bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0023934
HIT000052338
(
BC040176
)
genome : 149,894,981 - 150,071,772 (176,792)
query : 1 - 1,573 (1,573/1,600)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023934)
HIX0023934
HIT000215516 (
NM_177964
)
genome : 149,894,981 - 150,071,772 (176,792)
query : 1 - 1,573 (1,573/1,600)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.999
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023934)
HIX0023934
HIT000507671 (
ENST00000409642
)
genome : 149,894,981 - 150,071,776 (176,796)
query : 1 - 1,577 (1,577/1,577)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023934)
HIX0023934
HIT000050701
(
BC018203
)
genome : 149,895,232 - 150,071,769 (176,538)
query : 1 - 1,246 (1,246/1,314)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023934)
HIX0023934
HIT000507900 (
ENST00000409876
)
genome : 149,895,232 - 150,071,770 (176,539)
query : 1 - 1,248 (1,248/1,248)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023934)
HIX0023934
HIT000079635
(
AF435957
)
genome : 149,934,036 - 150,071,776 (137,741)
query : 1 - 1,306 (1,306/1,309)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;0.999)3'
coverage = 0.998
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023934)
HIX0023934
HIT000507065 (
ENST00000409029
)
genome : 149,934,036 - 150,071,776 (137,741)
query : 1 - 1,306 (1,306/1,306)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023934)
HIX0023934
HIT000578282 (
ENST00000473975
)
genome : 149,974,688 - 150,061,836 (87,149)
query : 1 - 572 (572/572)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023934)
HIX0023934
HIT000535561 (
ENST00000437627
)
genome : 149,974,695 - 150,057,222 (82,528)
query : 1 - 528 (528/528)
6 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023934)
HIX0023934
HIT000548573 (
ENST00000450639
)
genome : 149,974,710 - 150,044,149 (69,440)
query : 1 - 484 (484/484)
5 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023934)
HIX0023934
HIT000540656 (
ENST00000442722
)
genome : 149,975,617 - 150,064,881 (89,265)
query : 1 - 515 (515/515)
5 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023934)
HIX0023934
HIT000601477 (
ENST00000498249
)
genome : 149,998,550 - 150,071,776 (73,227)
query : 1 - 1,719 (1,719/1,719)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023934)
HIX0023934
HIT000111918 (
ENST00000280115
)
genome : 150,017,276 - 150,071,772 (54,497)
query : 4 - 1,172 (1,169/1,172)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.997
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023934)
HIX0162545
HIT000525152 (
ENST00000427218
)
genome : 150,177,107 - 150,177,950 (844)
query : 1 - 844 (844/844)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162545)
HIX0002498
HIT000656109 (
NM_001195685
)
genome : 150,186,499 - 150,330,658 (144,160)
query : 1 - 4,099 (4,099/4,111)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002498)
HIX0002498
HIT000044606
(
AK124733
)
genome : 150,186,499 - 150,330,137 (143,639)
query : 1 - 3,578 (3,578/3,578)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;0.992;0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002498)
HIX0002498
HIT000507413 (
ENST00000409381
)
genome : 150,186,499 - 150,330,137 (143,639)
query : 1 - 3,578 (3,578/3,578)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002498)
HIX0002498
HIT000319054 (
NM_194317
)
genome : 150,187,029 - 150,330,658 (143,630)
query : 1 - 4,089 (4,089/4,101)
5 exons
identity = 0.998
5'(0.995;1.000;1.000;1.000;0.998)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002498)
HIX0002498
HIT000128795 (
ENST00000334166
)
genome : 150,187,051 - 150,330,662 (143,612)
query : 1 - 4,071 (4,071/4,071)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002498)
HIX0002498
HIT000252667
(
AY358623
)
genome : 150,187,113 - 150,330,138 (143,026)
query : 1 - 3,485 (3,485/3,501)
5 exons
identity = 0.998
5'(0.992;1.000;1.000;1.000;0.998)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002498)
HIX0002498
HIT000428114
(
AK309248
)
genome : 150,187,177 - 150,327,609 (140,433)
query : 1 - 1,204 (1,204/1,204)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002498)
HIX0002498
HIT000516696 (
ENST00000418762
)
genome : 150,187,177 - 150,327,609 (140,433)
query : 1 - 1,204 (1,204/1,204)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002498)
HIX0002498
HIT000512354 (
ENST00000414420
)
genome : 150,224,215 - 150,305,604 (81,390)
query : 1 - 565 (565/565)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002498)
HIX0002498
HIT000092831
(
BC032836
)
genome : 150,224,226 - 150,327,620 (103,395)
query : 8 - 1,583 (1,576/1,598)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.996
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002498)
HIX0002498
HIT000476325 (
ENST00000392854
)
genome : 150,224,226 - 150,327,624 (103,399)
query : 1 - 1,580 (1,580/1,580)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002498)
HIX0002498
HIT000053063
(
BC047013
)
genome : 150,224,530 - 150,327,535 (103,006)
query : 1 - 996 (996/1,090)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002498)
HIX0162428
HIT000519875 (
ENST00000421941
)
genome : 150,296,411 - 150,296,941 (531)
query : 1 - 531 (531/531)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162428)
HIX0002498
HIT000026764
(
AL831852
)
genome : 150,325,219 - 150,330,646 (5,428)
query : 1 - 3,517 (3,517/3,527)
2 exons
identity = 0.996
5'(1.000;0.996)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002498)
HIX0117673
HIT000012313
(
AK055699
)
genome : 150,328,191 - 150,330,137 (1,947)
query : 1 - 1,947 (1,947/1,947)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117673)
HIX0002497
HIT000205626 (
NM_015702
)
genome : 150,426,147 - 150,444,330 (18,184)
query : 1 - 1,437 (1,437/1,466)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002497)
HIX0002497
HIT000002111
(
AF161510
)
genome : 150,426,152 - 150,444,277 (18,126)
query : 7 - 1,384 (1,378/1,416)
8 exons
identity = 0.997
3'(0.996;1.000;1.000;0.991;1.000;1.000;1.000;
0.990)5'
coverage = 0.996
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002497)
HIX0002497
HIT000039660
(
BC022859
)
genome : 150,426,153 - 150,444,273 (18,121)
query : 4 - 1,377 (1,374/1,406)
8 exons
identity = 0.998
3'(0.996;1.000;1.000;0.991;1.000;1.000;1.000;
1.000)5'
coverage = 0.996
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002497)
HIX0002497
HIT000035099
(
BC010894
)
genome : 150,426,155 - 150,444,249 (18,095)
query : 5 - 1,352 (1,348/1,383)
8 exons
identity = 0.998
3'(0.996;1.000;1.000;0.991;1.000;1.000;1.000;
1.000)5'
coverage = 0.996
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002497)
HIX0002497
HIT000070807
(
AF131802
)
genome : 150,426,149 - 150,444,220 (18,072)
query : 1 - 1,325 (1,325/1,350)
8 exons
identity = 0.998
3'(0.996;1.000;1.000;0.991;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002497)
HIX0002497
HIT000039712
(
BC023995
)
genome : 150,426,152 - 150,444,240 (18,089)
query : 5 - 1,346 (1,342/1,372)
8 exons
identity = 0.998
3'(0.996;1.000;1.000;0.991;1.000;1.000;1.000;
1.000)5'
coverage = 0.997
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002497)
HIX0002497
HIT000030012
(
BC000932
)
genome : 150,426,152 - 150,444,279 (18,128)
query : 1 - 1,381 (1,381/1,401)
8 exons
identity = 0.998
3'(0.996;1.000;1.000;0.991;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002497)
HIX0002497
HIT000116410 (
ENST00000303319
)
genome : 150,426,148 - 150,444,330 (18,183)
query : 1 - 1,436 (1,436/1,436)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002497)
HIX0002497
HIT000064893
(
AF060224
)
genome : 150,426,153 - 150,443,643 (17,491)
query : 1 - 1,261 (1,261/1,261)
7 exons
identity = 0.989
3'(0.992;0.954;0.963;0.991;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002497)
HIX0002497
HIT000526813 (
ENST00000428879
)
genome : 150,426,158 - 150,444,116 (17,959)
query : 1 - 1,726 (1,726/1,726)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002497)
HIX0002497
HIT000520716 (
ENST00000422782
)
genome : 150,426,186 - 150,444,292 (18,107)
query : 1 - 1,462 (1,462/1,462)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002497)
HIX0002497
HIT000428867
(
AK310001
)
genome : 150,426,379 - 150,444,265 (17,887)
query : 1 - 1,007 (1,007/1,007)
8 exons
identity = 0.994
3'(0.993;0.989;1.000;0.976;0.987;1.000;1.000;
1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002497)
HIX0002497
HIT000432150
(
AK313284
)
genome : 150,426,488 - 150,444,229 (17,742)
query : 1 - 995 (995/995)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;0.991;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002497)
HIX0002497
HIT000565242 (
ENST00000460311
)
genome : 150,443,403 - 150,444,240 (838)
query : 1 - 324 (324/324)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002497)
HIX0180486
HIT000547648 (
ENST00000449714
)
genome : 150,443,710 - 150,704,747 (261,038)
query : 1 - 1,022 (1,022/1,022)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0180486)
HIX0203978
eHIT000014201 ( ESTsASS_2_302 )
genome : 150,444,860 - 150,450,633 (5,774)
query : 1 - 670 (670/670)
3 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203978)
ESTs used for assembly :
AA412290,CR737805
HIX0002496
HIT000014131
(
AK057517
)
genome : 150,624,020 - 150,715,705 (91,686)
query : 1 - 1,832 (1,832/1,832)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002496)
HIX0002496
HIT000114043 (
ENST00000295052
)
genome : 150,624,020 - 150,715,705 (91,686)
query : 1 - 1,832 (1,832/1,832)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002496)
HIX0002496
HIT000531108 (
ENST00000433174
)
genome : 150,672,978 - 150,714,199 (41,222)
query : 1 - 556 (556/556)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002496)
HIX0162785
HIT000535052 (
ENST00000437118
)
genome : 151,027,937 - 151,157,594 (129,658)
query : 1 - 368 (368/368)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162785)
HIX0162588
HIT000527251 (
ENST00000429317
)
genome : 151,091,406 - 151,113,521 (22,116)
query : 1 - 564 (564/564)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162588)
HIX0002500
HIT000035848
(
BC012513
)
genome : 151,324,711 - 151,344,164 (19,454)
query : 1 - 2,668 (2,668/2,685)
6 exons
identity = 0.997
3'(0.998;1.000;0.965;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002500)
HIX0002500
HIT000723432 (
NM_001254738
)
genome : 151,324,707 - 151,344,209 (19,503)
query : 1 - 2,807 (2,807/2,807)
5 exons
identity = 0.999
3'(1.000;1.000;0.965;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002500)
HIX0002500
HIT000201879 (
NM_005168
)
genome : 151,324,709 - 151,344,209 (19,501)
query : 1 - 2,712 (2,712/2,712)
6 exons
identity = 0.999
3'(1.000;1.000;0.965;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002500)
HIX0002500
HIT000109090 (
ENST00000263895
)
genome : 151,324,709 - 151,344,208 (19,500)
query : 1 - 2,711 (2,711/2,711)
6 exons
identity = 0.999
3'(1.000;1.000;0.965;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002500)
HIX0002500
HIT000357014 (
ENST00000375734
)
genome : 151,324,709 - 151,344,181 (19,473)
query : 1 - 2,777 (2,777/2,777)
5 exons
identity = 0.999
3'(1.000;1.000;0.965;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002500)
HIX0002500
HIT000325015
(
X97758
)
genome : 151,324,721 - 151,344,153 (19,433)
query : 1 - 2,745 (2,745/2,745)
5 exons
identity = 0.992
3'(0.993;1.000;0.965;1.000;0.987)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002500)
HIX0002500
HIT000507588 (
ENST00000409557
)
genome : 151,324,723 - 151,341,896 (17,174)
query : 1 - 2,372 (2,372/2,372)
4 exons
identity = 0.998
3'(1.000;1.000;0.965;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002500)
HIX0002500
HIT000492631
(
AK298007
)
genome : 151,325,757 - 151,344,179 (18,423)
query : 1 - 1,285 (1,285/1,285)
5 exons
identity = 0.996
3'(0.996;0.987;0.989;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002500)
HIX0002500
HIT000430178
(
AK311312
)
genome : 151,325,846 - 151,344,179 (18,334)
query : 1 - 1,143 (1,143/1,143)
2 exons
identity = 0.997
3'(0.999;0.989)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002500)
HIX0002500
HIT000428308
(
AK309442
)
genome : 151,326,206 - 151,341,896 (15,691)
query : 1 - 889 (889/889)
4 exons
identity = 0.996
3'(1.000;1.000;0.965;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002500)
HIX0002500
HIT000601115 (
ENST00000497865
)
genome : 151,326,291 - 151,343,380 (17,090)
query : 1 - 880 (880/880)
4 exons
identity = 0.995
3'(1.000;1.000;0.965;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002500)
HIX0002500
HIT000494355
(
AK299731
)
genome : 151,326,304 - 151,343,614 (17,311)
query : 1 - 893 (893/893)
5 exons
identity = 0.992
3'(1.000;0.978;0.965;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002500)
HIX0002500
HIT000217153
(
S82240
)
genome : 151,326,381 - 151,343,910 (17,530)
query : 1 - 833 (833/833)
5 exons
identity = 0.994
3'(0.997;1.000;0.965;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002500)
HIX0002500
HIT000432090
(
AK313224
)
genome : 151,326,501 - 151,344,182 (17,682)
query : 1 - 987 (987/987)
5 exons
identity = 0.994
3'(0.996;1.000;0.965;1.000;0.998)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002500)
HIX0002500
HIT000080906
(
AF498969
)
genome : 151,326,501 - 151,343,931 (17,431)
query : 1 - 735 (735/735)
5 exons
identity = 0.995
3'(1.000;1.000;0.965;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002500)
HIX0002500
HIT000099689
(
BT006769
)
genome : 151,326,503 - 151,343,931 (17,429)
query : 1 - 733 (733/735)
5 exons
identity = 0.995
3'(1.000;1.000;0.965;1.000;1.000)5'
coverage = 0.997
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002500)
HIX0002500
HIT000324899
(
X95282
)
genome : 151,326,501 - 151,343,931 (17,431)
query : 1 - 735 (735/735)
5 exons
identity = 0.995
3'(1.000;1.000;0.965;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002500)
HIX0002500
HIT000268907
(
CR542038
)
genome : 151,326,501 - 151,343,886 (17,386)
query : 1 - 690 (690/690)
5 exons
identity = 0.993
3'(1.000;0.993;0.965;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002500)
HIX0002500
HIT000268939
(
CR542070
)
genome : 151,326,504 - 151,343,886 (17,383)
query : 1 - 687 (687/687)
5 exons
identity = 0.994
3'(1.000;1.000;0.965;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002500)
HIX0002500
HIT000577961 (
ENST00000473639
)
genome : 151,326,655 - 151,328,474 (1,820)
query : 1 - 432 (432/432)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002500)
HIX0002500
HIT000570992 (
ENST00000466334
)
genome : 151,328,140 - 151,331,618 (3,479)
query : 1 - 366 (366/385)
2 exons
identity = 0.989
3'(1.000;0.983)5'
coverage = 0.951
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002500)
HIX0002500
HIT000576792 (
ENST00000472416
)
genome : 151,328,152 - 151,343,614 (15,463)
query : 1 - 457 (457/457)
4 exons
identity = 0.991
3'(1.000;0.965;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002500)
HIX0002500
HIT000537209 (
ENST00000439275
)
genome : 151,331,389 - 151,395,525 (64,137)
query : 1 - 505 (505/505)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002500)
HIX0002500
HIT000552136 (
ENST00000454202
)
genome : 151,331,389 - 151,344,243 (12,855)
query : 1 - 481 (481/481)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002500)
HIX0030213
HIT000088518
(
BC014936
)
genome : 151,409,046 - 151,428,735 (19,690)
query : 1 - 2,528 (2,528/2,560)
6 exons
identity = 1.000
3'(1.000;0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030213)
HIX0030213
HIT000539290 (
ENST00000441356
)
genome : 151,409,046 - 151,428,735 (19,690)
query : 1 - 2,528 (2,528/2,528)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030213)
HIX0162300
HIT000514284 (
ENST00000416350
)
genome : 151,422,648 - 151,424,594 (1,947)
query : 1 - 545 (545/545)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162300)
HIX0162424
HIT000519558 (
ENST00000421624
)
genome : 151,451,616 - 151,476,581 (24,966)
query : 1 - 568 (568/568)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162424)
HIX0161708
HIT000538602 (
ENST00000440668
)
genome : 151,468,895 - 151,491,630 (22,736)
query : 1 - 739 (739/739)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161708)
HIX0161708
HIT000511181 (
ENST00000413247
)
genome : 151,485,411 - 151,491,862 (6,452)
query : 1 - 774 (774/774)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161708)
HIX0161708
HIT000521362 (
ENST00000423428
)
genome : 151,485,506 - 151,491,484 (5,979)
query : 1 - 554 (554/554)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161708)
HIX0161708
HIT000525549 (
ENST00000427615
)
genome : 151,485,569 - 151,491,854 (6,286)
query : 1 - 531 (531/531)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161708)
HIX0161708
HIT000541745 (
ENST00000443811
)
genome : 151,485,581 - 151,491,382 (5,802)
query : 1 - 418 (418/418)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161708)
HIX0203978
eHIT000014201 ( ESTsASS_2_302 )
genome : 150,444,860 - 150,450,633 (5,774)
query : 1 - 670 (670/670)
3 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203978)
ESTs used for assembly :
AA412290,CR737805
AC009230.3
150000001-150168556 F +
NCBI
AC079978.7
150168557-150172194 F -
NCBI
AC007394.4
150172195-150343462 F -
NCBI
AC073625.5
150343463-150374730 F -
NCBI
AC093170.3
150374731-150385855 F -
NCBI
AC110782.2
150385856-150457651 F -
NCBI
AC007364.3
150457652-150656559 F -
NCBI
AC073461.6
150656560-150670884 F -
NCBI
AC145169.1
150670885-150700714 F +
NCBI
AC144449.2
150700715-150713315 F +
NCBI
AC012492.9
150713316-150894901 F -
NCBI
AC016682.5
150894902-151069394 F -
NCBI
AC113610.4
151069395-151156749 F -
NCBI
AC093738.2
151156750-151329640 F +
NCBI
AC074097.6
151329641-151417497 F +
NCBI
AC104777.7
151417498-151526392 F +
NCBI
AC068551.6
151526393-151600000 F +
NCBI