bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0202766
HIT000479767_04 (
ENST00000396421
)
(Zinc finger protein 813.)
genome : 53,971,000 - 54,006,950 (35,951)
query : 1 - 300 (300/300)
4 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202766)
HIX0202766
HIT000609154 (
ENST00000509280
)
(Vomeronasal type-1 receptor 4.)
genome : 54,006,646 - 54,007,532 (887)
query : 1 - 887 (887/887)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 7, cyto 7, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202766)
HIX0202766
HIT000708786 (
ENST00000597004
)
(Vomeronasal type-1 receptor 2.)
genome : 54,007,073 - 54,015,941 (8,869)
query : 1 - 551 (551/551)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202766)
HIX0202766
HIT000045419
(
AK125546
)
(Vomeronasal type-1 receptor 4; V1r-like receptor 4;)
genome : 54,007,104 - 54,009,588 (2,485)
query : 2 - 2,486 (2,485/2,486)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
InterPro :
IPR004072 : Vomeronasal receptor, type 1
GO :
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
0016503 : Molecular Function : pheromone receptor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, mito 6, plas 3, pero 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202766)
HIX0202766
HIT000713701 (
ENST00000601966
)
(Vomeronasal type-1 receptor 4; V1r-like receptor 4;)
genome : 54,007,222 - 54,015,665 (8,444)
query : 1 - 578 (578/578)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, extr 4, pero 4, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202766)
HIX0015423
HIT000207311 (
NM_018555
)
(Zinc finger protein 331; C2H2-like zinc finger protein rearranged in thyroid adenomas; Zinc finger protein 361; Zinc finger protein 463;)
genome : 54,024,177 - 54,083,523 (59,347)
query : 1 - 5,143 (5,143/5,163)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000613464 (
ENST00000513929
)
(Conserved hypothetical protein.)
genome : 54,024,235 - 54,026,769 (2,535)
query : 1 - 1,424 (1,424/1,424)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000306568
(
CR749560
)
(Zinc finger protein 331; C2H2-like zinc finger protein rearranged in thyroid adenomas; Zinc finger protein 361; Zinc finger protein 463;)
genome : 54,024,278 - 54,083,523 (59,246)
query : 2 - 5,053 (5,052/5,165)
7 exons
identity = 0.996
5'(0.985;0.985;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000106448 (
ENST00000253144
)
(Zinc finger protein 331; C2H2-like zinc finger protein rearranged in thyroid adenomas; Zinc finger protein 361; Zinc finger protein 463;)
genome : 54,024,278 - 54,083,523 (59,246)
query : 1 - 5,042 (5,042/5,042)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000048609
(
AK128736
)
(Zinc finger protein 331; C2H2-like zinc finger protein rearranged in thyroid adenomas; Zinc finger protein 361; Zinc finger protein 463;)
genome : 54,024,290 - 54,081,332 (57,043)
query : 1 - 2,838 (2,838/2,838)
7 exons
identity = 0.999
5'(0.998;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000034363
(
BC009433
)
Representative transcript
(Zinc finger protein 331; C2H2-like zinc finger protein rearranged in thyroid adenomas; Zinc finger protein 361; Zinc finger protein 463;)
genome : 54,024,371 - 54,081,333 (56,963)
query : 1 - 2,178 (2,178/2,196)
8 exons
identity = 0.994
5'(0.985;0.969;0.985;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
Ortholog candidate ( ->
Evola
)
Canis
sp. (Dog) : AY375188
Bos
sp. (Cow) : BC149042
Pongo
sp. (Orangutan) : CR857633
Equus
sp. (Horse) : ENSECAT00000007504
Macaca
sp. (Macaque) : XM_001115927
Pan
sp. (Chimpanzee) : XM_512880
HIX0015423
HIT000243013
(
AF412404
)
(Zinc finger protein 331.)
genome : 54,025,086 - 54,080,029 (54,944)
query : 1 - 740 (740/740)
7 exons
identity = 0.997
5'(0.996;1.000;1.000;1.000;1.000;0.992;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 6, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000243012
(
AF412403
)
(Zinc finger protein 331.)
genome : 54,025,093 - 54,080,004 (54,912)
query : 1 - 670 (670/670)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.992;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 8, cyto_mito 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000602615 (
ENST00000502248
)
(Zinc finger protein 331.)
genome : 54,025,093 - 54,080,004 (54,912)
query : 1 - 670 (670/670)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 8, cyto_mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000611301 (
ENST00000511593
)
(Zinc finger protein 331; C2H2-like zinc finger protein rearranged in thyroid adenomas; Zinc finger protein 361; Zinc finger protein 463;)
genome : 54,025,110 - 54,081,335 (56,226)
query : 1 - 1,985 (1,985/1,985)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000547350 (
ENST00000449416
)
(Zinc finger protein 331; C2H2-like zinc finger protein rearranged in thyroid adenomas; Zinc finger protein 361; Zinc finger protein 463;)
genome : 54,039,577 - 54,083,523 (43,947)
query : 1 - 3,817 (3,817/3,817)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000604284 (
ENST00000504033
)
(Hypothetical short protein.)
genome : 54,040,507 - 54,042,544 (2,038)
query : 1 - 578 (578/578)
2 exons
identity = 0.995
5'(1.000;0.960)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 10, cyto_nucl 9.16667,
cyto_pero 6.66667, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000613878 (
ENST00000514374
)
(Zinc finger protein 331.)
genome : 54,040,939 - 54,080,113 (39,175)
query : 1 - 574 (574/574)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 8, cyto_mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000397950 (
NM_001079906
)
(Zinc finger protein 331; C2H2-like zinc finger protein rearranged in thyroid adenomas; Zinc finger protein 361; Zinc finger protein 463;)
genome : 54,041,333 - 54,083,523 (42,191)
query : 1 - 4,131 (4,131/4,151)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000509911 (
ENST00000411977
)
(Zinc finger protein 331; C2H2-like zinc finger protein rearranged in thyroid adenomas; Zinc finger protein 361; Zinc finger protein 463;)
genome : 54,041,333 - 54,081,640 (40,308)
query : 1 - 2,248 (2,248/2,248)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000431755
(
AK312889
)
(Zinc finger protein 331.)
genome : 54,041,397 - 54,081,206 (39,810)
query : 1 - 1,687 (1,687/1,687)
5 exons
identity = 0.998
5'(0.994;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000608956 (
ENST00000509069
)
(Non-protein coding transcript.)
genome : 54,041,399 - 54,042,778 (1,380)
query : 1 - 461 (461/461)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000082261
(
AK075226
)
(Zinc finger protein 331; C2H2-like zinc finger protein rearranged in thyroid adenomas; Zinc finger protein 361; Zinc finger protein 463;)
genome : 54,041,412 - 54,081,640 (40,229)
query : 1 - 2,169 (2,169/2,169)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000243011
(
AF412402
)
(Zinc finger protein 331.)
genome : 54,041,414 - 54,080,071 (38,658)
query : 1 - 598 (598/598)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 8, nucl 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000723379 (
NM_001253798
)
(Zinc finger protein 331; C2H2-like zinc finger protein rearranged in thyroid adenomas; Zinc finger protein 361; Zinc finger protein 463;)
genome : 54,041,540 - 54,083,523 (41,984)
query : 1 - 4,149 (4,149/4,167)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000723380 (
NM_001253799
)
(Zinc finger protein 331; C2H2-like zinc finger protein rearranged in thyroid adenomas; Zinc finger protein 361; Zinc finger protein 463;)
genome : 54,041,540 - 54,083,523 (41,984)
query : 1 - 4,119 (4,119/4,137)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000608935 (
ENST00000509047
)
(Zinc finger protein 331.)
genome : 54,041,540 - 54,080,074 (38,535)
query : 1 - 670 (670/670)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 8, cyto_golg 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000609443 (
ENST00000509585
)
(Zinc finger protein 331.)
genome : 54,041,559 - 54,074,984 (33,426)
query : 1 - 557 (557/562)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000605103 (
ENST00000504940
)
(Hypothetical short protein.)
genome : 54,041,577 - 54,042,611 (1,035)
query : 1 - 350 (350/350)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000075073
(
AF251515
)
(Zinc finger protein 331; C2H2-like zinc finger protein rearranged in thyroid adenomas; Zinc finger protein 361; Zinc finger protein 463;)
genome : 54,042,042 - 54,081,333 (39,292)
query : 9 - 1,895 (1,887/1,904)
6 exons
identity = 0.999
5'(1.000;0.985;1.000;1.000;1.000;1.000)3'
coverage = 0.996
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000723381 (
NM_001253800
)
(Zinc finger protein 331; C2H2-like zinc finger protein rearranged in thyroid adenomas; Zinc finger protein 361; Zinc finger protein 463;)
genome : 54,042,042 - 54,083,523 (41,482)
query : 1 - 4,078 (4,078/4,096)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000243008
(
AF412399
)
(Zinc finger protein 331.)
genome : 54,042,069 - 54,080,071 (38,003)
query : 1 - 599 (599/599)
6 exons
identity = 0.988
5'(0.964;0.985;1.000;1.000;1.000;0.992)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 8, nucl 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0018487
HIT000005748
(
AK022474
)
Representative transcript
(Conserved hypothetical protein.)
genome : 54,055,003 - 54,056,546 (1,544)
query : 1 - 1,546 (1,546/1,546)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, mito_nucl 12.5, nucl 10, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018487)
HIX0015423
HIT000612050 (
ENST00000512387
)
(Zinc finger protein 331; C2H2-like zinc finger protein rearranged in thyroid adenomas; Zinc finger protein 361; Zinc finger protein 463;)
genome : 54,057,784 - 54,081,643 (23,860)
query : 1 - 2,130 (2,130/2,130)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000610887 (
ENST00000511154
)
(Zinc finger protein 331; C2H2-like zinc finger protein rearranged in thyroid adenomas; Zinc finger protein 361; Zinc finger protein 463;)
genome : 54,057,793 - 54,081,640 (23,848)
query : 1 - 2,120 (2,120/2,120)
5 exons
identity = 0.992
5'(0.916;0.940;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000611278 (
ENST00000511567
)
(Zinc finger protein 331.)
genome : 54,057,855 - 54,080,129 (22,275)
query : 1 - 540 (540/540)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 6, extr 5, cysk 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000613550 (
ENST00000514022
)
(Zinc finger protein 331.)
genome : 54,057,867 - 54,080,314 (22,448)
query : 1 - 913 (913/913)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000723382 (
NM_001253801
)
(Zinc finger protein 331; C2H2-like zinc finger protein rearranged in thyroid adenomas; Zinc finger protein 361; Zinc finger protein 463;)
genome : 54,057,899 - 54,083,523 (25,625)
query : 1 - 3,895 (3,895/3,913)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000075798
(
AF272148
)
(Zinc finger protein 331; C2H2-like zinc finger protein rearranged in thyroid adenomas; Zinc finger protein 361; Zinc finger protein 463;)
genome : 54,057,899 - 54,081,643 (23,745)
query : 1 - 2,015 (2,015/2,015)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000612850 (
ENST00000513265
)
(Zinc finger protein 283.)
genome : 54,058,081 - 54,080,944 (22,864)
query : 1 - 739 (739/739)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000606046 (
ENST00000505949
)
(Zinc finger protein 571.)
genome : 54,058,081 - 54,080,346 (22,266)
query : 1 - 761 (761/761)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000243009
(
AF412400
)
(Zinc finger protein 331.)
genome : 54,058,494 - 54,080,071 (21,578)
query : 1 - 573 (573/573)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 8, nucl 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000602952 (
ENST00000502616
)
(Zinc finger protein 331.)
genome : 54,058,494 - 54,080,071 (21,578)
query : 1 - 573 (573/573)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 8, nucl 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000397951 (
NM_001079907
)
(Zinc finger protein 331; C2H2-like zinc finger protein rearranged in thyroid adenomas; Zinc finger protein 361; Zinc finger protein 463;)
genome : 54,058,561 - 54,083,523 (24,963)
query : 1 - 4,151 (4,151/4,171)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000243010
(
AF412401
)
(Zinc finger protein 331.)
genome : 54,058,561 - 54,080,013 (21,453)
query : 1 - 641 (641/641)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, nucl 7.5, extr 4, mito 2,
cysk 2, extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000604704 (
ENST00000504493
)
(Zinc finger protein 331.)
genome : 54,058,561 - 54,080,013 (21,453)
query : 1 - 641 (641/641)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, nucl 7.5, extr 4, mito 2,
cysk 2, extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000613528 (
ENST00000513999
)
(Zinc finger protein 331; C2H2-like zinc finger protein rearranged in thyroid adenomas; Zinc finger protein 361; Zinc finger protein 463;)
genome : 54,058,671 - 54,081,335 (22,665)
query : 1 - 1,890 (1,890/1,890)
5 exons
identity = 0.975
5'(0.849;0.832;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000243007
(
AF412398
)
(Zinc finger protein 331.)
genome : 54,058,741 - 54,080,007 (21,267)
query : 1 - 688 (688/688)
4 exons
identity = 0.997
5'(0.995;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 8, cyto_mito 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000605560 (
ENST00000505426
)
(Zinc finger protein 331.)
genome : 54,058,741 - 54,080,007 (21,267)
query : 1 - 688 (688/688)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 8, cyto_mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000087263
(
BC009365
)
(Zinc finger protein 420.)
genome : 54,059,096 - 54,080,739 (21,644)
query : 20 - 1,084 (1,065/1,084)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.982
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0015423
HIT000066984
(
AF086105
)
(Conserved hypothetical protein.)
genome : 54,082,219 - 54,082,836 (618)
query : 24 - 641 (618/650)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.964
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015423)
HIX0040086
HIT000089077
(
BC016813
)
Representative transcript
(Cationic amino acid transporter 3; CAT-3; CAT3; Cationic amino acid transporter y+; Solute carrier family 7 member 3;)
genome : 54,102,887 - 54,106,751 (3,865)
query : 5 - 1,219 (1,215/1,250)
4 exons
identity = 0.993
3'(0.989;1.000;1.000;1.000)5'
coverage = 0.995
InterPro :
IPR002293 : Amino acid/polyamine transporter I
IPR029485 : Cationic amino acid transporter, C-terminal
GO :
0003333 : Biological Process : amino acid transmembrane transport
0015171 : Molecular Function : amino acid transmembrane transporter activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040086)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC085672
Canis
sp. (Dog) : ENSCAFT00000004352
Oryzias
sp. (Medaka) : ENSORLT00000006062
Takifugu
sp. (Fugu) : SINFRUT00000140033
Pan
sp. (Chimpanzee) : XR_025490
HIX0040086
HIT000367214 (
NR_002938
)
(Cationic amino acid transporter 3; CAT-3; CAT3; Cationic amino acid transporter y+; Solute carrier family 7 member 3;)
genome : 54,102,885 - 54,106,751 (3,867)
query : 1 - 1,225 (1,225/1,252)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040086)
HIX0040086
HIT000259535
(
BC056248
)
(Cationic amino acid transporter, C-terminal domain containing protein.)
genome : 54,102,885 - 54,106,724 (3,840)
query : 5 - 1,193 (1,189/1,220)
4 exons
identity = 0.991
3'(0.988;0.991;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR029485 : Cationic amino acid transporter, C-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040086)
HIX0040086
HIT000711938 (
ENST00000600193
)
(Cationic amino acid transporter 3; CAT-3; CAT3; Cationic amino acid transporter y+; Solute carrier family 7 member 3;)
genome : 54,102,882 - 54,106,751 (3,870)
query : 1 - 1,228 (1,228/1,228)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040086)
HIX0226655
HIT000711459 (
ENST00000599707
)
(Amino acid/polyamine transporter I family protein.)
genome : 54,107,656 - 54,111,705 (4,050)
query : 1 - 766 (766/766)
5 exons
identity = 0.984
3'(1.000;0.979;0.986;1.000;0.969)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226655)
HIX0212952
HIT000610340_02 (
ENST00000510556
)
(Oligosaccharyl transferase complex, subunit OST3/OST6 family protein.)
genome : 54,120,029 - 54,120,454 (426)
query : 1 - 331 (331/331)
2 exons
identity = 0.958
5'(0.958;0.958)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212952)
HIX0212952
HIT000705418 (
ENST00000593607
)
(Oligosaccharyl transferase complex, subunit OST3/OST6 family protein.)
genome : 54,120,056 - 54,120,508 (453)
query : 1 - 453 (453/453)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212952)
HIX0059848
HIT000357930 (
ENST00000376650
)
(Homeobox, conserved site containing protein.)
genome : 54,135,310 - 54,140,263 (4,954)
query : 1 - 648 (648/648)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059848)
HIX0059848
HIT000365170 (
NM_001012728
)
(Homeobox, conserved site containing protein.)
genome : 54,135,310 - 54,140,263 (4,954)
query : 1 - 648 (648/648)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059848)
HIX0174332
HIT000470867_03 (
ENST00000384912
)
(Non-protein coding transcript.)
genome : 54,169,927 - 54,170,024 (98)
query : 1 - 98 (98/98)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174332)
HIX0174332
HIT000470868_03 (
ENST00000384913
)
(Non-protein coding transcript.)
genome : 54,169,927 - 54,170,024 (98)
query : 1 - 98 (98/98)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174332)
HIX0174332
HIT000658202_01 (
NR_030181
)
(Non-protein coding transcript.)
genome : 54,169,927 - 54,170,024 (98)
query : 1 - 98 (98/98)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174332)
HIX0174332
HIT000658201_01 (
NR_030180
)
(Non-protein coding transcript.)
genome : 54,169,933 - 54,170,016 (84)
query : 1 - 84 (84/84)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174332)
HIX0174333
HIT000470867_04 (
ENST00000384912
)
(Non-protein coding transcript.)
genome : 54,172,411 - 54,172,508 (98)
query : 1 - 98 (98/98)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174333)
HIX0174333
HIT000470868_04 (
ENST00000384913
)
(Non-protein coding transcript.)
genome : 54,172,411 - 54,172,508 (98)
query : 1 - 98 (98/98)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174333)
HIX0174333
HIT000658202_02 (
NR_030181
)
(Non-protein coding transcript.)
genome : 54,172,411 - 54,172,508 (98)
query : 1 - 98 (98/98)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174333)
HIX0174333
HIT000658201_02 (
NR_030180
)
(Non-protein coding transcript.)
genome : 54,172,417 - 54,172,500 (84)
query : 1 - 84 (84/84)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174333)
HIX0174493
HIT000506241 (
ENST00000408090
)
(Non-protein coding transcript.)
genome : 54,175,222 - 54,175,294 (73)
query : 1 - 73 (73/73)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174493)
HIX0174493
HIT000658491 (
NR_031568
)
(Non-protein coding transcript.)
genome : 54,175,222 - 54,175,294 (73)
query : 1 - 73 (73/73)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174493)
HIX0158444
HIT000471033 (
ENST00000385134
)
(Non-protein coding transcript.)
genome : 54,177,451 - 54,177,574 (124)
query : 1 - 124 (124/124)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158444)
HIX0158444
HIT000658203 (
NR_030182
)
(Non-protein coding transcript.)
genome : 54,177,451 - 54,177,574 (124)
query : 1 - 124 (124/124)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158444)
HIX0158418
HIT000470823 (
ENST00000384867
)
(Non-protein coding transcript.)
genome : 54,178,965 - 54,179,051 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158418)
HIX0158418
HIT000658204 (
NR_030183
)
(Non-protein coding transcript.)
genome : 54,178,965 - 54,179,051 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158418)
HIX0174330
HIT000470839_03 (
ENST00000384883
)
(Non-protein coding transcript.)
genome : 54,182,257 - 54,182,339 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174330)
HIX0174330
HIT000470840_03 (
ENST00000384884
)
(Non-protein coding transcript.)
genome : 54,182,257 - 54,182,339 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174330)
HIX0174330
HIT000658205_01 (
NR_030184
)
(Non-protein coding transcript.)
genome : 54,182,257 - 54,182,339 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174330)
HIX0174330
HIT000658208_01 (
NR_030187
)
(Non-protein coding transcript.)
genome : 54,182,257 - 54,182,339 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174330)
HIX0158438
HIT000470994 (
ENST00000385075
)
(Hypothetical short protein.)
genome : 54,183,194 - 54,183,277 (84)
query : 1 - 84 (84/84)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158438)
HIX0158438
HIT000658206 (
NR_030185
)
(Hypothetical short protein.)
genome : 54,183,194 - 54,183,277 (84)
query : 1 - 84 (84/84)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158438)
HIX0158414
HIT000470786 (
ENST00000384824
)
(Non-protein coding transcript.)
genome : 54,185,413 - 54,185,499 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158414)
HIX0158414
HIT000658207 (
NR_030186
)
(Non-protein coding transcript.)
genome : 54,185,413 - 54,185,499 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158414)
HIX0174331
HIT000470839_04 (
ENST00000384883
)
(Non-protein coding transcript.)
genome : 54,188,263 - 54,188,345 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174331)
HIX0174331
HIT000470840_04 (
ENST00000384884
)
(Non-protein coding transcript.)
genome : 54,188,263 - 54,188,345 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174331)
HIX0174331
HIT000658205_02 (
NR_030184
)
(Non-protein coding transcript.)
genome : 54,188,263 - 54,188,345 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174331)
HIX0174331
HIT000658208_02 (
NR_030187
)
(Non-protein coding transcript.)
genome : 54,188,263 - 54,188,345 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174331)
HIX0158434
HIT000470974 (
ENST00000385053
)
(Non-protein coding transcript.)
genome : 54,189,723 - 54,189,809 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158434)
HIX0158434
HIT000658209 (
NR_030188
)
(Non-protein coding transcript.)
genome : 54,189,723 - 54,189,809 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158434)
HIX0174500
HIT000506588 (
ENST00000408494
)
(Non-protein coding transcript.)
genome : 54,191,735 - 54,191,821 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174500)
HIX0174500
HIT000658496 (
NR_031573
)
(Non-protein coding transcript.)
genome : 54,191,735 - 54,191,821 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174500)
HIX0158417
HIT000470818 (
ENST00000384862
)
(Non-protein coding transcript.)
genome : 54,194,135 - 54,194,219 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158417)
HIX0158417
HIT000658210 (
NR_030189
)
(Non-protein coding transcript.)
genome : 54,194,135 - 54,194,219 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158417)
HIX0158415
HIT000470806 (
ENST00000384848
)
(Non-protein coding transcript.)
genome : 54,197,647 - 54,197,729 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158415)
HIX0158415
HIT000658211 (
NR_030190
)
(Non-protein coding transcript.)
genome : 54,197,647 - 54,197,729 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158415)
HIX0158439
HIT000471006 (
ENST00000385090
)
(Non-protein coding transcript.)
genome : 54,198,467 - 54,198,547 (81)
query : 1 - 81 (81/81)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158439)
HIX0158439
HIT000658212 (
NR_030191
)
(Non-protein coding transcript.)
genome : 54,198,467 - 54,198,547 (81)
query : 1 - 81 (81/81)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158439)
HIX0158426
HIT000470902 (
ENST00000384978
)
(Non-protein coding transcript.)
genome : 54,200,787 - 54,200,871 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158426)
HIX0158426
HIT000658213 (
NR_030192
)
(Non-protein coding transcript.)
genome : 54,200,787 - 54,200,871 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158426)
HIX0158454
HIT000471132 (
ENST00000385281
)
(Non-protein coding transcript.)
genome : 54,201,639 - 54,201,725 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158454)
HIX0158454
HIT000658214 (
NR_030193
)
(Non-protein coding transcript.)
genome : 54,201,639 - 54,201,725 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158454)
HIX0158425
HIT000470897 (
ENST00000384973
)
(Non-protein coding transcript.)
genome : 54,203,269 - 54,203,355 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158425)
HIX0158425
HIT000658215 (
NR_030194
)
(Non-protein coding transcript.)
genome : 54,203,269 - 54,203,355 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158425)
HIX0158427
HIT000470913 (
ENST00000384989
)
(Non-protein coding transcript.)
genome : 54,204,481 - 54,204,541 (61)
query : 1 - 61 (61/61)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158427)
HIX0158427
HIT000658216 (
NR_030195
)
(Non-protein coding transcript.)
genome : 54,204,481 - 54,204,541 (61)
query : 1 - 61 (61/61)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158427)
HIX0158443
HIT000471026 (
ENST00000385127
)
(Hypothetical short protein.)
genome : 54,205,991 - 54,206,073 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158443)
HIX0158443
HIT000658217 (
NR_030196
)
(Hypothetical short protein.)
genome : 54,205,991 - 54,206,073 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158443)
HIX0158420
HIT000470853 (
ENST00000384897
)
(Non-protein coding transcript.)
genome : 54,209,506 - 54,209,590 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158420)
HIX0158420
HIT000658218 (
NR_030197
)
(Non-protein coding transcript.)
genome : 54,209,506 - 54,209,590 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158420)
HIX0158430
HIT000470929 (
ENST00000385005
)
(Non-protein coding transcript.)
genome : 54,210,707 - 54,210,793 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158430)
HIX0158430
HIT000658219 (
NR_030198
)
(Non-protein coding transcript.)
genome : 54,210,707 - 54,210,793 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158430)
HIX0158413
HIT000470784 (
ENST00000384822
)
(Non-protein coding transcript.)
genome : 54,211,989 - 54,212,089 (101)
query : 1 - 101 (101/101)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158413)
HIX0158413
HIT000658220 (
NR_030199
)
(Non-protein coding transcript.)
genome : 54,211,989 - 54,212,089 (101)
query : 1 - 101 (101/101)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158413)
HIX0158448
HIT000471095 (
ENST00000385242
)
(Non-protein coding transcript.)
genome : 54,214,256 - 54,214,342 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158448)
HIX0158448
HIT000658221 (
NR_030200
)
(Non-protein coding transcript.)
genome : 54,214,256 - 54,214,342 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158448)
HIX0158428
HIT000470925 (
ENST00000385001
)
(Non-protein coding transcript.)
genome : 54,215,522 - 54,215,608 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158428)
HIX0158428
HIT000658222 (
NR_030201
)
(Non-protein coding transcript.)
genome : 54,215,522 - 54,215,608 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158428)
HIX0158450
HIT000471099 (
ENST00000385246
)
(Non-protein coding transcript.)
genome : 54,216,601 - 54,216,688 (88)
query : 1 - 88 (88/88)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158450)
HIX0158450
HIT000658223 (
NR_030202
)
(Non-protein coding transcript.)
genome : 54,216,601 - 54,216,688 (88)
query : 1 - 88 (88/88)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158450)
HIX0158412
HIT000470780 (
ENST00000384818
)
(Non-protein coding transcript.)
genome : 54,219,848 - 54,219,934 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158412)
HIX0158412
HIT000658224 (
NR_030203
)
(Non-protein coding transcript.)
genome : 54,219,848 - 54,219,934 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158412)
HIX0158429
HIT000470926 (
ENST00000385002
)
(Non-protein coding transcript.)
genome : 54,223,350 - 54,223,436 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158429)
HIX0158429
HIT000658225 (
NR_030204
)
(Non-protein coding transcript.)
genome : 54,223,350 - 54,223,436 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158429)
HIX0158440
HIT000471015 (
ENST00000385102
)
(Non-protein coding transcript.)
genome : 54,224,330 - 54,224,396 (67)
query : 1 - 67 (67/67)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158440)
HIX0158440
HIT000658226 (
NR_030205
)
(Non-protein coding transcript.)
genome : 54,224,330 - 54,224,396 (67)
query : 1 - 67 (67/67)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158440)
HIX0158435
HIT000470984 (
ENST00000385064
)
(Non-protein coding transcript.)
genome : 54,225,420 - 54,225,509 (90)
query : 1 - 90 (90/90)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158435)
HIX0158435
HIT000658227 (
NR_030206
)
(Non-protein coding transcript.)
genome : 54,225,420 - 54,225,509 (90)
query : 1 - 90 (90/90)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158435)
HIX0158445
HIT000471043 (
ENST00000385190
)
(Non-protein coding transcript.)
genome : 54,228,696 - 54,228,780 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158445)
HIX0158445
HIT000658228 (
NR_030207
)
(Non-protein coding transcript.)
genome : 54,228,696 - 54,228,780 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158445)
HIX0158472
HIT000474201 (
ENST00000390198
)
(Non-protein coding transcript.)
genome : 54,230,176 - 54,230,240 (65)
query : 1 - 65 (65/65)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158472)
HIX0158472
HIT000658229 (
NR_030208
)
(Non-protein coding transcript.)
genome : 54,230,176 - 54,230,240 (65)
query : 1 - 65 (65/65)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158472)
HIX0158451
HIT000471105 (
ENST00000385252
)
(Non-protein coding transcript.)
genome : 54,233,092 - 54,233,179 (88)
query : 1 - 88 (88/88)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158451)
HIX0158451
HIT000658230 (
NR_030209
)
(Non-protein coding transcript.)
genome : 54,233,092 - 54,233,179 (88)
query : 1 - 88 (88/88)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158451)
HIX0158436
HIT000470987 (
ENST00000385068
)
(Non-protein coding transcript.)
genome : 54,234,260 - 54,234,344 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158436)
HIX0158436
HIT000658231 (
NR_030210
)
(Non-protein coding transcript.)
genome : 54,234,260 - 54,234,344 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158436)
HIX0158431
HIT000470938 (
ENST00000385014
)
(Non-protein coding transcript.)
genome : 54,238,131 - 54,238,217 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158431)
HIX0158431
HIT000658232 (
NR_030211
)
(Non-protein coding transcript.)
genome : 54,238,131 - 54,238,217 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158431)
HIX0158446
HIT000471064 (
ENST00000385211
)
(Non-protein coding transcript.)
genome : 54,240,099 - 54,240,188 (90)
query : 1 - 90 (90/90)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158446)
HIX0158446
HIT000658233 (
NR_030212
)
(Non-protein coding transcript.)
genome : 54,240,099 - 54,240,188 (90)
query : 1 - 90 (90/90)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158446)
HIX0158424
HIT000470890 (
ENST00000384966
)
(Non-protein coding transcript.)
genome : 54,242,587 - 54,242,673 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158424)
HIX0158424
HIT000658234 (
NR_030213
)
(Non-protein coding transcript.)
genome : 54,242,587 - 54,242,673 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158424)
HIX0158441
HIT000471016 (
ENST00000385103
)
(Non-protein coding transcript.)
genome : 54,244,567 - 54,244,661 (95)
query : 1 - 95 (95/95)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158441)
HIX0158441
HIT000658235 (
NR_030214
)
(Non-protein coding transcript.)
genome : 54,244,567 - 54,244,661 (95)
query : 1 - 95 (95/95)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158441)
HIX0158442
HIT000471025 (
ENST00000385126
)
(Non-protein coding transcript.)
genome : 54,245,766 - 54,245,853 (88)
query : 1 - 88 (88/88)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158442)
HIX0158442
HIT000658236 (
NR_030215
)
(Non-protein coding transcript.)
genome : 54,245,766 - 54,245,853 (88)
query : 1 - 88 (88/88)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158442)
HIX0158423
HIT000470858 (
ENST00000384902
)
(Non-protein coding transcript.)
genome : 54,251,890 - 54,251,976 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158423)
HIX0158423
HIT000658237 (
NR_030216
)
(Non-protein coding transcript.)
genome : 54,251,890 - 54,251,976 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158423)
HIX0212956
HIT000615785 (
ENST00000516382
)
(Non-protein coding transcript.)
genome : 54,253,105 - 54,253,205 (101)
query : 1 - 101 (101/101)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212956)
HIX0158437
HIT000470990 (
ENST00000385071
)
(Non-protein coding transcript.)
genome : 54,254,465 - 54,254,551 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158437)
HIX0158437
HIT000658238 (
NR_030217
)
(Non-protein coding transcript.)
genome : 54,254,465 - 54,254,551 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158437)
HIX0158452
HIT000471110 (
ENST00000385257
)
(Non-protein coding transcript.)
genome : 54,255,651 - 54,255,735 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158452)
HIX0158452
HIT000658239 (
NR_030218
)
(Non-protein coding transcript.)
genome : 54,255,651 - 54,255,735 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158452)
HIX0158449
HIT000471097 (
ENST00000385244
)
(Non-protein coding transcript.)
genome : 54,257,272 - 54,257,356 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158449)
HIX0158449
HIT000658240 (
NR_030219
)
(Non-protein coding transcript.)
genome : 54,257,272 - 54,257,356 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158449)
HIX0158432
HIT000470956 (
ENST00000385033
)
(Non-protein coding transcript.)
genome : 54,259,995 - 54,260,084 (90)
query : 1 - 90 (90/90)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158432)
HIX0158432
HIT000658241 (
NR_030220
)
(Non-protein coding transcript.)
genome : 54,259,995 - 54,260,084 (90)
query : 1 - 90 (90/90)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158432)
HIX0174503
HIT000506707 (
ENST00000408621
)
(Non-protein coding transcript.)
genome : 54,261,486 - 54,261,572 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174503)
HIX0174503
HIT000658609 (
NR_031696
)
(Non-protein coding transcript.)
genome : 54,261,486 - 54,261,572 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174503)
HIX0158419
HIT000470844 (
ENST00000384888
)
(Non-protein coding transcript.)
genome : 54,264,387 - 54,264,476 (90)
query : 1 - 90 (90/90)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158419)
HIX0158419
HIT000658242 (
NR_030221
)
(Non-protein coding transcript.)
genome : 54,264,387 - 54,264,476 (90)
query : 1 - 90 (90/90)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158419)
HIX0027603
HIT000709396 (
ENST00000597619
)
(Conserved hypothetical protein.)
genome : 54,265,215 - 54,267,453 (2,239)
query : 1 - 2,239 (2,239/2,239)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 4.5, cyto_mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027603)
HIX0027603
HIT000047687
(
AK127814
)
Representative transcript
(Conserved hypothetical protein.)
genome : 54,265,215 - 54,267,452 (2,238)
query : 1 - 2,233 (2,233/2,233)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, pero 3, cyto 2, mito 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027603)
HIX0027603
HIT000470914 (
ENST00000384990
)
(Non-protein coding transcript.)
genome : 54,265,598 - 54,265,684 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027603)
HIX0027603
HIT000658243 (
NR_030222
)
(Non-protein coding transcript.)
genome : 54,265,598 - 54,265,684 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027603)
HIX0174582
HIT000539678 (
ENST00000441744
)
(Conserved hypothetical protein.)
genome : 54,271,225 - 54,271,807 (583)
query : 1 - 256 (256/256)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174582)
HIX0174512
HIT000511242 (
ENST00000413308
)
(Conserved hypothetical protein.)
genome : 54,275,760 - 54,276,534 (775)
query : 1 - 775 (775/775)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12.3333, cyto_plas 8.5, extr 8,
nucl 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174512)
HIX0174536
HIT000521030 (
ENST00000423096
)
(Conserved hypothetical protein.)
genome : 54,278,853 - 54,279,136 (284)
query : 1 - 284 (284/284)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14, nucl 7.5, extr 2, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174536)
HIX0226098
HIT000706957 (
ENST00000595160
)
(Hypothetical short protein.)
genome : 54,290,851 - 54,291,423 (573)
query : 1 - 446 (446/446)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 12, extr 10, cyto 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226098)
HIX0137486
HIT000343790 (
ENST00000362161
)
(Non-protein coding transcript.)
genome : 54,290,929 - 54,290,995 (67)
query : 1 - 67 (67/67)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0137486)
HIX0137486
HIT000658126 (
NR_029864
)
(Non-protein coding transcript.)
genome : 54,290,929 - 54,290,995 (67)
query : 1 - 67 (67/67)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0137486)
HIX0226098
HIT000725972 (
NR_039909
)
(Non-protein coding transcript.)
genome : 54,290,931 - 54,290,996 (66)
query : 1 - 66 (66/66)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226098)
HIX0137487
HIT000343854 (
ENST00000362225
)
(Non-protein coding transcript.)
genome : 54,291,144 - 54,291,210 (67)
query : 1 - 67 (67/67)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0137487)
HIX0137487
HIT000658127 (
NR_029865
)
(Non-protein coding transcript.)
genome : 54,291,144 - 54,291,210 (67)
query : 1 - 67 (67/67)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0137487)
HIX0137488
HIT000343902 (
ENST00000362273
)
(Non-protein coding transcript.)
genome : 54,291,959 - 54,292,027 (69)
query : 1 - 69 (69/69)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0137488)
HIX0137488
HIT000658128 (
NR_029866
)
(Non-protein coding transcript.)
genome : 54,291,959 - 54,292,027 (69)
query : 1 - 69 (69/69)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0137488)
HIX0226583
HIT000709199 (
ENST00000597420
)
(Hypothetical short protein.)
genome : 54,292,036 - 54,292,422 (387)
query : 1 - 387 (387/387)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226583)
HIX0015424
HIT000212921 (
NM_144687
)
(NACHT, LRR and PYD domains-containing protein 12; Monarch-1; PYRIN-containing APAF1-like protein 7; Regulated by nitric oxide;)
genome : 54,296,856 - 54,327,657 (30,802)
query : 1 - 3,862 (3,862/3,880)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, cyto 9.5, plas 4,
mito_pero 3, mito 2.5, pero 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015424)
HIX0015424
HIT000725375 (
NM_001277126
)
(NACHT, LRR and PYD domains-containing protein 12; Monarch-1; PYRIN-containing APAF1-like protein 7; Regulated by nitric oxide;)
genome : 54,296,856 - 54,327,657 (30,802)
query : 1 - 3,865 (3,865/3,883)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, cyto 9.5, plas 4,
mito_pero 3, mito 2.5, pero 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015424)
HIX0015424
HIT000725378 (
NM_001277129
)
(NACHT, LRR and PYD domains-containing protein 12 isoform 4.)
genome : 54,296,856 - 54,327,657 (30,802)
query : 1 - 3,691 (3,691/3,709)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, cyto 9.5, plas 4,
mito_pero 3, mito 2.5, pero 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015424)
HIX0015424
HIT000084386
(
AY095146
)
Representative transcript
(NACHT, LRR and PYD domains-containing protein 12; Monarch-1; PYRIN-containing APAF1-like protein 7; Regulated by nitric oxide;)
genome : 54,296,856 - 54,327,593 (30,738)
query : 12 - 3,809 (3,798/3,827)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.994;0.994;1.000;
1.000;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR001611 : Leucine-rich repeat
IPR004020 : DAPIN domain
IPR007111 : NACHT nucleoside triphosphatase
IPR011029 : Death-like domain
IPR029495 : NACHT-associated domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, cyto 9.5, plas 4,
mito_pero 3, mito 2.5, pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015424)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC116253
Canis
sp. (Dog) : ENSCAFT00000004310
Monodelphis
sp. (Opossum) : ENSMODT00000015968
Pongo
sp. (Orangutan) : ENSPPYT00000012051
Tetraodon
sp. (Tetraodon) : GSTENT00012155001
Takifugu
sp. (Fugu) : SINFRUT00000171407
Rattus
sp. (Rat) : XM_001066862
Equus
sp. (Horse) : XM_001494403
Pan
sp. (Chimpanzee) : XM_524387
Bos
sp. (Cow) : XM_600291
HIX0015424
HIT000084799
(
AY154467
)
(NACHT, LRR and PYD domains-containing protein 12; Monarch-1; PYRIN-containing APAF1-like protein 7; Regulated by nitric oxide;)
genome : 54,296,856 - 54,327,593 (30,738)
query : 12 - 3,809 (3,798/3,827)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.994;0.994;1.000;
1.000;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR001611 : Leucine-rich repeat
IPR004020 : DAPIN domain
IPR007111 : NACHT nucleoside triphosphatase
IPR011029 : Death-like domain
IPR029495 : NACHT-associated domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, cyto 9.5, plas 4,
mito_pero 3, mito 2.5, pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015424)
HIX0015424
HIT000308154 (
ENST00000351894
)
(NACHT, LRR and PYD domains-containing protein 12; Monarch-1; PYRIN-containing APAF1-like protein 7; Regulated by nitric oxide;)
genome : 54,296,857 - 54,327,648 (30,792)
query : 1 - 3,516 (3,516/3,516)
8 exons
identity = 0.999
3'(1.000;1.000;0.989;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, cyto 9.5, plas 4,
mito_pero 3, mito 2.5, pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015424)
HIX0015424
HIT000308600 (
ENST00000354278
)
(NACHT, LRR and PYD domains-containing protein 12; Monarch-1; PYRIN-containing APAF1-like protein 7; Regulated by nitric oxide;)
genome : 54,296,857 - 54,327,648 (30,792)
query : 1 - 3,345 (3,345/3,345)
7 exons
identity = 0.999
3'(1.000;0.983;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11, cyto 8.5, plas 4,
mito_pero 3, mito 2.5, pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015424)
HIX0015424
HIT000634207 (
ENST00000535162
)
(NACHT, LRR and PYD domains-containing protein 12; Monarch-1; PYRIN-containing APAF1-like protein 7; Regulated by nitric oxide;)
genome : 54,296,857 - 54,327,648 (30,792)
query : 1 - 3,681 (3,681/3,681)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, cyto 9.5, plas 4,
mito_pero 3, mito 2.5, pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015424)
HIX0015424
HIT000123743 (
ENST00000324134
)
(NACHT, LRR and PYD domains-containing protein 12; Monarch-1; PYRIN-containing APAF1-like protein 7; Regulated by nitric oxide;)
genome : 54,296,857 - 54,327,597 (30,741)
query : 1 - 3,801 (3,801/3,801)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, cyto 9.5, plas 4,
mito_pero 3, mito 2.5, pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015424)
HIX0015424
HIT000312333 (
ENST00000358661
)
(NACHT, LRR and PYD domains-containing protein 12 isoform 4.)
genome : 54,296,857 - 54,311,959 (15,103)
query : 1 - 2,619 (2,619/2,619)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, extr 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015424)
HIX0015424
HIT000084469
(
AY116204
)
(NACHT, LRR and PYD domains-containing protein 12; Monarch-1; PYRIN-containing APAF1-like protein 7; Regulated by nitric oxide;)
genome : 54,296,997 - 54,327,648 (30,652)
query : 1 - 3,715 (3,715/3,731)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.996)5'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR004020 : DAPIN domain
IPR007111 : NACHT nucleoside triphosphatase
IPR011029 : Death-like domain
IPR029495 : NACHT-associated domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, cyto 9.5, plas 4,
mito_pero 3, mito 2.5, pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015424)
HIX0015424
HIT000084470
(
AY116205
)
(NACHT, LRR and PYD domains-containing protein 12 isoform 3.)
genome : 54,296,997 - 54,327,648 (30,652)
query : 1 - 3,547 (3,547/3,563)
9 exons
identity = 0.999
3'(1.000;0.983;1.000;1.000;1.000;1.000;1.000;
1.000;0.996)5'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR004020 : DAPIN domain
IPR007111 : NACHT nucleoside triphosphatase
IPR011029 : Death-like domain
IPR029495 : NACHT-associated domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, cyto 9.5, plas 4,
mito_pero 3, mito 2.5, pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015424)
HIX0015424
HIT000084471
(
AY116206
)
(NACHT, LRR and PYD domains-containing protein 12; Monarch-1; PYRIN-containing APAF1-like protein 7; Regulated by nitric oxide;)
genome : 54,296,997 - 54,327,648 (30,652)
query : 1 - 3,379 (3,379/3,395)
8 exons
identity = 0.999
3'(1.000;1.000;0.983;1.000;1.000;1.000;1.000;
0.996)5'
coverage = 1.000
InterPro :
IPR004020 : DAPIN domain
IPR007111 : NACHT nucleoside triphosphatase
IPR011029 : Death-like domain
IPR029495 : NACHT-associated domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, cyto 9.5, plas 4,
mito_pero 3, mito 2.5, pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015424)
HIX0015424
HIT000084472
(
AY116207
)
(NACHT, LRR and PYD domains-containing protein 12; Monarch-1; PYRIN-containing APAF1-like protein 7; Regulated by nitric oxide;)
genome : 54,296,997 - 54,327,648 (30,652)
query : 1 - 3,205 (3,205/3,221)
7 exons
identity = 0.999
3'(1.000;0.994;1.000;1.000;1.000;1.000;0.996)5'
coverage = 1.000
InterPro :
IPR004020 : DAPIN domain
IPR007111 : NACHT nucleoside triphosphatase
IPR011029 : Death-like domain
IPR029495 : NACHT-associated domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11, cyto 8.5, plas 4,
mito_pero 3, mito 2.5, pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015424)
HIX0015424
HIT000074599
(
AF231021
)
(NACHT, LRR and PYD domains-containing protein 3; Cold autoinflammatory syndrome 1 protein homolog; Cryopyrin; Mast cell maturation-associated-inducible protein 1; PYRIN-containing APAF1-like protein 1;)
genome : 54,296,997 - 54,311,959 (14,963)
query : 1 - 2,478 (2,478/2,494)
7 exons
identity = 0.992
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.983)5'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR003590 : Leucine-rich repeat, ribonuclease inhibitor subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, extr 7, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015424)
HIX0015424
HIT000020315
(
AK095460
)
(NACHT, LRR and PYD domains-containing protein 12; Monarch-1; PYRIN-containing APAF1-like protein 7; Regulated by nitric oxide;)
genome : 54,296,996 - 54,327,571 (30,576)
query : 2 - 3,466 (3,465/3,466)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;0.994;0.994;1.000;0.999;
1.000;0.995)5'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR004020 : DAPIN domain
IPR007111 : NACHT nucleoside triphosphatase
IPR011029 : Death-like domain
IPR029495 : NACHT-associated domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, cyto 9.5, plas 4,
mito_pero 3, mito 2.5, pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015424)
HIX0015424
HIT000475276 (
ENST00000391775
)
(NACHT, LRR and PYD domains-containing protein 12 isoform 4.)
genome : 54,296,996 - 54,327,571 (30,576)
query : 1 - 3,465 (3,465/3,465)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, cyto 9.5, plas 4,
mito_pero 3, mito 2.5, pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015424)
HIX0015424
HIT000307202 (
ENST00000345770
)
(NACHT, LRR and PYD domains-containing protein 12 isoform 3.)
genome : 54,296,997 - 54,327,648 (30,652)
query : 1 - 3,547 (3,547/3,547)
9 exons
identity = 0.999
3'(1.000;0.983;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, cyto 9.5, plas 4,
mito_pero 3, mito 2.5, pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015424)
HIX0015424
HIT000475273 (
ENST00000391772
)
(NACHT, LRR and PYD domains-containing protein 12; Monarch-1; PYRIN-containing APAF1-like protein 7; Regulated by nitric oxide;)
genome : 54,296,997 - 54,327,648 (30,652)
query : 1 - 3,205 (3,205/3,205)
7 exons
identity = 1.000
3'(1.000;0.994;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11, cyto 8.5, plas 4,
mito_pero 3, mito 2.5, pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015424)
HIX0015424
HIT000475274 (
ENST00000391773
)
(NACHT, LRR and PYD domains-containing protein 12; Monarch-1; PYRIN-containing APAF1-like protein 7; Regulated by nitric oxide;)
genome : 54,296,997 - 54,327,648 (30,652)
query : 1 - 3,715 (3,715/3,715)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, cyto 9.5, plas 4,
mito_pero 3, mito 2.5, pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015424)
HIX0015424
HIT000596376 (
ENST00000492915
)
(NACHT, LRR and PYD domains-containing protein 3; Cold autoinflammatory syndrome 1 protein homolog; Cryopyrin; Mast cell maturation-associated-inducible protein 1; PYRIN-containing APAF1-like protein 1;)
genome : 54,296,997 - 54,311,959 (14,963)
query : 1 - 2,479 (2,479/2,479)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, extr 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015424)
HIX0015424
HIT000040422
(
BC028069
)
(NACHT, LRR and PYD domains-containing protein 12; Monarch-1; PYRIN-containing APAF1-like protein 7; Regulated by nitric oxide;)
genome : 54,297,138 - 54,327,547 (30,410)
query : 1 - 3,470 (3,470/3,507)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR004020 : DAPIN domain
IPR007111 : NACHT nucleoside triphosphatase
IPR011029 : Death-like domain
IPR029495 : NACHT-associated domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, cyto 9.5, plas 4,
mito_pero 3, mito 2.5, pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015424)
HIX0015424
HIT000423569
(
AK290772
)
(NACHT, LRR and PYD domains-containing protein 12 isoform 3.)
genome : 54,297,331 - 54,327,439 (30,109)
query : 1 - 3,169 (3,169/3,169)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR004020 : DAPIN domain
IPR007111 : NACHT nucleoside triphosphatase
IPR011029 : Death-like domain
IPR029495 : NACHT-associated domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, cyto 9.5, plas 4,
mito_pero 3, mito 2.5, pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015424)
HIX0015425
HIT000014583
(
AK057976
)
Representative transcript
(Activating molecule in BECN1-regulated autophagy protein 1 isoform 1.)
genome : 54,356,808 - 54,358,218 (1,411)
query : 2 - 1,412 (1,411/1,412)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015425)
HIX0174619
HIT000553769 (
ENST00000455835
)
(Non-protein coding transcript.)
genome : 54,357,835 - 54,372,361 (14,527)
query : 1 - 439 (439/439)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174619)
HIX0174534
HIT000519979 (
ENST00000422045
)
(Conserved hypothetical protein.)
genome : 54,368,017 - 54,369,394 (1,378)
query : 1 - 555 (555/555)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3, mito 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174534)
HIX0015426
HIT000519271 (
ENST00000421337
)
(Myeloid-associated differentiation marker.)
genome : 54,369,477 - 54,377,510 (8,034)
query : 1 - 1,009 (1,009/1,009)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015426)
HIX0015426
HIT000365651 (
NM_001020820
)
(Myeloid-associated differentiation marker; Protein SB135;)
genome : 54,369,611 - 54,379,688 (10,078)
query : 1 - 3,053 (3,053/3,077)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015426)
HIX0015426
HIT000130305 (
ENST00000336967
)
(Myeloid-associated differentiation marker; Protein SB135;)
genome : 54,369,611 - 54,379,682 (10,072)
query : 1 - 3,047 (3,047/3,047)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015426)
HIX0015426
HIT000212354 (
NM_138373
)
(Myeloid-associated differentiation marker; Protein SB135;)
genome : 54,371,137 - 54,379,688 (8,552)
query : 1 - 3,053 (3,053/3,077)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015426)
HIX0015426
HIT000365650 (
NM_001020819
)
(Myeloid-associated differentiation marker; Protein SB135;)
genome : 54,371,137 - 54,379,688 (8,552)
query : 1 - 3,117 (3,117/3,141)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015426)
HIX0015426
HIT000335205
(
BC095412
)
Representative transcript
(Myeloid-associated differentiation marker; Protein SB135;)
genome : 54,371,137 - 54,379,683 (8,547)
query : 1 - 3,032 (3,032/3,047)
3 exons
identity = 0.992
5'(1.000;1.000;0.991)3'
coverage = 1.000
InterPro :
IPR008253 : Marvel domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015426)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK159160
Bos
sp. (Cow) : BC120130
Rattus
sp. (Rat) : BC128719
Pongo
sp. (Orangutan) : ENSPPYT00000012052
Pan
sp. (Chimpanzee) : ENSPTRT00000021288
Takifugu
sp. (Fugu) : SINFRUT00000157223
Macaca
sp. (Macaque) : XM_001116015
Danio
sp. (Zebrafish) : XM_001344498
Equus
sp. (Horse) : XM_001493819
Canis
sp. (Dog) : XM_849198
HIX0015426
HIT000475271 (
ENST00000391770
)
(Myeloid-associated differentiation marker; Protein SB135;)
genome : 54,371,137 - 54,379,691 (8,555)
query : 1 - 3,056 (3,056/3,056)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015426)
HIX0015426
HIT000475272 (
ENST00000391771
)
(Myeloid-associated differentiation marker; Protein SB135;)
genome : 54,371,137 - 54,379,682 (8,546)
query : 1 - 3,111 (3,111/3,111)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015426)
HIX0015426
HIT000082311
(
AK075276
)
(Myeloid-associated differentiation marker; Protein SB135;)
genome : 54,371,137 - 54,378,795 (7,659)
query : 1 - 2,149 (2,149/2,149)
3 exons
identity = 0.991
5'(0.984;0.988;0.992)3'
coverage = 1.000
InterPro :
IPR008253 : Marvel domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015426)
HIX0015426
HIT000489024
(
AK294400
)
(Myeloid-associated differentiation marker; Protein SB135;)
genome : 54,371,137 - 54,378,122 (6,986)
query : 1 - 1,377 (1,377/1,377)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR008253 : Marvel domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015426)
HIX0015426
HIT000536934 (
ENST00000439000
)
(Myeloid-associated differentiation marker.)
genome : 54,371,137 - 54,377,561 (6,425)
query : 1 - 841 (841/841)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015426)
HIX0015426
HIT000546354 (
ENST00000448420
)
(Myeloid-associated differentiation marker.)
genome : 54,371,137 - 54,377,348 (6,212)
query : 1 - 777 (777/777)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015426)
HIX0015426
HIT000018856
(
AK093999
)
(Myeloid-associated differentiation marker; Protein SB135;)
genome : 54,371,139 - 54,378,795 (7,657)
query : 1 - 2,090 (2,090/2,090)
4 exons
identity = 0.989
5'(1.000;1.000;1.000;0.986)3'
coverage = 1.000
InterPro :
IPR008253 : Marvel domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015426)
HIX0015426
HIT000434777
(
AK316566
)
(Myeloid-associated differentiation marker; Protein SB135;)
genome : 54,371,141 - 54,377,752 (6,612)
query : 1 - 1,113 (1,113/1,113)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008253 : Marvel domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015426)
HIX0015426
HIT000252626
(
AY358582
)
(Myeloid-associated differentiation marker; Protein SB135;)
genome : 54,371,155 - 54,378,795 (7,641)
query : 1 - 2,128 (2,128/2,128)
3 exons
identity = 0.991
5'(1.000;1.000;0.990)3'
coverage = 1.000
InterPro :
IPR008253 : Marvel domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015426)
HIX0015426
HIT000242628
(
AF087882
)
(Myeloid-associated differentiation marker.)
genome : 54,372,660 - 54,379,688 (7,029)
query : 1 - 3,168 (3,168/3,192)
3 exons
identity = 0.991
5'(0.995;1.000;0.990)3'
coverage = 1.000
InterPro :
IPR008253 : Marvel domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015426)
HIX0015426
HIT000365652 (
NM_001020821
)
(Myeloid-associated differentiation marker; Protein SB135;)
genome : 54,372,660 - 54,379,688 (7,029)
query : 1 - 3,185 (3,185/3,209)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015426)
HIX0015426
HIT000475270 (
ENST00000391769
)
(Myeloid-associated differentiation marker; Protein SB135;)
genome : 54,372,660 - 54,379,689 (7,030)
query : 1 - 3,186 (3,186/3,186)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015426)
HIX0015426
HIT000036454
(
BC013995
)
(Myeloid-associated differentiation marker; Protein SB135;)
genome : 54,372,693 - 54,377,873 (5,181)
query : 1 - 1,492 (1,492/1,550)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.999
InterPro :
IPR008253 : Marvel domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015426)
HIX0015426
HIT000475269 (
ENST00000391768
)
(Myeloid-associated differentiation marker; Protein SB135;)
genome : 54,372,693 - 54,377,873 (5,181)
query : 1 - 1,492 (1,492/1,492)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015426)
HIX0015426
HIT000365649 (
NM_001020818
)
(Myeloid-associated differentiation marker; Protein SB135;)
genome : 54,372,781 - 54,379,688 (6,908)
query : 1 - 3,219 (3,219/3,243)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015426)
HIX0015426
HIT000083531
(
AY037147
)
(Myeloid-associated differentiation marker; Protein SB135;)
genome : 54,372,932 - 54,379,689 (6,758)
query : 6 - 2,074 (2,069/2,080)
3 exons
identity = 0.988
5'(0.975;0.991;0.985)3'
coverage = 0.995
InterPro :
IPR008253 : Marvel domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015426)
HIX0015426
HIT000512423 (
ENST00000414489
)
(Myeloid-associated differentiation marker.)
genome : 54,373,019 - 54,377,223 (4,205)
query : 1 - 592 (592/592)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015426)
HIX0015426
HIT000010965
(
AK027693
)
(Myeloid-associated differentiation marker.)
genome : 54,376,996 - 54,379,691 (2,696)
query : 1 - 2,676 (2,676/2,676)
1 exon
identity = 0.990
5'(0.990)3'
coverage = 1.000
InterPro :
IPR008253 : Marvel domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015426)
HIX0174513
HIT000511430 (
ENST00000413496
)
(Conserved hypothetical protein.)
genome : 54,377,880 - 54,379,303 (1,424)
query : 1 - 423 (423/423)
2 exons
identity = 0.991
3'(0.981;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174513)
HIX0015426
HIT000250400
(
AL357205
)
(Hypothetical short protein.)
genome : 54,379,198 - 54,379,688 (491)
query : 1 - 489 (489/516)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13, cyto 5.5, cyto_nucl 5.5, plas 5, nucl 4.5,
E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015426)
HIX0027463
HIT000583162 (
ENST00000479081
)
(Protein kinase C gamma type; PKC-gamma; EC=2.7.11.13; Fragment;)
genome : 54,382,444 - 54,393,184 (10,741)
query : 1 - 571 (571/571)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.13
KEGG pathway :
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 4.5, cyto_nucl 4.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027463)
HIX0027463
HIT000578691 (
ENST00000474397
)
(Protein kinase C gamma type; PKC-gamma; EC=2.7.11.13;)
genome : 54,385,038 - 54,395,081 (10,044)
query : 1 - 678 (678/678)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.13
KEGG pathway :
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 12.5, cyto 9.5, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027463)
HIX0027463
HIT000491036
(
AK296412
)
(Protein kinase C gamma type; PKC-gamma; EC=2.7.11.13;)
genome : 54,385,430 - 54,410,293 (24,864)
query : 1 - 2,557 (2,557/2,557)
18 exons
identity = 0.998
5'(0.996;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;1.000;0.989;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.13
KEGG pathway :
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000008 : C2 domain
IPR000961 : AGC-kinase, C-terminal
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR017892 : Protein kinase, C-terminal
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9, pero 6, nucl 5, mito 5, mito_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027463)
HIX0027463
HIT000491058
(
AK296434
)
(Protein kinase C gamma type; PKC-gamma; EC=2.7.11.13;)
genome : 54,385,454 - 54,410,441 (24,988)
query : 4 - 2,582 (2,579/2,582)
19 exons
identity = 0.998
5'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
0.989;1.000;0.993;1.000;1.000;1.000;0.993;
1.000;1.000;1.000;1.000;0.995)3'
coverage = 0.999
EC number :
EC 2.7.11.13
KEGG pathway :
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000008 : C2 domain
IPR000961 : AGC-kinase, C-terminal
IPR002219 : Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR017892 : Protein kinase, C-terminal
IPR020454 : Diacylglycerol/phorbol-ester binding
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 12.5, nucl 8, extr 3, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027463)
HIX0027463
HIT000497582
(
AK302958
)
(Protein kinase C gamma type; PKC-gamma; EC=2.7.11.13;)
genome : 54,385,453 - 54,401,797 (16,345)
query : 1 - 1,404 (1,404/1,404)
10 exons
identity = 0.999
5'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.13
KEGG pathway :
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000008 : C2 domain
IPR002219 : Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
IPR020454 : Diacylglycerol/phorbol-ester binding
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10.5, cyto_nucl 10.5, extr 10, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027463)
HIX0027463
HIT000635089 (
ENST00000536044
)
(Protein kinase C gamma type; PKC-gamma; EC=2.7.11.13;)
genome : 54,385,453 - 54,401,797 (16,345)
query : 1 - 1,404 (1,404/1,404)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.13
KEGG pathway :
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10.5, cyto_nucl 10.5, extr 10, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027463)
HIX0027463
HIT000639458 (
ENST00000540413
)
(Protein kinase C gamma type; PKC-gamma; EC=2.7.11.13;)
genome : 54,385,454 - 54,410,441 (24,988)
query : 1 - 2,579 (2,579/2,579)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.13
KEGG pathway :
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 12.5, nucl 8, extr 3, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027463)
HIX0027463
HIT000199615 (
NM_002739
)
(Protein kinase C gamma type; PKC-gamma; EC=2.7.11.13;)
genome : 54,385,467 - 54,410,901 (25,435)
query : 1 - 3,128 (3,128/3,143)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.13
KEGG pathway :
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13.5, nucl 10, E.R. 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027463)
HIX0027463
HIT000108894 (
ENST00000263431
)
(Protein kinase C gamma type; PKC-gamma; EC=2.7.11.13;)
genome : 54,385,467 - 54,410,906 (25,440)
query : 1 - 3,133 (3,133/3,133)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.13
KEGG pathway :
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13.5, nucl 10, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027463)
HIX0027463
HIT000431168
(
AK312302
)
(Protein kinase C gamma type; PKC-gamma; EC=2.7.11.13;)
genome : 54,385,476 - 54,410,149 (24,674)
query : 1 - 2,367 (2,367/2,367)
18 exons
identity = 0.999
5'(0.998;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.13
KEGG pathway :
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000008 : C2 domain
IPR000961 : AGC-kinase, C-terminal
IPR002219 : Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR017892 : Protein kinase, C-terminal
IPR020454 : Diacylglycerol/phorbol-ester binding
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13.5, nucl 10, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027463)
HIX0027463
HIT000517420 (
ENST00000419486
)
(Protein kinase C gamma type; PKC-gamma; EC=2.7.11.13; Fragment;)
genome : 54,385,483 - 54,393,233 (7,751)
query : 1 - 560 (560/560)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.13
KEGG pathway :
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027463)
HIX0027463
HIT000078121
(
AF345987
)
(Protein kinase C gamma type; PKC-gamma; EC=2.7.11.13;)
genome : 54,385,554 - 54,410,366 (24,813)
query : 1 - 2,506 (2,506/2,506)
18 exons
identity = 0.998
5'(0.992;1.000;1.000;0.982;0.992;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.13
KEGG pathway :
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000008 : C2 domain
IPR000961 : AGC-kinase, C-terminal
IPR002219 : Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR017892 : Protein kinase, C-terminal
IPR020454 : Diacylglycerol/phorbol-ester binding
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13.5, nucl 10, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027463)
HIX0027463
HIT000194284
(
M13977
)
(Protein kinase C gamma type; PKC-gamma; EC=2.7.11.13;)
genome : 54,385,554 - 54,396,657 (11,104)
query : 1 - 1,146 (1,146/1,146)
9 exons
identity = 0.994
5'(0.992;1.000;1.000;0.982;0.992;1.000;1.000;
0.989;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.13
KEGG pathway :
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000008 : C2 domain
IPR002219 : Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
IPR020454 : Diacylglycerol/phorbol-ester binding
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 10, nucl 5, cyto_mito 5, cyto_plas 5,
cyto_golg 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027463)
HIX0027463
HIT000053264
(
BC047876
)
Representative transcript
(Protein kinase C gamma type; PKC-gamma; EC=2.7.11.13;)
genome : 54,385,563 - 54,410,901 (25,339)
query : 1 - 3,032 (3,032/3,096)
18 exons
identity = 1.000
5'(1.000;1.000;0.988;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.13
KEGG pathway :
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000008 : C2 domain
IPR000961 : AGC-kinase, C-terminal
IPR002219 : Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR017892 : Protein kinase, C-terminal
IPR020454 : Diacylglycerol/phorbol-ester binding
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13.5, nucl 10, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027463)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169802
Gallus
sp. (Chicken) : AJ851529
Rattus
sp. (Rat) : BC089226
Oryzias
sp. (Medaka) : ENSORLT00000009867
Oryzias
sp. (Medaka) : ENSORLT00000014379
Pongo
sp. (Orangutan) : ENSPPYT00000012053
Tetraodon
sp. (Tetraodon) : GSTENT00015420001
Mus
sp. (Mouse) : L28035
Bos
sp. (Cow) : M13976
Takifugu
sp. (Fugu) : SINFRUT00000134916
Takifugu
sp. (Fugu) : SINFRUT00000144738
Monodelphis
sp. (Opossum) : XM_001363115
Equus
sp. (Horse) : XM_001493695
Danio
sp. (Zebrafish) : XM_001921680
Danio
sp. (Zebrafish) : XM_001922097
Canis
sp. (Dog) : XM_541432
Pan
sp. (Chimpanzee) : XR_025332
HIX0027463
HIT000329606
(
AB209671
)
(Protein kinase C gamma type; PKC-gamma; EC=2.7.11.13;)
genome : 54,385,719 - 54,399,315 (13,597)
query : 1 - 2,394 (2,394/2,394)
9 exons
identity = 0.997
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.900)3'
coverage = 1.000
EC number :
EC 2.7.11.13
KEGG pathway :
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000008 : C2 domain
IPR002219 : Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
IPR020454 : Diacylglycerol/phorbol-ester binding
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 6, mito 3, cyto_nucl 3, cyto_pero 3,
cyto_plas 3, cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027463)
HIX0027463
HIT000498365
(
AK303741
)
(Protein kinase C gamma type; PKC-gamma; EC=2.7.11.13;)
genome : 54,386,913 - 54,410,226 (23,314)
query : 1 - 1,781 (1,781/1,781)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.13
KEGG pathway :
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000008 : C2 domain
IPR000961 : AGC-kinase, C-terminal
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR017892 : Protein kinase, C-terminal
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13.5, nucl 10, mito 3, plas 1.5,
E.R._mito 1.5, cysk_plas 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027463)
HIX0027463
HIT000641094 (
ENST00000542049
)
(Protein kinase C gamma type; PKC-gamma; EC=2.7.11.13;)
genome : 54,386,913 - 54,410,226 (23,314)
query : 1 - 1,781 (1,781/1,781)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.13
KEGG pathway :
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13.5, nucl 10, mito 3, plas 1.5,
E.R._mito 1.5, cysk_plas 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027463)
HIX0027463
HIT000326536
(
Z15114
)
(Protein kinase C gamma type; PKC-gamma; EC=2.7.11.13;)
genome : 54,393,224 - 54,410,366 (17,143)
query : 1 - 1,830 (1,830/1,830)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.13
KEGG pathway :
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000008 : C2 domain
IPR000961 : AGC-kinase, C-terminal
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR017892 : Protein kinase, C-terminal
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 10.5, cysk 9, nucl 4.5,
cysk_plas 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027463)
HIX0039988
HIT000475268 (
ENST00000391767
)
(Voltage-dependent calcium channel gamma-7 subunit; Neuronal voltage-gated calcium channel gamma-7 subunit; Transmembrane AMPAR regulatory protein gamma-7; TARP gamma-7;)
genome : 54,412,589 - 54,447,195 (34,607)
query : 1 - 2,688 (2,688/2,688)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 2, E.R. 2, golg 2, E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039988)
HIX0039988
HIT000572658 (
ENST00000468076
)
(Non-protein coding transcript.)
genome : 54,412,589 - 54,444,847 (32,259)
query : 1 - 448 (448/448)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039988)
HIX0039988
HIT000210261 (
NM_031896
)
(Voltage-dependent calcium channel gamma-7 subunit; Neuronal voltage-gated calcium channel gamma-7 subunit; Transmembrane AMPAR regulatory protein gamma-7; TARP gamma-7;)
genome : 54,415,991 - 54,446,969 (30,979)
query : 1 - 2,345 (2,345/2,345)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 2, E.R. 2, golg 2, E.R._golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039988)
HIX0039988
HIT000103636 (
ENST00000222212
)
(Voltage-dependent calcium channel gamma-7 subunit; Neuronal voltage-gated calcium channel gamma-7 subunit; Transmembrane AMPAR regulatory protein gamma-7; TARP gamma-7;)
genome : 54,415,991 - 54,445,640 (29,650)
query : 1 - 1,016 (1,016/1,016)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 2, E.R. 2, golg 2, E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039988)
HIX0039988
HIT000386956
(
BC113503
)
Representative transcript
(Voltage-dependent calcium channel gamma-7 subunit; Neuronal voltage-gated calcium channel gamma-7 subunit; Transmembrane AMPAR regulatory protein gamma-7; TARP gamma-7;)
genome : 54,415,991 - 54,445,640 (29,650)
query : 1 - 1,015 (1,015/1,015)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.994)3'
coverage = 1.000
InterPro :
IPR004031 : PMP-22/EMP/MP20/Claudin superfamily
IPR008368 : Voltage-dependent calcium channel, gamma subunit
IPR008371 : Voltage-dependent calcium channel, gamma-7 subunit
GO :
0006816 : Biological Process : calcium ion transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 2, E.R. 2, golg 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039988)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF361345
Mus
sp. (Mouse) : AK032173
Danio
sp. (Zebrafish) : BC128890
Monodelphis
sp. (Opossum) : ENSMODT00000017904
Oryzias
sp. (Medaka) : ENSORLT00000014403
Pongo
sp. (Orangutan) : ENSPPYT00000012054
Tetraodon
sp. (Tetraodon) : GSTENT00015421001
Tetraodon
sp. (Tetraodon) : GSTENT00033735001
Danio
sp. (Zebrafish) : NM_001083084
Takifugu
sp. (Fugu) : SINFRUT00000144732
Takifugu
sp. (Fugu) : SINFRUT00000154881
Macaca
sp. (Macaque) : XM_001116828
Pan
sp. (Chimpanzee) : XM_001174727
Danio
sp. (Zebrafish) : XM_001337836
Equus
sp. (Horse) : XM_001918146
Bos
sp. (Cow) : XM_590585
Canis
sp. (Dog) : XM_849184
HIX0039988
HIT000334844
(
BC093869
)
(Voltage-dependent calcium channel gamma-7 subunit; Neuronal voltage-gated calcium channel gamma-7 subunit; Transmembrane AMPAR regulatory protein gamma-7; TARP gamma-7;)
genome : 54,415,991 - 54,445,632 (29,642)
query : 1 - 1,007 (1,007/1,007)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR004031 : PMP-22/EMP/MP20/Claudin superfamily
IPR008368 : Voltage-dependent calcium channel, gamma subunit
IPR008371 : Voltage-dependent calcium channel, gamma-7 subunit
GO :
0006816 : Biological Process : calcium ion transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 2, E.R. 2, golg 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039988)
HIX0039988
HIT000263484
(
BC069332
)
(Voltage-dependent calcium channel gamma-7 subunit; Neuronal voltage-gated calcium channel gamma-7 subunit; Transmembrane AMPAR regulatory protein gamma-7; TARP gamma-7;)
genome : 54,416,071 - 54,445,597 (29,527)
query : 1 - 892 (892/892)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR004031 : PMP-22/EMP/MP20/Claudin superfamily
IPR008368 : Voltage-dependent calcium channel, gamma subunit
IPR008371 : Voltage-dependent calcium channel, gamma-7 subunit
GO :
0006816 : Biological Process : calcium ion transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 2, E.R. 2, golg 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039988)
HIX0039988
HIT000076342
(
AF288387
)
(Voltage-dependent calcium channel gamma-7 subunit; Neuronal voltage-gated calcium channel gamma-7 subunit; Transmembrane AMPAR regulatory protein gamma-7; TARP gamma-7;)
genome : 54,416,071 - 54,444,915 (28,845)
query : 1 - 631 (631/631)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004031 : PMP-22/EMP/MP20/Claudin superfamily
IPR008368 : Voltage-dependent calcium channel, gamma subunit
IPR008371 : Voltage-dependent calcium channel, gamma-7 subunit
GO :
0006816 : Biological Process : calcium ion transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, extr 6, E.R. 2, golg 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039988)
HIX0039988
HIT000475267 (
ENST00000391766
)
(Voltage-dependent calcium channel gamma-7 subunit; Neuronal voltage-gated calcium channel gamma-7 subunit; Transmembrane AMPAR regulatory protein gamma-7; TARP gamma-7;)
genome : 54,416,071 - 54,444,915 (28,845)
query : 1 - 631 (631/631)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, extr 6, E.R. 2, golg 2, E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039988)
HIX0039988
HIT000078381
(
AF361353
)
(Voltage-dependent calcium channel gamma-7 subunit; Neuronal voltage-gated calcium channel gamma-7 subunit; Transmembrane AMPAR regulatory protein gamma-7; TARP gamma-7;)
genome : 54,416,086 - 54,445,547 (29,462)
query : 1 - 828 (828/828)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004031 : PMP-22/EMP/MP20/Claudin superfamily
IPR008368 : Voltage-dependent calcium channel, gamma subunit
IPR008371 : Voltage-dependent calcium channel, gamma-7 subunit
GO :
0006816 : Biological Process : calcium ion transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 2, E.R. 2, golg 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039988)
HIX0039988
HIT000079989
(
AF458897
)
(Voltage-dependent calcium channel gamma-7 subunit; Neuronal voltage-gated calcium channel gamma-7 subunit; Transmembrane AMPAR regulatory protein gamma-7; TARP gamma-7;)
genome : 54,416,086 - 54,445,547 (29,462)
query : 1 - 828 (828/828)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004031 : PMP-22/EMP/MP20/Claudin superfamily
IPR008368 : Voltage-dependent calcium channel, gamma subunit
IPR008371 : Voltage-dependent calcium channel, gamma-7 subunit
GO :
0006816 : Biological Process : calcium ion transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 2, E.R. 2, golg 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039988)
HIX0039988
HIT000437659
(
DQ571128
)
(Non-protein coding transcript.)
genome : 54,418,714 - 54,418,743 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039988)
HIX0202898
HIT000078382
(
AF361354
)
Representative transcript
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 54,466,290 - 54,486,103 (19,814)
query : 3 - 1,386 (1,384/1,386)
4 exons
identity = 0.983
5'(0.957;1.000;1.000;0.991)3'
coverage = 0.999
InterPro :
IPR004031 : PMP-22/EMP/MP20/Claudin superfamily
IPR008368 : Voltage-dependent calcium channel, gamma subunit
IPR008372 : Voltage-dependent calcium channel, gamma-8 subunit
GO :
0006816 : Biological Process : calcium ion transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, mito 3, golg 2, E.R._mito 2, cyto_mito 2,
mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202898)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF361346
Danio
sp. (Zebrafish) : BC093221
Danio
sp. (Zebrafish) : ENSDART00000103894
Oryzias
sp. (Medaka) : ENSORLT00000007578
Pan
sp. (Chimpanzee) : ENSPTRT00000017531
Tetraodon
sp. (Tetraodon) : GSTENT00015422001
Tetraodon
sp. (Tetraodon) : GSTENT00033734001
Takifugu
sp. (Fugu) : SINFRUT00000154879
Takifugu
sp. (Fugu) : SINFRUT00000178881
Bos
sp. (Cow) : XM_870850
HIX0202898
HIT000210260 (
NM_031895
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 54,466,290 - 54,493,469 (27,180)
query : 1 - 8,751 (8,751/8,751)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202898)
HIX0202898
HIT000110571 (
ENST00000270458
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 54,466,294 - 54,493,469 (27,176)
query : 1 - 8,747 (8,747/8,747)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202898)
HIX0202898
HIT000074717
(
AF234892
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 54,466,378 - 54,485,437 (19,060)
query : 9 - 633 (625/633)
4 exons
identity = 0.986
5'(0.970;1.000;1.000;1.000)3'
coverage = 0.987
InterPro :
IPR004031 : PMP-22/EMP/MP20/Claudin superfamily
IPR008368 : Voltage-dependent calcium channel, gamma subunit
IPR008372 : Voltage-dependent calcium channel, gamma-8 subunit
GO :
0006816 : Biological Process : calcium ion transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202898)
HIX0202898
HIT000076343
(
AF288388
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 54,466,430 - 54,486,139 (19,710)
query : 1 - 1,281 (1,281/1,281)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004031 : PMP-22/EMP/MP20/Claudin superfamily
IPR008368 : Voltage-dependent calcium channel, gamma subunit
IPR008372 : Voltage-dependent calcium channel, gamma-8 subunit
GO :
0006816 : Biological Process : calcium ion transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202898)
HIX0202898
HIT000484043 (
ENST00000401179
)
(Non-protein coding transcript.)
genome : 54,485,561 - 54,485,651 (91)
query : 1 - 91 (91/91)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202898)
HIX0202898
HIT000658442 (
NR_030632
)
(Non-protein coding transcript.)
genome : 54,485,561 - 54,485,651 (91)
query : 1 - 91 (91/91)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202898)
HIX0202898
HIT000249575
(
AK131287
)
(Conserved hypothetical protein.)
genome : 54,490,741 - 54,493,468 (2,728)
query : 1 - 2,725 (2,725/2,725)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202898)
HIX0020312
HIT000011774
(
AK055160
)
Representative transcript
(Conserved hypothetical protein.)
genome : 54,491,368 - 54,493,468 (2,101)
query : 1 - 2,105 (2,105/2,105)
1 exon
identity = 0.992
3'(0.992)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, nucl 1, mito 1, lyso 1, golg 1, mito_nucl 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020312)
HIX0015427
HIT000727774 (
NR_102308
)
(Voltage-dependent calcium channel gamma-6 subunit; Neuronal voltage-gated calcium channel gamma-6 subunit;)
genome : 54,494,403 - 54,515,919 (21,517)
query : 1 - 839 (839/876)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 22, plas 5, nucl 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015427)
HIX0015427
HIT000039209
(
BC021552
)
Representative transcript
(Voltage-dependent calcium channel gamma-6 subunit; Neuronal voltage-gated calcium channel gamma-6 subunit;)
genome : 54,495,542 - 54,515,919 (20,378)
query : 1 - 1,849 (1,849/1,886)
4 exons
identity = 0.999
5'(0.999;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004031 : PMP-22/EMP/MP20/Claudin superfamily
IPR008368 : Voltage-dependent calcium channel, gamma subunit
IPR008370 : Voltage-dependent calcium channel, gamma-6 subunit
GO :
0006816 : Biological Process : calcium ion transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015427)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF361343
Mus
sp. (Mouse) : AF361348
Tetraodon
sp. (Tetraodon) : CR675654
Oryzias
sp. (Medaka) : ENSORLT00000007597
Pongo
sp. (Orangutan) : ENSPPYT00000012055
Takifugu
sp. (Fugu) : SINFRUT00000180143
Macaca
sp. (Macaque) : XM_001116077
Pan
sp. (Chimpanzee) : XM_001174737
Danio
sp. (Zebrafish) : XM_001342797
Monodelphis
sp. (Opossum) : XM_001378959
Equus
sp. (Horse) : XM_001917703
Canis
sp. (Dog) : XM_541431
Bos
sp. (Cow) : XM_599883
HIX0015427
HIT000210262 (
NM_031897
)
(Voltage-dependent calcium channel gamma-6 subunit; Neuronal voltage-gated calcium channel gamma-6 subunit;)
genome : 54,495,542 - 54,515,919 (20,378)
query : 1 - 1,636 (1,636/1,673)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015427)
HIX0015427
HIT000213332 (
NM_145814
)
(Voltage-dependent calcium channel gamma-6 subunit; Neuronal voltage-gated calcium channel gamma-6 subunit;)
genome : 54,495,542 - 54,515,919 (20,378)
query : 1 - 1,849 (1,849/1,886)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015427)
HIX0015427
HIT000213333 (
NM_145815
)
(Voltage-dependent calcium channel gamma-6 subunit; Neuronal voltage-gated calcium channel gamma-6 subunit;)
genome : 54,495,542 - 54,515,919 (20,378)
query : 1 - 1,711 (1,711/1,748)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015427)
HIX0015427
HIT000106356 (
ENST00000252729
)
(Voltage-dependent calcium channel gamma-6 subunit; Neuronal voltage-gated calcium channel gamma-6 subunit;)
genome : 54,495,542 - 54,515,923 (20,382)
query : 1 - 1,853 (1,853/1,853)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015427)
HIX0015427
HIT000308262 (
ENST00000352529
)
(Voltage-dependent calcium channel gamma-6 subunit; Neuronal voltage-gated calcium channel gamma-6 subunit;)
genome : 54,495,542 - 54,515,918 (20,377)
query : 1 - 1,635 (1,635/1,635)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015427)
HIX0015427
HIT000076341
(
AF288386
)
(Voltage-dependent calcium channel gamma-6 subunit; Neuronal voltage-gated calcium channel gamma-6 subunit;)
genome : 54,496,002 - 54,515,461 (19,460)
query : 1 - 931 (931/931)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004031 : PMP-22/EMP/MP20/Claudin superfamily
IPR008368 : Voltage-dependent calcium channel, gamma subunit
IPR008370 : Voltage-dependent calcium channel, gamma-6 subunit
GO :
0006816 : Biological Process : calcium ion transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015427)
HIX0015427
HIT000078380
(
AF361352
)
(Voltage-dependent calcium channel gamma-6 subunit; Neuronal voltage-gated calcium channel gamma-6 subunit;)
genome : 54,496,132 - 54,515,443 (19,312)
query : 1 - 783 (783/783)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004031 : PMP-22/EMP/MP20/Claudin superfamily
IPR008368 : Voltage-dependent calcium channel, gamma subunit
IPR008370 : Voltage-dependent calcium channel, gamma-6 subunit
GO :
0006816 : Biological Process : calcium ion transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015427)
HIX0015427
HIT000307383 (
ENST00000346968
)
(Voltage-dependent calcium channel gamma-6 subunit; Neuronal voltage-gated calcium channel gamma-6 subunit;)
genome : 54,496,132 - 54,515,443 (19,312)
query : 1 - 645 (645/645)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015427)
HIX0202932
HIT000319362 (
NM_198481
)
(V-set and transmembrane domain-containing protein 1; Precursor;)
genome : 54,544,081 - 54,567,207 (23,127)
query : 1 - 1,021 (1,021/1,034)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, pero 2.5, mito_pero 2.5, E.R. 2, mito 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000131002 (
ENST00000338372
)
(V-set and transmembrane domain-containing protein 1; Precursor;)
genome : 54,544,079 - 54,567,207 (23,129)
query : 1 - 1,023 (1,023/1,023)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, pero 2.5, mito_pero 2.5, E.R. 2, mito 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000685336 (
ENST00000572777
)
(V-set and transmembrane domain-containing protein 1; Precursor;)
genome : 54,544,079 - 54,567,207 (23,129)
query : 1 - 1,023 (1,023/1,023)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, pero 2.5, mito_pero 2.5, E.R. 2, mito 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000705283 (
ENST00000593470
)
(V-set and transmembrane domain-containing protein 1; Precursor;)
genome : 54,544,079 - 54,567,207 (23,129)
query : 1 - 1,023 (1,023/1,023)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, pero 2.5, mito_pero 2.5, E.R. 2, mito 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000707224 (
ENST00000595431
)
(V-set and transmembrane domain-containing protein 1; Precursor;)
genome : 54,544,079 - 54,567,207 (23,129)
query : 1 - 1,023 (1,023/1,023)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, pero 2.5, mito_pero 2.5, E.R. 2, mito 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000707598 (
ENST00000595807
)
(V-set and transmembrane domain-containing protein 1; Precursor;)
genome : 54,544,079 - 54,567,207 (23,129)
query : 1 - 1,023 (1,023/1,023)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, pero 2.5, mito_pero 2.5, E.R. 2, mito 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000709278 (
ENST00000597500
)
(V-set and transmembrane domain-containing protein 1; Precursor;)
genome : 54,544,079 - 54,567,207 (23,129)
query : 1 - 1,023 (1,023/1,023)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, pero 2.5, mito_pero 2.5, E.R. 2, mito 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000711662 (
ENST00000599912
)
(V-set and transmembrane domain-containing protein 1; Precursor;)
genome : 54,544,079 - 54,567,207 (23,129)
query : 1 - 1,023 (1,023/1,023)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, pero 2.5, mito_pero 2.5, E.R. 2, mito 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000712062 (
ENST00000600317
)
(V-set and transmembrane domain-containing protein 1; Precursor;)
genome : 54,544,079 - 54,567,207 (23,129)
query : 1 - 1,023 (1,023/1,023)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, pero 2.5, mito_pero 2.5, E.R. 2, mito 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000713795 (
ENST00000602062
)
(V-set and transmembrane domain-containing protein 1; Precursor;)
genome : 54,544,079 - 54,567,207 (23,129)
query : 1 - 1,023 (1,023/1,023)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, pero 2.5, mito_pero 2.5, E.R. 2, mito 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000517040 (
ENST00000419106
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,079 - 54,561,677 (17,599)
query : 1 - 517 (517/517)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.5, nucl 9.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000687421 (
ENST00000575191
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,079 - 54,561,677 (17,599)
query : 1 - 517 (517/517)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.5, nucl 9.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000705428 (
ENST00000593617
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,079 - 54,561,677 (17,599)
query : 1 - 517 (517/517)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.5, nucl 9.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000707653 (
ENST00000595862
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,079 - 54,561,677 (17,599)
query : 1 - 517 (517/517)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.5, nucl 9.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000710029 (
ENST00000598260
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,079 - 54,561,677 (17,599)
query : 1 - 517 (517/517)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.5, nucl 9.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000710227 (
ENST00000598461
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,079 - 54,561,677 (17,599)
query : 1 - 517 (517/517)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.5, nucl 9.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000710338 (
ENST00000598572
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,079 - 54,561,677 (17,599)
query : 1 - 517 (517/517)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.5, nucl 9.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000711669 (
ENST00000599919
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,079 - 54,561,677 (17,599)
query : 1 - 517 (517/517)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.5, nucl 9.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000712390 (
ENST00000600647
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,079 - 54,561,677 (17,599)
query : 1 - 517 (517/517)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.5, nucl 9.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000545806 (
ENST00000447872
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,083 - 54,567,207 (23,125)
query : 1 - 1,041 (1,041/1,041)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, pero 4, E.R. 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000686298 (
ENST00000573889
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,083 - 54,567,207 (23,125)
query : 1 - 1,041 (1,041/1,041)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, pero 4, E.R. 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000706013 (
ENST00000594206
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,083 - 54,567,207 (23,125)
query : 1 - 1,041 (1,041/1,041)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, pero 4, E.R. 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000706409 (
ENST00000594606
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,083 - 54,567,207 (23,125)
query : 1 - 1,041 (1,041/1,041)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, pero 4, E.R. 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000706481 (
ENST00000594680
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,083 - 54,567,207 (23,125)
query : 1 - 1,041 (1,041/1,041)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, pero 4, E.R. 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000709197 (
ENST00000597418
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,083 - 54,567,207 (23,125)
query : 1 - 1,041 (1,041/1,041)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, pero 4, E.R. 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000710375 (
ENST00000598610
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,083 - 54,567,207 (23,125)
query : 1 - 1,041 (1,041/1,041)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, pero 4, E.R. 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000710442 (
ENST00000598678
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,083 - 54,567,207 (23,125)
query : 1 - 1,041 (1,041/1,041)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, pero 4, E.R. 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000710631 (
ENST00000598868
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,083 - 54,567,207 (23,125)
query : 1 - 1,041 (1,041/1,041)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, pero 4, E.R. 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000252586
(
AY358542
)
(V-set and transmembrane domain-containing protein 1; Precursor;)
genome : 54,544,087 - 54,567,207 (23,121)
query : 10 - 1,024 (1,015/1,024)
9 exons
identity = 0.998
3'(1.000;1.000;0.974;1.000;0.989;1.000;1.000;
1.000;1.000)5'
coverage = 0.991
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, pero 2.5, mito_pero 2.5, E.R. 2, mito 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000357906 (
ENST00000376626
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,087 - 54,567,207 (23,121)
query : 1 - 922 (922/922)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 3, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000688264 (
ENST00000576174
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,087 - 54,567,207 (23,121)
query : 1 - 922 (922/922)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 3, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000708194 (
ENST00000596406
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,087 - 54,567,207 (23,121)
query : 1 - 922 (922/922)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 3, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000708667 (
ENST00000596884
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,087 - 54,567,207 (23,121)
query : 1 - 922 (922/922)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 3, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000709353 (
ENST00000597575
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,087 - 54,567,207 (23,121)
query : 1 - 922 (922/922)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 3, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000710482 (
ENST00000598718
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,087 - 54,567,207 (23,121)
query : 1 - 922 (922/922)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 3, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000711593 (
ENST00000599843
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,087 - 54,567,207 (23,121)
query : 1 - 922 (922/922)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 3, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000712904 (
ENST00000601164
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,087 - 54,567,207 (23,121)
query : 1 - 922 (922/922)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 3, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000713748 (
ENST00000602014
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,087 - 54,567,207 (23,121)
query : 1 - 922 (922/922)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 3, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000336355
(
BC100942
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,114 - 54,567,184 (23,071)
query : 1 - 1,260 (1,260/1,260)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, pero 4, E.R. 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000336356
(
BC100943
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,114 - 54,567,184 (23,071)
query : 1 - 872 (872/872)
8 exons
identity = 0.997
3'(0.995;1.000;1.000;1.000;1.000;0.996;1.000;
0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 3, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000646874
(
FN398145
)
Representative transcript
(V-set and transmembrane domain-containing protein 1; Precursor;)
genome : 54,544,158 - 54,567,035 (22,878)
query : 1 - 772 (772/772)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.996;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, pero 2.5, mito_pero 2.5, E.R. 2, mito 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : BC149691
Canis
sp. (Dog) : ENSCAFT00000037412
Equus
sp. (Horse) : ENSECAT00000016445
Pongo
sp. (Orangutan) : ENSPPYT00000012056
Rattus
sp. (Rat) : ENSRNOT00000059239
Pan
sp. (Chimpanzee) : XM_001174748
Gallus
sp. (Chicken) : XM_001236538
Monodelphis
sp. (Opossum) : XM_001377306
Mus
sp. (Mouse) : XM_001475796
HIX0202932
HIT000503674
(
DQ479397
)
(V-set and transmembrane domain-containing protein 1; Precursor;)
genome : 54,544,201 - 54,567,048 (22,848)
query : 1 - 742 (742/742)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.989;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, pero 2.5, mito_pero 2.5, E.R. 2, mito 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000347450 (
ENST00000366170
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,204 - 54,567,042 (22,839)
query : 1 - 524 (524/524)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 20, nucl 6, plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000522940 (
ENST00000425006
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,204 - 54,567,042 (22,839)
query : 1 - 822 (822/822)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000646023
(
FJ584316
)
(V-set and transmembrane domain-containing protein 1; Precursor;)
genome : 54,544,204 - 54,567,042 (22,839)
query : 1 - 733 (733/733)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.989;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, pero 2.5, mito_pero 2.5, E.R. 2, mito 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000646024
(
FJ584317
)
(V-set and transmembrane domain-containing protein 1; Precursor;)
genome : 54,544,204 - 54,567,042 (22,839)
query : 1 - 733 (733/733)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, pero 2.5, mito_pero 2.5, E.R. 2, mito 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000646025
(
FJ584318
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,204 - 54,567,042 (22,839)
query : 1 - 640 (640/640)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 3, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000646026
(
FJ584319
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,204 - 54,567,042 (22,839)
query : 1 - 373 (373/373)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000646027
(
FJ584320
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,204 - 54,567,042 (22,839)
query : 1 - 524 (524/524)
9 exons
identity = 0.990
3'(1.000;1.000;0.947;1.000;0.989;0.974;0.987;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 17, plas 6, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000646825
(
FJ882051
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,204 - 54,567,042 (22,839)
query : 1 - 822 (822/822)
10 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;0.989;1.000;
0.996;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000683427 (
ENST00000570556
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,204 - 54,567,042 (22,839)
query : 1 - 524 (524/524)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 20, nucl 6, plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000688575 (
ENST00000576527
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,204 - 54,567,042 (22,839)
query : 1 - 822 (822/822)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000705284 (
ENST00000593471
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,204 - 54,567,042 (22,839)
query : 1 - 524 (524/524)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 20, nucl 6, plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000706107 (
ENST00000594301
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,204 - 54,567,042 (22,839)
query : 1 - 822 (822/822)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000706139 (
ENST00000594333
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,204 - 54,567,042 (22,839)
query : 1 - 822 (822/822)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000706213 (
ENST00000594407
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,204 - 54,567,042 (22,839)
query : 1 - 524 (524/524)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 20, nucl 6, plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000706435 (
ENST00000594634
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,204 - 54,567,042 (22,839)
query : 1 - 822 (822/822)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000707490 (
ENST00000595699
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,204 - 54,567,042 (22,839)
query : 1 - 524 (524/524)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 20, nucl 6, plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000707500 (
ENST00000595709
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,204 - 54,567,042 (22,839)
query : 1 - 524 (524/524)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 20, nucl 6, plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000710095 (
ENST00000598326
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,204 - 54,567,042 (22,839)
query : 1 - 822 (822/822)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000711448 (
ENST00000599696
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,204 - 54,567,042 (22,839)
query : 1 - 524 (524/524)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 20, nucl 6, plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000711578 (
ENST00000599828
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,204 - 54,567,042 (22,839)
query : 1 - 822 (822/822)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000711903 (
ENST00000600156
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,204 - 54,567,042 (22,839)
query : 1 - 524 (524/524)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 20, nucl 6, plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000712341 (
ENST00000600598
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,204 - 54,567,042 (22,839)
query : 1 - 822 (822/822)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000712853 (
ENST00000601112
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,204 - 54,567,042 (22,839)
query : 1 - 524 (524/524)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 20, nucl 6, plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202932
HIT000712968 (
ENST00000601228
)
(V-set and transmembrane domain-containing protein 1 precursor.)
genome : 54,544,204 - 54,567,042 (22,839)
query : 1 - 822 (822/822)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202932)
HIX0202947
HIT000496354
(
AK301730
)
(T-cell-interacting, activating receptor on myeloid cells protein 1 precursor.)
genome : 54,573,149 - 54,579,813 (6,665)
query : 1 - 1,234 (1,234/1,234)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 8.5, cyto_nucl 8.33333, cyto 7,
cyto_mito 5.83333, plas 4, pero 4, mito 3.5, extr 2, E.R. 2, cysk_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202947)
HIX0202947
HIT000543968 (
ENST00000446034
)
(T-cell-interacting, activating receptor on myeloid cells protein 1 precursor.)
genome : 54,573,149 - 54,579,813 (6,665)
query : 1 - 1,234 (1,234/1,234)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 8.5, cyto_nucl 8.33333, cyto 7,
cyto_mito 5.83333, plas 4, pero 4, mito 3.5, extr 2, E.R. 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202947)
HIX0202947
HIT000687717 (
ENST00000575525
)
(T-cell-interacting, activating receptor on myeloid cells protein 1 precursor.)
genome : 54,573,149 - 54,579,813 (6,665)
query : 1 - 1,234 (1,234/1,234)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 8.5, cyto_nucl 8.33333, cyto 7,
cyto_mito 5.83333, plas 4, pero 4, mito 3.5, extr 2, E.R. 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202947)
HIX0202947
HIT000705765 (
ENST00000593955
)
(T-cell-interacting, activating receptor on myeloid cells protein 1 precursor.)
genome : 54,573,149 - 54,579,813 (6,665)
query : 1 - 1,234 (1,234/1,234)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 8.5, cyto_nucl 8.33333, cyto 7,
cyto_mito 5.83333, plas 4, pero 4, mito 3.5, extr 2, E.R. 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202947)
HIX0202947
HIT000706346 (
ENST00000594543
)
(T-cell-interacting, activating receptor on myeloid cells protein 1 precursor.)
genome : 54,573,149 - 54,579,813 (6,665)
query : 1 - 1,234 (1,234/1,234)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 8.5, cyto_nucl 8.33333, cyto 7,
cyto_mito 5.83333, plas 4, pero 4, mito 3.5, extr 2, E.R. 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202947)
HIX0202947
HIT000708246 (
ENST00000596458
)
(T-cell-interacting, activating receptor on myeloid cells protein 1 precursor.)
genome : 54,573,149 - 54,579,813 (6,665)
query : 1 - 1,234 (1,234/1,234)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 8.5, cyto_nucl 8.33333, cyto 7,
cyto_mito 5.83333, plas 4, pero 4, mito 3.5, extr 2, E.R. 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202947)
HIX0202947
HIT000710072 (
ENST00000598303
)
(T-cell-interacting, activating receptor on myeloid cells protein 1 precursor.)
genome : 54,573,149 - 54,579,813 (6,665)
query : 1 - 1,234 (1,234/1,234)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 8.5, cyto_nucl 8.33333, cyto 7,
cyto_mito 5.83333, plas 4, pero 4, mito 3.5, extr 2, E.R. 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202947)
HIX0202947
HIT000711310 (
ENST00000599556
)
(T-cell-interacting, activating receptor on myeloid cells protein 1 precursor.)
genome : 54,573,149 - 54,579,813 (6,665)
query : 1 - 1,234 (1,234/1,234)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 8.5, cyto_nucl 8.33333, cyto 7,
cyto_mito 5.83333, plas 4, pero 4, mito 3.5, extr 2, E.R. 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202947)
HIX0202947
HIT000711493 (
ENST00000599741
)
(T-cell-interacting, activating receptor on myeloid cells protein 1 precursor.)
genome : 54,573,149 - 54,579,813 (6,665)
query : 1 - 1,234 (1,234/1,234)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 8.5, cyto_nucl 8.33333, cyto 7,
cyto_mito 5.83333, plas 4, pero 4, mito 3.5, extr 2, E.R. 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202947)
HIX0202947
HIT000713336 (
ENST00000601599
)
(T-cell-interacting, activating receptor on myeloid cells protein 1 precursor.)
genome : 54,573,149 - 54,579,813 (6,665)
query : 1 - 1,234 (1,234/1,234)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 8.5, cyto_nucl 8.33333, cyto 7,
cyto_mito 5.83333, plas 4, pero 4, mito 3.5, extr 2, E.R. 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202947)
HIX0202947
HIT000503675
(
DQ479398
)
Representative transcript
(T-cell-interacting, activating receptor on myeloid cells protein 1 precursor.)
genome : 54,573,201 - 54,584,634 (11,434)
query : 1 - 897 (897/897)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, pero 9, extr_plas 9, plas 4, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202947)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK155804
Monodelphis
sp. (Opossum) : ENSMODT00000007135
Monodelphis
sp. (Opossum) : XM_001374369
Equus
sp. (Horse) : XM_001917707
Pan
sp. (Chimpanzee) : XM_524390
Canis
sp. (Dog) : XM_541430
Rattus
sp. (Rat) : XM_574346
Bos
sp. (Cow) : XM_586567
HIX0202947
HIT000530760 (
ENST00000432826
)
(T-cell-interacting, activating receptor on myeloid cells protein 1 precursor.)
genome : 54,573,201 - 54,584,634 (11,434)
query : 1 - 897 (897/897)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, pero 9, extr_plas 9, plas 4, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202947)
HIX0202947
HIT000560158 (
NM_001135686
)
(T-cell-interacting, activating receptor on myeloid cells protein 1 precursor.)
genome : 54,573,201 - 54,584,634 (11,434)
query : 1 - 897 (897/897)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, pero 9, extr_plas 9, plas 4, lyso 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202947)
HIX0202947
HIT000686943 (
ENST00000574636
)
(T-cell-interacting, activating receptor on myeloid cells protein 1 precursor.)
genome : 54,573,201 - 54,584,634 (11,434)
query : 1 - 897 (897/897)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, pero 9, extr_plas 9, plas 4, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202947)
HIX0202947
HIT000707781 (
ENST00000595990
)
(T-cell-interacting, activating receptor on myeloid cells protein 1 precursor.)
genome : 54,573,201 - 54,584,634 (11,434)
query : 1 - 897 (897/897)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, pero 9, extr_plas 9, plas 4, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202947)
HIX0202947
HIT000708364 (
ENST00000596576
)
(T-cell-interacting, activating receptor on myeloid cells protein 1 precursor.)
genome : 54,573,201 - 54,584,634 (11,434)
query : 1 - 897 (897/897)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, pero 9, extr_plas 9, plas 4, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202947)
HIX0202947
HIT000709143 (
ENST00000597364
)
(T-cell-interacting, activating receptor on myeloid cells protein 1 precursor.)
genome : 54,573,201 - 54,584,634 (11,434)
query : 1 - 897 (897/897)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, pero 9, extr_plas 9, plas 4, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202947)
HIX0202947
HIT000711237 (
ENST00000599482
)
(T-cell-interacting, activating receptor on myeloid cells protein 1 precursor.)
genome : 54,573,201 - 54,584,634 (11,434)
query : 1 - 897 (897/897)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, pero 9, extr_plas 9, plas 4, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202947)
HIX0202947
HIT000711893 (
ENST00000600146
)
(T-cell-interacting, activating receptor on myeloid cells protein 1 precursor.)
genome : 54,573,201 - 54,584,634 (11,434)
query : 1 - 897 (897/897)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, pero 9, extr_plas 9, plas 4, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202947)
HIX0202947
HIT000712779 (
ENST00000601037
)
(T-cell-interacting, activating receptor on myeloid cells protein 1 precursor.)
genome : 54,573,201 - 54,584,634 (11,434)
query : 1 - 897 (897/897)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, pero 9, extr_plas 9, plas 4, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202947)
HIX0202947
HIT000713331 (
ENST00000601594
)
(T-cell-interacting, activating receptor on myeloid cells protein 1 precursor.)
genome : 54,573,201 - 54,584,634 (11,434)
query : 1 - 897 (897/897)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, pero 9, extr_plas 9, plas 4, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202947)
HIX0015428
HIT000075078
(
AF251702
)
(Osteoclast-associated immunoglobulin-like receptor isoform 3 precursor.)
genome : 54,597,935 - 54,604,129 (6,195)
query : 1 - 1,389 (1,389/1,426)
5 exons
identity = 0.997
3'(0.997;0.996;0.997;1.000;1.000)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, plas 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015428)
HIX0015428
HIT000212061 (
NM_130771
)
(Osteoclast-associated immunoglobulin-like receptor isoform 3 precursor.)
genome : 54,597,934 - 54,604,148 (6,215)
query : 1 - 1,421 (1,421/1,432)
5 exons
identity = 0.993
3'(1.000;1.000;0.972;0.966;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 19, extr 10
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015428)
HIX0015428
HIT000212129 (
NM_133169
)
(Osteoclast-associated immunoglobulin-like receptor isoform 4 precursor.)
genome : 54,597,934 - 54,604,148 (6,215)
query : 1 - 1,409 (1,409/1,420)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, extr 14
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015428)
HIX0015428
HIT000320145 (
NM_206818
)
(Osteoclast-associated immunoglobulin-like receptor; Osteoclast-associated receptor; hOSCAR; Polymeric immunoglobulin receptor 3; PIgR-3; PIgR3; Poly-Ig receptor 3; Precursor;)
genome : 54,597,934 - 54,604,148 (6,215)
query : 1 - 1,935 (1,935/1,946)
4 exons
identity = 0.995
3'(1.000;0.972;0.966;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015428)
HIX0015428
HIT000078839
(
AF391162
)
Representative transcript
(Osteoclast-associated immunoglobulin-like receptor isoform 4 precursor.)
genome : 54,597,934 - 54,604,090 (6,157)
query : 1 - 1,351 (1,351/1,362)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, extr 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015428)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF391161
Pongo
sp. (Orangutan) : ENSPPYT00000012057
Rattus
sp. (Rat) : ENSRNOT00000037943
Macaca
sp. (Macaque) : XM_001083251
Pan
sp. (Chimpanzee) : XM_001163782
Monodelphis
sp. (Opossum) : XM_001377004
Equus
sp. (Horse) : XM_001917707
Canis
sp. (Dog) : XM_541429
&n