosphorylation-regulated protein isoform b.)
genome : 21,718,955 - 21,741,564 (22,610)
query : 1 - 2,279 (2,279/2,279)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 11.5, cyto_nucl 10.5, nucl 6.5,
mito_pero 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000214464 (
NM_153770
)
(Calcium-binding tyrosine phosphorylation-regulated protein isoform e.)
genome : 21,718,955 - 21,741,564 (22,610)
query : 1 - 902 (902/902)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito_nucl 14.5, mito 10, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000590497 (
ENST00000486759
)
(Calcium-binding tyrosine phosphorylation-regulated protein isoform b.)
genome : 21,718,981 - 21,741,561 (22,581)
query : 1 - 2,250 (2,250/2,250)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 11.5, cyto_nucl 10.5, nucl 6.5,
mito_pero 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000432109
(
AK313243
)
(Calcium-binding tyrosine phosphorylation-regulated protein isoform b.)
genome : 21,718,981 - 21,736,947 (17,967)
query : 1 - 1,554 (1,554/1,554)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003117 : Dimerization-anchoring domain of cAMP-dependent protein kinase, regulatory subunit
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 11.5, cyto_nucl 10.5, nucl 6.5,
mito_pero 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000496513
(
AK301889
)
(Calcium-binding tyrosine phosphorylation-regulated protein isoform d.)
genome : 21,719,026 - 21,739,626 (20,601)
query : 2 - 1,548 (1,547/1,548)
3 exons
identity = 0.999
5'(1.000;0.999;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000384988
(
AK225858
)
(Calcium-binding tyrosine phosphorylation-regulated protein isoform d.)
genome : 21,719,026 - 21,741,567 (22,542)
query : 1 - 1,308 (1,308/1,328)
6 exons
identity = 0.998
5'(1.000;1.000;0.981;1.000;1.000;0.989)3'
coverage = 0.985
InterPro :
IPR003117 : Dimerization-anchoring domain of cAMP-dependent protein kinase, regulatory subunit
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito_nucl 13.8333, cyto_nucl 11.8333,
mito 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000513243 (
ENST00000415309
)
(Calcium-binding tyrosine phosphorylation-regulated protein isoform e.)
genome : 21,719,026 - 21,741,567 (22,542)
query : 1 - 834 (834/834)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito_nucl 14.5, mito 10, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000482549 (
ENST00000399481
)
(Calcium-binding tyrosine phosphorylation-regulated protein; Calcium-binding protein 86; Cancer/testis antigen 88; CT88; Fibrousheathin II; Fibrousheathin-2; FSP-2; Testis-specific calcium-binding protein CBP86;)
genome : 21,719,026 - 21,739,626 (20,601)
query : 1 - 1,547 (1,547/1,547)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14.5, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000693772 (
ENST00000581872
)
(Calcium-binding tyrosine phosphorylation-regulated protein; Calcium-binding protein 86; Cancer/testis antigen 88; CT88; Fibrousheathin II; Fibrousheathin-2; FSP-2; Testis-specific calcium-binding protein CBP86;)
genome : 21,719,026 - 21,736,161 (17,136)
query : 1 - 871 (871/871)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 6, nucl 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000696897 (
ENST00000585037
)
(Calcium-binding tyrosine phosphorylation-regulated protein; Calcium-binding protein 86; Cancer/testis antigen 88; CT88; Fibrousheathin II; Fibrousheathin-2; FSP-2; Testis-specific calcium-binding protein CBP86;)
genome : 21,719,026 - 21,735,898 (16,873)
query : 1 - 605 (605/605)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 10, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000696616 (
ENST00000584752
)
(Calcium-binding tyrosine phosphorylation-regulated protein isoform d.)
genome : 21,719,026 - 21,735,832 (16,807)
query : 1 - 535 (535/535)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 6, nucl 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000689655 (
ENST00000577705
)
(Calcium-binding tyrosine phosphorylation-regulated protein; Calcium-binding protein 86; Cancer/testis antigen 88; CT88; Fibrousheathin II; Fibrousheathin-2; FSP-2; Testis-specific calcium-binding protein CBP86;)
genome : 21,719,027 - 21,735,869 (16,843)
query : 1 - 596 (596/596)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 9, E.R._mito 9, mito_pero 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000068139
(
AF088868
)
(Calcium-binding tyrosine phosphorylation-regulated protein; Calcium-binding protein 86; Cancer/testis antigen 88; CT88; Fibrousheathin II; Fibrousheathin-2; FSP-2; Testis-specific calcium-binding protein CBP86;)
genome : 21,719,059 - 21,741,561 (22,503)
query : 1 - 2,226 (2,226/2,228)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;0.998;0.998;1.000)3'
coverage = 0.999
InterPro :
IPR003117 : Dimerization-anchoring domain of cAMP-dependent protein kinase, regulatory subunit
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 11, cyto_nucl 9, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000077615
(
AF329634
)
(Calcium-binding tyrosine phosphorylation-regulated protein isoform d.)
genome : 21,719,059 - 21,741,561 (22,503)
query : 1 - 2,172 (2,172/2,174)
5 exons
identity = 0.998
5'(1.000;1.000;0.998;0.998;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 6, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000567896 (
ENST00000463087
)
(Calcium-binding tyrosine phosphorylation-regulated protein; Calcium-binding protein 86; Cancer/testis antigen 88; CT88; Fibrousheathin II; Fibrousheathin-2; FSP-2; Testis-specific calcium-binding protein CBP86;)
genome : 21,719,059 - 21,741,561 (22,503)
query : 1 - 2,226 (2,226/2,226)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, mito 11, cyto_nucl 10, nucl 6, mito_pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000076570
(
AF295039
)
(Calcium-binding tyrosine phosphorylation-regulated protein isoform e.)
genome : 21,719,059 - 21,741,558 (22,500)
query : 1 - 792 (792/792)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003117 : Dimerization-anchoring domain of cAMP-dependent protein kinase, regulatory subunit
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito_nucl 14.5, mito 10, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000693303 (
ENST00000581397
)
(Calcium-binding tyrosine phosphorylation-regulated protein isoform c.)
genome : 21,719,448 - 21,741,552 (22,105)
query : 1 - 1,272 (1,272/1,272)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito_nucl 13.8333, cyto_nucl 11.8333,
mito 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000691037 (
ENST00000579102
)
(Calcium-binding tyrosine phosphorylation-regulated protein; Calcium-binding protein 86; Cancer/testis antigen 88; CT88; Fibrousheathin II; Fibrousheathin-2; FSP-2; Testis-specific calcium-binding protein CBP86;)
genome : 21,719,589 - 21,735,718 (16,130)
query : 1 - 451 (451/451)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000212482 (
NM_138644
)
(Calcium-binding tyrosine phosphorylation-regulated protein isoform c.)
genome : 21,723,053 - 21,741,564 (18,512)
query : 35 - 1,284 (1,250/1,284)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.974
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito_nucl 13.8333, cyto_nucl 11.8333,
mito 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000482567 (
ENST00000399499
)
(Calcium-binding tyrosine phosphorylation-regulated protein isoform c.)
genome : 21,723,053 - 21,741,564 (18,512)
query : 35 - 1,284 (1,250/1,284)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.974
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito_nucl 13.8333, cyto_nucl 11.8333,
mito 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000076568
(
AF295037
)
(Calcium-binding tyrosine phosphorylation-regulated protein isoform c.)
genome : 21,723,053 - 21,741,552 (18,500)
query : 35 - 1,272 (1,238/1,272)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;0.998;1.000)3'
coverage = 0.973
InterPro :
IPR003117 : Dimerization-anchoring domain of cAMP-dependent protein kinase, regulatory subunit
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito_nucl 13.8333, cyto_nucl 11.8333,
mito 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000715254
(
HQ659768
)
(Calcium-binding tyrosine phosphorylation-regulated protein isoform c.)
genome : 21,723,053 - 21,739,536 (16,484)
query : 21 - 634 (614/634)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.968
InterPro :
IPR003117 : Dimerization-anchoring domain of cAMP-dependent protein kinase, regulatory subunit
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 5, nucl 4, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000650036
(
HM594168
)
(Calcium-binding tyrosine phosphorylation-regulated protein isoform c.)
genome : 21,723,079 - 21,740,033 (16,955)
query : 1 - 1,139 (1,139/1,140)
4 exons
identity = 0.996
5'(0.993;1.000;1.000;0.995)3'
coverage = 0.999
InterPro :
IPR003117 : Dimerization-anchoring domain of cAMP-dependent protein kinase, regulatory subunit
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito_nucl 13.3333, cyto_nucl 12.3333,
mito 8.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000650032
(
HM594164
)
(Calcium-binding tyrosine phosphorylation-regulated protein; Calcium-binding protein 86; Cancer/testis antigen 88; CT88; Fibrousheathin II; Fibrousheathin-2; FSP-2; Testis-specific calcium-binding protein CBP86;)
genome : 21,723,079 - 21,736,947 (13,869)
query : 1 - 1,482 (1,482/1,482)
3 exons
identity = 0.998
5'(1.000;0.981;0.998)3'
coverage = 1.000
InterPro :
IPR003117 : Dimerization-anchoring domain of cAMP-dependent protein kinase, regulatory subunit
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, mito 11, cyto_nucl 10, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000650033
(
HM594165
)
(Calcium-binding tyrosine phosphorylation-regulated protein; Calcium-binding protein 86; Cancer/testis antigen 88; CT88; Fibrousheathin II; Fibrousheathin-2; FSP-2; Testis-specific calcium-binding protein CBP86;)
genome : 21,723,079 - 21,736,947 (13,869)
query : 1 - 1,482 (1,482/1,482)
3 exons
identity = 0.998
5'(1.000;0.981;0.998)3'
coverage = 1.000
InterPro :
IPR003117 : Dimerization-anchoring domain of cAMP-dependent protein kinase, regulatory subunit
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, mito 11, cyto_nucl 10, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000650034
(
HM594166
)
(Calcium-binding tyrosine phosphorylation-regulated protein; Calcium-binding protein 86; Cancer/testis antigen 88; CT88; Fibrousheathin II; Fibrousheathin-2; FSP-2; Testis-specific calcium-binding protein CBP86;)
genome : 21,723,079 - 21,736,947 (13,869)
query : 1 - 1,482 (1,482/1,482)
3 exons
identity = 0.999
5'(0.993;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003117 : Dimerization-anchoring domain of cAMP-dependent protein kinase, regulatory subunit
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, mito 11, cyto_nucl 10, nucl 6, mito_pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000076569
(
AF295038
)
(Calcium-binding tyrosine phosphorylation-regulated protein isoform d.)
genome : 21,735,662 - 21,741,561 (5,900)
query : 20 - 1,044 (1,025/1,044)
3 exons
identity = 0.999
5'(1.000;0.998;1.000)3'
coverage = 0.982
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014370
HIT000124875 (
ENST00000327201
)
(Calcium-binding tyrosine phosphorylation-regulated protein isoform d.)
genome : 21,735,662 - 21,741,561 (5,900)
query : 20 - 1,044 (1,025/1,044)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.982
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014370)
HIX0014371
HIT000211820 (
NM_080597
)
(Oxysterol-binding protein-related protein 1; ORP-1; OSBP-related protein 1;)
genome : 21,742,012 - 21,977,833 (235,822)
query : 1 - 4,201 (4,201/4,224)
28 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15.8333, cyto 7,
cyto_mito 4.33333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014371)
HIX0014371
HIT000657598 (
NM_001242508
)
(Oxysterol-binding protein-related protein 1 isoform 3.)
genome : 21,742,012 - 21,891,470 (149,459)
query : 1 - 2,945 (2,945/2,968)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 15, cyto 10
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014371)
HIX0014371
HIT000077441
(
AF323726
)
(Oxysterol-binding protein-related protein 1; ORP-1; OSBP-related protein 1;)
genome : 21,742,009 - 21,977,790 (235,782)
query : 1 - 4,084 (4,084/4,089)
28 exons
identity = 0.996
3'(0.987;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000648 : Oxysterol-binding protein
IPR001849 : Pleckstrin homology domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15.8333, cyto 7,
cyto_mito 4.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014371)
HIX0014371
HIT000078855
(
AF392450
)
(Oxysterol-binding protein-related protein 1; ORP-1; OSBP-related protein 1;)
genome : 21,742,009 - 21,977,790 (235,782)
query : 1 - 4,153 (4,153/4,158)
28 exons
identity = 0.995
3'(0.985;1.000;1.000;0.983;1.000;1.000;1.000;
1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000648 : Oxysterol-binding protein
IPR001849 : Pleckstrin homology domain
IPR002110 : Ankyrin repeat
IPR018494 : Oxysterol-binding protein, conserved site
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15.8333, cyto 7,
cyto_mito 4.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014371)
HIX0014371
HIT000122080 (
ENST00000319481
)
(Oxysterol-binding protein-related protein 1; ORP-1; OSBP-related protein 1;)
genome : 21,742,008 - 21,977,823 (235,816)
query : 1 - 4,195 (4,195/4,195)
28 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15.8333, cyto 7,
cyto_mito 4.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014371)
HIX0014371
HIT000500470
(
BC136452
)
Representative transcript
(Oxysterol-binding protein-related protein 1; ORP-1; OSBP-related protein 1;)
genome : 21,742,113 - 21,977,730 (235,618)
query : 1 - 3,997 (3,997/3,997)
28 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000648 : Oxysterol-binding protein
IPR001849 : Pleckstrin homology domain
IPR002110 : Ankyrin repeat
IPR018494 : Oxysterol-binding protein, conserved site
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15.8333, cyto 7,
cyto_mito 4.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014371)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AY536214
Macaca
sp. (Macaque) : AY680534
Pongo
sp. (Orangutan) : CR857904
Equus
sp. (Horse) : ENSECAT00000028913
Oryzias
sp. (Medaka) : ENSORLT00000001818
Tetraodon
sp. (Tetraodon) : GSTENT00028341001
Tetraodon
sp. (Tetraodon) : GSTENT00032739001
Danio
sp. (Zebrafish) : NM_001045082
Takifugu
sp. (Fugu) : SINFRUT00000136591
Takifugu
sp. (Fugu) : SINFRUT00000146122
Takifugu
sp. (Fugu) : SINFRUT00000165195
Monodelphis
sp. (Opossum) : XM_001362403
Gallus
sp. (Chicken) : XM_419165
Pan
sp. (Chimpanzee) : XM_523889
Canis
sp. (Dog) : XM_537881
HIX0014371
HIT000502547
(
BC144117
)
(Oxysterol-binding protein-related protein 1; ORP-1; OSBP-related protein 1;)
genome : 21,742,113 - 21,977,730 (235,618)
query : 1 - 3,996 (3,996/3,996)
28 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;0.984;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000648 : Oxysterol-binding protein
IPR001849 : Pleckstrin homology domain
IPR002110 : Ankyrin repeat
IPR018494 : Oxysterol-binding protein, conserved site
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15.8333, cyto 7,
cyto_mito 4.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014371)
HIX0014371
HIT000021213
(
AK096358
)
(Oxysterol-binding protein-related protein 1; ORP-1; OSBP-related protein 1;)
genome : 21,743,051 - 21,977,833 (234,783)
query : 1 - 3,162 (3,162/3,162)
28 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.987;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000648 : Oxysterol-binding protein
IPR001849 : Pleckstrin homology domain
IPR002110 : Ankyrin repeat
IPR018494 : Oxysterol-binding protein, conserved site
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.8333, cyto 8,
cyto_mito 4.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014371)
HIX0014371
HIT000425692
(
AK292895
)
(Oxysterol-binding protein-related protein 1; ORP-1; OSBP-related protein 1;)
genome : 21,743,053 - 21,977,765 (234,713)
query : 1 - 3,092 (3,092/3,094)
28 exons
identity = 0.998
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;1.000;1.000;1.000;0.991;
1.000;1.000;1.000;1.000;1.000;1.000;0.984;
1.000;1.000;1.000;1.000;1.000;1.000;0.993)5'
coverage = 0.999
InterPro :
IPR000648 : Oxysterol-binding protein
IPR001849 : Pleckstrin homology domain
IPR002110 : Ankyrin repeat
IPR018494 : Oxysterol-binding protein, conserved site
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15.8333, cyto 7,
cyto_mito 4.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014371)
HIX0014371
HIT000310947 (
ENST00000357041
)
(Oxysterol-binding protein-related protein 1 isoform 3.)
genome : 21,743,098 - 21,891,480 (148,383)
query : 1 - 1,869 (1,869/1,869)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 15, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014371)
HIX0014371
HIT000496486
(
AK301862
)
(Oxysterol-binding protein-related protein 1 isoform 3.)
genome : 21,743,098 - 21,891,470 (148,373)
query : 1 - 1,859 (1,859/1,859)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000648 : Oxysterol-binding protein
IPR018494 : Oxysterol-binding protein, conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 15, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014371)
HIX0014371
HIT000056540
(
BX647893
)
(Oxysterol-binding protein-related protein 1 isoform 3.)
genome : 21,771,632 - 21,902,876 (131,245)
query : 5 - 8,028 (8,024/8,047)
12 exons
identity = 0.992
3'(0.996;1.000;1.000;0.982;1.000;0.992;1.000;
1.000;1.000;1.000;0.982;0.986)5'
coverage = 1.000
InterPro :
IPR000648 : Oxysterol-binding protein
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, mito_nucl 11.8333, nucl 8,
cyto_nucl 6.33333, cyto 3.5, extr 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014371)
HIX0014371
HIT000695994 (
ENST00000584119
)
(Oxysterol-binding protein-related protein 1 isoform 3.)
genome : 21,805,031 - 21,891,486 (86,456)
query : 1 - 585 (585/585)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014371)
HIX0014371
HIT000690037 (
ENST00000578091
)
(Oxysterol-binding protein-related protein 1 isoform 3.)
genome : 21,860,806 - 21,977,844 (117,039)
query : 1 - 1,354 (1,354/1,354)
13 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.953;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 9, extr_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014371)
HIX0014371
HIT000691773 (
ENST00000579851
)
(Oxysterol-binding protein-related protein 1; ORP-1; OSBP-related protein 1;)
genome : 21,860,806 - 21,977,787 (116,982)
query : 1 - 1,291 (1,291/1,291)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014371)
HIX0014371
HIT000694535 (
ENST00000582645
)
(Oxysterol-binding protein-related protein 1; ORP-1; OSBP-related protein 1;)
genome : 21,898,720 - 21,977,819 (79,100)
query : 1 - 690 (690/690)
6 exons
identity = 0.991
3'(1.000;1.000;1.000;1.000;0.953;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014371)
HIX0202685
pHIT000030845 ( pHIT000030845 )
Representative transcript
(Conserved hypothetical protein.)
genome : 22,006,721 - 22,078,461 (71,741)
query : 1 - 1,485 (1,485/1,485)
12 exons
InterPro :
IPR001498 : Impact, N-terminal
IPR006575 : RWD domain
IPR008102 : Histamine H4 receptor
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
IPR020568 : Ribosomal protein S5 domain 2-type fold
IPR020569 : Uncharacterised protein family UPF0029, Impact, conserved site
GO :
0004969 : Molecular Function : histamine receptor activity
0005515 : Molecular Function : protein binding
0006954 : Biological Process : inflammatory response
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007204 : Biological Process : positive regulation of cytosolic calcium ion concentration
0016021 : Cellular Component : integral component of membrane
0043408 : Biological Process : regulation of MAPK cascade
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202685)
CAGE tag :
H05BD51G0505
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : BX930334
Mus
sp. (Mouse) : D87973
Macaca
sp. (Macaque) : ENSMMUT00000006591
Oryzias
sp. (Medaka) : ENSORLT00000001752
Pongo
sp. (Orangutan) : ENSPPYT00000010587
Bos
sp. (Cow) : XM_001251983
Monodelphis
sp. (Opossum) : XM_001365134
Pan
sp. (Chimpanzee) : XM_512067
HIX0202685
pHIT000091915 ( pHIT000091915 )
(Conserved hypothetical protein.)
genome : 22,006,721 - 22,078,461 (71,741)
query : 1 - 1,494 (1,494/1,494)
12 exons
InterPro :
IPR001498 : Impact, N-terminal
IPR006575 : RWD domain
IPR008102 : Histamine H4 receptor
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
IPR020568 : Ribosomal protein S5 domain 2-type fold
IPR020569 : Uncharacterised protein family UPF0029, Impact, conserved site
GO :
0004969 : Molecular Function : histamine receptor activity
0005515 : Molecular Function : protein binding
0006954 : Biological Process : inflammatory response
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007204 : Biological Process : positive regulation of cytosolic calcium ion concentration
0016021 : Cellular Component : integral component of membrane
0043408 : Biological Process : regulation of MAPK cascade
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202685)
CAGE tag :
H27BB07H2404
HIX0225262
pHIT000091971 ( pHIT000091971 )
(Conserved hypothetical protein.)
genome : 21,080,250 - 21,111,668 (31,419)
query : 1 - 1,491 (1,491/1,491)
14 exons
InterPro :
IPR009755 : Colon cancer-associated Mic1-like
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225262)
CAGE tag :
H04BA34J2201,H05BB38I0403,H05BB41J2405
H05BB79E1402,H05BE48I1603
HIX0137193
pHIT000030833 ( pHIT000030833 )
Representative transcript
(Conserved hypothetical protein.)
genome : 21,289,784 - 21,290,251 (468)
query : 1 - 468 (468/468)
1 exon
InterPro :
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR012678 : Ribosomal protein L23/L15e core domain
IPR013025 : Ribosomal protein L25/L23
IPR019985 : Ribosomal protein L23
GO :
0000166 : Molecular Function : nucleotide binding
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0137193)
CAGE tag :
H05BD52J2202,H08BA08D1705,H09BA05K2113
H10BA97K0202,H27BA04K1304
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : XR_011699
Pan
sp. (Chimpanzee) : XR_021537
HIX0202685
pHIT000030845 ( pHIT000030845 )
Representative transcript
(Conserved hypothetical protein.)
genome : 22,006,721 - 22,078,461 (71,741)
query : 1 - 1,485 (1,485/1,485)
12 exons
InterPro :
IPR001498 : Impact, N-terminal
IPR006575 : RWD domain
IPR008102 : Histamine H4 receptor
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
IPR020568 : Ribosomal protein S5 domain 2-type fold
IPR020569 : Uncharacterised protein family UPF0029, Impact, conserved site
GO :
0004969 : Molecular Function : histamine receptor activity
0005515 : Molecular Function : protein binding
0006954 : Biological Process : inflammatory response
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007204 : Biological Process : positive regulation of cytosolic calcium ion concentration
0016021 : Cellular Component : integral component of membrane
0043408 : Biological Process : regulation of MAPK cascade
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202685)
CAGE tag :
H04BA16K0205,H04BB06D2104,H05BA82D0906
H05BD37L1704,H05BD51G0505
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : BX930334
Mus
sp. (Mouse) : D87973
Macaca
sp. (Macaque) : ENSMMUT00000006591
Oryzias
sp. (Medaka) : ENSORLT00000001752
Pongo
sp. (Orangutan) : ENSPPYT00000010587
Bos
sp. (Cow) : XM_001251983
Monodelphis
sp. (Opossum) : XM_001365134
Pan
sp. (Chimpanzee) : XM_512067
HIX0202685
pHIT000091915 ( pHIT000091915 )
(Conserved hypothetical protein.)
genome : 22,006,721 - 22,078,461 (71,741)
query : 1 - 1,494 (1,494/1,494)
12 exons
InterPro :
IPR001498 : Impact, N-terminal
IPR006575 : RWD domain
IPR008102 : Histamine H4 receptor
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
IPR020568 : Ribosomal protein S5 domain 2-type fold
IPR020569 : Uncharacterised protein family UPF0029, Impact, conserved site
GO :
0004969 : Molecular Function : histamine receptor activity
0005515 : Molecular Function : protein binding
0006954 : Biological Process : inflammatory response
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007204 : Biological Process : positive regulation of cytosolic calcium ion concentration
0016021 : Cellular Component : integral component of membrane
0043408 : Biological Process : regulation of MAPK cascade
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202685)
CAGE tag :
H04BA73C1702,H09BA41I1803,H10BA59I1104
H21BB53I1615,H27BB07H2404
AC026634.11
21000001-21089312 F -
NCBI
AC010853.11
21089313-21251371 F -
NCBI
AC067796.11
21251372-21395388 F -
NCBI
AC090366.8
21395389-21474083 F -
NCBI
AC010754.10
21474084-21661283 F +
NCBI
AC090772.9
21661284-21836217 F -
NCBI
AC023983.11
21836218-22005695 F +
NCBI
AC007922.13
22005696-22117251 F -
NCBI
AC090244.17
22117252-22195483 F -
NCBI
AC022884.12
22195484-22371050 F -
NCBI
AC018697.4
22371051-22534054 F -
NCBI
AC104961.7
22534055-22600000 F +
NCBI