bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0225303
HIT000581475_02 (
ENST00000477323
)
(Hypothetical protein.)
genome : 34,409,111 - 34,539,398 (130,288)
query : 1 - 567 (567/567)
6 exons
identity = 0.963
5'(0.984)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.5, cyto 10, extr 7, nucl 7, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225303)
HIX0039825
HIT000094750
(
BC037214
)
Representative transcript
(Conserved hypothetical protein.)
genome : 34,481,908 - 34,503,777 (21,870)
query : 1 - 689 (689/761)
4 exons
identity = 0.999
3'(0.993;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039825)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001140674
HIX0039825
HIT000697958 (
ENST00000586106
)
(Hypothetical short protein.)
genome : 34,481,909 - 34,503,777 (21,869)
query : 1 - 688 (688/688)
4 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15, nucl 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039825)
HIX0225298
HIT000703733 (
ENST00000591911
)
(Conserved hypothetical protein.)
genome : 34,503,868 - 34,647,164 (143,297)
query : 1 - 496 (496/496)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 12, nucl 2.5, cyto_nucl 2.5, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225298)
HIX0225298
HIT000702287 (
ENST00000590456
)
(Hypothetical short protein.)
genome : 34,503,874 - 34,535,815 (31,942)
query : 1 - 563 (563/563)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 13, cyto 11, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225298)
HIX0225298
HIT000095020
(
BC037903
)
Representative transcript
(Uncharacterized protein KIAA1328;)
genome : 34,504,866 - 34,802,268 (297,403)
query : 14 - 1,870 (1,857/1,886)
8 exons
identity = 0.998
5'(0.979;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 10, extr 5, cyto_mito 5, cyto_pero 5,
cyto_plas 5, cyto_golg 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225298)
HIX0225298
HIT000697987 (
ENST00000586135
)
(Conserved hypothetical protein.)
genome : 34,504,866 - 34,802,265 (297,400)
query : 10 - 1,863 (1,854/1,863)
8 exons
identity = 0.999
5'(0.986;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 10, extr 5, cyto_mito 5, cyto_pero 5,
cyto_plas 5, cyto_golg 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225298)
HIX0225298
HIT000087128
(
BC008670
)
(Uncharacterized protein KIAA1328;)
genome : 34,646,829 - 34,655,612 (8,784)
query : 1 - 1,578 (1,578/1,592)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 5, mito 4, cyto 2, golg 2, E.R._mito 2,
cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225298)
HIX0225298
HIT000698347 (
ENST00000586501
)
(Conserved hypothetical protein.)
genome : 34,646,829 - 34,655,611 (8,783)
query : 1 - 1,577 (1,577/1,577)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 5, mito 4, cyto 2, golg 2, E.R._mito 2,
cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225298)
HIX0225298
HIT000711248 (
ENST00000599493
)
(Conserved hypothetical protein.)
genome : 34,647,303 - 34,664,388 (17,086)
query : 1 - 507 (507/507)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 14, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225298)
HIX0096820
HIT000389213
(
BC127204
)
Representative transcript
(Hypothetical short protein.)
genome : 34,804,462 - 34,804,778 (317)
query : 9 - 325 (317/334)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 0.949
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 10.8333, extr 9, cyto 8,
cyto_pero 4.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096820)
HIX0096815
HIT000713176 (
ENST00000601437
)
(Conserved hypothetical protein.)
genome : 34,809,542 - 34,812,135 (2,594)
query : 1 - 2,594 (2,594/2,594)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 5.33333, cyto 3.5, nucl 3, mito 3,
cyto_pero 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096815)
HIX0096815
HIT000049750
(
AK130479
)
Representative transcript
(Conserved hypothetical protein.)
genome : 34,809,542 - 34,812,101 (2,560)
query : 1 - 2,557 (2,557/2,557)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 5.33333, cyto 3.5, nucl 3, mito 3,
cyto_pero 2.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096815)
HIX0039779
HIT000070762
(
AF131757
)
Representative transcript
(Conserved hypothetical protein.)
genome : 34,814,088 - 34,816,205 (2,118)
query : 1 - 2,118 (2,118/2,141)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 6, nucl 5.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039779)
HIX0039779
HIT000701553 (
ENST00000589715
)
(Conserved hypothetical protein.)
genome : 34,814,082 - 34,816,205 (2,124)
query : 1 - 2,124 (2,124/2,124)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 6, nucl 5.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039779)
HIX0018832
HIT000207778 (
NM_020180
)
(CUGBP Elav-like family member 4; CELF-4; Bruno-like protein 4; CUG-BP- and ETR-3-like factor 4; RNA-binding protein BRUNOL-4;)
genome : 34,823,009 - 35,146,000 (322,992)
query : 1 - 4,053 (4,053/4,070)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15, cyto 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000559163 (
NM_001025087
)
(CUGBP Elav-like family member 4; CELF-4; Bruno-like protein 4; CUG-BP- and ETR-3-like factor 4; RNA-binding protein BRUNOL-4;)
genome : 34,823,009 - 35,146,000 (322,992)
query : 1 - 4,050 (4,050/4,067)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.973;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15, cyto 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000559164 (
NM_001025088
)
(CUGBP Elav-like family member 4; CELF-4; Bruno-like protein 4; CUG-BP- and ETR-3-like factor 4; RNA-binding protein BRUNOL-4;)
genome : 34,823,009 - 35,146,000 (322,992)
query : 1 - 4,047 (4,047/4,064)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.973;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15, cyto 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000559165 (
NM_001025089
)
(CUGBP Elav-like family member 4 isoform 4.)
genome : 34,823,009 - 35,146,000 (322,992)
query : 1 - 3,939 (3,939/3,956)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 16, cyto 12.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000510687 (
ENST00000412753
)
(CUGBP Elav-like family member 4; CELF-4; Bruno-like protein 4; CUG-BP- and ETR-3-like factor 4; RNA-binding protein BRUNOL-4;)
genome : 34,823,010 - 35,146,000 (322,991)
query : 1 - 4,049 (4,049/4,049)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.973;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000518362 (
ENST00000420428
)
(CUGBP Elav-like family member 4; CELF-4; Bruno-like protein 4; CUG-BP- and ETR-3-like factor 4; RNA-binding protein BRUNOL-4;)
genome : 34,823,010 - 35,146,000 (322,991)
query : 1 - 4,046 (4,046/4,046)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.973;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000703110 (
ENST00000591287
)
(CUGBP Elav-like family member 4; CELF-4; Bruno-like protein 4; CUG-BP- and ETR-3-like factor 4; RNA-binding protein BRUNOL-4;)
genome : 34,823,010 - 35,145,711 (322,702)
query : 1 - 3,757 (3,757/3,757)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000129252 (
ENST00000334919
)
(CUGBP Elav-like family member 4 isoform 4.)
genome : 34,823,010 - 35,145,604 (322,595)
query : 1 - 3,542 (3,542/3,542)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 16, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000700431 (
ENST00000588591
)
(CUGBP Elav-like family member 4; CELF-4; Bruno-like protein 4; CUG-BP- and ETR-3-like factor 4; RNA-binding protein BRUNOL-4;)
genome : 34,823,010 - 34,853,006 (29,997)
query : 1 - 2,651 (2,651/2,651)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 16, nucl 11, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000697863 (
ENST00000586009
)
(CUGBP Elav-like family member 4; CELF-4; Bruno-like protein 4; CUG-BP- and ETR-3-like factor 4; RNA-binding protein BRUNOL-4;)
genome : 34,823,010 - 34,850,883 (27,874)
query : 1 - 2,542 (2,542/2,542)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 16.5, nucl 8, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0027392
HIT000046150
(
AK126277
)
Representative transcript
(Hypothetical protein.)
genome : 34,823,730 - 34,826,651 (2,922)
query : 1 - 2,922 (2,922/2,922)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 18, extr_plas 12.5, extr 5, cyto 4, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027392)
HIX0027392
HIT000701120 (
ENST00000589281
)
(Hypothetical short protein.)
genome : 34,823,739 - 34,827,179 (3,441)
query : 1 - 411 (411/411)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 10, extr 5, cyto_pero 5, cyto_golg 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027392)
HIX0018832
HIT000052966
(
BC045711
)
(CUGBP Elav-like family member 4 isoform 4.)
genome : 34,824,556 - 35,145,687 (321,132)
query : 1 - 2,079 (2,079/2,104)
12 exons
identity = 0.997
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.986)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 16, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000030772
(
BC001946
)
(CUGBP Elav-like family member 4; CELF-4; Bruno-like protein 4; CUG-BP- and ETR-3-like factor 4; RNA-binding protein BRUNOL-4;)
genome : 34,824,556 - 35,145,757 (321,202)
query : 1 - 2,261 (2,261/2,278)
13 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.991)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000031748
(
BC004167
)
(CUGBP Elav-like family member 4; CELF-4; Bruno-like protein 4; CUG-BP- and ETR-3-like factor 4; RNA-binding protein BRUNOL-4;)
genome : 34,824,556 - 35,145,757 (321,202)
query : 1 - 2,260 (2,260/2,277)
13 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.991)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000046589
(
AK126716
)
(CUGBP Elav-like family member 4; CELF-4; Bruno-like protein 4; CUG-BP- and ETR-3-like factor 4; RNA-binding protein BRUNOL-4;)
genome : 34,824,539 - 35,065,539 (241,001)
query : 1 - 3,274 (3,274/3,274)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.993;0.998;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 13, nucl 10, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000701947 (
ENST00000590112
)
(CUGBP Elav-like family member 4; CELF-4; Bruno-like protein 4; CUG-BP- and ETR-3-like factor 4; RNA-binding protein BRUNOL-4;)
genome : 34,824,577 - 35,065,539 (240,963)
query : 1 - 3,236 (3,236/3,236)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 13, nucl 10, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000701848 (
ENST00000590011
)
(Conserved hypothetical protein.)
genome : 34,824,797 - 34,833,944 (9,148)
query : 1 - 579 (579/579)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 10.8333, cyto_plas 9.83333, mito 6,
extr 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000081631
(
AK074596
)
(CUGBP Elav-like family member 4; CELF-4; Bruno-like protein 4; CUG-BP- and ETR-3-like factor 4; RNA-binding protein BRUNOL-4;)
genome : 34,824,931 - 35,145,728 (320,798)
query : 1 - 1,857 (1,857/1,857)
13 exons
identity = 0.992
3'(0.996;1.000;1.000;1.000;1.000;0.993;1.000;
0.967;0.988;0.992;1.000;1.000;0.988)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000712761 (
ENST00000601019
)
(CUGBP Elav-like family member 4; CELF-4; Bruno-like protein 4; CUG-BP- and ETR-3-like factor 4; RNA-binding protein BRUNOL-4;)
genome : 34,824,931 - 35,145,711 (320,781)
query : 1 - 1,836 (1,836/1,836)
13 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.979;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000074987
(
AF248651
)
(CUGBP Elav-like family member 4; CELF-4; Bruno-like protein 4; CUG-BP- and ETR-3-like factor 4; RNA-binding protein BRUNOL-4;)
genome : 34,824,934 - 34,850,861 (25,928)
query : 1 - 764 (764/764)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 15, nucl 11, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000329709
(
AB209774
)
Representative transcript
(CUGBP Elav-like family member 4; CELF-4; Bruno-like protein 4; CUG-BP- and ETR-3-like factor 4; RNA-binding protein BRUNOL-4;)
genome : 34,824,943 - 35,145,790 (320,848)
query : 1 - 1,910 (1,910/1,910)
13 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;0.993;1.000;
0.973;1.000;1.000;1.000;1.000;0.992)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169709
Rattus
sp. (Rat) : AF034891
Mus
sp. (Mouse) : AF515450
Danio
sp. (Zebrafish) : BC076238
Bos
sp. (Cow) : BC146142
Pongo
sp. (Orangutan) : CR860590
Gallus
sp. (Chicken) : EF520344
Monodelphis
sp. (Opossum) : ENSMODT00000000370
Oryzias
sp. (Medaka) : ENSORLT00000011185
Tetraodon
sp. (Tetraodon) : GSTENT00020174001
Takifugu
sp. (Fugu) : SINFRUT00000151019
Equus
sp. (Horse) : XM_001916405
Pan
sp. (Chimpanzee) : XM_512100
Canis
sp. (Dog) : XM_847823
HIX0018832
HIT000315047 (
ENST00000361795
)
(CUGBP Elav-like family member 4; CELF-4; Bruno-like protein 4; CUG-BP- and ETR-3-like factor 4; RNA-binding protein BRUNOL-4;)
genome : 34,824,943 - 35,145,711 (320,769)
query : 1 - 1,830 (1,830/1,830)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000699752 (
ENST00000587911
)
(CUGBP Elav-like family member 4; CELF-4; Bruno-like protein 4; CUG-BP- and ETR-3-like factor 4; RNA-binding protein BRUNOL-4;)
genome : 34,824,967 - 34,844,717 (19,751)
query : 1 - 532 (532/532)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.1667, cyto 15.5, cyto_plas 9.83333,
nucl 9.5, extr 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000077592
(
AF329265
)
(CUGBP Elav-like family member 4; CELF-4; Bruno-like protein 4; CUG-BP- and ETR-3-like factor 4; RNA-binding protein BRUNOL-4;)
genome : 34,833,774 - 35,145,604 (311,831)
query : 1 - 1,461 (1,461/1,461)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000703105 (
ENST00000591282
)
(CUGBP Elav-like family member 4; CELF-4; Bruno-like protein 4; CUG-BP- and ETR-3-like factor 4; RNA-binding protein BRUNOL-4;)
genome : 34,833,774 - 35,145,604 (311,831)
query : 1 - 1,461 (1,461/1,461)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000705089 (
ENST00000593271
)
(CUGBP Elav-like family member 4 isoform 4.)
genome : 34,833,801 - 34,853,006 (19,206)
query : 1 - 426 (426/426)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13.5, nucl 8.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000701225 (
ENST00000589386
)
(CUGBP Elav-like family member 4; CELF-4; Bruno-like protein 4; CUG-BP- and ETR-3-like factor 4; RNA-binding protein BRUNOL-4;)
genome : 34,833,818 - 34,853,006 (19,189)
query : 1 - 556 (556/556)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15.5, nucl 6.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000489633
(
AK295009
)
(CUGBP Elav-like family member 4 isoform 4.)
genome : 34,839,007 - 35,145,614 (306,608)
query : 1 - 1,444 (1,444/1,444)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13, nucl 7.5, extr 2, mito 2,
E.R. 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000700437 (
ENST00000588597
)
(CUGBP Elav-like family member 4 isoform 4.)
genome : 34,839,007 - 35,145,614 (306,608)
query : 1 - 1,444 (1,444/1,444)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13, nucl 7.5, extr 2, mito 2,
E.R. 2, E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000699499 (
ENST00000587657
)
(CUGBP Elav-like family member 4 isoform 4.)
genome : 34,839,143 - 34,853,006 (13,864)
query : 1 - 410 (410/410)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14.5, extr 8, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000389418
(
BC127795
)
(CUGBP Elav-like family member 4 isoform 4.)
genome : 34,846,180 - 34,853,121 (6,942)
query : 2 - 676 (675/681)
3 exons
identity = 0.996
3'(0.997;1.000;0.986)5'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 16, nucl 8, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000703243 (
ENST00000591421
)
(CUGBP Elav-like family member 4 isoform 4.)
genome : 34,846,180 - 34,853,121 (6,942)
query : 1 - 675 (675/675)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 16, nucl 8, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000698919 (
ENST00000587074
)
(CUGBP Elav-like family member 4 isoform 3.)
genome : 34,846,496 - 34,853,547 (7,052)
query : 1 - 411 (411/411)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14.5, nucl 7.5, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000016561
(
AK091694
)
(Conserved hypothetical protein.)
genome : 34,851,241 - 34,854,641 (3,401)
query : 1 - 2,253 (2,253/2,253)
2 exons
identity = 0.999
3'(0.998;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, extr 11, cyto_nucl 11, cyto 5.5,
extr_plas 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000074986
(
AF248650
)
(CUGBP Elav-like family member 4 isoform 4.)
genome : 34,853,016 - 35,145,735 (292,720)
query : 1 - 1,017 (1,017/1,017)
7 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.990)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 13, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000713131 (
ENST00000601392
)
(CUGBP Elav-like family member 4 isoform 4.)
genome : 34,853,016 - 35,145,711 (292,696)
query : 1 - 989 (989/989)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 13, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000699661 (
ENST00000587819
)
(CUGBP Elav-like family member 4; CELF-4; Bruno-like protein 4; CUG-BP- and ETR-3-like factor 4; RNA-binding protein BRUNOL-4;)
genome : 34,853,064 - 35,065,820 (212,757)
query : 1 - 677 (677/677)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 13, nucl 11, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0018832
HIT000701068 (
ENST00000589229
)
(CUGBP Elav-like family member 4; CELF-4; Bruno-like protein 4; CUG-BP- and ETR-3-like factor 4; RNA-binding protein BRUNOL-4;)
genome : 34,853,072 - 35,065,572 (212,501)
query : 21 - 592 (572/592)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.966
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 12.5, extr 8, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0225393
HIT000700606 (
ENST00000588766
)
(Hypothetical short protein.)
genome : 34,853,669 - 34,856,535 (2,867)
query : 1 - 464 (464/464)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 7.5, cyto_nucl 6.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225393)
HIX0225393
HIT000698456 (
ENST00000586610
)
(Hypothetical short protein.)
genome : 34,854,423 - 34,856,363 (1,941)
query : 1 - 469 (469/469)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 6, cyto_nucl 3, E.R._mito 3,
mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225393)
HIX0018832
HIT000699765 (
ENST00000587924
)
(CUGBP Elav-like family member 4 isoform 4.)
genome : 34,855,072 - 35,065,997 (210,926)
query : 1 - 316 (316/329)
4 exons
identity = 0.997
3'(0.993;1.000;1.000;1.000)5'
coverage = 0.960
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 7.5, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0096821
HIT000389907
(
BC128543
)
Representative transcript
(Conserved hypothetical protein.)
genome : 34,885,258 - 34,886,286 (1,029)
query : 14 - 1,042 (1,029/1,057)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.974
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 12, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096821)
HIX0115612
pHIT000030910 ( pHIT000030910 )
Representative transcript
(Hypothetical short protein.)
genome : 34,970,759 - 34,975,444 (4,686)
query : 1 - 174 (174/174)
2 exons
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0115612)
CAGE tag :
H22BB18M1203
HIX0059812
HIT000328410
(
AB072897
)
Representative transcript
(Conserved hypothetical protein.)
genome : 34,994,478 - 34,996,213 (1,736)
query : 1 - 1,736 (1,736/1,800)
1 exon
identity = 0.989
5'(0.989)3'
coverage = 0.964
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 7.5, cyto_nucl 7.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059812)
HIX0018832
HIT000699293 (
ENST00000587449
)
(CUGBP Elav-like family member 4; CELF-4; Bruno-like protein 4; CUG-BP- and ETR-3-like factor 4; RNA-binding protein BRUNOL-4;)
genome : 35,108,930 - 35,145,571 (36,642)
query : 1 - 475 (475/475)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12.5, nucl 8.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018832)
HIX0212732
HIT000659465 (
NR_036202
)
(Non-protein coding transcript.)
genome : 35,237,098 - 35,237,178 (81)
query : 1 - 81 (81/81)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212732)
HIX0212732
HIT000692457 (
ENST00000580543
)
(Non-protein coding transcript.)
genome : 35,237,098 - 35,237,178 (81)
query : 1 - 81 (81/81)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212732)
HIX0212684
HIT000571650 (
ENST00000467028
)
(Ribosomal protein L11, C-terminal domain containing protein.)
genome : 35,252,652 - 35,253,139 (488)
query : 1 - 488 (488/488)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 5, nucl 3, cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212684)
HIX0014412
HIT000498854
(
AK304230
)
Representative transcript
(Uncharacterized protein KIAA1328;)
genome : 34,409,069 - 34,811,481 (402,413)
query : 1 - 1,798 (1,798/1,798)
11 exons
identity = 0.998
5'(1.000;1.000;1.000;0.991;0.990;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014412)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB060879
Gallus
sp. (Chicken) : AJ851542
Mus
sp. (Mouse) : BC066089
Danio
sp. (Zebrafish) : BC134967
Pongo
sp. (Orangutan) : CR860265
Bos
sp. (Cow) : ENSBTAT00000028763
Pan
sp. (Chimpanzee) : XM_001139184
Monodelphis
sp. (Opossum) : XM_001367417
Equus
sp. (Horse) : XM_001497549
Canis
sp. (Dog) : XM_537278
Rattus
sp. (Rat) : XM_574113
HIX0014412
HIT000642968 (
ENST00000543923
)
(Uncharacterized protein KIAA1328;)
genome : 34,409,069 - 34,811,481 (402,413)
query : 1 - 1,798 (1,798/1,798)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014412)
HIX0014412
HIT000704429 (
ENST00000592611
)
(Uncharacterized protein KIAA1328;)
genome : 34,409,069 - 34,811,481 (402,413)
query : 1 - 1,798 (1,798/1,798)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014412)
HIX0014412
HIT000027537
(
AL832625
)
(Uncharacterized protein KIAA1328;)
genome : 34,409,080 - 34,805,288 (396,209)
query : 2 - 4,852 (4,851/4,873)
10 exons
identity = 0.997
5'(1.000;0.997;1.000;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014412)
HIX0014412
HIT000317461 (
NM_020776
)
(Uncharacterized protein KIAA1328;)
genome : 34,409,080 - 34,805,288 (396,209)
query : 1 - 4,854 (4,854/4,875)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15, cyto 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014412)
HIX0014412
HIT000111907 (
ENST00000280020
)
(Uncharacterized protein KIAA1328;)
genome : 34,409,080 - 34,805,287 (396,208)
query : 1 - 4,853 (4,853/4,853)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014412)
HIX0014412
HIT000533919 (
ENST00000435985
)
(Uncharacterized protein KIAA1328;)
genome : 34,409,080 - 34,773,614 (364,535)
query : 1 - 1,714 (1,714/1,714)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014412)
HIX0014412
HIT000425085
(
AK292288
)
(Uncharacterized protein KIAA1328;)
genome : 34,409,091 - 34,802,270 (393,180)
query : 1 - 1,825 (1,825/1,825)
10 exons
identity = 0.998
5'(1.000;0.997;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014412)
HIX0014412
HIT000057522
(
BX648875
)
(Uncharacterized protein KIAA1328;)
genome : 34,409,094 - 34,802,271 (393,178)
query : 2 - 1,837 (1,836/1,866)
10 exons
identity = 0.999
5'(1.000;0.998;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014412)
HIX0014412
HIT000702445 (
ENST00000590617
)
(Uncharacterized protein KIAA1328;)
genome : 34,409,094 - 34,802,270 (393,177)
query : 1 - 1,835 (1,835/1,835)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014412)
HIX0014412
HIT000698983 (
ENST00000587139
)
(Uncharacterized protein KIAA1328;)
genome : 34,409,203 - 34,803,641 (394,439)
query : 1 - 3,256 (3,256/3,256)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014412)
HIX0014412
HIT000703441 (
ENST00000591619
)
(Uncharacterized protein KIAA1328;)
genome : 34,412,637 - 34,809,848 (397,212)
query : 1 - 5,881 (5,881/5,881)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4.5, cyto_nucl 3, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014412)
HIX0014412
HIT000001043
(
AB037749
)
(Uncharacterized protein KIAA1328;)
genome : 34,412,997 - 34,809,848 (396,852)
query : 1 - 5,520 (5,520/5,520)
11 exons
identity = 0.999
5'(1.000;0.998;1.000;1.000;0.999;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4.5, cyto_nucl 3, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014412)
HIX0115612
pHIT000030910 ( pHIT000030910 )
Representative transcript
(Hypothetical short protein.)
genome : 34,970,759 - 34,975,444 (4,686)
query : 1 - 174 (174/174)
2 exons
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0115612)
CAGE tag :
H10BB11P0908,H22BA39E0910,H22BA57C2305
H22BB18M1203
AC016493.14
34500001-34631644 F +
NCBI
AC023577.6
34631645-34743953 F +
NCBI
AC015961.16
34743954-34835025 F +
NCBI
AC090386.13
34835026-34986853 F -
NCBI
AC093332.10
34986854-35039519 F +
NCBI
AC129908.4
35039520-35213584 F +
NCBI
AC009899.12
35213585-35360324 F +
NCBI
AC091495.4
35360325-35440529 F -
NCBI
AC108452.3
35440530-35592798 F -
NCBI
AC105110.6
35592799-35615029 F -
NCBI
AC023263.4
35615030-35767814 F -
NCBI
AC100795.2
35767815-35920314 F -
NCBI
AC090916.3
35920315-36086291 F +
NCBI
AC092704.10
36086292-36100000 F -
NCBI