bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0225338
HIT000696888 (
ENST00000585028
)
genome : 4,775,053 - 5,004,523 (229,471)
query : 1 - 557 (557/557)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225338)
HIX0225338
HIT000696076 (
ENST00000584204
)
genome : 4,807,934 - 5,004,536 (196,603)
query : 1 - 561 (561/561)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225338)
HIX0225338
HIT000689577 (
ENST00000577627
)
genome : 5,002,758 - 5,003,253 (496)
query : 1 - 496 (496/496)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225338)
HIX0225354
HIT000695862 (
ENST00000583985
)
genome : 5,081,181 - 5,085,476 (4,296)
query : 1 - 540 (540/540)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225354)
HIX0225354
HIT000691074 (
ENST00000579141
)
genome : 5,084,991 - 5,095,814 (10,824)
query : 1 - 507 (507/507)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225354)
HIX0137198
HIT000690436 (
ENST00000578494
)
genome : 5,132,748 - 5,133,228 (481)
query : 1 - 481 (481/481)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0137198)
HIX0137198
HIT000483140 (
ENST00000400144
)
genome : 5,132,758 - 5,133,171 (414)
query : 1 - 414 (414/414)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0137198)
HIX0195608
HIT000561233 (
NM_001145194
)
genome : 5,143,672 - 5,197,255 (53,584)
query : 1 - 2,302 (2,302/2,302)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195608)
HIX0195608
HIT000692561 (
ENST00000580650
)
genome : 5,145,284 - 5,197,502 (52,219)
query : 1 - 523 (523/523)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195608)
HIX0195608
HIT000532173 (
ENST00000434239
)
genome : 5,145,368 - 5,197,224 (51,857)
query : 1 - 575 (575/575)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195608)
HIX0225663
HIT000696759 (
ENST00000584896
)
genome : 5,159,331 - 5,171,025 (11,695)
query : 1 - 547 (547/547)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225663)
HIX0019977
HIT000387983
(
BC119664
)
genome : 5,232,875 - 5,238,525 (5,651)
query : 1 - 977 (977/977)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019977)
HIX0019977
HIT000387984
(
BC119665
)
genome : 5,232,875 - 5,238,525 (5,651)
query : 1 - 607 (607/607)
2 exons
identity = 0.995
3'(0.997;0.993)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019977)
HIX0019977
HIT000691853 (
ENST00000579933
)
genome : 5,232,875 - 5,238,525 (5,651)
query : 1 - 977 (977/977)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019977)
HIX0019977
HIT000693077 (
ENST00000581170
)
genome : 5,232,875 - 5,238,525 (5,651)
query : 1 - 607 (607/607)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019977)
HIX0019977
HIT000556330 (
ENST00000458396
)
genome : 5,232,875 - 5,238,332 (5,458)
query : 1 - 414 (414/414)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019977)
HIX0019977
HIT000034988
(
BC010538
)
genome : 5,236,723 - 5,238,028 (1,306)
query : 1 - 1,306 (1,306/1,322)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019977)
HIX0019977
HIT000563030 (
NR_026849
)
genome : 5,236,723 - 5,238,028 (1,306)
query : 1 - 1,306 (1,306/1,322)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019977)
HIX0019977
HIT000692977 (
ENST00000581067
)
genome : 5,236,723 - 5,238,597 (1,875)
query : 1 - 1,875 (1,875/1,875)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019977)
HIX0019977
HIT000425540
(
AK292743
)
genome : 5,237,129 - 5,238,597 (1,469)
query : 9 - 1,477 (1,469/1,477)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 0.995
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019977)
HIX0014311
HIT000091390
(
BC027873
)
genome : 5,237,825 - 5,239,384 (1,560)
query : 1 - 1,560 (1,560/1,614)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014311)
HIX0014311
HIT000693374 (
ENST00000581471
)
genome : 5,237,825 - 5,239,388 (1,564)
query : 1 - 1,564 (1,564/1,564)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014311)
HIX0014311
HIT000451240
(
DQ584709
)
genome : 5,237,981 - 5,238,010 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014311)
HIX0014311
HIT000013543
(
AK056929
)
genome : 5,238,083 - 5,243,935 (5,853)
query : 1 - 2,935 (2,935/2,935)
3 exons
identity = 0.998
5'(0.997;0.998;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014311)
HIX0014311
HIT000694256 (
ENST00000582363
)
genome : 5,238,083 - 5,243,935 (5,853)
query : 1 - 2,935 (2,935/2,935)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014311)
HIX0014311
HIT000096917
(
BC041875
)
genome : 5,238,099 - 5,246,504 (8,406)
query : 1 - 3,992 (3,992/4,006)
3 exons
identity = 0.992
5'(0.996;1.000;0.990)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014311)
HIX0014311
HIT000562153 (
NR_015389
)
genome : 5,238,099 - 5,246,507 (8,409)
query : 1 - 3,979 (3,979/3,979)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014311)
HIX0014311
HIT000693906 (
ENST00000582008
)
genome : 5,238,099 - 5,246,507 (8,409)
query : 1 - 3,979 (3,979/3,979)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014311)
HIX0014311
HIT000692002 (
ENST00000580082
)
genome : 5,238,127 - 5,240,712 (2,586)
query : 1 - 832 (832/832)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014311)
HIX0014311
HIT000692595 (
ENST00000580684
)
genome : 5,238,549 - 5,243,910 (5,362)
query : 1 - 1,009 (1,009/1,009)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014311)
HIX0225530
HIT000692150 (
ENST00000580230
)
genome : 5,240,254 - 5,241,166 (913)
query : 1 - 913 (913/913)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225530)
HIX0014311
HIT000057631
(
BX648984
)
genome : 5,240,989 - 5,246,504 (5,516)
query : 2 - 3,384 (3,383/3,406)
3 exons
identity = 0.992
5'(0.992;1.000;0.991)3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014311)
HIX0014311
HIT000689393 (
ENST00000577439
)
genome : 5,240,989 - 5,246,507 (5,519)
query : 1 - 3,372 (3,372/3,372)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014311)
HIX0021351
HIT000023328
(
AK098498
)
genome : 5,281,817 - 5,285,332 (3,516)
query : 1 - 3,412 (3,412/3,425)
2 exons
identity = 0.993
3'(0.997;0.991)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021351)
HIX0039741
HIT000722985 (
NM_001243704
)
genome : 5,289,018 - 5,297,052 (8,035)
query : 1 - 3,342 (3,342/3,354)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039741)
HIX0039741
HIT000200242 (
NM_003409
)
genome : 5,289,018 - 5,296,194 (7,177)
query : 1 - 3,653 (3,653/3,665)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039741)
HIX0039741
HIT000560856 (
NM_001143823
)
genome : 5,289,018 - 5,296,194 (7,177)
query : 1 - 3,683 (3,683/3,695)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039741)
HIX0039741
HIT000722984 (
NM_001243702
)
genome : 5,289,018 - 5,295,701 (6,684)
query : 1 - 3,351 (3,351/3,363)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039741)
HIX0039741
HIT000310916 (
ENST00000357006
)
genome : 5,289,018 - 5,296,039 (7,022)
query : 1 - 3,528 (3,528/3,528)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039741)
HIX0039741
HIT000102055
(
D89859
)
genome : 5,289,379 - 5,293,313 (3,935)
query : 1 - 2,896 (2,896/2,896)
2 exons
identity = 0.997
3'(0.998;0.972)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039741)
HIX0039741
HIT000259673
(
BC057282
)
genome : 5,289,718 - 5,296,039 (6,322)
query : 1 - 2,828 (2,828/2,843)
4 exons
identity = 0.995
3'(0.995;1.000;1.000;0.991)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039741)
HIX0039741
HIT000325733
(
Y12726
)
genome : 5,290,437 - 5,293,281 (2,845)
query : 1 - 1,806 (1,806/1,861)
2 exons
identity = 0.995
3'(0.995;1.000)5'
coverage = 0.970
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039741)
HIX0039741
HIT000339583
(
BC110519
)
genome : 5,290,505 - 5,293,292 (2,788)
query : 1 - 1,750 (1,750/1,750)
2 exons
identity = 0.997
3'(0.998;0.980)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039741)
HIX0039741
pHIT000092094 ( pHIT000092094 )
genome : 5,290,857 - 5,298,503 (7,647)
query : 1 - 1,593 (1,593/1,593)
4 exons
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039741)
CAGE tag :
H08BA53F1202
HIX0039741
HIT000483139 (
ENST00000400143
)
genome : 5,290,857 - 5,296,194 (5,338)
query : 1 - 1,814 (1,814/1,814)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039741)
HIX0039741
HIT000432102
(
AK313236
)
genome : 5,290,857 - 5,296,037 (5,181)
query : 1 - 1,657 (1,657/1,657)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039741)
HIX0039741
HIT000694280 (
ENST00000582388
)
genome : 5,291,544 - 5,295,701 (4,158)
query : 1 - 825 (825/825)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039741)
HIX0039741
HIT000694032 (
ENST00000582135
)
genome : 5,291,711 - 5,297,052 (5,342)
query : 1 - 649 (649/649)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039741)
HIX0039741
HIT000690271 (
ENST00000578327
)
genome : 5,291,900 - 5,294,823 (2,924)
query : 1 - 442 (442/442)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039741)
HIX0039741
HIT000697111 (
ENST00000585253
)
genome : 5,292,077 - 5,293,646 (1,570)
query : 1 - 531 (531/531)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039741)
HIX0225490
HIT000691047 (
ENST00000579113
)
genome : 5,310,395 - 5,317,663 (7,269)
query : 1 - 471 (471/471)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225490)
HIX0225568
HIT000693699 (
ENST00000581798
)
genome : 5,381,640 - 5,385,329 (3,690)
query : 1 - 463 (463/463)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225568)
HIX0014312
HIT000081109
(
AF515797
)
genome : 5,392,391 - 5,393,433 (1,043)
query : 1 - 1,042 (1,042/1,069)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000027510
(
AL832598
)
genome : 5,392,385 - 5,399,565 (7,181)
query : 1 - 4,908 (4,908/4,913)
5 exons
identity = 0.999
3'(0.999;1.000;0.992;1.000;0.999)5'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000015742
(
AK090875
)
genome : 5,392,380 - 5,394,648 (2,269)
query : 1 - 2,269 (2,269/2,269)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000134558 (
ENST00000341928
)
genome : 5,392,383 - 5,544,241 (151,859)
query : 1 - 4,706 (4,706/4,706)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000641697 (
ENST00000542652
)
genome : 5,392,385 - 5,466,362 (73,978)
query : 1 - 3,261 (3,261/3,261)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000690557 (
ENST00000578618
)
genome : 5,392,385 - 5,399,565 (7,181)
query : 1 - 4,908 (4,908/4,908)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000048404
(
AK128531
)
genome : 5,392,388 - 5,544,011 (151,624)
query : 1 - 3,770 (3,770/3,770)
20 exons
identity = 0.995
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
0.981;1.000;1.000;1.000;1.000;1.000;0.995;
1.000;1.000;1.000;1.000;0.919;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000000704
(
AB023204
)
genome : 5,392,388 - 5,543,986 (151,599)
query : 1 - 4,446 (4,446/4,446)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.981;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000204076 (
NM_012307
)
genome : 5,392,388 - 5,543,986 (151,599)
query : 1 - 4,446 (4,446/4,446)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.981;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000019807
(
AK094952
)
genome : 5,392,388 - 5,419,812 (27,425)
query : 1 - 2,249 (2,249/2,249)
9 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;0.995;
0.981;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000033753
(
BC008377
)
genome : 5,392,694 - 5,630,642 (237,949)
query : 1 - 1,819 (1,819/1,850)
9 exons
identity = 0.998
3'(1.000;1.000;0.967;1.000;1.000;1.000;1.000;
1.000;0.996)5'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000065642
(
AF069072
)
genome : 5,392,845 - 5,543,968 (151,124)
query : 4 - 3,298 (3,295/3,309)
20 exons
identity = 0.995
3'(0.994;1.000;1.000;0.990;0.985;0.995;1.000;
1.000;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.974;1.000)5'
coverage = 0.996
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000492030
(
AK297406
)
genome : 5,393,068 - 5,540,555 (147,488)
query : 1 - 3,284 (3,284/3,284)
21 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;0.977;1.000;1.000;0.995;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000643168 (
ENST00000544123
)
genome : 5,393,068 - 5,540,555 (147,488)
query : 1 - 3,284 (3,284/3,284)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000032631
(
BC006141
)
genome : 5,393,093 - 5,544,280 (151,188)
query : 1 - 3,369 (3,369/3,387)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.981;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000639683 (
ENST00000540638
)
genome : 5,393,092 - 5,544,280 (151,189)
query : 1 - 3,370 (3,370/3,370)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000425380
(
AK292583
)
genome : 5,393,102 - 5,628,990 (235,889)
query : 1 - 3,190 (3,190/3,190)
22 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.981;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.948;
1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000644121 (
ENST00000545076
)
genome : 5,393,102 - 5,628,990 (235,889)
query : 1 - 3,190 (3,190/3,190)
22 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.948;
1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000489314
(
AK294690
)
genome : 5,393,166 - 5,419,802 (26,637)
query : 1 - 1,648 (1,648/1,648)
11 exons
identity = 0.998
3'(0.997;0.991;1.000;1.000;1.000;1.000;1.000;
1.000;0.995;0.981;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000525618 (
ENST00000427684
)
genome : 5,393,166 - 5,419,802 (26,637)
query : 1 - 1,647 (1,647/1,647)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000490077
(
AK295453
)
genome : 5,393,179 - 5,419,800 (26,622)
query : 1 - 1,656 (1,656/1,656)
11 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;0.997;1.000;
1.000;0.995;0.981;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000641191 (
ENST00000542146
)
genome : 5,393,179 - 5,419,800 (26,622)
query : 1 - 1,656 (1,656/1,656)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000498303
(
AK303679
)
genome : 5,393,247 - 5,423,406 (30,160)
query : 1 - 1,685 (1,685/1,685)
12 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.981;0.995;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000489234
(
AK294610
)
genome : 5,394,675 - 5,419,806 (25,132)
query : 1 - 1,265 (1,265/1,277)
9 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.995;
0.981;1.000)5'
coverage = 0.991
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000135563 (
ENST00000342933
)
genome : 5,394,682 - 5,540,555 (145,874)
query : 1 - 3,492 (3,492/3,492)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000483108 (
ENST00000400111
)
genome : 5,394,682 - 5,540,555 (145,874)
query : 1 - 2,826 (2,826/2,826)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000691871 (
ENST00000579951
)
genome : 5,394,782 - 5,396,333 (1,552)
query : 1 - 598 (598/598)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000426617
(
AK307751
)
genome : 5,395,067 - 5,419,932 (24,866)
query : 21 - 1,328 (1,308/1,328)
9 exons
identity = 0.998
3'(1.000;0.990;1.000;0.997;1.000;1.000;1.000;
0.981;1.000)5'
coverage = 0.985
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000690466 (
ENST00000578524
)
genome : 5,396,198 - 5,419,812 (23,615)
query : 1 - 975 (975/975)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000693199 (
ENST00000581292
)
genome : 5,397,157 - 5,419,799 (22,643)
query : 1 - 551 (551/551)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000695931 (
ENST00000584055
)
genome : 5,397,247 - 5,407,327 (10,081)
query : 1 - 731 (731/731)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000433304
(
AK314438
)
genome : 5,397,392 - 5,478,356 (80,965)
query : 1 - 1,575 (1,575/1,575)
13 exons
identity = 0.999
3'(0.971;1.000;0.981;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000693293 (
ENST00000581387
)
genome : 5,397,392 - 5,419,814 (22,423)
query : 1 - 583 (583/583)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000691200 (
ENST00000579271
)
genome : 5,397,394 - 5,419,800 (22,407)
query : 1 - 591 (591/591)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000692558 (
ENST00000580647
)
genome : 5,397,397 - 5,419,793 (22,397)
query : 1 - 569 (569/569)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000692232 (
ENST00000580316
)
genome : 5,398,112 - 5,423,406 (25,295)
query : 1 - 564 (564/564)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000690142 (
ENST00000578196
)
genome : 5,400,868 - 5,419,837 (18,970)
query : 1 - 549 (549/549)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000694619 (
ENST00000582729
)
genome : 5,400,996 - 5,416,150 (15,155)
query : 1 - 663 (663/663)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000690338 (
ENST00000578395
)
genome : 5,406,847 - 5,420,205 (13,359)
query : 1 - 561 (561/561)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000693563 (
ENST00000581661
)
genome : 5,416,275 - 5,428,349 (12,075)
query : 1 - 582 (582/582)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000696536 (
ENST00000584670
)
genome : 5,419,798 - 5,540,395 (120,598)
query : 1 - 542 (542/542)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000426770
(
AK307904
)
genome : 5,428,403 - 5,577,647 (149,245)
query : 1 - 1,303 (1,303/1,303)
9 exons
identity = 0.997
3'(1.000;0.989;1.000;1.000;1.000;1.000;1.000;
1.000;0.991)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000690375 (
ENST00000578432
)
genome : 5,429,247 - 5,433,558 (4,312)
query : 1 - 229 (229/229)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000693658 (
ENST00000581757
)
genome : 5,431,211 - 5,434,120 (2,910)
query : 1 - 481 (481/481)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000696517 (
ENST00000584651
)
genome : 5,445,139 - 5,528,998 (83,860)
query : 1 - 546 (546/546)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000690445 (
ENST00000578503
)
genome : 5,445,139 - 5,489,249 (44,111)
query : 1 - 553 (553/553)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000692776 (
ENST00000580866
)
genome : 5,445,139 - 5,489,046 (43,908)
query : 1 - 489 (489/489)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000693358 (
ENST00000581454
)
genome : 5,445,139 - 5,488,938 (43,800)
query : 1 - 484 (484/484)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0225447
HIT000689478 (
ENST00000577527
)
genome : 5,463,626 - 5,480,974 (17,349)
query : 1 - 578 (578/578)
4 exons
identity = 0.991
5'(1.000;1.000;0.984;0.962)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225447)
HIX0014312
HIT000695892 (
ENST00000584015
)
genome : 5,478,240 - 5,543,419 (65,180)
query : 1 - 500 (500/500)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000692224 (
ENST00000580308
)
genome : 5,478,240 - 5,489,369 (11,130)
query : 1 - 492 (492/492)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000692899 (
ENST00000580989
)
genome : 5,478,246 - 5,521,422 (43,177)
query : 1 - 552 (552/552)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000693733 (
ENST00000581833
)
genome : 5,478,271 - 5,540,471 (62,201)
query : 1 - 572 (572/572)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000697000 (
ENST00000585142
)
genome : 5,478,282 - 5,540,555 (62,274)
query : 1 - 567 (567/567)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000694593 (
ENST00000582703
)
genome : 5,478,349 - 5,540,414 (62,066)
query : 1 - 551 (551/551)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000690374 (
ENST00000578431
)
genome : 5,478,353 - 5,630,699 (152,347)
query : 1 - 570 (570/570)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000692099 (
ENST00000580179
)
genome : 5,478,382 - 5,540,423 (62,042)
query : 1 - 496 (496/496)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0014312
HIT000694483 (
ENST00000582592
)
genome : 5,478,398 - 5,577,647 (99,250)
query : 1 - 553 (553/553)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0212721
HIT000616170 (
ENST00000516767
)
genome : 5,558,188 - 5,558,272 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212721)
HIX0225468
HIT000690335 (
ENST00000578391
)
genome : 5,567,129 - 5,570,941 (3,813)
query : 1 - 456 (456/456)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225468)
HIX0212720
HIT000616166 (
ENST00000516763
)
genome : 5,579,413 - 5,579,484 (72)
query : 1 - 72 (72/72)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212720)
HIX0014312
HIT000502939
(
BC144531
)
genome : 5,629,868 - 5,630,929 (1,062)
query : 1 - 1,062 (1,062/1,062)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014312)
HIX0039785
HIT000076657
(
AF301223
)
genome : 5,748,821 - 5,795,900 (47,080)
query : 9 - 1,695 (1,687/1,695)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039785)
HIX0039785
HIT000675651 (
ENST00000562452
)
genome : 5,748,818 - 5,876,327 (127,510)
query : 1 - 554 (554/554)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039785)
HIX0039785
HIT000660410 (
NR_038839
)
genome : 5,748,818 - 5,795,900 (47,083)
query : 1 - 1,690 (1,690/1,690)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039785)
HIX0039785
HIT000679568 (
ENST00000566533
)
genome : 5,748,818 - 5,795,900 (47,083)
query : 1 - 1,690 (1,690/1,690)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039785)
HIX0039785
HIT000692293 (
ENST00000580378
)
genome : 5,762,441 - 5,793,795 (31,355)
query : 1 - 346 (346/346)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039785)
HIX0225381
HIT000695996 (
ENST00000584121
)
genome : 5,840,694 - 5,840,832 (139)
query : 1 - 139 (139/139)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225381)
HIX0225381
HIT000725835 (
NR_039772
)
genome : 5,840,694 - 5,840,832 (139)
query : 1 - 139 (139/139)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225381)
HIX0225339
HIT000694823 (
ENST00000582939
)
genome : 5,887,486 - 5,889,462 (1,977)
query : 1 - 620 (620/620)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225339)
HIX0225339
HIT000692755 (
ENST00000580845
)
genome : 5,887,541 - 5,889,517 (1,977)
query : 1 - 521 (521/521)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225339)
HIX0225339
HIT000689644 (
ENST00000577694
)
genome : 5,887,617 - 5,909,121 (21,505)
query : 1 - 371 (371/371)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225339)
HIX0059827
HIT000693253 (
ENST00000581347
)
genome : 5,889,419 - 5,895,954 (6,536)
query : 1 - 3,290 (3,290/3,290)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059827)
HIX0059827
HIT000364768 (
ENST00000383490
)
genome : 5,890,184 - 5,892,103 (1,920)
query : 1 - 1,920 (1,920/1,920)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059827)
HIX0059827
HIT000397976 (
NM_001080209
)
genome : 5,890,184 - 5,892,103 (1,920)
query : 1 - 1,920 (1,920/1,920)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059827)
HIX0059827
pHIT000092125 ( pHIT000092125 )
genome : 5,890,197 - 5,895,915 (5,719)
query : 1 - 372 (372/372)
2 exons
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059827)
CAGE tag :
H28BB10N0311
HIX0017445
HIT000214852 (
NM_173464
)
genome : 5,954,705 - 6,414,910 (460,206)
query : 1 - 3,587 (3,587/3,604)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017445)
HIX0017445
HIT000010007
(
AK026733
)
genome : 5,954,719 - 6,093,390 (138,672)
query : 1 - 2,010 (2,010/2,030)
5 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017445)
HIX0017445
HIT000121487 (
ENST00000317931
)
genome : 5,954,705 - 6,414,910 (460,206)
query : 1 - 3,560 (3,560/3,560)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017445)
HIX0017445
HIT000483102 (
ENST00000400105
)
genome : 5,954,705 - 6,367,682 (412,978)
query : 1 - 3,546 (3,546/3,546)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017445)
HIX0017445
HIT000112546 (
ENST00000284898
)
genome : 5,954,706 - 6,414,910 (460,205)
query : 1 - 3,586 (3,586/3,586)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017445)
HIX0017445
HIT000015942
(
AK091075
)
genome : 5,954,713 - 6,241,398 (286,686)
query : 1 - 2,845 (2,845/2,845)
12 exons
identity = 0.995
3'(0.992;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017445)
HIX0017445
HIT000634827 (
ENST00000535782
)
genome : 5,954,713 - 6,241,398 (286,686)
query : 1 - 2,841 (2,841/2,841)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017445)
HIX0225451
HIT000689654 (
ENST00000577704
)
genome : 5,956,100 - 5,960,784 (4,685)
query : 1 - 244 (244/244)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225451)
HIX0017445
HIT000018122
(
AK093255
)
genome : 5,956,152 - 6,367,682 (411,531)
query : 1 - 2,099 (2,099/2,099)
20 exons
identity = 0.998
3'(0.991;1.000;0.988;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017445)
HIX0225457
HIT000689885 (
ENST00000577935
)
genome : 6,025,090 - 6,082,454 (57,365)
query : 1 - 544 (544/544)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225457)
HIX0017445
HIT000052193
(
BC039316
)
genome : 6,029,388 - 6,414,901 (385,514)
query : 2 - 4,519 (4,518/4,534)
17 exons
identity = 0.999
3'(0.998;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017445)
HIX0017445
HIT000483101 (
ENST00000400104
)
genome : 6,029,386 - 6,414,910 (385,525)
query : 1 - 4,534 (4,534/4,534)
17 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017445)
HIX0019282
HIT000023193
(
AK098363
)
genome : 6,057,048 - 6,058,436 (1,389)
query : 1 - 1,389 (1,389/1,389)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019282)
HIX0039741
pHIT000092094 ( pHIT000092094 )
genome : 5,290,857 - 5,298,503 (7,647)
query : 1 - 1,593 (1,593/1,593)
4 exons
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039741)
CAGE tag :
H05BD21K2207,H08BA06G1307,H08BA12H0602
H08BA50G1805,H08BA53F1202
HIX0059827
pHIT000092125 ( pHIT000092125 )
genome : 5,890,197 - 5,895,915 (5,719)
query : 1 - 372 (372/372)
2 exons
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059827)
CAGE tag :
H05BE01A1301,H10BB04J1107,H28BA37I1207
H28BA59N0301,H28BB10N0311
AP005403.3
4500001-4564563 F +
NCBI
AP001006.5
4564564-4730029 F +
NCBI
AP005272.2
4730030-4835651 F +
NCBI
AP005203.3
4835652-4984551 F +
NCBI
AP005138.3
4984552-5093821 F +
NCBI
AP005380.2
5093822-5193554 F +
NCBI
AP001496.4
5193555-5316587 F +
NCBI
AP005671.2
5316588-5400238 F +
NCBI
AP005059.2
5400239-5611063 F +
NCBI
AP001032.5
5611064-5680464 F +
NCBI
AP005231.2
5680465-5780897 F +
NCBI
AP005433.3
5780898-5902803 F +
NCBI
AP001021.5
5902804-6100000 F +
NCBI