bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0202719
HIT000527588 (
ENST00000429654
)
(Krueppel-associated box domain containing protein.)
genome : 11,998,599 - 12,017,082 (18,484)
query : 1 - 2,010 (2,010/2,010)
4 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202719)
HIX0202719
eHIT000009485 ( ESTsASS_19_918 )
(Non-protein coding transcript.)
genome : 11,998,599 - 12,015,799 (17,201)
query : 1 - 727 (727/727)
4 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202719)
ESTs used for assembly :
BG393583
HIX0202719
HIT000543845 (
ENST00000445911
)
(Krueppel-associated box domain containing protein.)
genome : 11,998,633 - 12,015,717 (17,085)
query : 1 - 569 (569/569)
4 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 6.5, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202719)
HIX0014784
HIT000018561
(
AK093694
)
Representative transcript
(Histone demethylase UTY isoform 1.)
genome : 12,004,771 - 12,007,032 (2,262)
query : 1 - 2,261 (2,261/2,261)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014784)
HIX0202719
HIT000004143
(
AK001669
)
Representative transcript
(Conserved hypothetical protein.)
genome : 12,016,196 - 12,017,941 (1,746)
query : 1 - 1,745 (1,745/1,745)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202719)
HIX0226156
HIT000043409
(
AK123536
)
Representative transcript
(Zinc finger protein 433.)
genome : 12,022,727 - 12,025,130 (2,404)
query : 1 - 1,790 (1,790/1,790)
2 exons
identity = 0.991
5'(0.992;0.989)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 9, extr 6, nucl 2, pero 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226156)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : XR_013526
HIX0014785
HIT000317826 (
NM_144566
)
(Zinc finger protein 439;)
genome : 12,035,883 - 12,061,588 (25,706)
query : 1 - 2,892 (2,892/2,892)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014785)
HIX0014785
HIT000725087 (
NM_001271848
)
(Zinc finger protein 439;)
genome : 12,035,883 - 12,061,588 (25,706)
query : 1 - 2,901 (2,901/2,901)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014785)
HIX0014785
HIT000427171
(
AK308305
)
(Zinc finger protein 439;)
genome : 12,035,897 - 12,060,396 (24,500)
query : 1 - 1,687 (1,687/1,687)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014785)
HIX0014785
HIT000025328
(
AL136732
)
(Zinc finger protein 439;)
genome : 12,035,900 - 12,061,578 (25,679)
query : 1 - 2,865 (2,865/2,884)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014785)
HIX0014785
HIT000106619 (
ENST00000254321
)
(Zinc finger protein 439;)
genome : 12,035,900 - 12,061,578 (25,679)
query : 1 - 2,865 (2,865/2,865)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014785)
HIX0014785
HIT000502818
(
BC144406
)
Representative transcript
(Zinc finger protein 439;)
genome : 12,035,954 - 12,061,405 (25,452)
query : 1 - 2,757 (2,757/2,757)
5 exons
identity = 0.999
5'(1.000;0.975;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014785)
Ortholog candidate ( ->
Evola
)
Monodelphis
sp. (Opossum) : ENSMODT00000023652
Pongo
sp. (Orangutan) : ENSPPYT00000011174
Pan
sp. (Chimpanzee) : ENSPTRT00000019375
Bos
sp. (Cow) : XM_001252548
Danio
sp. (Zebrafish) : XM_691532
HIX0014785
HIT000500768
(
BC136777
)
(Zinc finger protein 439;)
genome : 12,035,956 - 12,061,405 (25,450)
query : 1 - 2,636 (2,636/2,636)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014785)
HIX0226251
HIT000698243 (
ENST00000586394
)
(Non-protein coding transcript.)
genome : 12,050,774 - 12,064,196 (13,423)
query : 1 - 468 (468/468)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226251)
HIX0014785
HIT000046744
(
AK126871
)
(Zinc finger protein 439;)
genome : 12,057,569 - 12,061,588 (4,020)
query : 1 - 3,113 (3,113/3,113)
3 exons
identity = 0.999
5'(0.996;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014785)
HIX0014785
HIT000586041 (
ENST00000482090
)
(Zinc finger protein 439;)
genome : 12,057,569 - 12,061,588 (4,020)
query : 1 - 3,113 (3,113/3,113)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014785)
HIX0014785
HIT000339957
(
BC111557
)
(Non-protein coding transcript.)
genome : 12,061,256 - 12,061,314 (59)
query : 1 - 59 (59/59)
1 exon
identity = 0.983
5'(0.983)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014785)
HIX0212761
HIT000704443 (
ENST00000592625
)
(Zinc finger protein 763.)
genome : 12,075,852 - 12,089,210 (13,359)
query : 1 - 582 (582/582)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212761)
HIX0212761
HIT000365179 (
NM_001012753
)
(Zinc finger protein 763.)
genome : 12,075,869 - 12,091,197 (15,329)
query : 1 - 2,622 (2,622/2,639)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212761)
HIX0212761
HIT000017107
(
AK092240
)
Representative transcript
(Zinc finger protein 763.)
genome : 12,075,869 - 12,091,196 (15,328)
query : 1 - 2,621 (2,621/2,621)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212761)
HIX0212761
HIT000136579 (
ENST00000343949
)
(Zinc finger protein 763.)
genome : 12,075,869 - 12,090,390 (14,522)
query : 1 - 1,815 (1,815/1,815)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212761)
HIX0212761
HIT000493848
(
AK299224
)
(Zinc finger protein 763.)
genome : 12,075,869 - 12,090,295 (14,427)
query : 1 - 1,523 (1,523/1,523)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212761)
HIX0212761
HIT000644575 (
ENST00000545530
)
(Zinc finger protein 763.)
genome : 12,075,869 - 12,090,295 (14,427)
query : 1 - 1,523 (1,523/1,523)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212761)
HIX0212761
HIT000698340 (
ENST00000586494
)
(Zinc finger protein 763.)
genome : 12,075,869 - 12,089,345 (13,477)
query : 1 - 573 (573/573)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 6.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212761)
HIX0212761
HIT000312606 (
ENST00000358987
)
(Zinc finger protein 763.)
genome : 12,075,897 - 12,090,130 (14,234)
query : 1 - 1,518 (1,518/1,518)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212761)
HIX0212761
HIT000386458
(
BC105711
)
(Zinc finger protein 763.)
genome : 12,075,897 - 12,090,130 (14,234)
query : 1 - 1,518 (1,518/1,518)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212761)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK006897
Gallus
sp. (Chicken) : ENSGALT00000035600
Monodelphis
sp. (Opossum) : XM_001379253
Pan
sp. (Chimpanzee) : XR_024342
HIX0212761
HIT000386459
(
BC105712
)
(Zinc finger protein 763.)
genome : 12,075,897 - 12,090,130 (14,234)
query : 1 - 1,518 (1,518/1,518)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212761)
HIX0212761
HIT000386460
(
BC105713
)
(Zinc finger protein 763.)
genome : 12,075,897 - 12,090,130 (14,234)
query : 1 - 1,518 (1,518/1,518)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212761)
HIX0212761
HIT000585708 (
ENST00000481745
)
(Zinc finger protein 763.)
genome : 12,087,637 - 12,089,090 (1,454)
query : 1 - 564 (564/564)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 7.5, cyto 7, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212761)
HIX0022142
HIT000097206
(
BC042379
)
Representative transcript
(Conserved hypothetical protein.)
genome : 12,098,432 - 12,138,009 (39,578)
query : 1 - 1,257 (1,257/1,273)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 9, extr_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022142)
HIX0022142
HIT000098903
(
BC048140
)
(Conserved hypothetical protein.)
genome : 12,098,432 - 12,138,009 (39,578)
query : 1 - 1,257 (1,257/1,273)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 9, extr_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022142)
HIX0022142
HIT000505766 (
ENST00000406892
)
(Conserved hypothetical protein.)
genome : 12,098,432 - 12,138,009 (39,578)
query : 1 - 1,257 (1,257/1,257)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 9, extr_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022142)
HIX0022142
HIT000017064
(
AK092197
)
(Conserved hypothetical protein.)
genome : 12,098,471 - 12,138,553 (40,083)
query : 3 - 1,764 (1,762/1,764)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 9, extr_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022142)
HIX0022142
HIT000699888 (
ENST00000588047
)
(Hypothetical short protein.)
genome : 12,098,471 - 12,146,729 (48,259)
query : 1 - 529 (529/529)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022142)
HIX0022142
HIT000598691 (
ENST00000495324
)
(Conserved hypothetical protein.)
genome : 12,098,471 - 12,129,285 (30,815)
query : 1 - 516 (516/516)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 10, cyto_nucl 9.5, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022142)
HIX0022142
HIT000592941 (
ENST00000489336
)
(Conserved hypothetical protein.)
genome : 12,098,486 - 12,114,626 (16,141)
query : 1 - 622 (622/622)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022142)
HIX0022142
HIT000580666 (
ENST00000476474
)
(Conserved hypothetical protein.)
genome : 12,098,494 - 12,157,090 (58,597)
query : 1 - 607 (607/607)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022142)
HIX0022142
HIT000701389 (
ENST00000589551
)
(Conserved hypothetical protein.)
genome : 12,098,582 - 12,114,410 (15,829)
query : 1 - 523 (523/523)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022142)
HIX0023291
HIT000398000 (
NM_001080411
)
(Zinc finger protein 433.)
genome : 12,125,532 - 12,146,525 (20,994)
query : 1 - 2,321 (2,321/2,321)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023291)
HIX0023291
HIT000053127
(
BC047412
)
Representative transcript
(Zinc finger protein 433.)
genome : 12,125,547 - 12,146,491 (20,945)
query : 1 - 2,310 (2,310/2,323)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023291)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK143880
Equus
sp. (Horse) : ENSECAT00000017722
Monodelphis
sp. (Opossum) : ENSMODT00000003686
Monodelphis
sp. (Opossum) : ENSMODT00000029617
Macaca
sp. (Macaque) : XM_001108463
Equus
sp. (Horse) : XM_001915149
Pan
sp. (Chimpanzee) : XM_524445
Canis
sp. (Dog) : XM_542050
HIX0023291
HIT000517820 (
ENST00000419886
)
(Zinc finger protein 433.)
genome : 12,125,547 - 12,146,503 (20,957)
query : 1 - 2,322 (2,322/2,322)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023291)
HIX0023291
HIT000023130
(
AK098300
)
(Zinc finger protein 433.)
genome : 12,125,573 - 12,146,525 (20,953)
query : 1 - 2,280 (2,280/2,280)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023291)
HIX0023291
HIT000137610 (
ENST00000344980
)
(Zinc finger protein 433.)
genome : 12,125,573 - 12,146,525 (20,953)
query : 1 - 2,280 (2,280/2,280)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023291)
HIX0023291
HIT000664244 (
ENST00000550507
)
(Zinc finger protein 844;)
genome : 12,127,052 - 12,146,518 (19,467)
query : 1 - 785 (785/785)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023291)
HIX0023291
HIT000553438 (
ENST00000455504
)
(Zinc finger protein 433.)
genome : 12,127,217 - 12,146,484 (19,268)
query : 1 - 721 (721/721)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, extr 8, mito 6, cyto_pero 6, cyto_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023291)
HIX0023291
HIT000666330 (
ENST00000552904
)
(Zinc finger protein 433.)
genome : 12,127,219 - 12,146,493 (19,275)
query : 1 - 583 (583/583)
4 exons
identity = 0.990
3'(1.000;1.000;1.000;0.958)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 14, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023291)
HIX0023291
HIT000662636 (
ENST00000548669
)
(Zinc finger protein 433.)
genome : 12,127,227 - 12,146,511 (19,285)
query : 1 - 709 (709/709)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 10, cyto_mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023291)
HIX0023291
HIT000582859 (
ENST00000478765
)
(Zinc finger protein 433.)
genome : 12,127,363 - 12,129,492 (2,130)
query : 1 - 692 (692/692)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11, extr 6, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023291)
HIX0023291
HIT000661682 (
ENST00000547560
)
(Zinc finger protein 433.)
genome : 12,127,420 - 12,146,491 (19,072)
query : 1 - 449 (449/449)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 20, cyto 8, nucl 4, cyto_mito 4, cyto_pero 4,
cyto_plas 4, cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023291)
HIX0023291
HIT000664457 (
ENST00000550745
)
(Zinc finger protein 433.)
genome : 12,127,447 - 12,146,527 (19,081)
query : 1 - 467 (467/467)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, nucl 4, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023291)
HIX0023291
HIT000509775 (
ENST00000411841
)
(Zinc finger protein 433.)
genome : 12,129,006 - 12,146,556 (17,551)
query : 1 - 567 (567/567)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 9.5, cyto_nucl 9.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023291)
HIX0022142
HIT000048824
(
AK129553
)
(Conserved hypothetical protein.)
genome : 12,143,651 - 12,146,491 (2,841)
query : 1 - 2,538 (2,538/2,538)
2 exons
identity = 0.995
5'(0.985;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022142)
HIX0022142
HIT000703660 (
ENST00000591838
)
(Hypothetical short protein.)
genome : 12,146,367 - 12,157,090 (10,724)
query : 16 - 430 (415/430)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.965
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022142)
HIX0022142
HIT000703720 (
ENST00000591898
)
(Hypothetical short protein.)
genome : 12,146,638 - 12,157,090 (10,453)
query : 1 - 356 (356/356)
3 exons
identity = 0.978
5'(1.000;0.970;0.979)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022142)
HIX0202944
HIT000713840 (
ENST00000602107
)
(Krueppel-associated box domain containing protein.)
genome : 12,154,620 - 12,167,127 (12,508)
query : 1 - 1,737 (1,737/1,737)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202944)
HIX0202944
HIT000397993 (
NM_001080404
)
(Krueppel-associated box domain containing protein.)
genome : 12,154,620 - 12,163,782 (9,163)
query : 1 - 1,762 (1,762/1,762)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202944)
HIX0202944
HIT000661744 (
ENST00000547628
)
(Krueppel-associated box domain containing protein.)
genome : 12,154,620 - 12,163,754 (9,135)
query : 1 - 1,734 (1,734/1,734)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202944)
HIX0014787
HIT000537260 (
ENST00000439326
)
(Zinc finger protein 844;)
genome : 12,175,514 - 12,192,380 (16,867)
query : 1 - 6,620 (6,620/6,620)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014787)
HIX0014787
HIT000494356
(
AK299732
)
Representative transcript
(Zinc finger protein 844;)
genome : 12,175,514 - 12,191,385 (15,872)
query : 1 - 1,935 (1,935/1,935)
5 exons
identity = 0.996
5'(1.000;1.000;1.000;0.996;0.995)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014787)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC080693
Danio
sp. (Zebrafish) : BC134101
Equus
sp. (Horse) : ENSECAT00000004174
Macaca
sp. (Macaque) : ENSMMUT00000011272
Pan
sp. (Chimpanzee) : ENSPTRT00000019392
Rattus
sp. (Rat) : XM_001080227
HIX0014787
HIT000027209
(
AL832297
)
(Zinc finger protein 844;)
genome : 12,175,528 - 12,188,630 (13,103)
query : 1 - 2,856 (2,856/2,879)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014787)
HIX0014787
HIT000022957
(
AK098117
)
(Zinc finger protein 844;)
genome : 12,175,546 - 12,188,626 (13,081)
query : 1 - 2,834 (2,834/2,834)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014787)
HIX0014787
HIT000560388 (
NM_001136501
)
(Zinc finger protein 844;)
genome : 12,175,546 - 12,188,626 (13,081)
query : 1 - 2,834 (2,834/2,834)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014787)
HIX0014787
HIT000664530 (
ENST00000550826
)
(Zinc finger protein 627.)
genome : 12,175,546 - 12,186,696 (11,151)
query : 1 - 716 (716/716)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014787)
HIX0014787
HIT000435132
(
BC125185
)
(Zinc finger protein 844;)
genome : 12,175,625 - 12,187,968 (12,344)
query : 1 - 2,036 (2,036/2,036)
3 exons
identity = 1.000
5'(1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014787)
HIX0014787
HIT000539238 (
ENST00000441304
)
(Zinc finger protein 844;)
genome : 12,175,625 - 12,187,968 (12,344)
query : 1 - 2,036 (2,036/2,036)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014787)
HIX0014787
HIT000388638
(
BC125186
)
(Zinc finger protein 844;)
genome : 12,175,628 - 12,187,968 (12,341)
query : 1 - 2,094 (2,094/2,094)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014787)
HIX0014787
HIT000011137
(
AK027865
)
(Zinc finger protein 844;)
genome : 12,186,475 - 12,191,161 (4,687)
query : 1 - 4,693 (4,693/4,693)
1 exon
identity = 0.992
5'(0.992)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014787)
HIX0027476
HIT000563215 (
NR_027049
)
(Zinc finger protein 433.)
genome : 12,203,078 - 12,225,492 (22,415)
query : 1 - 3,767 (3,767/3,782)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027476)
HIX0027476
HIT000048573
(
AK128700
)
(Zinc finger protein 433.)
genome : 12,203,078 - 12,225,499 (22,422)
query : 1 - 3,773 (3,773/3,773)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, mito 5, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027476)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000019050
Monodelphis
sp. (Opossum) : ENSMODT00000031790
Pan
sp. (Chimpanzee) : XM_512399
HIX0027476
HIT000528232 (
ENST00000430298
)
(Zinc finger protein 433.)
genome : 12,203,078 - 12,225,499 (22,422)
query : 1 - 3,774 (3,774/3,774)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027476)
HIX0027476
HIT000131932 (
ENST00000339302
)
(Zinc finger protein 433.)
genome : 12,203,078 - 12,225,491 (22,414)
query : 1 - 3,766 (3,766/3,766)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027476)
HIX0027476
HIT000707885 (
ENST00000596096
)
(Activating molecule in BECN1-regulated autophagy protein 1 isoform 1.)
genome : 12,203,078 - 12,209,029 (5,952)
query : 1 - 566 (566/566)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 10.5, cyto_nucl 8.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027476)
HIX0027476
HIT000713423 (
ENST00000601686
)
(Zinc finger protein 20 isoform 1.)
genome : 12,203,122 - 12,248,050 (44,929)
query : 1 - 546 (546/546)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027476)
HIX0027476
HIT000707494 (
ENST00000595703
)
(Activating molecule in BECN1-regulated autophagy protein 1 isoform 1.)
genome : 12,203,122 - 12,208,956 (5,835)
query : 1 - 568 (568/568)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 6, cyto_pero 3.5, mito_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027476)
HIX0027476
HIT000481014 (
ENST00000397755
)
(Activating molecule in BECN1-regulated autophagy protein 1 isoform 1.)
genome : 12,203,151 - 12,211,603 (8,453)
query : 1 - 3,246 (3,246/3,246)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 13, extr 10, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027476)
HIX0027476
HIT000044028
(
AK124155
)
Representative transcript
(Conserved hypothetical protein.)
genome : 12,203,151 - 12,210,475 (7,325)
query : 1 - 2,118 (2,118/2,118)
4 exons
identity = 0.999
5'(1.000;1.000;0.992;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 13, extr 10, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027476)
HIX0027476
HIT000708666 (
ENST00000596883
)
(Zinc finger protein 177 isoform b.)
genome : 12,203,196 - 12,222,475 (19,280)
query : 1 - 692 (692/692)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027476)
HIX0014779
HIT000712079 (
ENST00000600335
)
(Krueppel-associated box domain containing protein.)
genome : 12,203,658 - 12,251,156 (47,499)
query : 1 - 560 (560/560)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014779)
HIX0202976
HIT000532376 (
ENST00000434442
)
(Ribosomal protein L24e-related family protein.)
genome : 12,207,239 - 12,207,730 (492)
query : 1 - 492 (492/492)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202976)
HIX0027476
HIT000048155
(
AK128282
)
(Zinc finger protein 433.)
genome : 12,222,669 - 12,225,567 (2,899)
query : 1 - 2,899 (2,899/2,899)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027476)
HIX0027476
HIT000481017 (
ENST00000397759
)
(Zinc finger protein 627.)
genome : 12,223,506 - 12,224,531 (1,026)
query : 1 - 777 (777/777)
3 exons
identity = 0.997
5'(1.000;0.986;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027476)
HIX0014779
HIT000584767 (
ENST00000480770
)
(Krueppel-associated box domain containing protein.)
genome : 12,241,300 - 12,247,689 (6,390)
query : 1 - 436 (436/436)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 5, cysk 3, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014779)
HIX0014779
HIT000317531 (
NM_021143
)
(Krueppel-associated box domain containing protein.)
genome : 12,242,169 - 12,251,222 (9,054)
query : 1 - 3,057 (3,057/3,077)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014779)
HIX0014779
HIT000656914 (
NM_001203250
)
(Krueppel-associated box domain containing protein.)
genome : 12,242,169 - 12,251,222 (9,054)
query : 1 - 3,048 (3,048/3,068)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014779)
HIX0014779
HIT000128827 (
ENST00000334213
)
(Krueppel-associated box domain containing protein.)
genome : 12,242,165 - 12,251,222 (9,058)
query : 1 - 3,061 (3,061/3,061)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014779)
HIX0014779
HIT000006368
(
AK023094
)
Representative transcript
(Zinc finger protein 20 isoform 1.)
genome : 12,242,803 - 12,251,116 (8,314)
query : 1 - 2,316 (2,316/2,316)
4 exons
identity = 0.997
3'(0.997;1.000;1.000;0.992)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014779)
HIX0014779
HIT000094581
(
BC036714
)
(Zinc finger protein 20; Zinc finger protein KOX13;)
genome : 12,242,931 - 12,251,140 (8,210)
query : 1 - 2,213 (2,213/2,241)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014779)
HIX0014779
HIT000024246
(
AL080125
)
(Zinc finger protein 20; Zinc finger protein KOX13;)
genome : 12,242,927 - 12,251,093 (8,167)
query : 2 - 2,172 (2,171/2,188)
4 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014779)
HIX0014779
HIT000052978
(
BC045814
)
(Zinc finger protein 20 isoform 2.)
genome : 12,242,931 - 12,248,544 (5,614)
query : 1 - 2,130 (2,130/2,145)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014779)
HIX0014779
HIT000321757
(
X52344
)
(Non-protein coding transcript.)
genome : 12,244,155 - 12,244,322 (168)
query : 1 - 168 (168/168)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014779)
HIX0014779
HIT000516800 (
ENST00000418866
)
(Krueppel-associated box domain containing protein.)
genome : 12,244,483 - 12,251,130 (6,648)
query : 1 - 642 (642/642)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 10.5, cyto_nucl 9, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014779)
HIX0014779
HIT000552883 (
ENST00000454949
)
(Conserved hypothetical protein.)
genome : 12,244,493 - 12,251,141 (6,649)
query : 1 - 669 (669/669)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 3, cyto 3, mito 3, cyto_nucl 3,
cyto_mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014779)
HIX0014779
HIT000589256 (
ENST00000485451
)
(Krueppel-associated box domain containing protein.)
genome : 12,244,506 - 12,248,517 (4,012)
query : 1 - 554 (554/554)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 6, nucl 3.5, cyto_nucl 3.5, lyso 3,
E.R._mito 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014779)
HIX0014779
HIT000583028 (
ENST00000478942
)
(Krueppel-associated box domain containing protein.)
genome : 12,246,301 - 12,251,170 (4,870)
query : 1 - 586 (586/586)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 11, cyto_nucl 4.16667, nucl 3.5,
cyto 3.5, cyto_pero 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014779)
HIX0014779
HIT000584495 (
ENST00000480477
)
(Conserved hypothetical protein.)
genome : 12,247,721 - 12,251,170 (3,450)
query : 1 - 545 (545/545)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 10, cyto_nucl 5.16667, nucl 4.5,
cyto 4.5, cyto_pero 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014779)
HIX0225887
HIT000576741 (
ENST00000472362
)
(Ribosomal protein L22/L17 family protein.)
genome : 12,252,621 - 12,254,137 (1,517)
query : 1 - 1,517 (1,517/1,517)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, extr 8, mito_nucl 8, cyto 6, nucl 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225887)
HIX0225887
HIT000512826 (
ENST00000414892
)
(Krueppel-associated box domain containing protein.)
genome : 12,252,905 - 12,258,617 (5,713)
query : 1 - 695 (695/695)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 12.5, extr 8, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225887)
HIX0225887
HIT000590358 (
ENST00000486612
)
(Ribosomal protein L22/L17 family protein.)
genome : 12,253,186 - 12,253,708 (523)
query : 1 - 523 (523/523)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, extr 8, mito_nucl 8, cyto 6, nucl 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225887)
HIX0225887
HIT000213139 (
NM_145233
)
(Krueppel-associated box domain containing protein.)
genome : 12,255,710 - 12,267,546 (11,837)
query : 1 - 1,694 (1,694/1,711)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225887)
HIX0225887
HIT000659993 (
NR_037801
)
(Conserved hypothetical protein.)
genome : 12,255,710 - 12,267,546 (11,837)
query : 1 - 1,690 (1,690/1,707)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225887)
HIX0225887
HIT000033501
(
BC007868
)
Representative transcript
(Conserved hypothetical protein.)
genome : 12,255,710 - 12,267,529 (11,820)
query : 1 - 1,673 (1,673/1,690)
4 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225887)
HIX0225887
HIT000553733 (
ENST00000455799
)
(Conserved hypothetical protein.)
genome : 12,255,705 - 12,267,529 (11,825)
query : 1 - 1,678 (1,678/1,678)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225887)
HIX0225887
HIT000309841 (
ENST00000355738
)
(Conserved hypothetical protein.)
genome : 12,255,711 - 12,267,529 (11,819)
query : 1 - 1,672 (1,672/1,672)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225887)
HIX0225887
HIT000502014
(
BC143563
)
(Conserved hypothetical protein.)
genome : 12,256,077 - 12,258,521 (2,445)
query : 1 - 1,055 (1,055/1,055)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225887)
HIX0225887
HIT000386379
(
BC101591
)
(Conserved hypothetical protein.)
genome : 12,256,079 - 12,258,521 (2,443)
query : 1 - 1,053 (1,053/1,053)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225887)
HIX0225887
HIT000537490 (
ENST00000439556
)
(Krueppel-associated box domain containing protein.)
genome : 12,256,080 - 12,267,544 (11,465)
query : 1 - 1,322 (1,322/1,322)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225887)
HIX0225887
HIT000386378
(
BC101589
)
(Conserved hypothetical protein.)
genome : 12,256,080 - 12,258,521 (2,442)
query : 1 - 1,052 (1,052/1,052)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225887)
HIX0014788
HIT000200266 (
NM_003437
)
(Zinc finger protein 136;)
genome : 12,273,872 - 12,300,064 (26,193)
query : 1 - 3,018 (3,018/3,035)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014788)
HIX0014788
HIT000424039
(
AK291242
)
(Zinc finger protein 136;)
genome : 12,273,879 - 12,299,209 (25,331)
query : 3 - 2,158 (2,156/2,158)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;0.999)3'
coverage = 0.999
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014788)
HIX0014788
HIT000136609 (
ENST00000343979
)
(Zinc finger protein 136;)
genome : 12,273,879 - 12,300,064 (26,186)
query : 1 - 3,011 (3,011/3,011)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014788)
HIX0014788
HIT000537929 (
ENST00000439995
)
(Zinc finger protein 136.)
genome : 12,273,879 - 12,297,658 (23,780)
query : 1 - 478 (478/478)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, mito_nucl 15.5, mito 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014788)
HIX0014788
HIT000523761 (
ENST00000425827
)
(Zinc finger protein 136.)
genome : 12,273,879 - 12,297,417 (23,539)
query : 1 - 474 (474/474)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13, nucl 8, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014788)
HIX0014788
HIT000032823
(
BC006421
)
Representative transcript
(Zinc finger protein 136;)
genome : 12,273,919 - 12,299,607 (25,689)
query : 1 - 2,514 (2,514/2,530)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014788)
HIX0014788
HIT000481790 (
ENST00000398616
)
(Zinc finger protein 136.)
genome : 12,273,922 - 12,299,143 (25,222)
query : 1 - 1,920 (1,920/1,920)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014788)
HIX0014788
HIT000494225
(
AK299601
)
(Zinc finger protein 136.)
genome : 12,273,922 - 12,299,143 (25,222)
query : 1 - 1,920 (1,920/1,920)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014788)
HIX0014788
HIT000516272 (
ENST00000418338
)
(Zinc finger protein 136.)
genome : 12,273,931 - 12,296,972 (23,042)
query : 1 - 565 (565/565)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014788)
HIX0014788
HIT000217904
(
U09367
)
(Zinc finger protein 136;)
genome : 12,273,953 - 12,299,617 (25,665)
query : 7 - 2,498 (2,492/2,504)
4 exons
identity = 0.998
5'(0.986;1.000;1.000;0.998)3'
coverage = 0.995
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014788)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : CR857524
Gallus
sp. (Chicken) : ENSGALT00000035876
Macaca
sp. (Macaque) : ENSMMUT00000020138
Pan
sp. (Chimpanzee) : XR_024348
HIX0014788
HIT000042881
(
AK123008
)
(Zinc finger protein 136.)
genome : 12,295,433 - 12,299,608 (4,176)
query : 1 - 3,579 (3,579/3,579)
3 exons
identity = 0.999
5'(0.999;0.967;0.999)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014788)
HIX0014788
HIT000569583 (
ENST00000464860
)
(Zinc finger protein 136.)
genome : 12,295,433 - 12,299,608 (4,176)
query : 1 - 3,579 (3,579/3,579)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014788)
HIX0014788
HIT000580857 (
ENST00000476676
)
(Zinc finger protein 136.)
genome : 12,296,644 - 12,297,493 (850)
query : 1 - 455 (455/455)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014788)
HIX0014788
HIT000255006
(
AY500356
)
(Zinc finger protein 14; Gonadotropin-inducible ovary transcription repressor 4; GIOT-4; Zinc finger protein KOX6;)
genome : 12,298,533 - 12,299,591 (1,059)
query : 2 - 1,059 (1,058/1,059)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014788)
HIX0018091
HIT000022932
(
AK098080
)
Representative transcript
(Conserved hypothetical protein.)
genome : 12,301,794 - 12,304,786 (2,993)
query : 2 - 2,886 (2,885/2,887)
2 exons
identity = 0.977
5'(0.984;0.949)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, mito 5.5, pero 4, E.R._mito 3.5, plas 2,
cyto 2, cyto_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018091)
HIX0018194
HIT000006578
(
AK023304
)
Representative transcript
(Conserved hypothetical protein.)
genome : 12,305,830 - 12,353,483 (47,654)
query : 1 - 1,691 (1,691/1,704)
3 exons
identity = 0.999
5'(1.000;0.999;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018194)
HIX0018194
HIT000537938 (
ENST00000440004
)
(Hypothetical short protein.)
genome : 12,305,830 - 12,348,247 (42,418)
query : 1 - 472 (472/472)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018194)
HIX0018194
HIT000513727 (
ENST00000415793
)
(Krueppel-associated box domain containing protein.)
genome : 12,305,830 - 12,318,512 (12,683)
query : 1 - 495 (495/495)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 6.5, cyto 5.5, nucl 4.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018194)
HIX0018194
HIT000523978 (
ENST00000426044
)
(Hypothetical short protein.)
genome : 12,305,832 - 12,348,582 (42,751)
query : 1 - 917 (917/917)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018194)
HIX0018194
HIT000549625 (
ENST00000451691
)
(Conserved hypothetical protein.)
genome : 12,305,903 - 12,318,269 (12,367)
query : 1 - 411 (411/411)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018194)
HIX0018194
HIT000018055
(
AK093188
)
(Conserved hypothetical protein.)
genome : 12,305,906 - 12,344,185 (38,280)
query : 1 - 2,127 (2,127/2,127)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018194)
HIX0225876
HIT000025890
(
AL137602
)
Representative transcript
(Conserved hypothetical protein.)
genome : 12,335,502 - 12,348,305 (12,804)
query : 1 - 1,086 (1,086/1,105)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15, nucl 10, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225876)
HIX0225876
HIT000709341 (
ENST00000597563
)
(Hypothetical short protein.)
genome : 12,336,974 - 12,348,404 (11,431)
query : 1 - 805 (805/805)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 8.5, cyto_nucl 7.5, cyto 5.5, extr 2,
pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225876)
HIX0225904
HIT000055254
(
BX640705
)
Representative transcript
(Conserved hypothetical protein.)
genome : 12,353,947 - 12,359,437 (5,491)
query : 1 - 2,855 (2,855/2,873)
2 exons
identity = 0.997
3'(0.999;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225904)
HIX0225904
HIT000524907 (
ENST00000426973
)
(Krueppel-associated box domain containing protein.)
genome : 12,358,092 - 12,361,618 (3,527)
query : 1 - 1,623 (1,623/1,623)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225904)
HIX0212883
HIT000566121 (
ENST00000461223
)
(Ribosomal L28e/Mak16 domain containing protein.)
genome : 12,370,941 - 12,371,352 (412)
query : 1 - 412 (412/412)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212883)
HIX0023297
HIT000206002 (
NM_016264
)
(Krueppel-associated box domain containing protein.)
genome : 12,382,626 - 12,405,714 (23,089)
query : 1 - 2,649 (2,649/2,674)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023297)
HIX0023297
HIT000653930 (
NM_001164276
)
(Krueppel-associated box domain containing protein.)
genome : 12,382,626 - 12,405,714 (23,089)
query : 1 - 2,793 (2,793/2,818)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023297)
HIX0023297
HIT000310158 (
ENST00000356109
)
(Krueppel-associated box domain containing protein.)
genome : 12,382,627 - 12,405,628 (23,002)
query : 1 - 2,706 (2,706/2,706)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023297)
HIX0023297
HIT000492152
(
AK297528
)
Representative transcript
(Zinc finger protein 44; Gonadotropin-inducible ovary transcription repressor 2; GIOT-2; Zinc finger protein 55; Zinc finger protein 58; Zinc finger protein KOX7;)
genome : 12,382,627 - 12,405,628 (23,002)
query : 1 - 2,706 (2,706/2,706)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023297)
HIX0023297
HIT000321545
(
X16281
)
(Conserved hypothetical protein.)
genome : 12,382,991 - 12,384,007 (1,017)
query : 1 - 1,012 (1,012/1,012)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023297)
HIX0023297
HIT000309792 (
ENST00000355684
)
(Krueppel-associated box domain containing protein.)
genome : 12,383,144 - 12,405,702 (22,559)
query : 1 - 2,119 (2,119/2,119)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023297)
HIX0023297
HIT000321751
(
X52338
)
(Conserved hypothetical protein.)
genome : 12,383,810 - 12,383,977 (168)
query : 1 - 168 (168/168)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023297)
HIX0023297
HIT000062746
(
AF024706
)
(Conserved hypothetical protein.)
genome : 12,384,212 - 12,384,427 (216)
query : 1 - 216 (216/216)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023297)
HIX0023297
HIT000308916 (
ENST00000354656
)
(Krueppel-associated box domain containing protein.)
genome : 12,385,794 - 12,405,666 (19,873)
query : 1 - 517 (517/517)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 14.5, extr 6, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023297)
HIX0174545
HIT000525992 (
ENST00000428058
)
(Ribosomal protein S5, eukaryotic/archaeal family protein.)
genome : 12,395,152 - 12,396,000 (849)
query : 1 - 849 (849/849)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 12, cyto 9.5, cyto_nucl 7.5, nucl 4.5, extr 3,
mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174545)
HIX0023297
HIT000030708
(
BC001868
)
(Zinc finger protein 44 isoform 1.)
genome : 12,397,870 - 12,405,714 (7,845)
query : 1 - 1,119 (1,119/1,137)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023297)
HIX0023297
HIT000587698 (
ENST00000483826
)
(Conserved hypothetical protein.)
genome : 12,401,843 - 12,405,695 (3,853)
query : 1 - 556 (556/556)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023297)
HIX0014778
HIT000039602
(
BC022523
)
(Zinc finger protein 563.)
genome : 12,428,305 - 12,444,502 (16,198)
query : 1 - 2,740 (2,740/2,755)
4 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014778)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK143880
Danio
sp. (Zebrafish) : XM_700864
Macaca
sp. (Macaque) : XR_013624
Pan
sp. (Chimpanzee) : XR_024359
Equus
sp. (Horse) : XR_044477
HIX0014778
HIT000213182 (
NM_145276
)
(Zinc finger protein 563.)
genome : 12,428,305 - 12,444,534 (16,230)
query : 1 - 2,772 (2,772/2,786)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014778)
HIX0014778
HIT000113729 (
ENST00000293725
)
(Zinc finger protein 563.)
genome : 12,428,305 - 12,444,502 (16,198)
query : 1 - 2,740 (2,740/2,754)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014778)
HIX0014778
HIT000016983
(
AK092116
)
Representative transcript
(Zinc finger protein 563.)
genome : 12,428,308 - 12,444,534 (16,227)
query : 1 - 2,067 (2,067/2,069)
6 exons
identity = 0.995
3'(0.991;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 10.5, cyto 8.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014778)
HIX0014778
HIT000432621
(
AK313755
)
(Zinc finger protein 563.)
genome : 12,429,408 - 12,444,436 (15,029)
query : 3 - 1,573 (1,571/1,573)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014778)
HIX0014778
HIT000706380 (
ENST00000594577
)
(Zinc finger protein 625.)
genome : 12,429,993 - 12,435,794 (5,802)
query : 13 - 749 (737/749)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.984
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014778)
HIX0014778
HIT000707768 (
ENST00000595977
)
(Zinc finger protein 823.)
genome : 12,430,001 - 12,444,534 (14,534)
query : 1 - 958 (958/958)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 10.5, cyto 8.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014778)
HIX0014778
HIT000713595 (
ENST00000601858
)
(Zinc finger protein 563.)
genome : 12,430,356 - 12,444,316 (13,961)
query : 1 - 564 (564/564)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, extr 11, nucl 10, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014778)
HIX0040340
HIT000264596
(
BC071777
)
Representative transcript
(Conserved hypothetical protein.)
genome : 12,456,764 - 12,458,752 (1,989)
query : 1 - 1,989 (1,989/2,018)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040340)
HIX0226197
HIT000676839 (
ENST00000563695
)
(Conserved hypothetical protein.)
genome : 12,456,763 - 12,458,752 (1,990)
query : 1 - 1,990 (1,990/1,990)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 10.5, cyto_nucl 10, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226197)
HIX0202730
HIT000209975 (
NM_030824
)
(Zinc finger protein 442;)
genome : 12,460,185 - 12,476,475 (16,291)
query : 1 - 2,825 (2,825/2,825)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202730)
HIX0202730
HIT000007692
(
AK024418
)
Representative transcript
(Zinc finger protein 442;)
genome : 12,460,185 - 12,476,447 (16,263)
query : 1 - 2,797 (2,797/2,797)
6 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202730)
HIX0202730
HIT000105233 (
ENST00000242804
)
(Zinc finger protein 442;)
genome : 12,460,185 - 12,476,447 (16,263)
query : 1 - 2,797 (2,797/2,797)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202730)
HIX0202730
HIT000490547
(
AK295923
)
(Zinc finger protein 442.)
genome : 12,460,397 - 12,476,455 (16,059)
query : 1 - 1,906 (1,906/1,906)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202730)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000007373
Monodelphis
sp. (Opossum) : ENSMODT00000021494
Pan
sp. (Chimpanzee) : XR_024359
HIX0202730
HIT000536116 (
ENST00000438182
)
(Zinc finger protein 442.)
genome : 12,460,397 - 12,476,455 (16,059)
query : 1 - 1,906 (1,906/1,906)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202730)
HIX0202730
HIT000522102 (
ENST00000424168
)
(Zinc finger protein 625.)
genome : 12,461,730 - 12,476,719 (14,990)
query : 1 - 567 (567/567)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 7, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202730)
HIX0202730
HIT000567806 (
ENST00000462995
)
(Zinc finger protein 442.)
genome : 12,462,605 - 12,476,475 (13,871)
query : 1 - 536 (536/536)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 11.5, cyto_nucl 10, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202730)
HIX0174628
HIT000556569 (
ENST00000458635
)
(Ribosomal protein S14 family protein.)
genome : 12,484,423 - 12,484,545 (123)
query : 1 - 123 (123/123)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174628)
HIX0020718
HIT000259768
(
BC057831
)
(Zinc finger protein 627.)
genome : 12,490,003 - 12,512,034 (22,032)
query : 1 - 2,539 (2,539/2,554)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020718)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB179467
Danio
sp. (Zebrafish) : AJ429491
Gallus
sp. (Chicken) : ENSGALT00000028363
Rattus
sp. (Rat) : ENSRNOT00000009270
Pan
sp. (Chimpanzee) : XR_024359
HIX0020718
HIT000532967 (
ENST00000435033
)
(Zinc finger protein 627.)
genome : 12,490,003 - 12,512,088 (22,086)
query : 1 - 2,593 (2,593/2,593)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020718)
HIX0020718
HIT000607027 (
ENST00000507003
)
(Zinc finger protein 799.)
genome : 12,490,560 - 12,494,501 (3,942)
query : 1 - 1,829 (1,829/1,829)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020718)
HIX0020718
HIT000087299
(
BC009517
)
(Zinc finger protein 443.)
genome : 12,500,830 - 12,502,385 (1,556)
query : 1 - 1,556 (1,556/1,573)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020718)
HIX0020718
HIT000027802
(
AL832890
)
(Zinc finger protein 799.)
genome : 12,500,830 - 12,505,934 (5,105)
query : 1 - 4,076 (4,076/4,091)
3 exons
identity = 0.999
3'(0.999;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020718)
HIX0020718
HIT000485079 (
NM_001080821
)
(Zinc finger protein 799; Zinc finger protein 842;)
genome : 12,500,828 - 12,512,088 (11,261)
query : 1 - 2,588 (2,588/2,588)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020718)
HIX0020718
HIT000528319 (
ENST00000430385
)
(Zinc finger protein 799; Zinc finger protein 842;)
genome : 12,500,830 - 12,512,085 (11,256)
query : 1 - 2,583 (2,583/2,583)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020718)
HIX0020718
HIT000517252 (
ENST00000419318
)
(Zinc finger protein 799.)
genome : 12,500,830 - 12,511,794 (10,965)
query : 1 - 3,036 (3,036/3,036)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020718)
HIX0020718
HIT000565846 (
ENST00000460935
)
(Zinc finger protein 799.)
genome : 12,500,830 - 12,505,934 (5,105)
query : 1 - 4,076 (4,076/4,076)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020718)
HIX0020718
HIT000010932
(
AK027660
)
(Zinc finger protein 799.)
genome : 12,500,831 - 12,511,794 (10,964)
query : 1 - 3,035 (3,035/3,035)
4 exons
identity = 0.999
3'(1.000;1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020718)
HIX0020718
HIT000707557 (
ENST00000595766
)
(Zinc finger protein 799.)
genome : 12,502,952 - 12,512,082 (9,131)
query : 1 - 576 (576/576)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 7, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020718)
HIX0020718
HIT000710517_02 (
ENST00000598753
)
(Zinc finger protein 791.)
genome : 12,504,143 - 12,595,630 (91,488)
query : 1 - 588 (588/588)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 10, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020718)
HIX0040322
HIT000098112
(
BC045675
)
Representative transcript
(LINE-1 reverse transcriptase homolog; EC=2.7.7.49;)
genome : 12,514,619 - 12,516,983 (2,365)
query : 1 - 2,365 (2,365/2,380)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
EC number :
EC 2.7.7.49
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040322)
HIX0018566
HIT000008838
(
AK025564
)
Representative transcript
(Conserved hypothetical protein.)
genome : 12,537,720 - 12,539,934 (2,215)
query : 1 - 2,217 (2,217/2,233)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018566)
HIX0014791
HIT000202473 (
NM_005815
)
(Zinc finger protein 443.)
genome : 12,540,520 - 12,551,926 (11,407)
query : 1 - 2,664 (2,664/2,736)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014791)
HIX0014791
HIT000041708
(
BC032753
)
(Zinc finger protein 443; Krueppel-type zinc finger protein ZK1;)
genome : 12,540,520 - 12,551,819 (11,300)
query : 12 - 2,568 (2,557/2,640)
4 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000)5'
coverage = 0.996
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014791)
HIX0014791
HIT000058279
(
AB011414
)
(Zinc finger protein 443; Krueppel-type zinc finger protein ZK1;)
genome : 12,540,520 - 12,551,832 (11,313)
query : 1 - 2,570 (2,570/2,580)
4 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014791)
HIX0014791
HIT000115898 (
ENST00000301547
)
(Zinc finger protein 443; Krueppel-type zinc finger protein ZK1;)
genome : 12,540,521 - 12,551,926 (11,406)
query : 1 - 2,663 (2,663/2,663)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014791)
HIX0014791
HIT000006299
(
AK023025
)
(Zinc finger protein 443; Krueppel-type zinc finger protein ZK1;)
genome : 12,540,521 - 12,544,012 (3,492)
query : 83 - 2,545 (2,463/2,545)
3 exons
identity = 0.994
3'(0.993;0.984;1.000)5'
coverage = 0.968
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014791)
HIX0014791
HIT000494156
(
AK299532
)
Representative transcript
(Zinc finger protein 443.)
genome : 12,540,698 - 12,551,763 (11,066)
query : 1 - 2,239 (2,239/2,239)
5 exons
identity = 0.997
3'(1.000;0.995;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014791)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK048743
Equus
sp. (Horse) : ENSECAT00000000595
HIX0014791
HIT000534755 (
ENST00000436821
)
(Zinc finger protein 136.)
genome : 12,542,383 - 12,551,835 (9,453)
query : 1 - 800 (800/800)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 5.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014791)
HIX0174530
HIT000517972 (
ENST00000420038
)
(Hypothetical short protein.)
genome : 12,561,749 - 12,571,519 (9,771)
query : 1 - 695 (695/695)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 10.5, cyto_nucl 8, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174530)
HIX0020718
HIT000094433
(
BC036481
)
(HERV-K_7p22.1 provirus ancestral Pro protein; EC=3.4.23.50; HERV-K(C7) Pro protein; HERV-K(HML-2.HOM) Pro protein; HERV-K108 Pro protein; Protease; Proteinase; PR;)
genome : 12,562,184 - 12,595,606 (33,423)
query : 1 - 4,217 (4,217/4,250)
3 exons
identity = 0.997
3'(0.997;1.000;0.993)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020718)
HIX0020718
HIT000213864 (
NM_152601
)
(Zinc finger protein 14; Gonadotropin-inducible ovary transcription repressor 4; GIOT-4; Zinc finger protein KOX6;)
genome : 12,571,998 - 12,595,632 (23,635)
query : 1 - 4,899 (4,899/4,916)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020718)
HIX0020718
HIT000480992 (
ENST00000397732
)
(Zinc finger protein 14; Gonadotropin-inducible ovary transcription repressor 4; GIOT-4; Zinc finger protein KOX6;)
genome : 12,571,998 - 12,595,643 (23,646)
query : 1 - 4,910 (4,910/4,910)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020718)
HIX0020718
HIT000423708
(
AK290911
)
(Zinc finger protein 14; Gonadotropin-inducible ovary transcription repressor 4; GIOT-4; Zinc finger protein KOX6;)
genome : 12,574,701 - 12,595,571 (20,871)
query : 1 - 2,134 (2,134/2,134)
4 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020718)
HIX0020718
HIT000500737
(
BC136746
)
(Zinc finger protein 14; Gonadotropin-inducible ovary transcription repressor 4; GIOT-4; Zinc finger protein KOX6;)
genome : 12,574,769 - 12,595,548 (20,780)
query : 1 - 2,044 (2,044/2,044)
4 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020718)
HIX0020718
HIT000500742
(
BC136751
)
(Zinc finger protein 14; Gonadotropin-inducible ovary transcription repressor 4; GIOT-4; Zinc finger protein KOX6;)
genome : 12,574,769 - 12,595,548 (20,780)
query : 1 - 2,044 (2,044/2,044)
4 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020718)
HIX0020718
HIT000095243
(
BC038531
)
Representative transcript
(Zinc finger protein 791.)
genome : 12,576,423 - 12,624,647 (48,225)
query : 1 - 400 (400/465)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, mito_nucl 15, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020718)
HIX0020718
HIT000553424 (
ENST00000455490
)
(Zinc finger protein 791.)
genome : 12,576,423 - 12,624,647 (48,225)
query : 1 - 400 (400/400)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, extr 3, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020718)
HIX0020718
HIT000597203 (
ENST00000493776
)
(Conserved hypothetical protein.)
genome : 12,605,632 - 12,624,668 (19,037)
query : 1 - 798 (798/798)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 11.5, extr 7, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020718)
HIX0174569
HIT000534652 (
ENST00000436718
)
(Hypothetical protein.)
genome : 12,613,489 - 12,614,920 (1,432)
query : 1 - 841 (841/841)
3 exons
identity = 0.993
5'(1.000;0.991;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 8, cyto 7, mito 6, extr 3, E.R. 3, nucl 2,
pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174569)
HIX0174601
HIT000546203 (
ENST00000448269
)
(Cytochrome c oxidase subunit I family protein.)
genome : 12,615,479 - 12,615,704 (226)
query : 1 - 226 (226/226)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
lyso 13, mito 10, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174601)
HIX0174532
HIT000518674 (
ENST00000420740
)
(Cytochrome c oxidase subunit II C-terminal domain containing protein.)
genome : 12,615,719 - 12,616,790 (1,072)
query : 1 - 428 (428/428)
2 exons
identity = 0.993
5'(1.000;0.991)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, cyto 17.5, nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174532)
HIX0174522
HIT000514921 (
ENST00000416987
)
(Hypothetical protein.)
genome : 12,617,402 - 12,618,844 (1,443)
query : 14 - 621 (608/621)
3 exons
identity = 0.992
5'(1.000;0.904;1.000)3'
coverage = 0.979
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 6, cyto 5.5, cyto_nucl 5.16667,
cyto_pero 4.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174522)
HIX0174604
HIT000547773 (
ENST00000449839
)
(Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain containing protein.)
genome : 12,618,943 - 12,619,077 (135)
query : 1 - 135 (135/135)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 13, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174604)
HIX0017253
HIT000212997 (
NM_144976
)
(Krueppel-associated box domain containing protein.)
genome : 12,636,184 - 12,662,356 (26,173)
query : 1 - 2,948 (2,948/2,963)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017253)
HIX0017253
HIT000040539
(
BC028367
)
Representative transcript
(Krueppel-associated box domain containing protein.)
genome : 12,636,184 - 12,662,288 (26,105)
query : 6 - 2,885 (2,880/2,900)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017253)
HIX0017253
HIT000131912 (
ENST00000339282
)
(Krueppel-associated box domain containing protein.)
genome : 12,636,185 - 12,662,327 (26,143)
query : 1 - 2,918 (2,918/2,918)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017253)
HIX0017253
HIT000056606
(
BX647959
)
(Conserved hypothetical protein.)
genome : 12,636,535 - 12,662,327 (25,793)
query : 1 - 2,569 (2,569/2,588)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017253)
HIX0017253
HIT000261726
(
BC065023
)
(Krueppel-associated box domain containing protein.)
genome : 12,636,539 - 12,662,266 (25,728)
query : 1 - 2,503 (2,503/2,514)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017253)
HIX0017253
HIT000017627
(
AK092760
)
(Krueppel-associated box domain containing protein.)
genome : 12,636,540 - 12,662,317 (25,778)
query : 1 - 2,553 (2,553/2,553)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017253)
HIX0017253
HIT000500721
(
BC136728
)
(Krueppel-associated box domain containing protein.)
genome : 12,636,766 - 12,662,192 (25,427)
query : 1 - 2,203 (2,203/2,203)
4 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017253)
HIX0017253
HIT000500722
(
BC136729
)
(Krueppel-associated box domain containing protein.)
genome : 12,636,766 - 12,662,192 (25,427)
query : 1 - 2,202 (2,202/2,202)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017253)
HIX0017253
HIT000525039 (
ENST00000427105
)
(Krueppel-associated box domain containing protein.)
genome : 12,638,672 - 12,662,281 (23,610)
query : 1 - 575 (575/575)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_nucl 2, nucl 1.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017253)
HIX0017253
HIT000707982 (
ENST00000596193
)
(Krueppel-associated box domain containing protein.)
genome : 12,639,118 - 12,662,356 (23,239)
query : 1 - 514 (514/524)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.981
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017253)
HIX0226713
HIT000713159 (
ENST00000601420
)
(Conserved hypothetical protein.)
genome : 12,640,582 - 12,643,787 (3,206)
query : 1 - 533 (533/533)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, mito 7, plas 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226713)
HIX0017253
HIT000514070 (
ENST00000416136
)
(Conserved hypothetical protein.)
genome : 12,659,527 - 12,662,248 (2,722)
query : 1 - 255 (255/255)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017253)
HIX0017253
HIT000570110 (
ENST00000465410
)
(Conserved hypothetical protein.)
genome : 12,661,056 - 12,662,246 (1,191)
query : 1 - 514 (514/514)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 9.5, cyto_nucl 9.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017253)
HIX0174518
HIT000512482 (
ENST00000414548
)
(Hypothetical short protein.)
genome : 12,663,411 - 12,664,458 (1,048)
query : 1 - 543 (543/543)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174518)
HIX0195911
HIT000529636 (
ENST00000431702
)
(Phosphoglycerate kinase family protein.)
genome : 12,670,385 - 12,671,919 (1,535)
query : 1 - 1,214 (1,214/1,214)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195911)
HIX0027562
HIT000044653
(
AK124780
)
Representative transcript
(Conserved hypothetical protein.)
genome : 12,678,680 - 12,682,576 (3,897)
query : 1 - 3,898 (3,898/3,898)
1 exon
identity = 0.989
5'(0.989)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 7, cyto_nucl 2.33333, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027562)
HIX0225820
HIT000052051
(
BC038586
)
Representative transcript
(Zinc finger protein 490;)
genome : 12,686,645 - 12,721,595 (34,951)
query : 12 - 6,354 (6,343/6,372)
5 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225820)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : CR385187
Macaca
sp. (Macaque) : ENSMMUT00000023686
Pan
sp. (Chimpanzee) : XM_001169078
HIX0225820
HIT000208043 (
NM_020714
)
(Zinc finger protein 490;)
genome : 12,686,920 - 12,721,623 (34,704)
query : 1 - 6,098 (6,098/6,098)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 17.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225820)
HIX0225820
HIT000000914
(
AB033024
)
(Zinc finger protein 490;)
genome : 12,686,920 - 12,721,617 (34,698)
query : 1 - 6,090 (6,090/6,090)
5 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225820)
HIX0225820
HIT000119057 (
ENST00000311437
)
(Zinc finger protein 490;)
genome : 12,688,775 - 12,721,617 (32,843)
query : 1 - 4,237 (4,237/4,237)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225820)
HIX0225820
HIT000512840 (
ENST00000414906
)
(Zinc finger protein 627.)
genome : 12,692,121 - 12,721,617 (29,497)
query : 1 - 996 (996/996)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225820)
HIX0225820
HIT000538300 (
ENST00000440366
)
(Zinc finger protein 490.)
genome : 12,692,337 - 12,708,125 (15,789)
query : 1 - 553 (553/553)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225820)
HIX0225820
HIT000570345 (
ENST00000465656
)
(Uncharacterized protein C9orf85;)
genome : 12,694,299 - 12,750,912 (56,614)
query : 1 - 533 (533/533)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 8.5, cyto_nucl 8.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225820)
HIX0039943
HIT000135955 (
ENST00000343325
)
(Zinc finger protein 791.)
genome : 12,721,732 - 12,742,735 (21,004)
query : 1 - 4,554 (4,554/4,554)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039943)
HIX0039943
HIT000214315 (
NM_153358
)
(Zinc finger protein 791.)
genome : 12,721,732 - 12,740,676 (18,945)
query : 1 - 2,495 (2,495/2,495)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039943)
HIX0039943
HIT000426641
(
AK307775
)
(Zinc finger protein 433.)
genome : 12,721,732 - 12,740,461 (18,730)
query : 1 - 2,220 (2,220/2,220)
3 exons
identity = 0.999
5'(0.994;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039943)
HIX0039943
HIT000544099 (
ENST00000446165
)
(Zinc finger protein 433.)
genome : 12,721,732 - 12,740,461 (18,730)
query : 1 - 2,219 (2,219/2,219)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039943)
HIX0039943
HIT000493221
(
AK298597
)
Representative transcript
(Zinc finger protein 791.)
genome : 12,721,734 - 12,740,329 (18,596)
query : 1 - 2,286 (2,286/2,286)
5 exons
identity = 0.999
5'(1.000;0.986;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039943)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC100354
Gallus
sp. (Chicken) : CR385187
Pongo
sp. (Orangutan) : CR857542
Monodelphis
sp. (Opossum) : ENSMODT00000032074
Pan
sp. (Chimpanzee) : ENSPTRT00000019403
Rattus
sp. (Rat) : ENSRNOT00000037766
Macaca
sp. (Macaque) : XM_001107397
Equus
sp. (Horse) : XM_001490180
HIX0039943
HIT000556056 (
ENST00000458122
)
(Zinc finger protein 791.)
genome : 12,721,734 - 12,740,329 (18,596)
query : 1 - 2,286 (2,286/2,286)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039943)
HIX0039943
HIT000709995 (
ENST00000598225
)
(Zinc finger protein 791.)
genome : 12,721,734 - 12,738,796 (17,063)
query : 1 - 704 (704/704)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039943)
HIX0039943
HIT000709467 (
ENST00000597691
)
(Zinc finger protein 791.)
genome : 12,721,734 - 12,738,619 (16,886)
query : 1 - 576 (576/576)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 8, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039943)
HIX0039943
HIT000081912
(
AK074877
)
(Zinc finger protein 791.)
genome : 12,721,753 - 12,740,676 (18,924)
query : 1 - 2,476 (2,476/2,476)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039943)
HIX0039943
HIT000492339
(
AK297715
)
(Zinc finger protein 791.)
genome : 12,721,768 - 12,740,259 (18,492)
query : 1 - 1,915 (1,915/1,915)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 15, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039943)
HIX0039943
HIT000639083 (
ENST00000540038
)
(Zinc finger protein 791.)
genome : 12,721,768 - 12,740,259 (18,492)
query : 1 - 1,915 (1,915/1,915)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 15, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039943)
HIX0039943
HIT000712494 (
ENST00000600752
)
(Zinc finger protein 490.)
genome : 12,721,768 - 12,738,920 (17,153)
query : 1 - 576 (576/576)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039943)
HIX0039943
HIT000601613 (
ENST00000498389
)
(Conserved hypothetical protein.)
genome : 12,721,772 - 12,723,208 (1,437)
query : 1 - 294 (294/294)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, extr 11, cyto_nucl 9.5, nucl 5.5,
extr_plas 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039943)
HIX0039943
HIT000338575
(
BC106937
)
(Zinc finger protein 791.)
genome : 12,721,798 - 12,740,166 (18,369)
query : 1 - 1,919 (1,919/1,920)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039943)
HIX0039943
HIT000338576
(
BC106938
)
(Zinc finger protein 791.)
genome : 12,721,799 - 12,740,166 (18,368)
query : 1 - 1,918 (1,918/1,919)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039943)
HIX0174303
HIT000061824
(
AF006199
)
(Zinc finger protein 791.)
genome : 12,739,815 - 12,741,238 (1,424)
query : 1 - 1,435 (1,435/1,438)
1 exon
identity = 0.983
3'(0.983)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 10, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174303)
HIX0174303
HIT000063261
(
AF035364
)
Representative transcript
(Zinc finger protein 77.)
genome : 12,739,815 - 12,741,238 (1,424)
query : 1 - 1,373 (1,373/1,376)
2 exons
identity = 0.981
3'(0.978;0.985)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 10, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174303)
HIX0202878
HIT000706734_01 (
ENST00000594935
)
(60S ribosomal protein L10; Laminin receptor homolog; Protein QM; Tumor suppressor QM;)
genome : 12,754,026 - 12,754,773 (748)
query : 1 - 585 (585/585)
2 exons
identity = 0.979
3'(0.986;0.976)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 10, cyto 3, mito 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202878)
HIX0202878
HIT000049853_02
(
AK130582
)
Representative transcript
(60S ribosomal protein L10; Laminin receptor homolog; Protein QM; Tumor suppressor QM;)
genome : 12,754,031 - 12,754,774 (744)
query : 1 - 744 (744/744)
1 exon
identity = 0.989
3'(0.989)5'
coverage = 1.000
InterPro :
IPR001197 : Ribosomal protein L10e
IPR016180 : Ribosomal protein L10e/L16
IPR018255 : Ribosomal protein L10e, conserved site
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 13, cyto_nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202878)
Ortholog candidate ( ->
Evola
)
Tetraodon
sp. (Tetraodon) : CR717491
Takifugu
sp. (Fugu) : SINFRUT00000144352
Rattus
sp. (Rat) : XM_001055755
Bos
sp. (Cow) : XM_001250658
Monodelphis
sp. (Opossum) : XM_001363433
Pan
sp. (Chimpanzee) : XR_025057
Mus
sp. (Mouse) : XR_034211
HIX0202878
HIT000196103_02
(
M64241
)
(60S ribosomal protein L10; Laminin receptor homolog; Protein QM; Tumor suppressor QM;)
genome : 12,754,031 - 12,754,774 (744)
query : 1 - 744 (744/744)
1 exon
identity = 0.989
3'(0.989)5'
coverage = 1.000
InterPro :
IPR001197 : Ribosomal protein L10e
IPR016180 : Ribosomal protein L10e/L16
IPR018255 : Ribosomal protein L10e, conserved site
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 13, cyto_nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202878)
HIX0202878
HIT000505455_03 (
ENST00000406049
)
(60S ribosomal protein L10; Laminin receptor homolog; Protein QM; Tumor suppressor QM;)
genome : 12,754,031 - 12,754,773 (743)
query : 1 - 743 (743/743)
1 exon
identity = 0.977
3'(0.977)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202878)
HIX0202878
HIT000709260_01 (
ENST00000597481
)
(60S ribosomal protein L10; Laminin receptor homolog; Protein QM; Tumor suppressor QM;)
genome : 12,754,034 - 12,754,711 (678)
query : 71 - 748 (678/748)
1 exon
identity = 0.990
3'(0.990)5'
coverage = 0.906
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202878)
HIX0202878
HIT000124062 (
ENST00000325000
)
(60S ribosomal protein L10; Laminin receptor homolog; Protein QM; Tumor suppressor QM;)
genome : 12,754,089 - 12,754,733 (645)
query : 1 - 645 (645/645)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 13, cyto_nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202878)
HIX0202878
HIT000621844_02 (
ENST00000522551
)
(60S ribosomal protein L10; Laminin receptor homolog; Protein QM; Tumor suppressor QM;)
genome : 12,754,089 - 12,754,733 (645)
query : 1 - 645 (645/645)
1 exon
identity = 0.981
3'(0.981)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202878)
HIX0202878
HIT000706452_01 (
ENST00000594651
)
(60S ribosomal protein L10; Laminin receptor homolog; Protein QM; Tumor suppressor QM;)
genome : 12,754,132 - 12,754,774 (643)
query : 11 - 657 (647/657)
1 exon
identity = 0.985
3'(0.985)5'
coverage = 0.985
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 13, cyto_nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202878)
HIX0202878
HIT000101239_05
(
D28410
)
(Non-protein coding transcript.)
genome : 12,754,728 - 12,754,774 (47)
query : 1 - 47 (47/47)
1 exon
identity = 0.979
3'(0.979)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202878)
HIX0014793
HIT000217586
(
U05572
)
Representative transcript
(Lysosomal alpha-mannosidase; Laman; EC=3.2.1.24; Lysosomal acid alpha-mannosidase; Mannosidase alpha class 2B member 1; Mannosidase alpha-B; Contains: Lysosomal alpha-mannosidase A peptide; Contains: Lysosomal alpha-mannosidase B peptide; Contains: Lysosomal alpha-mannosidase C peptide; Contains: Lysosomal alpha-mannosidase D peptide; Contains: Lysosomal alpha-mannosidase E peptide; Precursor;)
genome : 12,757,330 - 12,777,548 (20,219)
query : 1 - 3,170 (3,170/3,199)
24 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.990;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.995)5'
coverage = 0.991
EC number :
EC 3.2.1.24
KEGG pathway :
00511 : Other glycan degradation (9)
InterPro :
IPR000602 : Glycoside hydrolase family 38, N-terminal domain
IPR011013 : Galactose mutarotase-like domain
IPR011330 : Glycoside hydrolase/deacetylase, beta/alpha-barrel
IPR011682 : Glycosyl hydrolase family 38, C-terminal
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR015341 : Glycoside hydrolase, family 38, central domain
IPR027291 : Glycoside hydrolase 38/57, N-terminal domain
IPR028995 : Glycoside hydrolase, families 57/38, central domain
GO :
0003824 : Molecular Function : catalytic activity
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0004559 : Molecular Function : alpha-mannosidase activity
0005975 : Biological Process : carbohydrate metabolic process
0006013 : Biological Process : mannose metabolic process
0008270 : Molecular Function : zinc ion binding
0015923 : Molecular Function : mannosidase activity
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, mito 6, lyso 6, E.R. 4, mito_pero 4,
mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK035551
Rattus
sp. (Rat) : BC061819
Danio
sp. (Zebrafish) : BC091843
Pongo
sp. (Orangutan) : CR859157
Tetraodon
sp. (Tetraodon) : GSTENT00034796001
Bos
sp. (Cow) : L31373
Takifugu
sp. (Fugu) : SINFRUT00000173406
Monodelphis
sp. (Opossum) : XM_001363390
Equus
sp. (Horse) : XM_001914984
Canis
sp. (Dog) : XM_542048
Macaca
sp. (Macaque) : XR_013439
Pan
sp. (Chimpanzee) : XR_025057
HIX0014793
HIT000655060 (
NM_001173498
)
(Lysosomal alpha-mannosidase; Laman; EC=3.2.1.24; Lysosomal acid alpha-mannosidase; Mannosidase alpha class 2B member 1; Mannosidase alpha-B; Contains: Lysosomal alpha-mannosidase A peptide; Contains: Lysosomal alpha-mannosidase B peptide; Contains: Lysosomal alpha-mannosidase C peptide; Contains: Lysosomal alpha-mannosidase D peptide; Contains: Lysosomal alpha-mannosidase E peptide; Precursor;)
genome : 12,757,322 - 12,777,591 (20,270)
query : 1 - 3,221 (3,221/3,239)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.24
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, mito 6, lyso 6, E.R. 4, mito_pero 4,
mito_nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014793
HIT000029880
(
BC000736
)
(Lysosomal alpha-mannosidase; Laman; EC=3.2.1.24; Lysosomal acid alpha-mannosidase; Mannosidase alpha class 2B member 1; Mannosidase alpha-B; Contains: Lysosomal alpha-mannosidase A peptide; Contains: Lysosomal alpha-mannosidase B peptide; Contains: Lysosomal alpha-mannosidase C peptide; Contains: Lysosomal alpha-mannosidase D peptide; Contains: Lysosomal alpha-mannosidase E peptide; Precursor;)
genome : 12,757,326 - 12,777,537 (20,212)
query : 1 - 3,166 (3,166/3,183)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.24
KEGG pathway :
00511 : Other glycan degradation (9)
InterPro :
IPR000602 : Glycoside hydrolase family 38, N-terminal domain
IPR011013 : Galactose mutarotase-like domain
IPR011330 : Glycoside hydrolase/deacetylase, beta/alpha-barrel
IPR011682 : Glycosyl hydrolase family 38, C-terminal
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR015341 : Glycoside hydrolase, family 38, central domain
IPR027291 : Glycoside hydrolase 38/57, N-terminal domain
IPR028995 : Glycoside hydrolase, families 57/38, central domain
GO :
0003824 : Molecular Function : catalytic activity
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0004559 : Molecular Function : alpha-mannosidase activity
0005975 : Biological Process : carbohydrate metabolic process
0006013 : Biological Process : mannose metabolic process
0008270 : Molecular Function : zinc ion binding
0015923 : Molecular Function : mannosidase activity
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, mito 6, lyso 6, E.R. 4, mito_pero 4,
mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014793
HIT000220629
(
U60266
)
(Lysosomal alpha-mannosidase; Laman; EC=3.2.1.24; Lysosomal acid alpha-mannosidase; Mannosidase alpha class 2B member 1; Mannosidase alpha-B; Contains: Lysosomal alpha-mannosidase A peptide; Contains: Lysosomal alpha-mannosidase B peptide; Contains: Lysosomal alpha-mannosidase C peptide; Contains: Lysosomal alpha-mannosidase D peptide; Contains: Lysosomal alpha-mannosidase E peptide; Precursor;)
genome : 12,757,331 - 12,777,529 (20,199)
query : 1 - 3,151 (3,151/3,172)
24 exons
identity = 0.999
3'(0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.990;
1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 3.2.1.24
KEGG pathway :
00511 : Other glycan degradation (9)
InterPro :
IPR000602 : Glycoside hydrolase family 38, N-terminal domain
IPR011013 : Galactose mutarotase-like domain
IPR011330 : Glycoside hydrolase/deacetylase, beta/alpha-barrel
IPR011682 : Glycosyl hydrolase family 38, C-terminal
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR015341 : Glycoside hydrolase, family 38, central domain
IPR027291 : Glycoside hydrolase 38/57, N-terminal domain
IPR028995 : Glycoside hydrolase, families 57/38, central domain
GO :
0003824 : Molecular Function : catalytic activity
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0004559 : Molecular Function : alpha-mannosidase activity
0005975 : Biological Process : carbohydrate metabolic process
0006013 : Biological Process : mannose metabolic process
0008270 : Molecular Function : zinc ion binding
0015923 : Molecular Function : mannosidase activity
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, mito 6, lyso 6, E.R. 4, mito_pero 4,
mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014793
HIT000197563 (
NM_000528
)
(Lysosomal alpha-mannosidase; Laman; EC=3.2.1.24; Lysosomal acid alpha-mannosidase; Mannosidase alpha class 2B member 1; Mannosidase alpha-B; Contains: Lysosomal alpha-mannosidase A peptide; Contains: Lysosomal alpha-mannosidase B peptide; Contains: Lysosomal alpha-mannosidase C peptide; Contains: Lysosomal alpha-mannosidase D peptide; Contains: Lysosomal alpha-mannosidase E peptide; Precursor;)
genome : 12,757,322 - 12,777,591 (20,270)
query : 1 - 3,224 (3,224/3,231)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.998
EC number :
EC 3.2.1.24
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, mito 6, lyso 6, E.R. 4, mito_pero 4,
mito_nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014793
HIT000573946 (
ENST00000469423
)
(Lysosomal alpha-mannosidase; Laman; EC=3.2.1.24; Lysosomal acid alpha-mannosidase; Mannosidase alpha class 2B member 1; Mannosidase alpha-B; Contains: Lysosomal alpha-mannosidase A peptide; Contains: Lysosomal alpha-mannosidase B peptide; Contains: Lysosomal alpha-mannosidase C peptide; Contains: Lysosomal alpha-mannosidase D peptide; Contains: Lysosomal alpha-mannosidase E peptide; Precursor;)
genome : 12,757,325 - 12,758,398 (1,074)
query : 1 - 574 (574/574)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.24
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 11.5, nucl 10.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014793
HIT000424369
(
AK291572
)
(Lysosomal alpha-mannosidase; Laman; EC=3.2.1.24; Lysosomal acid alpha-mannosidase; Mannosidase alpha class 2B member 1; Mannosidase alpha-B; Contains: Lysosomal alpha-mannosidase A peptide; Contains: Lysosomal alpha-mannosidase B peptide; Contains: Lysosomal alpha-mannosidase C peptide; Contains: Lysosomal alpha-mannosidase D peptide; Contains: Lysosomal alpha-mannosidase E peptide; Precursor;)
genome : 12,757,327 - 12,777,556 (20,230)
query : 1 - 3,184 (3,184/3,184)
24 exons
identity = 0.999
3'(0.995;1.000;1.000;1.000;1.000;1.000;0.990;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.24
KEGG pathway :
00511 : Other glycan degradation (9)
InterPro :
IPR000602 : Glycoside hydrolase family 38, N-terminal domain
IPR011013 : Galactose mutarotase-like domain
IPR011330 : Glycoside hydrolase/deacetylase, beta/alpha-barrel
IPR011682 : Glycosyl hydrolase family 38, C-terminal
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR015341 : Glycoside hydrolase, family 38, central domain
IPR027291 : Glycoside hydrolase 38/57, N-terminal domain
IPR028995 : Glycoside hydrolase, families 57/38, central domain
GO :
0003824 : Molecular Function : catalytic activity
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0004559 : Molecular Function : alpha-mannosidase activity
0005975 : Biological Process : carbohydrate metabolic process
0006013 : Biological Process : mannose metabolic process
0008270 : Molecular Function : zinc ion binding
0015923 : Molecular Function : mannosidase activity
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, mito 6, lyso 6, E.R. 4, mito_pero 4,
mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014793
HIT000498042
(
AK303418
)
(Lysosomal alpha-mannosidase; Laman; EC=3.2.1.24; Lysosomal acid alpha-mannosidase; Mannosidase alpha class 2B member 1; Mannosidase alpha-B; Precursor;)
genome : 12,757,327 - 12,777,556 (20,230)
query : 1 - 3,158 (3,158/3,158)
24 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.910)5'
coverage = 1.000
EC number :
EC 3.2.1.24
KEGG pathway :
00511 : Other glycan degradation (9)
InterPro :
IPR000602 : Glycoside hydrolase family 38, N-terminal domain
IPR011013 : Galactose mutarotase-like domain
IPR011330 : Glycoside hydrolase/deacetylase, beta/alpha-barrel
IPR011682 : Glycosyl hydrolase family 38, C-terminal
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR015341 : Glycoside hydrolase, family 38, central domain
IPR027291 : Glycoside hydrolase 38/57, N-terminal domain
IPR028995 : Glycoside hydrolase, families 57/38, central domain
GO :
0003824 : Molecular Function : catalytic activity
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0004559 : Molecular Function : alpha-mannosidase activity
0005975 : Biological Process : carbohydrate metabolic process
0006013 : Biological Process : mannose metabolic process
0008270 : Molecular Function : zinc ion binding
0015923 : Molecular Function : mannosidase activity
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13, nucl 8.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014793
HIT000554869 (
ENST00000456935
)
(Lysosomal alpha-mannosidase; Laman; EC=3.2.1.24; Lysosomal acid alpha-mannosidase; Mannosidase alpha class 2B member 1; Mannosidase alpha-B; Contains: Lysosomal alpha-mannosidase A peptide; Contains: Lysosomal alpha-mannosidase B peptide; Contains: Lysosomal alpha-mannosidase C peptide; Contains: Lysosomal alpha-mannosidase D peptide; Contains: Lysosomal alpha-mannosidase E peptide; Precursor;)
genome : 12,757,327 - 12,777,556 (20,230)
query : 1 - 3,184 (3,184/3,184)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.24
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, mito 6, lyso 6, E.R. 4, mito_pero 4,
mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014793
HIT000329856
(
AB209921
)
(Lysosomal alpha-mannosidase; Laman; EC=3.2.1.24; Lysosomal acid alpha-mannosidase; Mannosidase alpha class 2B member 1; Mannosidase alpha-B; Contains: Lysosomal alpha-mannosidase A peptide; Contains: Lysosomal alpha-mannosidase B peptide; Contains: Lysosomal alpha-mannosidase C peptide; Contains: Lysosomal alpha-mannosidase D peptide; Contains: Lysosomal alpha-mannosidase E peptide; Precursor;)
genome : 12,757,327 - 12,777,503 (20,177)
query : 1 - 3,131 (3,131/3,131)
24 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.983;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.24
KEGG pathway :
00511 : Other glycan degradation (9)
InterPro :
IPR000602 : Glycoside hydrolase family 38, N-terminal domain
IPR011013 : Galactose mutarotase-like domain
IPR011330 : Glycoside hydrolase/deacetylase, beta/alpha-barrel
IPR011682 : Glycosyl hydrolase family 38, C-terminal
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR015341 : Glycoside hydrolase, family 38, central domain
IPR027291 : Glycoside hydrolase 38/57, N-terminal domain
IPR028995 : Glycoside hydrolase, families 57/38, central domain
GO :
0003824 : Molecular Function : catalytic activity
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0004559 : Molecular Function : alpha-mannosidase activity
0005975 : Biological Process : carbohydrate metabolic process
0006013 : Biological Process : mannose metabolic process
0008270 : Molecular Function : zinc ion binding
0015923 : Molecular Function : mannosidase activity
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, lyso 7, mito 5, E.R. 5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014793
HIT000596665 (
ENST00000493218
)
(Lysosomal alpha-mannosidase; Laman; EC=3.2.1.24; Lysosomal acid alpha-mannosidase; Mannosidase alpha class 2B member 1; Mannosidase alpha-B; Contains: Lysosomal alpha-mannosidase A peptide; Contains: Lysosomal alpha-mannosidase B peptide; Contains: Lysosomal alpha-mannosidase C peptide; Contains: Lysosomal alpha-mannosidase D peptide; Contains: Lysosomal alpha-mannosidase E peptide; Precursor;)
genome : 12,757,327 - 12,758,487 (1,161)
query : 1 - 554 (554/554)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.24
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito_nucl 11.6667, nucl 11.5, mito 11, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014793
HIT000584843 (
ENST00000480851
)
(Conserved hypothetical protein.)
genome : 12,757,327 - 12,757,960 (634)
query : 1 - 323 (323/323)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014793
HIT000103529 (
ENST00000221363
)
(Lysosomal alpha-mannosidase; Laman; EC=3.2.1.24; Lysosomal acid alpha-mannosidase; Mannosidase alpha class 2B member 1; Mannosidase alpha-B; Contains: Lysosomal alpha-mannosidase A peptide; Contains: Lysosomal alpha-mannosidase B peptide; Contains: Lysosomal alpha-mannosidase C peptide; Contains: Lysosomal alpha-mannosidase D peptide; Contains: Lysosomal alpha-mannosidase E peptide; Precursor;)
genome : 12,757,330 - 12,777,548 (20,219)
query : 1 - 3,170 (3,170/3,170)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.24
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, mito 6, lyso 6, E.R. 4, mito_pero 4,
mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014793
HIT000221057
(
U68567
)
(Lysosomal alpha-mannosidase; Laman; EC=3.2.1.24; Lysosomal acid alpha-mannosidase; Mannosidase alpha class 2B member 1; Mannosidase alpha-B; Contains: Lysosomal alpha-mannosidase A peptide; Contains: Lysosomal alpha-mannosidase B peptide; Contains: Lysosomal alpha-mannosidase C peptide; Contains: Lysosomal alpha-mannosidase D peptide; Contains: Lysosomal alpha-mannosidase E peptide; Precursor;)
genome : 12,757,375 - 12,777,499 (20,125)
query : 6 - 3,084 (3,079/3,084)
24 exons
identity = 0.998
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;0.983;1.000;1.000;1.000;
1.000;1.000;0.993)5'
coverage = 0.998
EC number :
EC 3.2.1.24
KEGG pathway :
00511 : Other glycan degradation (9)
InterPro :
IPR000602 : Glycoside hydrolase family 38, N-terminal domain
IPR011013 : Galactose mutarotase-like domain
IPR011330 : Glycoside hydrolase/deacetylase, beta/alpha-barrel
IPR011682 : Glycosyl hydrolase family 38, C-terminal
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR015341 : Glycoside hydrolase, family 38, central domain
IPR027291 : Glycoside hydrolase 38/57, N-terminal domain
IPR028995 : Glycoside hydrolase, families 57/38, central domain
GO :
0003824 : Molecular Function : catalytic activity
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0004559 : Molecular Function : alpha-mannosidase activity
0005975 : Biological Process : carbohydrate metabolic process
0006013 : Biological Process : mannose metabolic process
0008270 : Molecular Function : zinc ion binding
0015923 : Molecular Function : mannosidase activity
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, lyso 7, mito 5, pero 3, golg 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014793
HIT000221047
(
U68382
)
(Lysosomal alpha-mannosidase; Laman; EC=3.2.1.24; Lysosomal acid alpha-mannosidase; Mannosidase alpha class 2B member 1; Mannosidase alpha-B; Contains: Lysosomal alpha-mannosidase A peptide; Contains: Lysosomal alpha-mannosidase B peptide; Contains: Lysosomal alpha-mannosidase C peptide; Contains: Lysosomal alpha-mannosidase D peptide; Contains: Lysosomal alpha-mannosidase E peptide; Precursor;)
genome : 12,757,375 - 12,777,497 (20,123)
query : 1 - 3,685 (3,685/3,685)
22 exons
identity = 0.999
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.999;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;1.000;
0.993)5'
coverage = 1.000
EC number :
EC 3.2.1.24
KEGG pathway :
00511 : Other glycan degradation (9)
InterPro :
IPR000602 : Glycoside hydrolase family 38, N-terminal domain
IPR011330 : Glycoside hydrolase/deacetylase, beta/alpha-barrel
IPR027291 : Glycoside hydrolase 38/57, N-terminal domain
GO :
0003824 : Molecular Function : catalytic activity
0004559 : Molecular Function : alpha-mannosidase activity
0005975 : Biological Process : carbohydrate metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, lyso 4, mito 3, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014793
HIT000571424 (
ENST00000466794
)
(Lysosomal alpha-mannosidase; Laman; EC=3.2.1.24; Lysosomal acid alpha-mannosidase; Mannosidase alpha class 2B member 1; Mannosidase alpha-B; Contains: Lysosomal alpha-mannosidase A peptide; Contains: Lysosomal alpha-mannosidase B peptide; Contains: Lysosomal alpha-mannosidase C peptide; Contains: Lysosomal alpha-mannosidase D peptide; Contains: Lysosomal alpha-mannosidase E peptide; Precursor;)
genome : 12,757,375 - 12,777,497 (20,123)
query : 1 - 3,685 (3,685/3,685)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.24
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 13, cyto 13, extr 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014793
HIT000708379 (
ENST00000596591
)
(Lysosomal alpha-mannosidase; Laman; EC=3.2.1.24; Lysosomal acid alpha-mannosidase; Mannosidase alpha class 2B member 1; Mannosidase alpha-B; Contains: Lysosomal alpha-mannosidase A peptide; Contains: Lysosomal alpha-mannosidase B peptide; Contains: Lysosomal alpha-mannosidase C peptide; Contains: Lysosomal alpha-mannosidase D peptide; Contains: Lysosomal alpha-mannosidase E peptide; Precursor;)
genome : 12,763,006 - 12,766,697 (3,692)
query : 5 - 340 (336/340)
3 exons
identity = 0.997
3'(1.000;1.000;0.995)5'
coverage = 0.988
EC number :
EC 3.2.1.24
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 5, mito 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014793
HIT000707671 (
ENST00000595880
)
(Lysosomal alpha-mannosidase; Laman; EC=3.2.1.24; Lysosomal acid alpha-mannosidase; Mannosidase alpha class 2B member 1; Mannosidase alpha-B; Contains: Lysosomal alpha-mannosidase A peptide; Contains: Lysosomal alpha-mannosidase B peptide; Contains: Lysosomal alpha-mannosidase C peptide; Contains: Lysosomal alpha-mannosidase D peptide; Contains: Lysosomal alpha-mannosidase E peptide; Precursor;)
genome : 12,763,013 - 12,767,873 (4,861)
query : 14 - 597 (584/597)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.978
EC number :
EC 3.2.1.24
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 6.5, cyto 4.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014793
HIT000531447 (
ENST00000433513
)
(Lysosomal alpha-mannosidase; Laman; EC=3.2.1.24; Lysosomal acid alpha-mannosidase; Mannosidase alpha class 2B member 1; Mannosidase alpha-B; Contains: Lysosomal alpha-mannosidase A peptide; Contains: Lysosomal alpha-mannosidase B peptide; Contains: Lysosomal alpha-mannosidase C peptide; Contains: Lysosomal alpha-mannosidase D peptide; Contains: Lysosomal alpha-mannosidase E peptide; Precursor;)
genome : 12,763,059 - 12,768,049 (4,991)
query : 1 - 560 (560/560)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.24
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 6, nucl 3.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014793
HIT000705497 (
ENST00000593686
)
(Lysosomal alpha-mannosidase; Laman; EC=3.2.1.24; Lysosomal acid alpha-mannosidase; Mannosidase alpha class 2B member 1; Mannosidase alpha-B; Contains: Lysosomal alpha-mannosidase A peptide; Contains: Lysosomal alpha-mannosidase B peptide; Contains: Lysosomal alpha-mannosidase C peptide; Contains: Lysosomal alpha-mannosidase D peptide; Contains: Lysosomal alpha-mannosidase E peptide; Precursor;)
genome : 12,763,174 - 12,768,288 (5,115)
query : 1 - 524 (524/537)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.976
EC number :
EC 3.2.1.24
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 7, extr_plas 7, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014793
HIT000598977 (
ENST00000495617
)
(Lysosomal alpha-mannosidase; Laman; EC=3.2.1.24; Lysosomal acid alpha-mannosidase; Mannosidase alpha class 2B member 1; Mannosidase alpha-B; Contains: Lysosomal alpha-mannosidase A peptide; Contains: Lysosomal alpha-mannosidase B peptide; Contains: Lysosomal alpha-mannosidase C peptide; Contains: Lysosomal alpha-mannosidase D peptide; Contains: Lysosomal alpha-mannosidase E peptide; Precursor;)
genome : 12,767,473 - 12,769,824 (2,352)
query : 1 - 732 (732/732)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.24
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014793
HIT000570513 (
ENST00000465830
)
(Glycoside hydrolase, family 38, central domain containing protein.)
genome : 12,768,269 - 12,769,431 (1,163)
query : 1 - 574 (574/574)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13, cyto 11, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014793
HIT000566993 (
ENST00000462144
)
(Lysosomal alpha-mannosidase; Laman; EC=3.2.1.24; Lysosomal acid alpha-mannosidase; Mannosidase alpha class 2B member 1; Mannosidase alpha-B; Contains: Lysosomal alpha-mannosidase A peptide; Contains: Lysosomal alpha-mannosidase B peptide; Contains: Lysosomal alpha-mannosidase C peptide; Contains: Lysosomal alpha-mannosidase D peptide; Contains: Lysosomal alpha-mannosidase E peptide; Precursor;)
genome : 12,771,711 - 12,774,232 (2,522)
query : 1 - 582 (582/582)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.24
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_nucl 3, nucl 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014793
HIT000590579 (
ENST00000486847
)
(Lysosomal alpha-mannosidase; Laman; EC=3.2.1.24; Lysosomal acid alpha-mannosidase; Mannosidase alpha class 2B member 1; Mannosidase alpha-B; Contains: Lysosomal alpha-mannosidase A peptide; Contains: Lysosomal alpha-mannosidase B peptide; Contains: Lysosomal alpha-mannosidase C peptide; Contains: Lysosomal alpha-mannosidase D peptide; Contains: Lysosomal alpha-mannosidase E peptide; Precursor;)
genome : 12,774,249 - 12,777,556 (3,308)
query : 1 - 535 (535/535)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.24
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014793
HIT000708300 (
ENST00000596512
)
(Lysosomal alpha-mannosidase; Laman; EC=3.2.1.24; Lysosomal acid alpha-mannosidase; Mannosidase alpha class 2B member 1; Mannosidase alpha-B; Contains: Lysosomal alpha-mannosidase A peptide; Contains: Lysosomal alpha-mannosidase B peptide; Contains: Lysosomal alpha-mannosidase C peptide; Contains: Lysosomal alpha-mannosidase D peptide; Contains: Lysosomal alpha-mannosidase E peptide; Precursor;)
genome : 12,775,618 - 12,777,556 (1,939)
query : 1 - 556 (556/556)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.24
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, extr_plas 16, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014793
HIT000710639 (
ENST00000598876
)
(Lysosomal alpha-mannosidase; Laman; EC=3.2.1.24; Lysosomal acid alpha-mannosidase; Mannosidase alpha class 2B member 1; Mannosidase alpha-B; Contains: Lysosomal alpha-mannosidase A peptide; Contains: Lysosomal alpha-mannosidase B peptide; Contains: Lysosomal alpha-mannosidase C peptide; Contains: Lysosomal alpha-mannosidase D peptide; Contains: Lysosomal alpha-mannosidase E peptide; Precursor;)
genome : 12,775,747 - 12,777,550 (1,804)
query : 1 - 551 (551/551)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.24
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014793
HIT000712026 (
ENST00000600281
)
(Lysosomal alpha-mannosidase; Laman; EC=3.2.1.24; Lysosomal acid alpha-mannosidase; Mannosidase alpha class 2B member 1; Mannosidase alpha-B; Contains: Lysosomal alpha-mannosidase A peptide; Contains: Lysosomal alpha-mannosidase B peptide; Contains: Lysosomal alpha-mannosidase C peptide; Contains: Lysosomal alpha-mannosidase D peptide; Contains: Lysosomal alpha-mannosidase E peptide; Precursor;)
genome : 12,776,060 - 12,777,556 (1,497)
query : 1 - 583 (583/583)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.24
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, mito 6, plas 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014793)
HIX0014795
HIT000516477 (
ENST00000418543
)
(WD repeat domain-containing protein 83; Mitogen-activated protein kinase organizer 1; MAPK organizer 1;)
genome : 12,777,614 - 12,786,646 (9,033)
query : 1 - 1,457 (1,457/1,457)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 8, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014795)
HIX0014795
HIT000660967 (
ENST00000546754
)
(WD repeat domain-containing protein 83; Mitogen-activated protein kinase organizer 1; MAPK organizer 1;)
genome : 12,777,616 - 12,786,605 (8,990)
query : 1 - 1,480 (1,480/1,480)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10, extr 9, nucl 8, cyto_mito 8, cyto 7.5,
mito 6.5, cyto_pero 5.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014795)
HIX0014795
HIT000485433 (
NM_001099737
)
(WD repeat domain-containing protein 83; Mitogen-activated protein kinase organizer 1; MAPK organizer 1;)
genome : 12,777,618 - 12,786,646 (9,029)
query : 1 - 1,453 (1,453/1,476)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 8, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014795)
HIX0014795
HIT000657890 (
NR_029375
)
(WD repeat domain-containing protein 83; Mitogen-activated protein kinase organizer 1; MAPK organizer 1;)
genome : 12,777,618 - 12,786,646 (9,029)
query : 1 - 1,436 (1,436/1,459)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014795)
HIX0014795
HIT000081560
(
AK074525
)
(WD repeat domain-containing protein 83; Mitogen-activated protein kinase organizer 1; MAPK organizer 1;)
genome : 12,777,628 - 12,786,645 (9,018)
query : 1 - 1,425 (1,425/1,425)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014795)
HIX0014795
HIT000662390 (
ENST00000548381
)
(WD repeat domain-containing protein 83; Mitogen-activated protein kinase organizer 1; MAPK organizer 1;)
genome : 12,777,628 - 12,786,645 (9,018)
query : 1 - 1,425 (1,425/1,425)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014795)
HIX0014795
HIT000433030
(
AK314164
)
Representative transcript
(WD repeat domain-containing protein 83; Mitogen-activated protein kinase organizer 1; MAPK organizer 1;)
genome : 12,777,642 - 12,786,486 (8,845)
query : 2 - 1,270 (1,269/1,270)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 8, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014795)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AY365434
Rattus
sp. (Rat) : AY940050
Danio
sp. (Zebrafish) : BC076138
Bos
sp. (Cow) : BC120088
Canis
sp. (Dog) : ENSCAFT00000027316
Equus
sp. (Horse) : ENSECAT00000021070
Pongo
sp. (Orangutan) : ENSPPYT00000011185
Tetraodon
sp. (Tetraodon) : GSTENT00011970001
Takifugu
sp. (Fugu) : SINFRUT00000146743
Macaca
sp. (Macaque) : XM_001108218
Monodelphis
sp. (Opossum) : XM_001363306
Pan
sp. (Chimpanzee) : XR_022143
HIX0014795
HIT000666577 (
ENST00000553179
)
(WD repeat domain-containing protein 83; Mitogen-activated protein kinase organizer 1; MAPK organizer 1;)
genome : 12,777,644 - 12,783,932 (6,289)
query : 1 - 1,031 (1,031/1,039)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014795)
HIX0014794
HIT000097417
(
BC042919
)
(Protein Asterix; WD repeat domain 83 opposite strand; WDR83 opposite strand;)
genome : 12,778,885 - 12,780,234 (1,350)
query : 1 - 626 (626/661)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR005351 : Uncharacterised protein family UPF0139
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, cyto_nucl 9.83333, nucl 9.5, cyto 7,
cyto_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014794)
HIX0014794
HIT000066295
(
AF078861
)
(Protein Asterix; WD repeat domain 83 opposite strand; WDR83 opposite strand;)
genome : 12,778,887 - 12,780,449 (1,563)
query : 2 - 840 (839/870)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR005351 : Uncharacterised protein family UPF0139
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, cyto_nucl 9.83333, nucl 9.5, cyto 7,
cyto_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014794)
HIX0014794
HIT000085970
(
BC001192
)
(Protein Asterix.)
genome : 12,778,885 - 12,780,213 (1,329)
query : 1 - 605 (605/626)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR005351 : Uncharacterised protein family UPF0139
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, nucl 6.5, cyto_nucl 6, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014794)
HIX0014794
HIT000071711
(
AF151898
)
(Protein Asterix; WD repeat domain 83 opposite strand; WDR83 opposite strand;)
genome : 12,778,887 - 12,780,449 (1,563)
query : 1 - 839 (839/858)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.978
InterPro :
IPR005351 : Uncharacterised protein family UPF0139
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, cyto_nucl 9.83333, nucl 9.5, cyto 7,
cyto_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014794)
HIX0014794
HIT000260264
(
BC061912
)
(Protein Asterix; WD repeat domain 83 opposite strand; WDR83 opposite strand;)
genome : 12,778,887 - 12,780,234 (1,348)
query : 1 - 624 (624/639)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR005351 : Uncharacterised protein family UPF0139
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, cyto_nucl 9.83333, nucl 9.5, cyto 7,
cyto_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014794)
HIX0014794
HIT000205906 (
NM_016145
)
(Protein Asterix; WD repeat domain 83 opposite strand; WDR83 opposite strand;)
genome : 12,778,881 - 12,780,465 (1,585)
query : 1 - 861 (861/861)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, cyto_nucl 9.83333, nucl 9.5, cyto 7,
cyto_pero 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014794)
HIX0014794
HIT000015897
(
AK091030
)
Representative transcript
(Protein Asterix; WD repeat domain 83 opposite strand; WDR83 opposite strand;)
genome : 12,778,885 - 12,782,170 (3,286)
query : 1 - 2,562 (2,562/2,562)
4 exons
identity = 0.998
3'(1.000;1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR005351 : Uncharacterised protein family UPF0139
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, cyto_nucl 9.83333, nucl 9.5, cyto 7,
cyto_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014794)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK147129
Danio
sp. (Zebrafish) : BC059477
Bos
sp. (Cow) : BC111635
Gallus
sp. (Chicken) : BX934262
Tetraodon
sp. (Tetraodon) : CR716812
Equus
sp. (Horse) : ENSECAT00000023387
Pongo
sp. (Orangutan) : ENSPPYT00000011184
Takifugu
sp. (Fugu) : SINFRUT00000146741
Rattus
sp. (Rat) : XM_001065641
Macaca
sp. (Macaque) : XM_001108322
Monodelphis
sp. (Opossum) : XM_001362575
Canis
sp. (Dog) : XM_862447
HIX0014794
HIT000708518 (
ENST00000596731
)
(Protein Asterix; WD repeat domain 83 opposite strand; WDR83 opposite strand;)
genome : 12,778,885 - 12,782,170 (3,286)
query : 1 - 2,562 (2,562/2,562)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, cyto_nucl 9.83333, nucl 9.5, cyto 7,
cyto_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014794)
HIX0014794
HIT000064846
(
AF059620
)
(Protein Asterix; WD repeat domain 83 opposite strand; WDR83 opposite strand;)
genome : 12,778,887 - 12,780,232 (1,346)
query : 2 - 623 (622/625)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.995
InterPro :
IPR005351 : Uncharacterised protein family UPF0139
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, cyto_nucl 9.83333, nucl 9.5, cyto 7,
cyto_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014794)
HIX0014794
HIT000103634 (
ENST00000222190
)
(Protein Asterix; WD repeat domain 83 opposite strand; WDR83 opposite strand;)
genome : 12,778,889 - 12,780,217 (1,329)
query : 1 - 599 (599/599)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, nucl 10.5, cyto_nucl 10.1667, cyto 6.5,
cyto_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014794)
HIX0014794
HIT000710496 (
ENST00000598732
)
(Protein Asterix.)
genome : 12,778,959 - 12,780,215 (1,257)
query : 1 - 627 (627/627)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, nucl 6, cyto 6, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014794)
HIX0014794
HIT000430810
(
AK311944
)
(Protein Asterix; WD repeat domain 83 opposite strand; WDR83 opposite strand;)
genome : 12,779,173 - 12,780,229 (1,057)
query : 1 - 333 (333/333)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005351 : Uncharacterised protein family UPF0139
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, cyto_nucl 9.83333, nucl 9.5, cyto 7,
cyto_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014794)
HIX0014795
HIT000661409 (
ENST00000547255
)
(WD repeat domain-containing protein 83; Mitogen-activated protein kinase organizer 1; MAPK organizer 1;)
genome : 12,780,367 - 12,784,119 (3,753)
query : 1 - 915 (915/915)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 9, extr_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014795)
HIX0014795
HIT000210563 (
NM_032332
)
(WD repeat domain-containing protein 83; Mitogen-activated protein kinase organizer 1; MAPK organizer 1;)
genome : 12,780,517 - 12,786,646 (6,130)
query : 1 - 1,196 (1,196/1,219)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 8, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014795)
HIX0014795
HIT000105231 (
ENST00000242796
)
(WD repeat domain-containing protein 83; Mitogen-activated protein kinase organizer 1; MAPK organizer 1;)
genome : 12,780,517 - 12,786,645 (6,129)
query : 1 - 1,195 (1,195/1,195)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 8, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014795)
HIX0014795
HIT000330975
(
AK223195
)
(WD repeat domain-containing protein 83; Mitogen-activated protein kinase organizer 1; MAPK organizer 1;)
genome : 12,780,567 - 12,786,641 (6,075)
query : 1 - 1,141 (1,141/1,157)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;0.997)3'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 9, extr 5, cyto_mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014795)
HIX0014795
HIT000661611 (
ENST00000547481
)
(WD repeat domain-containing protein 83; Mitogen-activated protein kinase organizer 1; MAPK organizer 1;)
genome : 12,780,569 - 12,784,082 (3,514)
query : 1 - 770 (770/770)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 7.5, cyto_nucl 5.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014795)
HIX0014795
HIT000664627 (
ENST00000550939
)
(WD repeat domain-containing protein 83; Mitogen-activated protein kinase organizer 1; MAPK organizer 1;)
genome : 12,780,572 - 12,781,580 (1,009)
query : 1 - 595 (595/595)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 10.5, cyto_nucl 10.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014795)
HIX0014795
HIT000664963 (
ENST00000551329
)
(WD repeat domain-containing protein 83; Mitogen-activated protein kinase organizer 1; MAPK organizer 1;)
genome : 12,780,583 - 12,783,692 (3,110)
query : 1 - 643 (643/643)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 9.5, cyto_nucl 9.5, cyto_pero 7.16667,
nucl 7, extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014795)
HIX0014795
HIT000032488
(
BC005870
)
(WD repeat domain-containing protein 83; Mitogen-activated protein kinase organizer 1; MAPK organizer 1;)
genome : 12,780,584 - 12,786,646 (6,063)
query : 1 - 1,129 (1,129/1,152)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 8, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014795)
HIX0014795
HIT000523768 (
ENST00000425834
)
(WD repeat domain-containing protein 83; Mitogen-activated protein kinase organizer 1; MAPK organizer 1;)
genome : 12,780,823 - 12,786,624 (5,802)
query : 1 - 775 (775/775)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, cyto 11, nucl 10, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014795)
HIX0014794
HIT000712437 (
ENST00000600694
)
(WD repeat domain-containing protein 83; Mitogen-activated protein kinase organizer 1; MAPK organizer 1;)
genome : 12,780,893 - 12,781,837 (945)
query : 1 - 567 (567/567)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014794)
HIX0014795
HIT000661886 (
ENST00000547797
)
(WD repeat domain-containing protein 83; Mitogen-activated protein kinase organizer 1; MAPK organizer 1;)
genome : 12,781,062 - 12,786,375 (5,314)
query : 1 - 632 (632/632)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, cyto_nucl 7.66667, cyto 7.5, nucl 6.5, mito 6,
cyto_pero 5.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014795)
HIX0014795
HIT000666156 (
ENST00000552700
)
(WD repeat domain-containing protein 83; Mitogen-activated protein kinase organizer 1; MAPK organizer 1;)
genome : 12,783,087 - 12,786,378 (3,292)
query : 1 - 908 (908/908)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 11.1667, nucl 10.5, extr 9, cyto 8.5,
cyto_pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014795)
HIX0226136
HIT000710015 (
ENST00000598246
)
(Deoxyhypusine synthase family protein.)
genome : 12,786,531 - 12,790,334 (3,804)
query : 1 - 553 (553/553)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 14, nucl 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226136)
HIX0226136
HIT000712382 (
ENST00000600639
)
(Conserved hypothetical protein.)
genome : 12,786,535 - 12,786,886 (352)
query : 1 - 285 (285/285)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12.5, extr 11, cyto_mito 9.66667, cyto_nucl 5.5,
cyto 5, cyto_pero 4.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226136)
HIX0226136
HIT000712606 (
ENST00000600864
)
(Deoxyhypusine synthase family protein.)
genome : 12,786,536 - 12,790,354 (3,819)
query : 1 - 464 (464/464)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13.5, mito 6, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226136)
HIX0226136
HIT000712253 (
ENST00000600510
)
(Conserved hypothetical protein.)
genome : 12,786,565 - 12,787,732 (1,168)
query : 1 - 1,085 (1,085/1,085)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, nucl 9.5, cyto_nucl 8.16667, mito 6,
cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226136)
HIX0226065
HIT000711236 (
ENST00000599481
)
(Deoxyhypusine synthase family protein.)
genome : 12,790,439 - 12,791,975 (1,537)
query : 1 - 476 (476/476)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cysk 11, cyto_nucl 9.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226065)
HIX0226065
HIT000705237 (
ENST00000593423
)
(Deoxyhypusine synthase family protein.)
genome : 12,790,471 - 12,792,025 (1,555)
query : 1 - 540 (540/540)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cysk 12, cyto_nucl 8.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226065)
HIX0226065
HIT000706898 (
ENST00000595100
)
(Deoxyhypusine synthase family protein.)
genome : 12,790,596 - 12,792,652 (2,057)
query : 1 - 596 (596/603)
3 exons
identity = 0.990
3'(0.958;1.000;1.000)5'
coverage = 0.988
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 16, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226065)
HIX0226065
HIT000705286 (
ENST00000593473
)
(Deoxyhypusine synthase family protein.)
genome : 12,790,758 - 12,792,667 (1,910)
query : 1 - 676 (676/676)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 16, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226065)
HIX0226453
HIT000705365 (
ENST00000593554
)
(Non-protein coding transcript.)
genome : 12,793,507 - 12,798,073 (4,567)
query : 21 - 635 (615/635)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226453)
HIX0195898
HIT000503587
(
BC171856
)
Representative transcript
(G-protein, gamma subunit family protein.)
genome : 12,798,812 - 12,799,236 (425)
query : 1 - 425 (425/425)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR001770 : G-protein, gamma subunit
IPR015898 : G-protein gamma-like domain
GO :
0004871 : Molecular Function : signal transducer activity
0005834 : Cellular Component : heterotrimeric G-protein complex
0007186 : Biological Process : G-protein coupled receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195898)
Ortholog candidate ( ->
Evola
)
Canis
sp. (Dog) : ENSCAFT00000027301
Oryzias
sp. (Medaka) : ENSORLT00000006608
Rattus
sp. (Rat) : XM_001064100
Macaca
sp. (Macaque) : XM_001109396
Monodelphis
sp. (Opossum) : XM_001362487
Equus
sp. (Horse) : XM_001504889
Mus
sp. (Mouse) : XM_488140
Pan
sp. (Chimpanzee) : XM_524124
Bos
sp. (Cow) : XM_607872
HIX0195898
HIT000503412
(
BC157857
)
(G-protein, gamma subunit family protein.)
genome : 12,798,812 - 12,799,234 (423)
query : 1 - 423 (423/423)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR001770 : G-protein, gamma subunit
IPR015898 : G-protein gamma-like domain
GO :
0004871 : Molecular Function : signal transducer activity
0005834 : Cellular Component : heterotrimeric G-protein complex
0007186 : Biological Process : G-protein coupled receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195898)
HIX0014798
HIT000699140 (
ENST00000587296
)
(F-box/WD repeat-containing protein 9; F-box and WD-40 domain-containing protein 9;)
genome : 12,798,867 - 12,807,433 (8,567)
query : 1 - 1,581 (1,581/1,581)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014798)
HIX0014798
HIT000497368
(
AK302744
)
(F-box/WD repeat-containing protein 9; F-box and WD-40 domain-containing protein 9;)
genome : 12,799,121 - 12,807,433 (8,313)
query : 1 - 1,327 (1,327/1,327)
9 exons
identity = 0.999
3'(1.000;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001810 : F-box domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014798)
HIX0014798
HIT000643539 (
ENST00000544494
)
(F-box/WD repeat-containing protein 9; F-box and WD-40 domain-containing protein 9;)
genome : 12,799,121 - 12,807,433 (8,313)
query : 1 - 1,327 (1,327/1,327)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014798)
HIX0014798
HIT000018074
(
AK093207
)
(F-box/WD repeat-containing protein 9; F-box and WD-40 domain-containing protein 9;)
genome : 12,799,615 - 12,801,435 (1,821)
query : 1 - 1,821 (1,821/1,821)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.6667, nucl 11.5, cyto 8.5, extr 8,
cyto_pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014798)
HIX0014798
HIT000031846
(
BC004290
)
(F-box/WD repeat-containing protein 9; F-box and WD-40 domain-containing protein 9;)
genome : 12,799,731 - 12,807,432 (7,702)
query : 1 - 1,713 (1,713/1,769)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001680 : WD40 repeat
IPR001810 : F-box domain
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 17, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014798)
HIX0014798
HIT000210532 (
NM_032301
)
(F-box/WD repeat-containing protein 9; F-box and WD-40 domain-containing protein 9;)
genome : 12,799,730 - 12,807,455 (7,726)
query : 1 - 1,737 (1,737/1,750)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 17, cyto 10
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014798)
HIX0014798
HIT000476719 (
ENST00000393261
)
(F-box/WD repeat-containing protein 9; F-box and WD-40 domain-containing protein 9;)
genome : 12,799,731 - 12,807,457 (7,727)
query : 1 - 1,738 (1,738/1,738)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 17, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014798)
HIX0014798
HIT000361618 (
ENST00000380339
)
(F-box/WD repeat-containing protein 9; F-box and WD-40 domain-containing protein 9;)
genome : 12,799,731 - 12,807,432 (7,702)
query : 1 - 1,803 (1,803/1,803)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 17, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014798)
HIX0226233
HIT000697596 (
ENST00000585742
)
(Non-protein coding transcript.)
genome : 12,799,736 - 12,800,052 (317)
query : 1 - 272 (272/272)
2 exons
identity = 0.971
5'(0.975;0.966)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226233)
HIX0014798
HIT000042910
(
AK123037
)
Representative transcript
(F-box/WD repeat-containing protein 9; F-box and WD-40 domain-containing protein 9;)
genome : 12,799,737 - 12,807,454 (7,718)
query : 1 - 1,729 (1,729/1,729)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR001810 : F-box domain
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 17, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014798)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC043658
Rattus
sp. (Rat) : BC084706
Bos
sp. (Cow) : BC111274
Equus
sp. (Horse) : ENSECAT00000005497
Monodelphis
sp. (Opossum) : ENSMODT00000008638
Pongo
sp. (Orangutan) : ENSPPYT00000011187
Macaca
sp. (Macaque) : XM_001108547
Canis
sp. (Dog) : XM_533906
Pan
sp. (Chimpanzee) : XR_025087
HIX0014798
HIT000257413
(
AY736034
)
(F-box/WD repeat-containing protein 9; F-box and WD-40 domain-containing protein 9;)
genome : 12,800,030 - 12,807,395 (7,366)
query : 1 - 1,437 (1,437/1,437)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR001810 : F-box domain
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 17, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014798)
HIX0014798
HIT000699796 (
ENST00000587955
)
(F-box/WD repeat-containing protein 9; F-box and WD-40 domain-containing protein 9;)
genome : 12,800,030 - 12,807,395 (7,366)
query : 1 - 1,437 (1,437/1,437)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 17, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014798)
HIX0014799
HIT000264865
(
BC072420
)
Representative transcript
(Transportin-2; Karyopherin beta-2b;)
genome : 12,810,016 - 12,833,078 (23,063)
query : 1 - 4,871 (4,871/4,901)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000357 : HEAT
IPR001494 : Importin-beta, N-terminal domain
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
0006886 : Biological Process : intracellular protein transport
0008536 : Molecular Function : Ran GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.8333, nucl 12.5, cyto_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB172521
Mus
sp. (Mouse) : AK154985
Danio
sp. (Zebrafish) : BC080218
Bos
sp. (Cow) : BC112762
Canis
sp. (Dog) : ENSCAFT00000027293
Danio
sp. (Zebrafish) : ENSDART00000062945
Equus
sp. (Horse) : ENSECAT00000014998
Monodelphis
sp. (Opossum) : ENSMODT00000008704
Oryzias
sp. (Medaka) : ENSORLT00000012987
Oryzias
sp. (Medaka) : ENSORLT00000014745
Pongo
sp. (Orangutan) : ENSPPYT00000011188
Takifugu
sp. (Fugu) : SINFRUT00000156613
Takifugu
sp. (Fugu) : SINFRUT00000182416
Rattus
sp. (Rat) : XM_001070750
Pan
sp. (Chimpanzee) : XM_512411
Pan
sp. (Chimpanzee) : XM_523581
HIX0014799
HIT000523462 (
ENST00000425528
)
(Transportin-2; Karyopherin beta-2b;)
genome : 12,810,008 - 12,834,810 (24,803)
query : 1 - 5,122 (5,122/5,122)
26 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.8333, nucl 12.5, cyto_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000539433 (
ENST00000441499
)
(Transportin-2; Karyopherin beta-2b;)
genome : 12,810,008 - 12,834,810 (24,803)
query : 1 - 5,092 (5,092/5,092)
26 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.8333, nucl 12.5, cyto_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000560331 (
NM_001136195
)
(Transportin-2; Karyopherin beta-2b;)
genome : 12,810,008 - 12,834,810 (24,803)
query : 1 - 5,092 (5,092/5,092)
26 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.8333, nucl 12.5, cyto_plas 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000560332 (
NM_001136196
)
(Transportin-2; Karyopherin beta-2b;)
genome : 12,810,008 - 12,833,462 (23,455)
query : 1 - 4,949 (4,949/4,949)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.8333, nucl 12.5, cyto_plas 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000204390 (
NM_013433
)
(Transportin-2; Karyopherin beta-2b;)
genome : 12,810,008 - 12,833,105 (23,098)
query : 1 - 4,905 (4,905/4,905)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.8333, nucl 12.5, cyto_plas 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000012797
(
AK056183
)
(Transportin-2 isoform 2.)
genome : 12,810,009 - 12,834,746 (24,738)
query : 1 - 2,836 (2,836/2,836)
18 exons
identity = 0.998
3'(1.000;0.958;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;1.000;1.000;1.000;1.000;
0.993;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001494 : Importin-beta, N-terminal domain
IPR011989 : Armadillo-like helical
GO :
0006886 : Biological Process : intracellular protein transport
0008536 : Molecular Function : Ran GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.8333, nucl 12.5, cyto_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000310793 (
ENST00000356861
)
(Transportin-2; Karyopherin beta-2b;)
genome : 12,810,015 - 12,833,169 (23,155)
query : 1 - 4,962 (4,962/4,962)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.8333, nucl 12.5, cyto_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000027026
(
AL832114
)
(Hypothetical short protein.)
genome : 12,810,486 - 12,811,439 (954)
query : 1 - 955 (955/974)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 3, cyto_nucl 3, nucl 2.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000329886
(
AB210011
)
(Transportin-2; Karyopherin beta-2b;)
genome : 12,810,487 - 12,832,529 (22,043)
query : 1 - 4,993 (4,993/4,993)
24 exons
identity = 1.000
3'(1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000357 : HEAT
IPR001494 : Importin-beta, N-terminal domain
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
0006886 : Biological Process : intracellular protein transport
0008536 : Molecular Function : Ran GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22.5, cyto_mito 15, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000548698 (
ENST00000450764
)
(Transportin-2; Karyopherin beta-2b;)
genome : 12,810,487 - 12,832,529 (22,043)
query : 1 - 4,993 (4,993/4,993)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22.5, cyto_mito 15, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000494109
(
AK299485
)
(Transportin-2 isoform 2.)
genome : 12,811,764 - 12,833,374 (21,611)
query : 2 - 3,055 (3,054/3,055)
25 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.996;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000357 : HEAT
IPR001494 : Importin-beta, N-terminal domain
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
0006886 : Biological Process : intracellular protein transport
0008536 : Molecular Function : Ran GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.8333, nucl 12.5, cyto_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000426498
(
AK307632
)
(Transportin-2 isoform 2.)
genome : 12,811,795 - 12,816,366 (4,572)
query : 1 - 1,145 (1,145/1,145)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000357 : HEAT
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, mito 8, cyto_nucl 7.5, extr 7, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000700989 (
ENST00000589149
)
(Transportin-2 isoform 2.)
genome : 12,811,868 - 12,812,964 (1,097)
query : 21 - 564 (544/564)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.965
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 9.5, cyto_nucl 9, nucl 5.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000062469
(
AF019039
)
(Transportin-2; Karyopherin beta-2b;)
genome : 12,811,967 - 12,833,369 (21,403)
query : 33 - 2,926 (2,894/2,926)
25 exons
identity = 0.993
3'(1.000;1.000;1.000;0.970;1.000;0.990;0.990;
0.989;0.981;0.972;1.000;1.000;1.000;0.967;
0.994;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.989
InterPro :
IPR000357 : HEAT
IPR001494 : Importin-beta, N-terminal domain
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
0006886 : Biological Process : intracellular protein transport
0008536 : Molecular Function : Ran GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.8333, nucl 12.5, cyto_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000704106 (
ENST00000592287
)
(Transportin-2; Karyopherin beta-2b;)
genome : 12,811,967 - 12,833,376 (21,410)
query : 11 - 2,914 (2,904/2,914)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.8333, nucl 12.5, cyto_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000061910
(
AF007748
)
(Transportin-2 isoform 2.)
genome : 12,812,141 - 12,834,738 (22,598)
query : 6 - 2,975 (2,970/3,027)
25 exons
identity = 0.985
3'(0.961;0.987;1.000;1.000;1.000;0.990;0.921;
0.962;0.991;1.000;0.977;0.987;1.000;1.000;
1.000;1.000;1.000;0.988;1.000;1.000;1.000;
1.000;0.982;0.991;0.923)5'
coverage = 0.981
InterPro :
IPR001494 : Importin-beta, N-terminal domain
IPR011989 : Armadillo-like helical
GO :
0006886 : Biological Process : intracellular protein transport
0008536 : Molecular Function : Ran GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.8333, nucl 12.5, cyto_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000700056 (
ENST00000588216
)
(Transportin-2; Karyopherin beta-2b;)
genome : 12,812,141 - 12,834,825 (22,685)
query : 1 - 3,056 (3,056/3,056)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.8333, nucl 12.5, cyto_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000698999 (
ENST00000587155
)
(Transportin-2 isoform 1.)
genome : 12,812,413 - 12,813,864 (1,452)
query : 1 - 557 (557/557)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 7.5, cyto_nucl 6, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000005491
(
AK022217
)
(Transportin-2 isoform 2.)
genome : 12,813,216 - 12,815,304 (2,089)
query : 1 - 2,088 (2,088/2,088)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, extr_plas 13.5, extr 8, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000089595
(
BC018314
)
(Transportin-2 isoform 2.)
genome : 12,813,655 - 12,833,339 (19,685)
query : 1 - 2,350 (2,350/2,377)
20 exons
identity = 0.999
3'(0.975;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.995
InterPro :
IPR000357 : HEAT
IPR001494 : Importin-beta, N-terminal domain
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
0006886 : Biological Process : intracellular protein transport
0008536 : Molecular Function : Ran GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.8333, nucl 12.5, cyto_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000697740 (
ENST00000585886
)
(Transportin-2 isoform 2.)
genome : 12,813,642 - 12,833,339 (19,698)
query : 1 - 2,362 (2,362/2,362)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.8333, nucl 12.5, cyto_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000463662
(
DQ597131
)
(Non-protein coding transcript.)
genome : 12,813,693 - 12,813,722 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000698913 (
ENST00000587068
)
(Transportin-2 isoform 2.)
genome : 12,814,490 - 12,816,304 (1,815)
query : 1 - 377 (377/377)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 3, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000701410 (
ENST00000589572
)
(Transportin-2 isoform 2.)
genome : 12,814,571 - 12,817,096 (2,526)
query : 1 - 586 (586/586)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, extr 13, cyto_nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000700331 (
ENST00000588491
)
(Transportin-2 isoform 2.)
genome : 12,814,572 - 12,817,488 (2,917)
query : 1 - 737 (737/737)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 15.5, nucl 10.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000450145
(
DQ583614
)
(Non-protein coding transcript.)
genome : 12,816,359 - 12,816,388 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000334124
(
BC063679
)
(Transportin-2 isoform 2.)
genome : 12,816,981 - 12,831,805 (14,825)
query : 12 - 1,724 (1,713/1,899)
13 exons
identity = 0.994
3'(0.946;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.935
InterPro :
IPR001494 : Importin-beta, N-terminal domain
IPR011989 : Armadillo-like helical
GO :
0006886 : Biological Process : intracellular protein transport
0008536 : Molecular Function : Ran GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.6667, nucl 14, cyto 13,
cyto_mito 8.16667, mito_nucl 8.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0080048
HIT000367097 (
NR_002751
)
(Non-protein coding transcript.)
genome : 12,817,263 - 12,817,332 (70)
query : 1 - 70 (70/70)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0080048)
HIX0080048
HIT000383088
(
X96640
)
Representative transcript
(Non-protein coding transcript.)
genome : 12,817,263 - 12,817,332 (70)
query : 1 - 70 (70/70)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0080048)
HIX0080048
HIT000472596 (
ENST00000386967
)
(Non-protein coding transcript.)
genome : 12,817,263 - 12,817,332 (70)
query : 1 - 70 (70/70)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0080048)
HIX0080048
HIT000455079
(
DQ588548
)
(Non-protein coding transcript.)
genome : 12,817,304 - 12,817,332 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0080048)
HIX0014799
HIT000701793 (
ENST00000589956
)
(Transportin-1; Importin beta-2; Karyopherin beta-2; M9 region interaction protein; MIP;)
genome : 12,821,557 - 12,833,354 (11,798)
query : 1 - 594 (594/594)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, nucl 14, cyto 13, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000699992 (
ENST00000588151
)
(Transportin-2 isoform 2.)
genome : 12,822,057 - 12,826,080 (4,024)
query : 1 - 546 (546/546)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, extr 10, cyto_nucl 9, cysk 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000698621 (
ENST00000586775
)
(Transportin-2 isoform 2.)
genome : 12,825,718 - 12,833,101 (7,384)
query : 1 - 945 (945/945)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 13.5, extr 2, pero 2, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000700324 (
ENST00000588484
)
(Transportin-2 isoform 2.)
genome : 12,826,012 - 12,830,101 (4,090)
query : 1 - 545 (545/545)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 11.5, cyto 10.5, extr 4, mito 3,
pero 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000699496 (
ENST00000587654
)
(Transportin-2 isoform 2.)
genome : 12,826,255 - 12,833,351 (7,097)
query : 1 - 575 (575/575)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 13.5, extr 2, pero 2, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000440294
(
DQ573763
)
(Non-protein coding transcript.)
genome : 12,826,287 - 12,826,316 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000701176 (
ENST00000589337
)
(Transportin-2 isoform 2.)
genome : 12,829,912 - 12,834,746 (4,835)
query : 1 - 541 (541/541)
5 exons
identity = 0.993
3'(1.000;1.000;1.000;1.000;0.976)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014799
HIT000702608 (
ENST00000590781
)
(Transportin-2 isoform 2.)
genome : 12,830,081 - 12,834,427 (4,347)
query : 1 - 547 (547/547)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13, extr 7, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014799)
HIX0014801
HIT000032008
(
BC004533
)
(Conserved hypothetical protein.)
genome : 12,841,454 - 12,845,474 (4,021)
query : 1 - 855 (855/924)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014801)
HIX0014801
HIT000037088
(
BC015347
)
(Conserved hypothetical protein.)
genome : 12,841,454 - 12,845,488 (4,035)
query : 1 - 869 (869/913)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014801)
HIX0014801
HIT000333686
(
BC001840
)
Representative transcript
(Conserved hypothetical protein.)
genome : 12,841,454 - 12,845,530 (4,077)
query : 9 - 919 (911/954)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014801)
HIX0014801
HIT000029439
(
BC000216
)
(Conserved hypothetical protein.)
genome : 12,841,454 - 12,845,529 (4,076)
query : 1 - 910 (910/945)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014801)
HIX0014801
HIT000209070 (
NM_024038
)
(Conserved hypothetical protein.)
genome : 12,841,454 - 12,845,529 (4,076)
query : 1 - 910 (910/945)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014801)
HIX0014801
HIT000010860
(
AK027588
)
(Conserved hypothetical protein.)
genome : 12,841,454 - 12,845,418 (3,965)
query : 7 - 805 (799/820)
3 exons
identity = 0.995
3'(1.000;1.000;0.986)5'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014801)
HIX0014801
HIT000105228 (
ENST00000242784
)
(Conserved hypothetical protein.)
genome : 12,841,454 - 12,845,589 (4,136)
query : 1 - 970 (970/970)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014801)
HIX0014801
HIT000704092 (
ENST00000592273
)
(Conserved hypothetical protein.)
genome : 12,841,454 - 12,845,480 (4,027)
query : 1 - 783 (783/783)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014801)
HIX0014801
HIT000703077 (
ENST00000591254
)
(Conserved hypothetical protein.)
genome : 12,841,454 - 12,845,471 (4,018)
query : 1 - 988 (988/988)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014801)
HIX0014801
HIT000700053 (
ENST00000588213
)
(Conserved hypothetical protein.)
genome : 12,841,456 - 12,845,485 (4,030)
query : 1 - 841 (841/841)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014801)
HIX0014801
HIT000064972
(
AF061732
)
(Conserved hypothetical protein.)
genome : 12,841,456 - 12,842,214 (759)
query : 1 - 484 (484/484)
2 exons
identity = 0.996
3'(0.995;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 7.5, mito 6, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014801)
HIX0014801
HIT000701428 (
ENST00000589590
)
(Conserved hypothetical protein.)
genome : 12,841,463 - 12,842,667 (1,205)
query : 1 - 930 (930/930)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 13, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014801)
HIX0014801
HIT000434620
(
AK315754
)
(Conserved hypothetical protein.)
genome : 12,841,775 - 12,845,495 (3,721)
query : 1 - 555 (555/555)
3 exons
identity = 0.998
3'(1.000;1.000;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014801)
HIX0014801
HIT000096390
(
BC040846
)
(Conserved hypothetical protein.)
genome : 12,843,903 - 12,845,542 (1,640)
query : 1 - 1,640 (1,640/1,655)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014801)
HIX0014802
HIT000702914 (
ENST00000591090
)
(ATPase ASNA1; EC=3.6.-.-; Arsenical pump-driving ATPase; Arsenite-stimulated ATPase; Transmembrane domain recognition complex 40 kDa ATPase subunit; hARSA-I; hASNA-I;)
genome : 12,847,953 - 12,859,137 (11,185)
query : 1 - 1,368 (1,368/1,368)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.6.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13, cysk 6, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014802)
HIX0014802
HIT000698407 (
ENST00000586561
)
(ATPase ASNA1.)
genome : 12,848,072 - 12,856,564 (8,493)
query : 1 - 848 (848/848)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.3.16
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, cysk 6, nucl 5.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014802)
HIX0014802
HIT000331143
(
AK223363
)
(ATPase ASNA1; EC=3.6.-.-; Arsenical pump-driving ATPase; Arsenite-stimulated ATPase; Transmembrane domain recognition complex 40 kDa ATPase subunit; hARSA-I; hASNA-I;)
genome : 12,848,311 - 12,859,137 (10,827)
query : 7 - 1,281 (1,275/1,303)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.995;1.000)3'
coverage = 0.995
EC number :
EC 3.6.-.-
InterPro :
IPR016300 : Arsenical pump ATPase, ArsA/GET3
IPR025723 : Anion-transporting ATPase-like domain
GO :
0005524 : Molecular Function : ATP binding
0016887 : Molecular Function : ATPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13, cysk 6, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014802)
HIX0014802
HIT000201072 (
NM_004317
)
(ATPase ASNA1; EC=3.6.-.-; Arsenical pump-driving ATPase; Arsenite-stimulated ATPase; Transmembrane domain recognition complex 40 kDa ATPase subunit; hARSA-I; hASNA-I;)
genome : 12,848,306 - 12,859,137 (10,832)
query : 1 - 1,280 (1,280/1,298)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 3.6.3.16
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13, cysk 6, nucl 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014802)
HIX0014802
HIT000311192 (
ENST00000357332
)
(ATPase ASNA1; EC=3.6.-.-; Arsenical pump-driving ATPase; Arsenite-stimulated ATPase; Transmembrane domain recognition complex 40 kDa ATPase subunit; hARSA-I; hASNA-I;)
genome : 12,848,306 - 12,859,137 (10,832)
query : 1 - 1,280 (1,280/1,280)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13, cysk 6, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014802)
HIX0014802
HIT000424652
(
AK291855
)
(ATPase ASNA1; EC=3.6.-.-; Arsenical pump-driving ATPase; Arsenite-stimulated ATPase; Transmembrane domain recognition complex 40 kDa ATPase subunit; hARSA-I; hASNA-I;)
genome : 12,848,311 - 12,858,988 (10,678)
query : 1 - 1,126 (1,126/1,126)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.-.-
InterPro :
IPR016300 : Arsenical pump ATPase, ArsA/GET3
IPR025723 : Anion-transporting ATPase-like domain
GO :
0005524 : Molecular Function : ATP binding
0016887 : Molecular Function : ATPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13, cysk 6, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014802)
HIX0014802
HIT000702461 (
ENST00000590633
)
(ATPase ASNA1.)
genome : 12,848,311 - 12,856,464 (8,154)
query : 1 - 592 (592/592)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.3.16
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 9, lyso 3, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014802)
HIX0014802
HIT000064125
(
AF047469
)
(ATPase ASNA1; EC=3.6.-.-; Arsenical pump-driving ATPase; Arsenite-stimulated ATPase; Transmembrane domain recognition complex 40 kDa ATPase subunit; hARSA-I; hASNA-I;)
genome : 12,848,318 - 12,859,137 (10,820)
query : 7 - 1,274 (1,268/1,292)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.991;1.000;0.997)3'
coverage = 0.995
EC number :
EC 3.6.-.-
InterPro :
IPR016300 : Arsenical pump ATPase, ArsA/GET3
IPR025723 : Anion-transporting ATPase-like domain
GO :
0005524 : Molecular Function : ATP binding
0016887 : Molecular Function : ATPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 11.5, cysk 8, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014802)
HIX0014802
HIT000031067
(
BC002651
)
Representative transcript
(ATPase ASNA1; EC=3.6.-.-; Arsenical pump-driving ATPase; Arsenite-stimulated ATPase; Transmembrane domain recognition complex 40 kDa ATPase subunit; hARSA-I; hASNA-I;)
genome : 12,848,319 - 12,859,137 (10,819)
query : 1 - 1,267 (1,267/1,285)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 3.6.-.-
InterPro :
IPR016300 : Arsenical pump ATPase, ArsA/GET3
IPR025723 : Anion-transporting ATPase-like domain
GO :
0005524 : Molecular Function : ATP binding
0016887 : Molecular Function : ATPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13, cysk 6, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014802)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF039405
Danio
sp. (Zebrafish) : BC071461
Rattus
sp. (Rat) : BC098819
Bos
sp. (Cow) : BC142125
Monodelphis
sp. (Opossum) : ENSMODT00000008738
Oryzias
sp. (Medaka) : ENSORLT00000018246
Pongo
sp. (Orangutan) : ENSPPYT00000011190
Takifugu
sp. (Fugu) : SINFRUT00000151122
Macaca
sp. (Macaque) : XM_001109531
Equus
sp. (Horse) : XM_001504887
Pan
sp. (Chimpanzee) : XM_512413
Canis
sp. (Dog) : XM_862364
HIX0014802
HIT000220630
(
U60276
)
(ATPase ASNA1.)
genome : 12,848,369 - 12,859,136 (10,768)
query : 1 - 1,216 (1,216/1,216)
7 exons
identity = 0.997
5'(0.991;1.000;0.987;1.000;1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 3.6.3.16
InterPro :
IPR016300 : Arsenical pump ATPase, ArsA/GET3
IPR025723 : Anion-transporting ATPase-like domain
GO :
0005524 : Molecular Function : ATP binding
0016887 : Molecular Function : ATPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 5, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014802)
HIX0021605
HIT000663541 (
ENST00000549706
)
(Bestrophin-2; Vitelliform macular dystrophy 2-like protein 1;)
genome : 12,862,516 - 12,869,220 (6,705)
query : 1 - 2,183 (2,183/2,183)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13.5, cyto_mito 9.5, plas 6, cyto 4.5, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021605)
HIX0021605
HIT000666444 (
ENST00000553030
)
(Bestrophin-2; Vitelliform macular dystrophy 2-like protein 1;)
genome : 12,862,616 - 12,869,272 (6,657)
query : 1 - 2,000 (2,000/2,000)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13.5, cyto_mito 9.5, plas 6, cyto 4.5, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021605)
HIX0021605
HIT000206559 (
NM_017682
)
(Bestrophin-2; Vitelliform macular dystrophy 2-like protein 1;)
genome : 12,863,407 - 12,869,270 (5,864)
query : 1 - 1,909 (1,909/1,924)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13.5, cyto_mito 9.5, plas 6, cyto 4.5, lyso 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021605)
HIX0021605
HIT000079692
(
AF440756
)
Representative transcript
(Bestrophin-2; Vitelliform macular dystrophy 2-like protein 1;)
genome : 12,863,407 - 12,869,269 (5,863)
query : 1 - 1,908 (1,908/1,908)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000615 : Bestrophin
IPR021134 : Bestrophin/UPF0187
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13.5, cyto_mito 9.5, plas 6, cyto 4.5, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021605)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC036157
Oryzias
sp. (Medaka) : ENSORLT00000007715
Pongo
sp. (Orangutan) : ENSPPYT00000011191
Rattus
sp. (Rat) : ENSRNOT00000004973
Tetraodon
sp. (Tetraodon) : GSTENT00022642001
Takifugu
sp. (Fugu) : SINFRUT00000151123
Macaca
sp. (Macaque) : XM_001108800
Monodelphis
sp. (Opossum) : XM_001362802
Pan
sp. (Chimpanzee) : XM_512414
Canis
sp. (Dog) : XM_542045
Bos
sp. (Cow) : XM_607911
Danio
sp. (Zebrafish) : XM_690505
HIX0021605
HIT000102319 (
ENST00000042931
)
(Bestrophin-2; Vitelliform macular dystrophy 2-like protein 1;)
genome : 12,863,407 - 12,869,269 (5,863)
query : 1 - 1,908 (1,908/1,908)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13.5, cyto_mito 9.5, plas 6, cyto 4.5, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021605)
HIX0021605
HIT000255105
(
AY515705
)
(Bestrophin-2; Vitelliform macular dystrophy 2-like protein 1;)
genome : 12,863,407 - 12,868,891 (5,485)
query : 1 - 1,530 (1,530/1,530)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995)3'
coverage = 1.000
InterPro :
IPR000615 : Bestrophin
IPR021134 : Bestrophin/UPF0187
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13.5, cyto_mito 9.5, plas 6, cyto 4.5, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021605)
HIX0021605
HIT000002614
(
AK000139
)
(Bestrophin-2; Vitelliform macular dystrophy 2-like protein 1;)
genome : 12,863,472 - 12,869,270 (5,799)
query : 1 - 1,844 (1,844/1,861)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 8, plas 6, mito 6, lyso 5, cyto 2, pero 2,
golg 2, cyto_pero 2, cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021605)
HIX0021605
HIT000384362
(
AK225232
)
(Bestrophin-2; Vitelliform macular dystrophy 2-like protein 1;)
genome : 12,863,472 - 12,869,250 (5,779)
query : 1 - 1,824 (1,824/1,824)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996)3'
coverage = 1.000
InterPro :
IPR000615 : Bestrophin
IPR021134 : Bestrophin/UPF0187
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 8, plas 6, mito 6, lyso 5, cyto 2, pero 2,
golg 2, cyto_pero 2, cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021605)
HIX0021605
HIT000666015 (
ENST00000552539
)
(Bestrophin-2; Vitelliform macular dystrophy 2-like protein 1;)
genome : 12,866,673 - 12,867,520 (848)
query : 1 - 643 (643/643)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 9, cyto_nucl 7.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021605)
HIX0225900
HIT000701753 (
ENST00000589915
)
(Conserved hypothetical protein.)
genome : 12,874,177 - 12,874,536 (360)
query : 1 - 264 (264/264)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225900)
HIX0225900
HIT000698556 (
ENST00000586710
)
(Hook-related protein family protein.)
genome : 12,874,515 - 12,876,178 (1,664)
query : 1 - 548 (548/548)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225900)
HIX0225900
HIT000049000
(
AK129729
)
Representative transcript
(Conserved hypothetical protein.)
genome : 12,875,162 - 12,877,337 (2,176)
query : 1 - 2,095 (2,095/2,095)
2 exons
identity = 0.999
3'(0.998;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 11.5, cyto_nucl 10, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225900)
HIX0225900
HIT000704078 (
ENST00000592259
)
(Conserved hypothetical protein.)
genome : 12,875,162 - 12,877,337 (2,176)
query : 1 - 2,095 (2,095/2,095)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 11.5, cyto_nucl 10, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225900)
HIX0225900
HIT000703661 (
ENST00000591839
)
(Hook-related protein family protein.)
genome : 12,876,471 - 12,877,428 (958)
query : 1 - 870 (870/870)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 11, nucl 10.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225900)
HIX0225900
HIT000701237 (
ENST00000589398
)
(Hook-related protein family protein.)
genome : 12,876,607 - 12,878,898 (2,292)
query : 1 - 590 (590/590)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 9, extr 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225900)
HIX0226023
HIT000701239 (
ENST00000589400
)
(Hook-related protein family protein.)
genome : 12,880,770 - 12,889,226 (8,457)
query : 1 - 1,097 (1,097/1,097)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 13, cyto 13, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226023)
HIX0226023
HIT000703900 (
ENST00000592079
)
(Hook-related protein family protein.)
genome : 12,881,751 - 12,889,271 (7,521)
query : 1 - 965 (965/965)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 14.5, cyto 12.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226023)
HIX0226023
HIT000702665 (
ENST00000590839
)
(Hook-related protein family protein.)
genome : 12,882,043 - 12,889,234 (7,192)
query : 1 - 801 (801/801)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15, cyto 9, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226023)
HIX0226023
HIT000698134 (
ENST00000586284
)
(Hook-related protein family protein.)
genome : 12,882,043 - 12,886,353 (4,311)
query : 1 - 851 (851/851)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15, cyto 9, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226023)
HIX0226023
HIT000698565 (
ENST00000586719
)
(Hook-related protein family protein.)
genome : 12,882,091 - 12,889,233 (7,143)
query : 1 - 729 (729/729)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 12, nucl 11, cyto 7, extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226023)
HIX0226023
HIT000699893 (
ENST00000588052
)
(Hook-related protein family protein.)
genome : 12,882,209 - 12,884,067 (1,859)
query : 1 - 607 (607/607)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, extr 9, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226023)
HIX0226023
HIT000699805 (
ENST00000587964
)
(Hook-related protein family protein.)
genome : 12,882,631 - 12,883,494 (864)
query : 1 - 193 (193/193)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13.5, extr 8, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226023)
HIX0226023
HIT000699022 (
ENST00000587178
)
(Hook-related protein family protein.)
genome : 12,883,004 - 12,886,384 (3,381)
query : 1 - 748 (748/748)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12, nucl 9.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226023)
HIX0226023
HIT000704626 (
ENST00000592808
)
(Conserved hypothetical protein.)
genome : 12,884,766 - 12,886,386 (1,621)
query : 1 - 1,114 (1,114/1,114)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13, nucl 9, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226023)
HIX0226023
HIT000703074 (
ENST00000591251
)
(Conserved hypothetical protein.)
genome : 12,884,787 - 12,889,206 (4,420)
query : 1 - 973 (973/973)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13, nucl 9, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226023)
HIX0226023
HIT000700974 (
ENST00000589134
)
(Hook-related protein family protein.)
genome : 12,884,892 - 12,886,358 (1,467)
query : 1 - 890 (890/890)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 10.5, cyto_nucl 8.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226023)
HIX0226023
HIT000703463 (
ENST00000591641
)
(Hook-related protein family protein.)
genome : 12,885,150 - 12,889,260 (4,111)
query : 1 - 594 (594/594)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, nucl 14, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226023)
HIX0226023
HIT000704961 (
ENST00000593143
)
(Hook-related protein family protein.)
genome : 12,885,316 - 12,903,396 (18,081)
query : 1 - 585 (585/585)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 14, nucl 10, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226023)
HIX0226023
HIT000704330 (
ENST00000592512
)
(Hook-related protein family protein.)
genome : 12,885,349 - 12,889,223 (3,875)
query : 1 - 403 (403/403)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 11, cyto_nucl 10.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226023)
HIX0226355
HIT000701900 (
ENST00000590065
)
(Conserved hypothetical protein.)
genome : 12,895,353 - 12,895,915 (563)
query : 1 - 388 (388/388)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, mito 5, cyto 3.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226355)
HIX0226012
HIT000696932 (
ENST00000585074
)
(Non-protein coding transcript.)
genome : 12,897,942 - 12,898,006 (65)
query : 1 - 65 (65/65)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226012)
HIX0226012
HIT000727266 (
NR_049864
)
(Non-protein coding transcript.)
genome : 12,897,942 - 12,898,006 (65)
query : 1 - 65 (65/65)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226012)
HIX0014804
HIT000393016
(
DQ650707
)
(Non-protein coding transcript.)
genome : 12,902,289 - 12,902,585 (297)
query : 1 - 296 (296/296)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014804)
HIX0014804
HIT000330312
(
AK222532
)
(Transcription factor Jun family protein.)
genome : 12,902,296 - 12,904,106 (1,811)
query : 6 - 1,817 (1,812/1,817)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.997
InterPro :
IPR002112 : Transcription factor Jun
IPR004827 : Basic-leucine zipper domain
IPR005643 : Jun-like transcription factor
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014804)
HIX0014804
HIT000432603
(
AK313737
)
(Transcription factor Jun family protein.)
genome : 12,902,299 - 12,903,629 (1,331)
query : 1 - 1,331 (1,331/1,331)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR002112 : Transcription factor Jun
IPR004827 : Basic-leucine zipper domain
IPR005643 : Jun-like transcription factor
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014804)
HIX0014804
HIT000339530
(
BC110372
)
(Transcription factor Jun family protein.)
genome : 12,902,308 - 12,904,128 (1,821)
query : 1 - 1,720 (1,720/1,734)
2 exons
identity = 0.998
5'(0.995;0.999)3'
coverage = 1.000
InterPro :
IPR002112 : Transcription factor Jun
IPR004827 : Basic-leucine zipper domain
IPR005643 : Jun-like transcription factor
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014804)
HIX0014804
HIT000031817
(
BC004250
)
Representative transcript
(Transcription factor Jun family protein.)
genome : 12,902,310 - 12,904,125 (1,816)
query : 1 - 1,816 (1,816/1,832)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR002112 : Transcription factor Jun
IPR004827 : Basic-leucine zipper domain
IPR005643 : Jun-like transcription factor
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014804)
HIX0014804
HIT000034382
(
BC009465
)
(Transcription factor Jun family protein.)
genome : 12,902,310 - 12,904,125 (1,816)
query : 1 - 1,816 (1,816/1,832)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR002112 : Transcription factor Jun
IPR004827 : Basic-leucine zipper domain
IPR005643 : Jun-like transcription factor
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014804)
HIX0014804
HIT000034383
(
BC009466
)
(Transcription factor Jun family protein.)
genome : 12,902,310 - 12,904,125 (1,816)
query : 1 - 1,816 (1,816/1,832)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR002112 : Transcription factor Jun
IPR004827 : Basic-leucine zipper domain
IPR005643 : Jun-like transcription factor
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014804)
HIX0014804
HIT000199145 (
NM_002229
)
(Transcription factor Jun family protein.)
genome : 12,902,310 - 12,904,125 (1,816)
query : 1 - 1,816 (1,816/1,832)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014804)
HIX0014804
HIT000116250 (
ENST00000302754
)
(Transcription factor Jun family protein.)
genome : 12,902,310 - 12,904,124 (1,815)
query : 1 - 1,815 (1,815/1,815)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014804)
HIX0014804
HIT000321637
(
X51345
)
(Transcription factor Jun family protein.)
genome : 12,902,333 - 12,904,129 (1,797)
query : 1 - 1,797 (1,797/1,797)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR002112 : Transcription factor Jun
IPR004827 : Basic-leucine zipper domain
IPR005643 : Jun-like transcription factor
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014804)
HIX0014804
HIT000266644
(
BT019760
)
(Transcription factor Jun family protein.)
genome : 12,902,586 - 12,903,627 (1,042)
query : 1 - 1,042 (1,042/1,044)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.998
InterPro :
IPR002112 : Transcription factor Jun
IPR004827 : Basic-leucine zipper domain
IPR005643 : Jun-like transcription factor
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014804)
HIX0014805
HIT000261280
(
BC064138
)
(Peroxiredoxin-2; EC=1.11.1.15; Natural killer cell-enhancing factor B; NKEF-B; PRP; Thiol-specific antioxidant protein; TSA; Thioredoxin peroxidase 1; Thioredoxin-dependent peroxide reductase 1;)
genome : 12,907,637 - 12,912,603 (4,967)
query : 1 - 1,717 (1,717/1,762)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 1.11.1.15
KEGG pathway :
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
InterPro :
IPR000866 : Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant
IPR012336 : Thioredoxin-like fold
GO :
0016209 : Molecular Function : antioxidant activity
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 6, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014805)
HIX0014805
HIT000029637
(
BC000452
)
(Peroxiredoxin-2; EC=1.11.1.15; Natural killer cell-enhancing factor B; NKEF-B; PRP; Thiol-specific antioxidant protein; TSA; Thioredoxin peroxidase 1; Thioredoxin-dependent peroxide reductase 1;)
genome : 12,907,637 - 12,912,603 (4,967)
query : 1 - 914 (914/948)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 1.11.1.15
KEGG pathway :
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
InterPro :
IPR000866 : Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant
IPR012336 : Thioredoxin-like fold
IPR019479 : Peroxiredoxin, C-terminal
GO :
0016209 : Molecular Function : antioxidant activity
0016491 : Molecular Function : oxidoreductase activity
0051920 : Molecular Function : peroxiredoxin activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 16, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014805)
HIX0014805
HIT000031366
(
BC003022
)
(Peroxiredoxin-2; EC=1.11.1.15; Natural killer cell-enhancing factor B; NKEF-B; PRP; Thiol-specific antioxidant protein; TSA; Thioredoxin peroxidase 1; Thioredoxin-dependent peroxide reductase 1;)
genome : 12,907,637 - 12,912,603 (4,967)
query : 1 - 914 (914/948)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 1.11.1.15
KEGG pathway :
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
InterPro :
IPR000866 : Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant
IPR012336 : Thioredoxin-like fold
IPR019479 : Peroxiredoxin, C-terminal
GO :
0016209 : Molecular Function : antioxidant activity
0016491 : Molecular Function : oxidoreductase activity
0051920 : Molecular Function : peroxiredoxin activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 16, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014805)
HIX0014805
HIT000192329
(
L19185
)
(Peroxiredoxin-2; EC=1.11.1.15; Natural killer cell-enhancing factor B; NKEF-B; PRP; Thiol-specific antioxidant protein; TSA; Thioredoxin peroxidase 1; Thioredoxin-dependent peroxide reductase 1;)
genome : 12,907,639 - 12,912,631 (4,993)
query : 36 - 980 (945/1,008)
6 exons
identity = 0.970
3'(0.954;1.000;0.976;0.994;1.000;0.900)5'
coverage = 0.963
EC number :
EC 1.11.1.15
KEGG pathway :
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
InterPro :
IPR000866 : Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant
IPR012336 : Thioredoxin-like fold
IPR019479 : Peroxiredoxin, C-terminal
GO :
0016209 : Molecular Function : antioxidant activity
0016491 : Molecular Function : oxidoreductase activity
0051920 : Molecular Function : peroxiredoxin activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 16, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014805)
HIX0014805
HIT000202468 (
NM_005809
)
(Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant domain containing protein.)
genome : 12,907,634 - 12,912,724 (5,091)
query : 1 - 1,038 (1,038/1,052)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.11.1.15
KEGG pathway :
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 16, mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014805)
HIX0014805
HIT000052200
(
BC039428
)
Representative transcript
(Peroxiredoxin-2; EC=1.11.1.15; Natural killer cell-enhancing factor B; NKEF-B; PRP; Thiol-specific antioxidant protein; TSA; Thioredoxin peroxidase 1; Thioredoxin-dependent peroxide reductase 1;)
genome : 12,907,638 - 12,912,663 (5,026)
query : 1 - 973 (973/988)
6 exons
identity = 0.998
3'(0.994;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 1.11.1.15
KEGG pathway :
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
InterPro :
IPR000866 : Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant
IPR012336 : Thioredoxin-like fold
IPR019479 : Peroxiredoxin, C-terminal
GO :
0016209 : Molecular Function : antioxidant activity
0016491 : Molecular Function : oxidoreductase activity
0051920 : Molecular Function : peroxiredoxin activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 16, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014805)
HIX0014805
HIT000115894 (
ENST00000301522
)
(Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant domain containing protein.)
genome : 12,907,634 - 12,912,673 (5,040)
query : 1 - 987 (987/987)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 16, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014805)
HIX0014805
HIT000128986 (
ENST00000334482
)
(Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant domain containing protein.)
genome : 12,907,634 - 12,912,601 (4,968)
query : 1 - 784 (784/784)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 14, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014805)
HIX0226224
HIT000697352 (
ENST00000585496
)
(Hypothetical short protein.)
genome : 12,907,637 - 12,912,663 (5,027)
query : 1 - 296 (296/296)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226224)
HIX0014805
HIT000488581
(
AK293957
)
(Peroxiredoxin-2; EC=1.11.1.15; Natural killer cell-enhancing factor B; NKEF-B; PRP; Thiol-specific antioxidant protein; TSA; Thioredoxin peroxidase 1; Thioredoxin-dependent peroxide reductase 1;)
genome : 12,907,637 - 12,912,644 (5,008)
query : 1 - 894 (894/894)
6 exons
identity = 0.994
3'(0.997;0.957;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.11.1.15
KEGG pathway :
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
InterPro :
IPR000866 : Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant
IPR012336 : Thioredoxin-like fold
GO :
0016209 : Molecular Function : antioxidant activity
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 17, nucl 5.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014805)
HIX0014805
HIT000570838 (
ENST00000466174
)
(Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant domain containing protein.)
genome : 12,907,637 - 12,912,603 (4,967)
query : 1 - 1,717 (1,717/1,717)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014805)
HIX0014805
HIT000323916
(
X82321
)
(Peroxiredoxin-2; EC=1.11.1.15; Natural killer cell-enhancing factor B; NKEF-B; PRP; Thiol-specific antioxidant protein; TSA; Thioredoxin peroxidase 1; Thioredoxin-dependent peroxide reductase 1;)
genome : 12,907,641 - 12,911,885 (4,245)
query : 1 - 750 (750/750)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.11.1.15
KEGG pathway :
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
InterPro :
IPR000866 : Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant
IPR012336 : Thioredoxin-like fold
IPR019479 : Peroxiredoxin, C-terminal
GO :
0016209 : Molecular Function : antioxidant activity
0016491 : Molecular Function : oxidoreductase activity
0051920 : Molecular Function : peroxiredoxin activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 12, cyto_nucl 11, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014805)
HIX0014805
HIT000326633
(
Z22548
)
(Peroxiredoxin-2; EC=1.11.1.15; Natural killer cell-enhancing factor B; NKEF-B; PRP; Thiol-specific antioxidant protein; TSA; Thioredoxin peroxidase 1; Thioredoxin-dependent peroxide reductase 1;)
genome : 12,907,644 - 12,912,633 (4,990)
query : 1 - 935 (935/937)
6 exons
identity = 0.980
3'(0.973;1.000;0.967;0.981;1.000;0.963)5'
coverage = 0.998
EC number :
EC 1.11.1.15
KEGG pathway :
00480 : Glutathione metabolism (37)
01100 : Metabolic pathways (1346)
InterPro :
IPR000866 : Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant
IPR012336 : Thioredoxin-like fold
IPR019479 : Peroxiredoxin, C-terminal
GO :
0016209 : Molecular Function : antioxidant activity
0016491 : Molecular Function : oxidoreductase activity
0051920 : Molecular Function : peroxiredoxin activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 16.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014805)
HIX0014805
HIT000268660
(
CR541789
)
(Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant domain containing protein.)
genome : 12,907,895 - 12,912,075 (4,181)
query : 1 - 597 (597/597)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000866 : Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant
IPR012336 : Thioredoxin-like fold
IPR019479 : Peroxiredoxin, C-terminal
GO :
0016209 : Molecular Function : antioxidant activity
0016491 : Molecular Function : oxidoreductase activity
0051920 : Molecular Function : peroxiredoxin activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 16, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014805)
HIX0014805
HIT000267265
(
CR450356
)
(Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant domain containing protein.)
genome : 12,907,898 - 12,912,075 (4,178)
query : 1 - 594 (594/594)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000866 : Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant
IPR012336 : Thioredoxin-like fold
IPR019479 : Peroxiredoxin, C-terminal
GO :
0016209 : Molecular Function : antioxidant activity
0016491 : Molecular Function : oxidoreductase activity
0051920 : Molecular Function : peroxiredoxin activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 16, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014805)
HIX0014805
HIT000005669
(
AK022395
)
(Thioredoxin-like fold domain containing protein.)
genome : 12,909,488 - 12,912,665 (3,178)
query : 1 - 3,180 (3,180/3,180)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
InterPro :
IPR012336 : Thioredoxin-like fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 7, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014805)
HIX0014805
HIT000601993 (
ENST00000498785
)
(Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant domain containing protein.)
genome : 12,910,370 - 12,911,061 (692)
query : 1 - 505 (505/505)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 12, cyto 12, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014805)
HIX0014805
HIT000582995 (
ENST00000478908
)
(Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant domain containing protein.)
genome : 12,910,676 - 12,911,275 (600)
query : 1 - 413 (413/413)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 10, cyto_nucl 8.5, mito_pero 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014805)
HIX0014805
HIT000581698 (
ENST00000477555
)
(Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant domain containing protein.)
genome : 12,910,730 - 12,912,602 (1,873)
query : 1 - 699 (699/699)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15, extr 8, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014805)
HIX0014805
HIT000533637 (
ENST00000435703
)
(Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant domain containing protein.)
genome : 12,911,427 - 12,912,694 (1,268)
query : 1 - 710 (710/710)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014805)
HIX0014805
HIT000422282
(
AK289485
)
(Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant domain containing protein.)
genome : 12,911,486 - 12,912,644 (1,159)
query : 1 - 601 (601/601)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000866 : Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant
IPR012336 : Thioredoxin-like fold
GO :
0016209 : Molecular Function : antioxidant activity
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 6, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014805)
HIX0195934
pHIT000032295 ( pHIT000032295 )
Representative transcript
(Conserved hypothetical protein.)
genome : 12,912,886 - 12,915,117 (2,232)
query : 1 - 309 (309/309)
2 exons
InterPro :
IPR000884 : Thrombospondin, type 1 repeat
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195934)
CAGE tag :
H22BB59C1505
HIX0014806
HIT000103553 (
ENST00000221486
)
(Ribonuclease H2, subunit A family protein.)
genome : 12,917,394 - 12,924,451 (7,058)
query : 1 - 1,165 (1,165/1,165)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 17.5, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014806)
HIX0014806
HIT000434193
(
AK315327
)
(Ribonuclease H2, subunit A family protein.)
genome : 12,917,398 - 12,924,280 (6,883)
query : 1 - 990 (990/990)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001352 : Ribonuclease HII/HIII
IPR004649 : Ribonuclease H2, subunit A
IPR012337 : Ribonuclease H-like domain
IPR023160 : Ribonuclease HII, helix-loop-helix cap domain
IPR024567 : Ribonuclease HII/HIII domain
GO :
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0004523 : Molecular Function : RNA-DNA hybrid ribonuclease activity
0016070 : Biological Process : RNA metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 17.5, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014806)
HIX0014806
HIT000704835 (
ENST00000593017
)
(Ribonuclease H2, subunit A family protein.)
genome : 12,917,406 - 12,924,452 (7,047)
query : 1 - 1,487 (1,487/1,487)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 17.5, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014806)
HIX0014806
HIT000202998 (
NM_006397
)
(Ribonuclease H2, subunit A family protein.)
genome : 12,917,428 - 12,924,462 (7,035)
query : 1 - 1,142 (1,142/1,148)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.995
EC number :
EC 3.1.26.4
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 17.5, nucl 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014806)
HIX0014806
HIT000328318
(
Z97029
)
(Ribonuclease H2, subunit A family protein.)
genome : 12,917,439 - 12,924,340 (6,902)
query : 12 - 1,020 (1,009/1,020)
8 exons
identity = 0.998
5'(0.994;1.000;1.000;1.000;0.993;1.000;1.000;
1.000)3'
coverage = 0.989
InterPro :
IPR001352 : Ribonuclease HII/HIII
IPR004649 : Ribonuclease H2, subunit A
IPR012337 : Ribonuclease H-like domain
IPR023160 : Ribonuclease HII, helix-loop-helix cap domain
IPR024567 : Ribonuclease HII/HIII domain
GO :
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0004523 : Molecular Function : RNA-DNA hybrid ribonuclease activity
0016070 : Biological Process : RNA metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 17.5, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014806)
HIX0014806
HIT000035421
(
BC011748
)
Representative transcript
(Ribonuclease H2, subunit A family protein.)
genome : 12,917,437 - 12,924,347 (6,911)
query : 1 - 1,018 (1,018/1,054)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.990)3'
coverage = 1.000
InterPro :
IPR001352 : Ribonuclease HII/HIII
IPR004649 : Ribonuclease H2, subunit A
IPR012337 : Ribonuclease H-like domain
IPR023160 : Ribonuclease HII, helix-loop-helix cap domain
IPR024567 : Ribonuclease HII/HIII domain
GO :
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0004523 : Molecular Function : RNA-DNA hybrid ribonuclease activity
0016070 : Biological Process : RNA metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 17.5, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014806)
HIX0014806
HIT000253209
(
AY363912
)
(Ribonuclease H2, subunit A family protein.)
genome : 12,917,439 - 12,924,451 (7,013)
query : 1 - 1,120 (1,120/1,131)
8 exons
identity = 0.997
5'(0.994;1.000;0.992;1.000;1.000;0.989;1.000;
1.000)3'
coverage = 0.999
InterPro :
IPR001352 : Ribonuclease HII/HIII
IPR004649 : Ribonuclease H2, subunit A
IPR012337 : Ribonuclease H-like domain
IPR023160 : Ribonuclease HII, helix-loop-helix cap domain
IPR024567 : Ribonuclease HII/HIII domain
GO :
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0004523 : Molecular Function : RNA-DNA hybrid ribonuclease activity
0016070 : Biological Process : RNA metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 17.5, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014806)
HIX0014806
HIT000267691
(
CR456841
)
(Ribonuclease H2, subunit A family protein.)
genome : 12,917,488 - 12,924,279 (6,792)
query : 1 - 899 (899/900)
8 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;0.989;0.992;
0.993)3'
coverage = 0.999
InterPro :
IPR001352 : Ribonuclease HII/HIII
IPR004649 : Ribonuclease H2, subunit A
IPR012337 : Ribonuclease H-like domain
IPR023160 : Ribonuclease HII, helix-loop-helix cap domain
IPR024567 : Ribonuclease HII/HIII domain
GO :
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0004523 : Molecular Function : RNA-DNA hybrid ribonuclease activity
0016070 : Biological Process : RNA metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 17.5, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014806)
HIX0014806
HIT000701956 (
ENST00000590121
)
(Ribonuclease HII/HIII domain containing protein.)
genome : 12,917,491 - 12,918,771 (1,281)
query : 1 - 859 (859/859)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 7, cyto_nucl 7, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014806)
HIX0014806
HIT000702113 (
ENST00000590279
)
(Ribonuclease HII/HIII domain containing protein.)
genome : 12,917,498 - 12,918,319 (822)
query : 1 - 696 (696/696)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014806)
HIX0014807
HIT000032193
(
BC005063
)
Representative transcript
(Retbindin; Precursor;)
genome : 12,936,296 - 12,946,230 (9,935)
query : 1 - 1,328 (1,328/1,355)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004269 : Folate receptor
IPR018143 : Folate receptor-like
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 18, cyto_nucl 17, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014807)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AY527276
Canis
sp. (Dog) : DQ058011
Equus
sp. (Horse) : ENSECAT00000001265
Pongo
sp. (Orangutan) : ENSPPYT00000011195
Pan
sp. (Chimpanzee) : ENSPTRT00000019446
Rattus
sp. (Rat) : XM_001071055
Macaca
sp. (Macaque) : XM_001109507
Bos
sp. (Cow) : XM_001252790
HIX0014807
HIT000210168 (
NM_031429
)
(Retbindin; Precursor;)
genome : 12,936,291 - 12,946,242 (9,952)
query : 1 - 1,345 (1,345/1,362)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 18, cyto_nucl 17, cyto 10
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014807)
HIX0014807
HIT000724698 (
NM_001270440
)
(Retbindin isoform 3.)
genome : 12,936,291 - 12,946,242 (9,952)
query : 1 - 2,078 (2,078/2,095)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 8.5, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014807)
HIX0014807
HIT000724699 (
NM_001270441
)
(Retbindin; Precursor;)
genome : 12,936,291 - 12,945,390 (9,100)
query : 1 - 1,025 (1,025/1,042)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, cyto 4.5, cyto_nucl 4.33333,
cyto_pero 3.66667, nucl 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014807)
HIX0014807
HIT000724700 (
NM_001270442
)
(Retbindin; Precursor;)
genome : 12,936,291 - 12,945,390 (9,100)
query : 1 - 1,013 (1,013/1,030)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, nucl 4, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014807)
HIX0014807
HIT000724701 (
NM_001270443
)
(Retbindin; Precursor;)
genome : 12,936,291 - 12,941,489 (5,199)
query : 1 - 1,001 (1,001/1,018)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, cyto 2, pero 2, cyto_pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014807)
HIX0014807
HIT000724702 (
NM_001270444
)
(Retbindin; Precursor;)
genome : 12,936,291 - 12,941,489 (5,199)
query : 1 - 989 (989/1,006)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, cyto 2, pero 2, cyto_pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014807)
HIX0014807
HIT000724703 (
NM_001270445
)
(Retbindin; Precursor;)
genome : 12,936,291 - 12,941,489 (5,199)
query : 1 - 983 (983/1,000)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014807)
HIX0014807
HIT000398178 (
NM_001080997
)
(Retbindin; Precursor;)
genome : 12,936,291 - 12,941,230 (4,940)
query : 1 - 1,072 (1,072/1,089)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, cyto 2, pero 2, cyto_pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014807)
HIX0014807
HIT000563923
(
AB593122
)
(Retbindin; Precursor;)
genome : 12,936,292 - 12,945,390 (9,099)
query : 1 - 1,024 (1,024/1,024)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004269 : Folate receptor
IPR018143 : Folate receptor-like
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, cyto 4.5, cyto_nucl 4.33333,
cyto_pero 3.66667, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014807)
HIX0014807
HIT000704024 (
ENST00000592204
)
(Retbindin; Precursor;)
genome : 12,936,292 - 12,945,390 (9,099)
query : 1 - 1,024 (1,024/1,024)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, cyto 4.5, cyto_nucl 4.33333,
cyto_pero 3.66667, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014807)
HIX0014807
HIT000018539
(
AK093672
)
(Retbindin isoform 3.)
genome : 12,936,293 - 12,946,242 (9,950)
query : 1 - 2,076 (2,076/2,076)
7 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;0.984;1.000)5'
coverage = 1.000
InterPro :
IPR004269 : Folate receptor
IPR018143 : Folate receptor-like
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 8.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014807)
HIX0014807
HIT000476693 (
ENST00000393233
)
(Retbindin isoform 3.)
genome : 12,936,293 - 12,946,242 (9,950)
query : 1 - 2,076 (2,076/2,076)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 8.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014807)
HIX0014807
HIT000701111 (
ENST00000589272
)
(Retbindin isoform 3.)
genome : 12,936,293 - 12,946,242 (9,950)
query : 1 - 2,076 (2,076/2,076)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 8.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014807)
HIX0014807
HIT000123315 (
ENST00000322912
)
(Retbindin; Precursor;)
genome : 12,936,296 - 12,946,230 (9,935)
query : 1 - 1,328 (1,328/1,328)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 18, cyto_nucl 17, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014807)
HIX0014807
HIT000556605 (
ENST00000458671
)
(Retbindin; Precursor;)
genome : 12,936,297 - 12,941,230 (4,934)
query : 1 - 1,066 (1,066/1,066)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, cyto 2, pero 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014807)
HIX0014807
HIT000083308
(
AY028917
)
(Retbindin; Precursor;)
genome : 12,936,297 - 12,941,207 (4,911)
query : 1 - 1,043 (1,043/1,043)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004269 : Folate receptor
IPR018143 : Folate receptor-like
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, cyto 2, pero 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014807)
HIX0226307
HIT000700309 (
ENST00000588469
)
(Conserved hypothetical protein.)
genome : 12,936,525 - 12,943,797 (7,273)
query : 1 - 739 (739/739)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226307)
HIX0014807
HIT000698814 (
ENST00000586969
)
(Retbindin; Precursor;)
genome : 12,936,568 - 12,941,469 (4,902)
query : 1 - 692 (692/692)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014807)
HIX0014807
HIT000701519 (
ENST00000589681
)
(Retbindin; Precursor;)
genome : 12,936,612 - 12,941,476 (4,865)
query : 1 - 637 (637/637)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014807)
HIX0014807
HIT000701646 (
ENST00000589808
)
(Retbindin; Precursor;)
genome : 12,936,651 - 12,941,489 (4,839)
query : 1 - 641 (641/641)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014807)
HIX0014807
HIT000702235 (
ENST00000590404
)
(Retbindin; Precursor;)
genome : 12,936,656 - 12,945,362 (8,707)
query : 1 - 620 (620/620)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, nucl 4, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014807)
HIX0014807
HIT000697242 (
ENST00000585384
)
(Retbindin isoform 5 precursor.)
genome : 12,937,604 - 12,941,477 (3,874)
query : 1 - 592 (592/592)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014807)
HIX0014807
HIT000701405 (
ENST00000589567
)
(Retbindin; Precursor;)
genome : 12,937,660 - 12,941,163 (3,504)
query : 1 - 465 (465/465)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014807)
HIX0014807
HIT000703334 (
ENST00000591512
)
(Retbindin; Precursor;)
genome : 12,939,707 - 12,946,229 (6,523)
query : 1 - 861 (861/861)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 4, pero 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014807)
HIX0014807
HIT000699392 (
ENST00000587549
)
(Retbindin; Precursor;)
genome : 12,939,767 - 12,946,229 (6,463)
query : 1 - 658 (658/658)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 16, cyto 15, nucl 11, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014807)
HIX0014808
HIT000703317 (
ENST00000591495
)
(Microtubule-associated serine/threonine-protein kinase 1.)
genome : 12,944,765 - 12,969,678 (24,914)
query : 1 - 1,496 (1,496/1,496)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 17.5, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014808)
HIX0014808
HIT000317163 (
NM_014975
)
(Microtubule-associated serine/threonine-protein kinase 1; EC=2.7.11.1; Syntrophin-associated serine/threonine-protein kinase;)
genome : 12,949,259 - 12,985,766 (36,508)
query : 1 - 4,923 (4,923/4,933)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, mito 7, plas 5, cyto 4, E.R._mito 4,
mito_pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014808)
HIX0014808
HIT000702709 (
ENST00000590883
)
(Microtubule-associated serine/threonine-protein kinase 1.)
genome : 12,949,287 - 12,959,793 (10,507)
query : 1 - 1,717 (1,717/1,717)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 17, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014808)
HIX0014808
HIT000000690
(
AB023190
)
Representative transcript
(Microtubule-associated serine/threonine-protein kinase 1; EC=2.7.11.1; Syntrophin-associated serine/threonine-protein kinase;)
genome : 12,949,348 - 12,985,765 (36,418)
query : 1 - 4,833 (4,833/4,833)
26 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.995;
1.000;1.000;0.985;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, mito 7, plas 5, cyto 4, E.R._mito 4,
mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014808)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AY227207
Mus
sp. (Mouse) : BC054524
Gallus
sp. (Chicken) : CR354134
Canis
sp. (Dog) : ENSCAFT00000027158
Equus
sp. (Horse) : ENSECAT00000024228
Monodelphis
sp. (Opossum) : ENSMODT00000003410
Oryzias
sp. (Medaka) : ENSORLT00000019440
Pongo
sp. (Orangutan) : ENSPPYT00000011196
Tetraodon
sp. (Tetraodon) : GSTENT00007883001
Takifugu
sp. (Fugu) : SINFRUT00000157780
Macaca
sp. (Macaque) : XM_001109914
Danio
sp. (Zebrafish) : XM_001336411
Danio
sp. (Zebrafish) : XM_001337092
Pan
sp. (Chimpanzee) : XR_024414
Bos
sp. (Cow) : XR_028116
HIX0014808
HIT000106153 (
ENST00000251472
)
(Microtubule-associated serine/threonine-protein kinase 1; EC=2.7.11.1; Syntrophin-associated serine/threonine-protein kinase;)
genome : 12,949,348 - 12,985,765 (36,418)
query : 1 - 4,833 (4,833/4,833)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, mito 7, plas 5, cyto 4, E.R._mito 4,
mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014808)
HIX0014808
HIT000492177
(
AK297553
)
(Microtubule-associated serine/threonine-protein kinase 1.)
genome : 12,949,355 - 12,985,761 (36,407)
query : 1 - 2,225 (2,225/2,225)
19 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.995;
1.000;1.000;0.985;0.988;0.995;1.000;1.000;
0.994;1.000;0.992;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000961 : AGC-kinase, C-terminal
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR015022 : Microtubule-associated serine/threonine-protein kinase, domain
IPR023142 : Microtubule-associated serine/threonine-protein kinase, pre-PK domain
IPR028777 : Microtubule-associated serine/threonine-protein kinase 1
GO :
0000287 : Molecular Function : magnesium ion binding
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0007010 : Biological Process : cytoskeleton organization
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, plas 6, nucl 6, cyto 3, cysk_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014808)
HIX0014808
HIT000089316
(
BC017485
)
(Microtubule-associated serine/threonine-protein kinase 1.)
genome : 12,951,317 - 12,969,735 (18,419)
query : 1 - 1,407 (1,407/1,425)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.990;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR015022 : Microtubule-associated serine/threonine-protein kinase, domain
IPR023142 : Microtubule-associated serine/threonine-protein kinase, pre-PK domain
IPR028777 : Microtubule-associated serine/threonine-protein kinase 1
GO :
0000287 : Molecular Function : magnesium ion binding
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0007010 : Biological Process : cytoskeleton organization
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14.5, cyto 7.5, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014808)
HIX0014808
HIT000700219 (
ENST00000588379
)
(Microtubule-associated serine/threonine-protein kinase 1.)
genome : 12,951,317 - 12,969,735 (18,419)
query : 1 - 1,408 (1,408/1,408)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14.5, cyto 7.5, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014808)
HIX0014808
HIT000704531 (
ENST00000592713
)
(Microtubule-associated serine/threonine-protein kinase 1.)
genome : 12,958,049 - 12,958,615 (567)
query : 1 - 406 (406/406)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014808)
HIX0014808
HIT000702039 (
ENST00000590204
)
(Microtubule-associated serine/threonine-protein kinase 1.)
genome : 12,958,633 - 12,962,985 (4,353)
query : 1 - 398 (398/398)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15, extr 8, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014808)
HIX0014808
HIT000700880 (
ENST00000589040
)
(Microtubule-associated serine/threonine-protein kinase 1.)
genome : 12,963,000 - 12,976,282 (13,283)
query : 1 - 983 (983/983)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 10, mito 9, nucl 3.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014808)
HIX0014808
HIT000040393
(
BC027985
)
(Microtubule-associated serine/threonine-protein kinase 1.)
genome : 12,969,345 - 12,985,761 (16,417)
query : 4 - 3,636 (3,633/3,651)
15 exons
identity = 0.999
5'(0.986;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000961 : AGC-kinase, C-terminal
IPR001478 : PDZ domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR028777 : Microtubule-associated serine/threonine-protein kinase 1
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0007010 : Biological Process : cytoskeleton organization
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 11, cyto 5.5, plas 5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014808)
HIX0014808
HIT000702382 (
ENST00000590553
)
(Microtubule-associated serine/threonine-protein kinase 1.)
genome : 12,979,415 - 12,984,454 (5,040)
query : 1 - 959 (959/959)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12, extr 7, cyto 6, E.R._mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014808)
HIX0014808
HIT000697645 (
ENST00000585791
)
(Microtubule-associated serine/threonine-protein kinase 1.)
genome : 12,984,068 - 12,985,163 (1,096)
query : 1 - 999 (999/999)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 9, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014808)
HIX0014808
HIT000091281
(
BC026709
)
(Microtubule-associated serine/threonine-protein kinase 1.)
genome : 12,984,558 - 12,985,766 (1,209)
query : 25 - 1,233 (1,209/1,248)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.981
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 9.5, cyto_nucl 8, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014808)
HIX0014809
HIT000064891
(
AF060222
)
Representative transcript
(Deoxyribonuclease-2-alpha; EC=3.1.22.1; Acid DNase; Deoxyribonuclease II alpha; DNase II alpha; Lysosomal DNase II; R31240_2; Precursor;)
genome : 12,986,025 - 12,992,282 (6,258)
query : 1 - 1,955 (1,955/1,975)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 3.1.22.1
InterPro :
IPR004947 : Deoxyribonuclease II
GO :
0004531 : Molecular Function : deoxyribonuclease II activity
0006259 : Biological Process : DNA metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24.5, extr_plas 13, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014809)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF178975
Mus
sp. (Mouse) : BC060661
Bos
sp. (Cow) : BC118429
Danio
sp. (Zebrafish) : BC159268
Tetraodon
sp. (Tetraodon) : CR691776
Tetraodon
sp. (Tetraodon) : CR721409
Pongo
sp. (Orangutan) : CR857461
Macaca
sp. (Maca