bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0029920
HIT000537950 (
ENST00000440016
)
(Conserved hypothetical protein.)
genome : 176,986,339 - 177,001,741 (15,403)
query : 1 - 999 (999/999)
4 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029920)
HIX0029920
HIT000524899 (
ENST00000426965
)
(Conserved hypothetical protein.)
genome : 176,999,334 - 177,001,826 (2,493)
query : 1 - 927 (927/927)
3 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029920)
HIX0029920
HIT000093328
(
BC034000
)
Representative transcript
(Conserved hypothetical protein.)
genome : 176,999,570 - 177,001,826 (2,257)
query : 1 - 691 (691/720)
3 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029920)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK007148
HIX0029920
HIT000087261
(
BC009347
)
(Conserved hypothetical protein.)
genome : 176,999,570 - 177,001,826 (2,257)
query : 1 - 691 (691/719)
3 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029920)
HIX0029920
HIT000660367 (
NR_038435
)
(Conserved hypothetical protein.)
genome : 176,999,569 - 177,001,826 (2,258)
query : 1 - 692 (692/692)
3 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029920)
HIX0030394
HIT000098691
(
BC047605
)
Representative transcript
(Conserved hypothetical protein.)
genome : 177,001,340 - 177,005,119 (3,780)
query : 1 - 1,782 (1,782/1,818)
2 exons
identity = 0.997
5'(0.997;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030394)
HIX0030394
HIT000564925 (
ENST00000459979
)
(Conserved hypothetical protein.)
genome : 177,001,340 - 177,004,391 (3,052)
query : 1 - 1,055 (1,055/1,055)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 12, cyto_nucl 10.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030394)
HIX0149709
HIT000470935 (
ENST00000385011
)
(Non-protein coding transcript.)
genome : 177,015,031 - 177,015,140 (110)
query : 1 - 110 (110/110)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0149709)
HIX0149709
HIT000658008 (
NR_029609
)
(Non-protein coding transcript.)
genome : 177,015,031 - 177,015,140 (110)
query : 1 - 110 (110/110)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0149709)
HIX0002615
HIT000117313 (
ENST00000306324
)
(Homeobox protein, antennapedia type family protein.)
genome : 177,015,950 - 177,017,954 (2,005)
query : 1 - 1,464 (1,464/1,464)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002615)
HIX0002615
HIT000321059
(
X04706
)
(Homeobox protein Hox-D4; Homeobox protein HHO.C13; Homeobox protein Hox-4B; Homeobox protein Hox-5.1;)
genome : 177,016,113 - 177,017,951 (1,839)
query : 1 - 1,297 (1,297/1,299)
2 exons
identity = 0.994
5'(0.999;0.989)3'
coverage = 0.998
InterPro :
IPR001827 : Homeobox protein, antennapedia type, conserved site
IPR017970 : Homeobox, conserved site
IPR017995 : Homeobox protein, antennapedia type
IPR020479 : Homeodomain, metazoa
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002615)
HIX0002615
HIT000204944 (
NM_014621
)
(Homeobox protein, antennapedia type family protein.)
genome : 177,016,113 - 177,017,951 (1,839)
query : 1 - 1,298 (1,298/1,298)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002615)
HIX0002615
HIT000432751
(
AK313885
)
(Homeobox protein Hox-D4; Homeobox protein HHO.C13; Homeobox protein Hox-4B; Homeobox protein Hox-5.1;)
genome : 177,016,194 - 177,017,670 (1,477)
query : 1 - 937 (937/937)
2 exons
identity = 0.998
5'(0.997;1.000)3'
coverage = 1.000
InterPro :
IPR001827 : Homeobox protein, antennapedia type, conserved site
IPR017970 : Homeobox, conserved site
IPR017995 : Homeobox protein, antennapedia type
IPR020479 : Homeodomain, metazoa
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002615)
HIX0002615
HIT000037676
(
BC016763
)
Representative transcript
(Homeobox protein Hox-D4; Homeobox protein HHO.C13; Homeobox protein Hox-4B; Homeobox protein Hox-5.1;)
genome : 177,016,296 - 177,017,954 (1,659)
query : 2 - 1,119 (1,118/1,146)
2 exons
identity = 0.999
5'(1.000;0.998)3'
coverage = 0.999
InterPro :
IPR001827 : Homeobox protein, antennapedia type, conserved site
IPR017970 : Homeobox, conserved site
IPR017995 : Homeobox protein, antennapedia type
IPR020479 : Homeodomain, metazoa
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002615)
HIX0002615
HIT000265304
(
BC074797
)
(Homeobox protein Hox-D4; Homeobox protein HHO.C13; Homeobox protein Hox-4B; Homeobox protein Hox-5.1;)
genome : 177,016,315 - 177,017,696 (1,382)
query : 1 - 841 (841/841)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001827 : Homeobox protein, antennapedia type, conserved site
IPR017970 : Homeobox, conserved site
IPR017995 : Homeobox protein, antennapedia type
IPR020479 : Homeodomain, metazoa
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002615)
HIX0002615
HIT000570338 (
ENST00000465649
)
(Homeodomain, metazoa containing protein.)
genome : 177,017,024 - 177,020,802 (3,779)
query : 1 - 3,579 (3,579/3,579)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002615)
HIX0002615
HIT000430601
(
AK311735
)
(Homeobox protein Hox-D4; Homeobox protein HHO.C13; Homeobox protein Hox-4B; Homeobox protein Hox-5.1;)
genome : 177,017,024 - 177,018,205 (1,182)
query : 1 - 982 (982/982)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR017970 : Homeobox, conserved site
IPR020479 : Homeodomain, metazoa
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002615)
HIX0214615
HIT000508036 (
ENST00000410016
)
(Homeobox protein Hox-D3; Homeobox protein Hox-4A;)
genome : 177,025,619 - 177,037,813 (12,195)
query : 1 - 2,384 (2,384/2,384)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214615)
HIX0214615
HIT000105963 (
ENST00000249440
)
(Homeobox protein Hox-D3; Homeobox protein Hox-4A;)
genome : 177,028,805 - 177,039,577 (10,773)
query : 1 - 4,050 (4,050/4,050)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214615)
HIX0214615
HIT000032228_03
(
BC005124
)
Representative transcript
(Homeobox protein Hox-D3; Homeobox protein Hox-4A;)
genome : 177,028,805 - 177,037,826 (9,022)
query : 1 - 2,300 (2,300/2,320)
3 exons
identity = 0.999
5'(0.989;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001827 : Homeobox protein, antennapedia type, conserved site
IPR017970 : Homeobox, conserved site
IPR020479 : Homeodomain, metazoa
IPR025281 : Domain of unknown function DUF4074
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214615)
Ortholog candidate ( ->
Evola
)
Oryzias
sp. (Medaka) : AB026952
Mus
sp. (Mouse) : AK136751
Danio
sp. (Zebrafish) : DQ060564
Pongo
sp. (Orangutan) : ENSPPYT00000015065
Tetraodon
sp. (Tetraodon) : GSTENT00031464001
Rattus
sp. (Rat) : M37569
Takifugu
sp. (Fugu) : SINFRUT00000131831
Macaca
sp. (Macaque) : XM_001094981
Pan
sp. (Chimpanzee) : XM_001153177
Monodelphis
sp. (Opossum) : XM_001368590
Equus
sp. (Horse) : XM_001500059
Gallus
sp. (Chicken) : XM_428765
Canis
sp. (Dog) : XM_545539
Bos
sp. (Cow) : XM_588947
HIX0214615
HIT000203463 (
NM_006898
)
(Homeobox protein Hox-D3; Homeobox protein Hox-4A;)
genome : 177,028,805 - 177,037,826 (9,022)
query : 1 - 2,299 (2,299/2,319)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214615)
HIX0214615
HIT000033969
(
BC008789
)
(Homeobox protein Hox-D3; Homeobox protein Hox-4A;)
genome : 177,033,760 - 177,037,826 (4,067)
query : 26 - 2,231 (2,206/2,266)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 0.988
InterPro :
IPR001827 : Homeobox protein, antennapedia type, conserved site
IPR017970 : Homeobox, conserved site
IPR020479 : Homeodomain, metazoa
IPR025281 : Domain of unknown function DUF4074
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214615)
HIX0029935
HIT000659136 (
NR_033979
)
(Conserved hypothetical protein.)
genome : 177,037,925 - 177,053,686 (15,762)
query : 1 - 3,804 (3,804/3,819)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13, extr 11, cyto 5.5,
extr_plas 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029935)
HIX0029935
HIT000092195
(
BC030713
)
Representative transcript
(Conserved hypothetical protein.)
genome : 177,037,925 - 177,042,844 (4,920)
query : 1 - 4,063 (4,063/4,078)
3 exons
identity = 0.997
3'(0.997;1.000;0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13, extr 11, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029935)
HIX0029935
HIT000098612
(
BC047481
)
(Conserved hypothetical protein.)
genome : 177,037,925 - 177,042,844 (4,920)
query : 1 - 4,063 (4,063/4,078)
3 exons
identity = 0.997
3'(0.997;1.000;0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13, extr 11, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029935)
HIX0029935
HIT000514862 (
ENST00000416928
)
(Conserved hypothetical protein.)
genome : 177,037,923 - 177,043,012 (5,090)
query : 1 - 4,235 (4,235/4,235)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13, extr 11, cyto 5.5,
extr_plas 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029935)
HIX0029935
HIT000515020 (
ENST00000417086
)
(Hypothetical short protein.)
genome : 177,040,722 - 177,053,268 (12,547)
query : 1 - 984 (984/984)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 11, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029935)
HIX0029935
HIT000661366 (
ENST00000547207
)
(Hypothetical short protein.)
genome : 177,040,887 - 177,042,296 (1,410)
query : 1 - 771 (771/771)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 11, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029935)
HIX0029935
HIT000534060 (
ENST00000436126
)
(Hypothetical short protein.)
genome : 177,040,914 - 177,052,997 (12,084)
query : 1 - 945 (945/945)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 11, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029935)
HIX0029935
HIT000545472 (
ENST00000447538
)
(Hypothetical short protein.)
genome : 177,041,108 - 177,042,812 (1,705)
query : 1 - 558 (558/558)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 11, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029935)
HIX0029935
HIT000661009 (
ENST00000546798
)
(Hypothetical short protein.)
genome : 177,041,114 - 177,042,853 (1,740)
query : 1 - 581 (581/581)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 11, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029935)
HIX0029935
HIT000663213 (
ENST00000549329
)
(Hypothetical short protein.)
genome : 177,041,114 - 177,042,770 (1,657)
query : 1 - 609 (609/609)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, extr 10, cyto 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029935)
HIX0029935
HIT000511903 (
ENST00000413969
)
(Hypothetical short protein.)
genome : 177,041,184 - 177,053,686 (12,503)
query : 1 - 545 (545/545)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 11, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029935)
HIX0029935
HIT000554810 (
ENST00000456876
)
(Hypothetical short protein.)
genome : 177,041,200 - 177,042,853 (1,654)
query : 1 - 636 (636/636)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 11, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029935)
HIX0029935
HIT000665679 (
ENST00000552156
)
(Hypothetical short protein.)
genome : 177,041,200 - 177,042,811 (1,612)
query : 1 - 576 (576/576)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, extr 10, cyto 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029935)
HIX0029935
HIT000522939 (
ENST00000425005
)
(Hypothetical short protein.)
genome : 177,041,208 - 177,053,207 (12,000)
query : 1 - 623 (623/623)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, extr 10, cyto 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029935)
HIX0029935
HIT000550299 (
ENST00000452365
)
(Hypothetical short protein.)
genome : 177,041,252 - 177,053,259 (12,008)
query : 1 - 661 (661/661)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, extr 10, cyto 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029935)
HIX0162527
HIT000524549 (
ENST00000426615
)
(Hypothetical short protein.)
genome : 177,042,445 - 177,043,737 (1,293)
query : 1 - 1,122 (1,122/1,122)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 14, cyto 2.5, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162527)
HIX0002617
pHIT000074267 ( pHIT000074267 )
(Homeobox protein Hox-D1; Homeobox protein Hox-GG;)
genome : 177,052,390 - 177,054,870 (2,481)
query : 1 - 585 (585/585)
3 exons
InterPro :
IPR017970 : Homeobox, conserved site
IPR020479 : Homeodomain, metazoa
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002617)
CAGE tag :
H06BA77E0805
HIX0002617
HIT000127247 (
ENST00000331462
)
(Homeobox protein Hox-D1; Homeobox protein Hox-GG;)
genome : 177,053,307 - 177,055,688 (2,382)
query : 1 - 2,028 (2,028/2,028)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002617)
HIX0002617
HIT000074828
(
AF241528
)
Representative transcript
(Homeobox protein Hox-D1; Homeobox protein Hox-GG;)
genome : 177,053,307 - 177,055,635 (2,329)
query : 1 - 1,975 (1,975/1,991)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 0.999
InterPro :
IPR017970 : Homeobox, conserved site
IPR020479 : Homeodomain, metazoa
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002617)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000045084
Monodelphis
sp. (Opossum) : ENSMODT00000012222
Pongo
sp. (Orangutan) : ENSPPYT00000015066
Pan
sp. (Chimpanzee) : ENSPTRT00000056308
Mus
sp. (Mouse) : X60034
Rattus
sp. (Rat) : XM_001064329
Gallus
sp. (Chicken) : XM_001234396
Canis
sp. (Dog) : XM_847374
Bos
sp. (Cow) : XM_867100
HIX0002617
HIT000209221 (
NM_024501
)
(Homeobox protein Hox-D1; Homeobox protein Hox-GG;)
genome : 177,053,307 - 177,055,635 (2,329)
query : 1 - 1,975 (1,975/1,991)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002617)
HIX0002617
HIT000432986
(
AK314120
)
(Homeobox protein Hox-D1; Homeobox protein Hox-GG;)
genome : 177,053,392 - 177,054,870 (1,479)
query : 1 - 1,125 (1,125/1,125)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR017970 : Homeobox, conserved site
IPR020479 : Homeodomain, metazoa
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002617)
HIX0002617
HIT000091533
(
BC028190
)
(Homeobox protein Hox-B1; Ghox-lab;)
genome : 177,053,403 - 177,055,634 (2,232)
query : 1 - 1,702 (1,702/1,738)
5 exons
identity = 0.995
5'(1.000;0.963;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3.5, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002617)
HIX0002617
HIT000036726
(
BC014477
)
(Homeobox protein Hox-D1; Homeobox protein Hox-GG;)
genome : 177,053,403 - 177,055,635 (2,233)
query : 1 - 1,879 (1,879/1,899)
2 exons
identity = 0.999
5'(0.999;1.000)3'
coverage = 0.999
InterPro :
IPR017970 : Homeobox, conserved site
IPR020479 : Homeodomain, metazoa
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002617)
HIX0002617
HIT000327504
(
Z49995
)
(Homeobox protein Hox-D1; Homeobox protein Hox-GG;)
genome : 177,054,647 - 177,057,266 (2,620)
query : 1 - 2,615 (2,615/2,615)
1 exon
identity = 0.991
5'(0.991)3'
coverage = 1.000
InterPro :
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002617)
HIX0180281
HIT000311596_02 (
ENST00000357790
)
(Hypothetical protein.)
genome : 177,065,599 - 177,066,111 (513)
query : 5 - 442 (438/445)
2 exons
identity = 0.954
3'(0.979;0.926)5'
coverage = 0.984
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, mito 7, nucl 5, cysk 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0180281)
HIX0180281
HIT000505197 (
ENST00000405359
)
(Conserved hypothetical protein.)
genome : 177,065,636 - 177,065,980 (345)
query : 1 - 345 (345/345)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, cyto 10, extr 9, nucl 6, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0180281)
HIX0180281
pHIT000005198 ( pHIT000005198 )
Representative transcript
(Conserved hypothetical protein.)
genome : 177,065,636 - 177,065,980 (345)
query : 1 - 345 (345/345)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0180281)
CAGE tag :
H06BA77E0805
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000015067
Macaca
sp. (Macaque) : XM_001094450
Pan
sp. (Chimpanzee) : XM_001153228
Bos
sp. (Cow) : XM_001251850
Monodelphis
sp. (Opossum) : XM_001373413
Equus
sp. (Horse) : XM_001493433
HIX0180304
HIT000510579 (
ENST00000412645
)
(Ribosomal protein S2 family protein.)
genome : 177,106,839 - 177,107,721 (883)
query : 1 - 883 (883/883)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0180304)
HIX0002618
HIT000203145 (
NM_006554
)
(Metaxin-2; Mitochondrial outer membrane import complex protein 2;)
genome : 177,134,123 - 177,202,752 (68,630)
query : 1 - 1,387 (1,387/1,399)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, mito 9, cyto_nucl 8, extr 6, nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002618)
HIX0002618
HIT000563660 (
NR_027850
)
(Metaxin-2; Mitochondrial outer membrane import complex protein 2;)
genome : 177,134,123 - 177,202,752 (68,630)
query : 1 - 1,591 (1,591/1,603)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 6, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002618)
HIX0002618
HIT000518798 (
ENST00000420864
)
(Metaxin-2; Mitochondrial outer membrane import complex protein 2;)
genome : 177,134,123 - 177,202,753 (68,631)
query : 1 - 1,592 (1,592/1,592)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 6, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002618)
HIX0002618
HIT000262799
(
BC067831
)
Representative transcript
(Metaxin-2; Mitochondrial outer membrane import complex protein 2;)
genome : 177,134,144 - 177,202,659 (68,516)
query : 1 - 1,273 (1,273/1,290)
10 exons
identity = 0.999
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR004046 : Glutathione S-transferase, C-terminal
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR019564 : Mitochondrial outer membrane transport complex, Sam37/metaxin
GO :
0005741 : Cellular Component : mitochondrial outer membrane
0006626 : Biological Process : protein targeting to mitochondrion
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, mito 9, cyto_nucl 8, extr 6, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002618)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK083055
Danio
sp. (Zebrafish) : AY289938
Rattus
sp. (Rat) : BC086360
Bos
sp. (Cow) : BC148004
Gallus
sp. (Chicken) : BX931518
Monodelphis
sp. (Opossum) : ENSMODT00000012239
Oryzias
sp. (Medaka) : ENSORLT00000001651
Pongo
sp. (Orangutan) : ENSPPYT00000015068
Tetraodon
sp. (Tetraodon) : GSTENT00018722001
Takifugu
sp. (Fugu) : SINFRUT00000153158
Macaca
sp. (Macaque) : XM_001095193
Pan
sp. (Chimpanzee) : XM_001153838
Equus
sp. (Horse) : XM_001496742
Canis
sp. (Dog) : XM_535974
HIX0002618
HIT000105964 (
ENST00000249442
)
(Metaxin-2; Mitochondrial outer membrane import complex protein 2;)
genome : 177,134,147 - 177,202,753 (68,607)
query : 1 - 1,364 (1,364/1,364)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, mito 9, cyto_nucl 8, extr 6, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002618)
HIX0002618
HIT000064530
(
AF053551
)
(Metaxin-2; Mitochondrial outer membrane import complex protein 2;)
genome : 177,134,158 - 177,202,662 (68,505)
query : 9 - 1,270 (1,262/1,270)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004046 : Glutathione S-transferase, C-terminal
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR019564 : Mitochondrial outer membrane transport complex, Sam37/metaxin
GO :
0005741 : Cellular Component : mitochondrial outer membrane
0006626 : Biological Process : protein targeting to mitochondrion
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, mito 9, cyto_nucl 8, extr 6, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002618)
HIX0002618
HIT000003761
(
AK001287
)
(Metaxin-2; Mitochondrial outer membrane import complex protein 2;)
genome : 177,134,173 - 177,202,662 (68,490)
query : 3 - 1,249 (1,247/1,249)
10 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;0.987;1.000;1.000;
1.000;1.000;0.993)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, mito 9, cyto_nucl 8, extr 6, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002618)
HIX0002618
HIT000422156
(
AK289359
)
(Metaxin-2; Mitochondrial outer membrane import complex protein 2;)
genome : 177,134,173 - 177,202,426 (68,254)
query : 2 - 1,012 (1,011/1,012)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.995)3'
coverage = 0.999
InterPro :
IPR004046 : Glutathione S-transferase, C-terminal
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR019564 : Mitochondrial outer membrane transport complex, Sam37/metaxin
GO :
0005741 : Cellular Component : mitochondrial outer membrane
0006626 : Biological Process : protein targeting to mitochondrion
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, mito 9, cyto_nucl 8, extr 6, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002618)
HIX0002618
HIT000521395 (
ENST00000423461
)
(Metaxin-2; Mitochondrial outer membrane import complex protein 2;)
genome : 177,134,180 - 177,193,050 (58,871)
query : 1 - 618 (618/618)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, mito 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002618)
HIX0002618
HIT000476009 (
ENST00000392529
)
(Metaxin-2; Mitochondrial outer membrane import complex protein 2;)
genome : 177,134,187 - 177,202,746 (68,560)
query : 1 - 1,521 (1,521/1,521)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 6, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002618)
HIX0002618
HIT000499531
(
AK315918
)
(Metaxin-2; Mitochondrial outer membrane import complex protein 2;)
genome : 177,134,187 - 177,202,746 (68,560)
query : 1 - 1,521 (1,521/1,521)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;0.979;1.000;0.987;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004046 : Glutathione S-transferase, C-terminal
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR019564 : Mitochondrial outer membrane transport complex, Sam37/metaxin
GO :
0005741 : Cellular Component : mitochondrial outer membrane
0006626 : Biological Process : protein targeting to mitochondrion
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 6, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002618)
HIX0002618
HIT000266193
(
BC088359
)
(Metaxin-2; Mitochondrial outer membrane import complex protein 2;)
genome : 177,134,188 - 177,202,663 (68,476)
query : 1 - 1,233 (1,233/1,266)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004046 : Glutathione S-transferase, C-terminal
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR019564 : Mitochondrial outer membrane transport complex, Sam37/metaxin
GO :
0005741 : Cellular Component : mitochondrial outer membrane
0006626 : Biological Process : protein targeting to mitochondrion
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, mito 9, cyto_nucl 8, extr 6, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002618)
HIX0002618
HIT000050679
(
BC017271
)
(Metaxin-2; Mitochondrial outer membrane import complex protein 2;)
genome : 177,134,193 - 177,202,663 (68,471)
query : 1 - 1,432 (1,432/1,455)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004046 : Glutathione S-transferase, C-terminal
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR019564 : Mitochondrial outer membrane transport complex, Sam37/metaxin
GO :
0005741 : Cellular Component : mitochondrial outer membrane
0006626 : Biological Process : protein targeting to mitochondrion
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 6, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002618)
HIX0002618
HIT000498188
(
AK303564
)
(Metaxin-2; Mitochondrial outer membrane import complex protein 2;)
genome : 177,134,198 - 177,202,636 (68,439)
query : 1 - 1,400 (1,400/1,400)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;0.979;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004046 : Glutathione S-transferase, C-terminal
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR019564 : Mitochondrial outer membrane transport complex, Sam37/metaxin
GO :
0005741 : Cellular Component : mitochondrial outer membrane
0006626 : Biological Process : protein targeting to mitochondrion
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 6, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002618)
HIX0002618
HIT000541175 (
ENST00000443241
)
(Metaxin-2; Mitochondrial outer membrane import complex protein 2;)
genome : 177,134,198 - 177,202,407 (68,210)
query : 1 - 799 (799/799)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, mito 13, cyto_nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002618)
HIX0002618
HIT000550799 (
ENST00000452865
)
(Metaxin-2; Mitochondrial outer membrane import complex protein 2;)
genome : 177,134,230 - 177,202,358 (68,129)
query : 1 - 817 (817/817)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, extr 9, cyto_nucl 9, nucl 5.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002618)
HIX0200426
HIT000526591 (
ENST00000428657
)
(Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain containing protein.)
genome : 177,203,365 - 177,203,805 (441)
query : 1 - 441 (441/441)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 7, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200426)
HIX0030488
HIT000510087 (
ENST00000412153
)
(Hypothetical short protein.)
genome : 177,370,973 - 177,372,430 (1,458)
query : 1 - 495 (495/495)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10.5, mito 9, extr 8, cyto_nucl 7.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030488)
HIX0162654
HIT000529389 (
ENST00000431455
)
(Hypothetical short protein.)
genome : 177,389,607 - 177,396,411 (6,805)
query : 1 - 822 (822/822)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 3, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162654)
HIX0029921
HIT000036294
(
BC013588
)
(Conserved hypothetical protein.)
genome : 177,494,320 - 177,495,035 (716)
query : 1 - 716 (716/730)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 8, cyto_nucl 7, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029921)
HIX0029921
HIT000726064 (
NR_040001
)
(Conserved hypothetical protein.)
genome : 177,494,309 - 177,502,302 (7,994)
query : 1 - 1,058 (1,058/1,058)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 7, cyto 4.5, cyto_nucl 3.5,
E.R._mito 3.5, mito_pero 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029921)
HIX0029921
HIT000114196 (
ENST00000295549
)
(Conserved hypothetical protein.)
genome : 177,494,317 - 177,502,659 (8,343)
query : 1 - 1,407 (1,407/1,407)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, mito 9.5, cyto_mito 8.5, cyto_nucl 8, nucl 6,
cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029921)
HIX0029921
HIT000088127
(
BC013438
)
Representative transcript
(Conserved hypothetical protein.)
genome : 177,494,568 - 177,502,659 (8,092)
query : 1 - 1,156 (1,156/1,172)
3 exons
identity = 0.996
3'(1.000;0.989;0.991)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 7.5, cyto_mito 7.16667, cyto_nucl 6.5,
cyto 5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029921)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : XR_011716
Pan
sp. (Chimpanzee) : XR_023598
HIX0029921
HIT000131667 (
ENST00000339037
)
(Conserved hypothetical protein.)
genome : 177,494,893 - 177,502,290 (7,398)
query : 1 - 838 (838/838)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 8, nucl 5, cyto_mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029921)
HIX0029921
HIT000541604 (
ENST00000443670
)
(Conserved hypothetical protein.)
genome : 177,502,438 - 177,520,686 (18,249)
query : 1 - 699 (699/699)
4 exons
identity = 0.987
3'(0.987;0.940;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 12.5, extr 9, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029921)
HIX0204233
HIT000615621 (
ENST00000516218
)
(Non-protein coding transcript.)
genome : 177,529,404 - 177,529,494 (91)
query : 1 - 91 (91/91)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204233)
HIX0002620
HIT000536077 (
ENST00000438143
)
(Hypothetical short protein.)
genome : 177,588,996 - 177,630,839 (41,844)
query : 1 - 532 (532/532)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 6, nucl 5, mito 5, mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002620)
HIX0002620
HIT000025884
(
AL137596
)
Representative transcript
(Conserved hypothetical protein.)
genome : 177,618,128 - 177,676,934 (58,807)
query : 3 - 4,671 (4,669/4,691)
5 exons
identity = 0.998
3'(1.000;0.998;1.000;1.000;0.978)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 21, cyto_nucl 14.5, mito 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002620)
HIX0002620
HIT000526217 (
ENST00000428283
)
(Conserved hypothetical protein.)
genome : 177,618,128 - 177,676,934 (58,807)
query : 3 - 4,673 (4,671/4,673)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.978)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 21, cyto_nucl 14.5, mito 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002620)
HIX0002620
HIT000528394 (
ENST00000430460
)
(Hypothetical short protein.)
genome : 177,625,965 - 177,627,344 (1,380)
query : 1 - 579 (579/579)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 8, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002620)
HIX0002620
HIT000549785 (
ENST00000451851
)
(Hypothetical short protein.)
genome : 177,626,136 - 177,684,038 (57,903)
query : 1 - 566 (566/566)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002620)
HIX0161937
HIT000355756 (
ENST00000374476
)
(Glycoside hydrolase, family 29 protein.)
genome : 177,669,715 - 177,671,065 (1,351)
query : 1 - 1,351 (1,351/1,351)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12, mito 7, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161937)
HIX0162685
HIT000530762 (
ENST00000432828
)
(Ribosomal protein L29e family protein.)
genome : 177,674,154 - 177,674,587 (434)
query : 1 - 434 (434/434)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 9, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162685)
HIX0017237
HIT000016836
(
AK091969
)
Representative transcript
(Hypothetical protein.)
genome : 177,686,758 - 177,688,381 (1,624)
query : 1 - 1,624 (1,624/1,624)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, mito 11, cyto_nucl 9, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017237)
HIX0161822
HIT000530859 (
ENST00000432925
)
(Hypothetical short protein.)
genome : 177,710,721 - 177,714,156 (3,436)
query : 1 - 563 (563/563)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, mito_nucl 13, extr 4, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161822)
HIX0161822
HIT000555690 (
ENST00000457756
)
(Hypothetical short protein.)
genome : 177,710,784 - 177,714,131 (3,348)
query : 1 - 558 (558/558)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 10, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161822)
HIX0161839
HIT000549936 (
ENST00000452002
)
(Conserved hypothetical protein.)
genome : 177,855,236 - 177,921,044 (65,809)
query : 1 - 544 (544/544)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 11.5, cyto 9, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161839)
HIX0161839
HIT000539139 (
ENST00000441205
)
(Conserved hypothetical protein.)
genome : 177,855,570 - 178,029,244 (173,675)
query : 1 - 567 (567/567)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 10.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161839)
HIX0163242
HIT000553350 (
ENST00000455416
)
(Non-protein coding transcript.)
genome : 178,020,350 - 178,077,390 (57,041)
query : 1 - 218 (218/218)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163242)
HIX0180341
HIT000514088 (
ENST00000416154
)
(U box domain containing protein.)
genome : 178,042,423 - 178,042,983 (561)
query : 1 - 561 (561/561)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 10.5, extr 8, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0180341)
HIX0123061
HIT000475625 (
ENST00000392131
)
(Intermediate filament protein family protein.)
genome : 178,062,713 - 178,063,275 (563)
query : 1 - 563 (563/563)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14, extr 8, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0123061)
HIX0002621
HIT000476004_01 (
ENST00000392524
)
(Heterogeneous nuclear ribonucleoprotein A3; hnRNP A3;)
genome : 178,077,291 - 178,084,813 (7,523)
query : 1 - 2,067 (2,067/2,067)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000319011 (
NM_194247
)
(Heterogeneous nuclear ribonucleoprotein A3; hnRNP A3;)
genome : 178,077,422 - 178,088,685 (11,264)
query : 1 - 5,808 (5,808/5,808)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000693598_01 (
ENST00000581696
)
(Non-protein coding transcript.)
genome : 178,077,454 - 178,077,527 (74)
query : 1 - 74 (74/74)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000696260_01 (
ENST00000584390
)
(Non-protein coding transcript.)
genome : 178,077,454 - 178,077,527 (74)
query : 1 - 74 (74/74)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000725709_01 (
NR_039646
)
(Non-protein coding transcript.)
genome : 178,077,454 - 178,077,527 (74)
query : 1 - 74 (74/74)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000509463 (
ENST00000411529
)
(Heterogeneous nuclear ribonucleoprotein A3.)
genome : 178,077,477 - 178,088,686 (11,210)
query : 1 - 5,688 (5,688/5,688)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000500047
(
AK316434
)
(Heterogeneous nuclear ribonucleoprotein A3.)
genome : 178,077,488 - 178,084,504 (7,017)
query : 1 - 1,495 (1,495/1,495)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000487749
(
AK293125
)
(Heterogeneous nuclear ribonucleoprotein A3.)
genome : 178,077,488 - 178,084,385 (6,898)
query : 1 - 1,376 (1,376/1,376)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000499311
(
AK304687
)
(Heterogeneous nuclear ribonucleoprotein A3; hnRNP A3;)
genome : 178,077,493 - 178,084,548 (7,056)
query : 1 - 1,435 (1,435/1,435)
10 exons
identity = 0.997
5'(1.000;1.000;0.993;1.000;1.000;1.000;0.979;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000055864
(
BX647217
)
(Heterogeneous nuclear ribonucleoprotein A3.)
genome : 178,077,499 - 178,088,579 (11,081)
query : 1 - 2,694 (2,694/2,743)
10 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;0.989;0.967;1.000;
1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR021662 : Nuclear factor hnRNPA1
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000497832
(
AK303208
)
(Heterogeneous nuclear ribonucleoprotein A3.)
genome : 178,077,499 - 178,084,833 (7,335)
query : 1 - 1,162 (1,162/1,162)
6 exons
identity = 0.992
5'(1.000;1.000;0.936;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR021662 : Nuclear factor hnRNPA1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000533645 (
ENST00000435711
)
(Heterogeneous nuclear ribonucleoprotein A3; hnRNP A3;)
genome : 178,077,500 - 178,084,593 (7,094)
query : 1 - 1,731 (1,731/1,731)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000340156
(
BC112027
)
Representative transcript
(Heterogeneous nuclear ribonucleoprotein A3; hnRNP A3;)
genome : 178,077,500 - 178,084,054 (6,555)
query : 1 - 1,192 (1,192/1,192)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB173252
Mus
sp. (Mouse) : BC038364
Rattus
sp. (Rat) : BC081878
Danio
sp. (Zebrafish) : BC122383
Gallus
sp. (Chicken) : CR388755
Tetraodon
sp. (Tetraodon) : CR734459
Oryzias
sp. (Medaka) : ENSORLT00000010040
Pongo
sp. (Orangutan) : ENSPPYT00000015069
Takifugu
sp. (Fugu) : SINFRUT00000179456
Bos
sp. (Cow) : XM_001250989
Monodelphis
sp. (Opossum) : XM_001368477
Equus
sp. (Horse) : XM_001496972
Pan
sp. (Chimpanzee) : XM_525973
Canis
sp. (Dog) : XM_856815
Macaca
sp. (Macaque) : XR_011232
HIX0002621
HIT000386923
(
BC113470
)
(Heterogeneous nuclear ribonucleoprotein A3; hnRNP A3;)
genome : 178,077,500 - 178,084,054 (6,555)
query : 1 - 1,192 (1,192/1,192)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.988)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000261414
(
BC064494
)
(Heterogeneous nuclear ribonucleoprotein A3; hnRNP A3;)
genome : 178,077,510 - 178,084,505 (6,996)
query : 1 - 1,243 (1,243/1,291)
9 exons
identity = 0.992
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.919;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR021662 : Nuclear factor hnRNPA1
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000253206
(
AY363225
)
(Heterogeneous nuclear ribonucleoprotein A3; hnRNP A3;)
genome : 178,077,528 - 178,084,027 (6,500)
query : 1 - 1,137 (1,137/1,137)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.989;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000661827_01 (
ENST00000547726
)
(Heterogeneous nuclear ribonucleoprotein A3; hnRNP A3;)
genome : 178,077,528 - 178,084,020 (6,493)
query : 1 - 1,138 (1,138/1,138)
10 exons
identity = 0.955
5'(0.847;0.959;0.973;0.967;0.967;0.969;0.975;
0.926;0.984;0.935)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000522670_02 (
ENST00000424736
)
(Heterogeneous nuclear ribonucleoprotein A3; hnRNP A3;)
genome : 178,080,265 - 178,084,022 (3,758)
query : 5 - 1,029 (1,025/1,029)
9 exons
identity = 0.980
5'(0.984;0.986;0.967;1.000;0.983;0.988;0.965;
0.976;1.000)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 24, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000576552_02 (
ENST00000472163
)
(Heterogeneous nuclear ribonucleoprotein A3; hnRNP A3;)
genome : 178,080,276 - 178,084,031 (3,756)
query : 1 - 1,006 (1,006/1,006)
9 exons
identity = 0.996
5'(1.000;1.000;1.000;0.978;1.000;1.000;0.993;
0.992;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000263205
(
BC069022
)
(Heterogeneous nuclear ribonucleoprotein A3.)
genome : 178,081,244 - 178,084,505 (3,262)
query : 1 - 956 (956/973)
7 exons
identity = 0.999
5'(1.000;1.000;0.988;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 15.5, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000265859
(
BC080591
)
(Heterogeneous nuclear ribonucleoprotein A3.)
genome : 178,081,244 - 178,084,505 (3,262)
query : 1 - 956 (956/973)
7 exons
identity = 0.999
5'(1.000;1.000;0.988;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 15.5, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000530391_01 (
ENST00000432457
)
(Heterogeneous nuclear ribonucleoprotein A3 homolog 1; hnRNP A3(A);)
genome : 178,081,254 - 178,084,415 (3,162)
query : 1 - 643 (643/643)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 14.5, cyto 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000027158
(
AL832246
)
(Heterogeneous nuclear ribonucleoprotein A3.)
genome : 178,081,586 - 178,088,577 (6,992)
query : 9 - 2,213 (2,205/2,230)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.998)3'
coverage = 0.996
InterPro :
IPR021662 : Nuclear factor hnRNPA1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, cyto_nucl 11, cyto 9, extr 6, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000092660
(
BC032437
)
(Heterogeneous nuclear ribonucleoprotein A3.)
genome : 178,082,451 - 178,086,110 (3,660)
query : 7 - 2,295 (2,289/2,309)
4 exons
identity = 0.999
5'(0.992;1.000;1.000;0.999)3'
coverage = 0.997
InterPro :
IPR021662 : Nuclear factor hnRNPA1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 12, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000334098
(
BC053640
)
(Heterogeneous nuclear ribonucleoprotein A3.)
genome : 178,082,552 - 178,086,060 (3,509)
query : 1 - 2,138 (2,138/2,153)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR021662 : Nuclear factor hnRNPA1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 10.5, cyto_nucl 9.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000510472_01 (
ENST00000412538
)
(Heterogeneous nuclear ribonucleoprotein A3.)
genome : 178,082,552 - 178,084,043 (1,492)
query : 1 - 214 (214/221)
3 exons
identity = 0.981
5'(1.000;0.976;0.986)3'
coverage = 0.968
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 10.5, cyto_nucl 9.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000081125
(
AF517524
)
(Heterogeneous nuclear ribonucleoprotein A3.)
genome : 178,083,764 - 178,084,400 (637)
query : 16 - 472 (457/472)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.968
InterPro :
IPR021662 : Nuclear factor hnRNPA1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10, extr 9, cyto 9, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000476817_03 (
ENST00000393361
)
(Heterogeneous nuclear ribonucleoprotein A3.)
genome : 178,083,764 - 178,084,027 (264)
query : 16 - 192 (177/192)
2 exons
identity = 0.994
5'(0.992;1.000)3'
coverage = 0.922
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10, extr 9, cyto 9, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000260246
(
BC061894
)
(Heterogeneous nuclear ribonucleoprotein A3.)
genome : 178,083,764 - 178,084,859 (1,096)
query : 1 - 916 (916/931)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR021662 : Nuclear factor hnRNPA1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, nucl 9, cyto 9, cyto_nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0002621
HIT000587039 (
ENST00000483137
)
(Conserved hypothetical protein.)
genome : 178,083,821 - 178,084,534 (714)
query : 1 - 627 (627/627)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002621)
HIX0019601
HIT000556537 (
ENST00000458603
)
(Nuclear factor erythroid 2-related factor 2 isoform 3.)
genome : 178,092,323 - 178,097,215 (4,893)
query : 1 - 455 (455/455)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0162934
HIT000541229 (
ENST00000443295
)
(Conserved hypothetical protein.)
genome : 178,093,919 - 178,094,234 (316)
query : 1 - 316 (316/316)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11, extr 7, mito 2, pero 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162934)
HIX0019601
HIT000035288
(
BC011558
)
Representative transcript
(Nuclear factor erythroid 2-related factor 2; NF-E2-related factor 2; NFE2-related factor 2; HEBP1; Nuclear factor, erythroid derived 2, like 2;)
genome : 178,095,038 - 178,129,417 (34,380)
query : 1 - 2,406 (2,406/2,439)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : AB081314
Rattus
sp. (Rat) : BC061724
Bos
sp. (Cow) : BT030494
Pongo
sp. (Orangutan) : CR858775
Gallus
sp. (Chicken) : D49365
Equus
sp. (Horse) : ENSECAT00000005851
Oryzias
sp. (Medaka) : ENSORLT00000021981
Pan
sp. (Chimpanzee) : ENSPTRT00000047689
Tetraodon
sp. (Tetraodon) : GSTENT00031468001
Takifugu
sp. (Fugu) : SINFRUT00000131826
Mus
sp. (Mouse) : U20532
Macaca
sp. (Macaque) : XM_001096024
Monodelphis
sp. (Opossum) : XM_001377118
Canis
sp. (Dog) : XM_535975
HIX0019601
HIT000057694
(
BX649047
)
(Nuclear factor erythroid 2-related factor 2 isoform 2.)
genome : 178,095,038 - 178,128,269 (33,232)
query : 1 - 2,387 (2,387/2,407)
5 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0019601
HIT000216524
(
S74017
)
(Nuclear factor erythroid 2-related factor 2 isoform 1.)
genome : 178,095,038 - 178,129,295 (34,258)
query : 1 - 2,287 (2,287/2,304)
5 exons
identity = 0.997
3'(0.998;1.000;1.000;0.993;1.000)5'
coverage = 1.000
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0019601
HIT000057718
(
BX649071
)
(Nuclear factor erythroid 2-related factor 2 isoform 2.)
genome : 178,095,038 - 178,098,960 (3,923)
query : 1 - 2,189 (2,189/2,205)
4 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0019601
HIT000202776 (
NM_006164
)
(Nuclear factor erythroid 2-related factor 2; NF-E2-related factor 2; NFE2-related factor 2; HEBP1; Nuclear factor, erythroid derived 2, like 2;)
genome : 178,095,031 - 178,129,859 (34,829)
query : 1 - 2,855 (2,855/2,859)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0019601
HIT000561359 (
NM_001145412
)
(Nuclear factor erythroid 2-related factor 2 isoform 2.)
genome : 178,095,031 - 178,128,617 (33,587)
query : 1 - 2,742 (2,742/2,746)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0019601
HIT000561360 (
NM_001145413
)
(Nuclear factor erythroid 2-related factor 2 isoform 3.)
genome : 178,095,031 - 178,128,617 (33,587)
query : 1 - 2,721 (2,721/2,725)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0019601
HIT000480365 (
ENST00000397062
)
(Nuclear factor erythroid 2-related factor 2; NF-E2-related factor 2; NFE2-related factor 2; HEBP1; Nuclear factor, erythroid derived 2, like 2;)
genome : 178,095,033 - 178,129,859 (34,827)
query : 1 - 2,853 (2,853/2,853)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0019601
HIT000480366 (
ENST00000397063
)
(Nuclear factor erythroid 2-related factor 2 isoform 2.)
genome : 178,095,033 - 178,128,528 (33,496)
query : 1 - 2,651 (2,651/2,651)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0019601
HIT000544085 (
ENST00000446151
)
(Nuclear factor erythroid 2-related factor 2 isoform 3.)
genome : 178,095,036 - 178,128,300 (33,265)
query : 1 - 2,399 (2,399/2,399)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0019601
HIT000328721
(
AB208786
)
(Nuclear factor erythroid 2-related factor 2 isoform 2.)
genome : 178,095,039 - 178,128,241 (33,203)
query : 1 - 2,358 (2,358/2,358)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0019601
HIT000499179
(
AK304555
)
(Nuclear factor erythroid 2-related factor 2 isoform 1.)
genome : 178,095,189 - 178,128,300 (33,112)
query : 1 - 2,246 (2,246/2,246)
5 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0019601
HIT000492462
(
AK297838
)
(Nuclear factor erythroid 2-related factor 2 isoform 2.)
genome : 178,095,303 - 178,128,234 (32,932)
query : 1 - 2,087 (2,087/2,087)
5 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0019601
HIT000499761
(
AK316148
)
(Nuclear factor erythroid 2-related factor 2 isoform 1.)
genome : 178,095,458 - 178,128,182 (32,725)
query : 1 - 1,880 (1,880/1,880)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;0.996;1.000)5'
coverage = 1.000
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0019601
HIT000433682
(
AK314816
)
(Nuclear factor erythroid 2-related factor 2; NF-E2-related factor 2; NFE2-related factor 2; HEBP1; Nuclear factor, erythroid derived 2, like 2;)
genome : 178,095,513 - 178,129,859 (34,347)
query : 2 - 2,374 (2,373/2,374)
5 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;0.990)5'
coverage = 1.000
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0019601
HIT000649730
(
HM446346
)
(Nuclear factor erythroid 2-related factor 2 isoform 2.)
genome : 178,095,513 - 178,129,301 (33,789)
query : 11 - 1,825 (1,815/1,825)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.995
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0019601
HIT000547561 (
ENST00000449627
)
(Nuclear factor erythroid 2-related factor 2 isoform 3.)
genome : 178,095,718 - 178,128,239 (32,522)
query : 1 - 909 (909/909)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0019601
HIT000430261
(
AK311395
)
(Nuclear factor erythroid 2-related factor 2 isoform 2.)
genome : 178,096,442 - 178,128,295 (31,854)
query : 1 - 975 (975/975)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 12, cyto_nucl 11, nucl 9.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0019601
HIT000546716 (
ENST00000448782
)
(Nuclear factor erythroid 2-related factor 2 isoform 2.)
genome : 178,096,442 - 178,128,295 (31,854)
query : 1 - 975 (975/975)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 12, cyto_nucl 11, nucl 9.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0019601
HIT000527981 (
ENST00000430047
)
(Non-protein coding transcript.)
genome : 178,096,518 - 178,129,551 (33,034)
query : 1 - 451 (451/451)
2 exons
identity = 0.982
3'(0.974;0.987)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0019601
HIT000430554
(
AK311688
)
(Nuclear factor erythroid 2-related factor 2 isoform 2.)
genome : 178,096,579 - 178,128,528 (31,950)
query : 1 - 979 (979/979)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 13, cyto 10.5, cyto_nucl 10.5, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0019601
HIT000519863 (
ENST00000421929
)
(Nuclear factor erythroid 2-related factor 2 isoform 2.)
genome : 178,096,579 - 178,128,528 (31,950)
query : 1 - 979 (979/979)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 13, cyto 10.5, cyto_nucl 10.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0019601
HIT000429707
(
AK310841
)
(Nuclear factor erythroid 2-related factor 2 isoform 2.)
genome : 178,097,005 - 178,128,182 (31,178)
query : 1 - 1,382 (1,382/1,382)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0019601
HIT000521447 (
ENST00000423513
)
(Nuclear factor erythroid 2-related factor 2 isoform 2.)
genome : 178,097,005 - 178,128,182 (31,178)
query : 1 - 1,382 (1,382/1,382)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0019601
HIT000429522
(
AK310656
)
(Nuclear factor erythroid 2-related factor 2 isoform 3.)
genome : 178,098,205 - 178,128,265 (30,061)
query : 1 - 930 (930/930)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, extr 11, cyto_nucl 10, nucl 5.5,
extr_plas 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0019601
HIT000581677 (
ENST00000477534
)
(Nuclear factor erythroid 2-related factor 2 isoform 3.)
genome : 178,098,205 - 178,128,265 (30,061)
query : 1 - 930 (930/930)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, extr 11, cyto_nucl 10, nucl 5.5,
extr_plas 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0019601
HIT000566879 (
ENST00000462023
)
(Nuclear factor erythroid 2-related factor 2 isoform 1.)
genome : 178,098,607 - 178,129,387 (30,781)
query : 1 - 521 (521/521)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 14, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019601)
HIX0024160
HIT000048725
(
AK128852
)
Representative transcript
(Conserved hypothetical protein.)
genome : 178,107,112 - 178,111,509 (4,398)
query : 1 - 3,053 (3,053/3,286)
2 exons
identity = 0.990
3'(0.989;0.992)5'
coverage = 0.932
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13.5, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024160)
HIX0204292
HIT000659341 (
NR_036075
)
(Non-protein coding transcript.)
genome : 178,120,673 - 178,120,738 (66)
query : 1 - 66 (66/66)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204292)
HIX0204292
HIT000693856 (
ENST00000581957
)
(Non-protein coding transcript.)
genome : 178,120,673 - 178,120,738 (66)
query : 1 - 66 (66/66)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204292)
HIX0162571
HIT000526475 (
ENST00000428541
)
(Non-protein coding transcript.)
genome : 178,129,087 - 178,130,243 (1,157)
query : 1 - 499 (499/499)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162571)
HIX0214608
HIT000095785
(
BC039522
)
(Conserved hypothetical protein.)
genome : 178,148,242 - 178,187,892 (39,651)
query : 1 - 889 (889/955)
5 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, extr 4, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214608)
HIX0214608
HIT000563139 (
NR_026966
)
(Conserved hypothetical protein.)
genome : 178,148,236 - 178,257,419 (109,184)
query : 1 - 5,206 (5,206/5,223)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, plas 12, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214608)
HIX0214608
HIT000028000
(
AL833088
)
Representative transcript
(Putative uncharacterized protein FLJ44553;)
genome : 178,148,236 - 178,257,415 (109,180)
query : 2 - 5,190 (5,189/5,207)
9 exons
identity = 0.994
3'(0.994;1.000;1.000;1.000;0.988;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, plas 12, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214608)
HIX0214608
HIT000480360 (
ENST00000397057
)
(Conserved hypothetical protein.)
genome : 178,148,236 - 178,257,415 (109,180)
query : 1 - 5,202 (5,202/5,202)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, plas 12, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214608)
HIX0214608
HIT000046390
(
AK126517
)
(Putative uncharacterized protein FLJ44553;)
genome : 178,148,240 - 178,257,419 (109,180)
query : 1 - 5,147 (5,147/5,147)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.994;0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, plas 12, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214608)
HIX0214608
HIT000554680 (
ENST00000456746
)
(Conserved hypothetical protein.)
genome : 178,148,240 - 178,257,419 (109,180)
query : 1 - 5,147 (5,147/5,147)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, plas 12, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214608)
HIX0214608
HIT000528350 (
ENST00000430416
)
(Conserved hypothetical protein.)
genome : 178,148,242 - 178,187,892 (39,651)
query : 1 - 889 (889/889)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, extr 4, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214608)
HIX0214608
HIT000048291
(
AK128418
)
(Conserved hypothetical protein.)
genome : 178,148,246 - 178,151,484 (3,239)
query : 1 - 3,179 (3,179/3,179)
2 exons
identity = 0.998
3'(0.997;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, plas 12, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214608)
HIX0214608
HIT000541066 (
ENST00000443132
)
(Conserved hypothetical protein.)
genome : 178,175,455 - 178,179,646 (4,192)
query : 1 - 528 (528/528)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, cyto 9, cyto_nucl 8.16667, cyto_pero 7.83333,
mito 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214608)
HIX0214608
HIT000334586
(
BC093095
)
(Conserved hypothetical protein.)
genome : 178,186,340 - 178,257,409 (71,070)
query : 1 - 1,176 (1,176/1,208)
6 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;0.991)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214608)
HIX0214608
HIT000545347 (
ENST00000447413
)
(Conserved hypothetical protein.)
genome : 178,186,335 - 178,257,409 (71,075)
query : 1 - 1,182 (1,182/1,182)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 11.5, cyto 11.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214608)
HIX0163201
HIT000551793 (
ENST00000453859
)
(Histone H3/CENP-A family protein.)
genome : 178,209,171 - 178,209,564 (394)
query : 1 - 394 (394/394)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163201)
HIX0029990
HIT000109206 (
ENST00000264167
)
(Alkyldihydroxyacetonephosphate synthase, peroxisomal; Alkyl-DHAP synthase; EC=2.5.1.26; Aging-associated gene 5 protein; Alkylglycerone-phosphate synthase; Precursor;)
genome : 178,257,372 - 178,408,564 (151,193)
query : 1 - 7,764 (7,764/7,764)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.26
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11.5, nucl 7.5, pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029990)
HIX0029990
HIT000428580
(
AK309714
)
(Alkyldihydroxyacetonephosphate synthase, peroxisomal; Alkyl-DHAP synthase; EC=2.5.1.26; Aging-associated gene 5 protein; Alkylglycerone-phosphate synthase; Precursor;)
genome : 178,257,372 - 178,402,954 (145,583)
query : 1 - 2,154 (2,154/2,154)
20 exons
identity = 0.999
5'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.989;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.26
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
InterPro :
IPR004113 : FAD-linked oxidase, C-terminal
IPR006094 : FAD linked oxidase, N-terminal
IPR016164 : FAD-linked oxidase-like, C-terminal
IPR016166 : FAD-binding, type 2
IPR016167 : FAD-binding, type 2, subdomain 1
IPR016169 : CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
IPR025650 : Alkyldihydroxyacetonephosphate synthase
GO :
0003824 : Molecular Function : catalytic activity
0008609 : Molecular Function : alkylglycerone-phosphate synthase activity
0008610 : Biological Process : lipid biosynthetic process
0008762 : Molecular Function : UDP-N-acetylmuramate dehydrogenase activity
0016491 : Molecular Function : oxidoreductase activity
0016614 : Molecular Function : oxidoreductase activity, acting on CH-OH group of donors
0050660 : Molecular Function : flavin adenine dinucleotide binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_pero 10.5, mito 5.5, E.R._mito 5.5,
pero 5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029990)
HIX0029990
HIT000200469 (
NM_003659
)
(Alkyldihydroxyacetonephosphate synthase, peroxisomal; Alkyl-DHAP synthase; EC=2.5.1.26; Aging-associated gene 5 protein; Alkylglycerone-phosphate synthase; Precursor;)
genome : 178,257,471 - 178,408,564 (151,094)
query : 1 - 7,665 (7,665/7,674)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 2.5.1.26
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 5, pero 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029990)
HIX0029990
HIT000507912 (
ENST00000409888
)
(Alkyldihydroxyacetonephosphate synthase, peroxisomal; Alkyl-DHAP synthase; EC=2.5.1.26; Aging-associated gene 5 protein; Alkylglycerone-phosphate synthase; Precursor;)
genome : 178,257,496 - 178,403,146 (145,651)
query : 1 - 815 (815/815)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.26
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 15.5, nucl 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029990)
HIX0029990
HIT000433125
(
AK314259
)
(Alkyldihydroxyacetonephosphate synthase, peroxisomal; Alkyl-DHAP synthase; EC=2.5.1.26; Aging-associated gene 5 protein; Alkylglycerone-phosphate synthase; Precursor;)
genome : 178,257,501 - 178,402,923 (145,423)
query : 1 - 1,994 (1,994/1,994)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.26
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
InterPro :
IPR004113 : FAD-linked oxidase, C-terminal
IPR006094 : FAD linked oxidase, N-terminal
IPR016164 : FAD-linked oxidase-like, C-terminal
IPR016166 : FAD-binding, type 2
IPR016167 : FAD-binding, type 2, subdomain 1
IPR016169 : CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
IPR025650 : Alkyldihydroxyacetonephosphate synthase
GO :
0003824 : Molecular Function : catalytic activity
0008609 : Molecular Function : alkylglycerone-phosphate synthase activity
0008610 : Biological Process : lipid biosynthetic process
0008762 : Molecular Function : UDP-N-acetylmuramate dehydrogenase activity
0016491 : Molecular Function : oxidoreductase activity
0016614 : Molecular Function : oxidoreductase activity, acting on CH-OH group of donors
0050660 : Molecular Function : flavin adenine dinucleotide binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 5, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029990)
HIX0029990
HIT000325523
(
Y09443
)
(Alkyldihydroxyacetonephosphate synthase, peroxisomal; Alkyl-DHAP synthase; EC=2.5.1.26; Aging-associated gene 5 protein; Alkylglycerone-phosphate synthase; Precursor;)
genome : 178,257,503 - 178,403,005 (145,503)
query : 1 - 2,074 (2,074/2,074)
20 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.988;1.000;1.000;1.000;1.000;0.987;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.26
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
InterPro :
IPR004113 : FAD-linked oxidase, C-terminal
IPR006094 : FAD linked oxidase, N-terminal
IPR016164 : FAD-linked oxidase-like, C-terminal
IPR016166 : FAD-binding, type 2
IPR016167 : FAD-binding, type 2, subdomain 1
IPR016169 : CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
IPR025650 : Alkyldihydroxyacetonephosphate synthase
GO :
0003824 : Molecular Function : catalytic activity
0008609 : Molecular Function : alkylglycerone-phosphate synthase activity
0008610 : Biological Process : lipid biosynthetic process
0008762 : Molecular Function : UDP-N-acetylmuramate dehydrogenase activity
0016491 : Molecular Function : oxidoreductase activity
0016614 : Molecular Function : oxidoreductase activity, acting on CH-OH group of donors
0050660 : Molecular Function : flavin adenine dinucleotide binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 5, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029990)
HIX0029990
HIT000435175
(
BC141820
)
(Alkyldihydroxyacetonephosphate synthase, peroxisomal; Alkyl-DHAP synthase; EC=2.5.1.26; Aging-associated gene 5 protein; Alkylglycerone-phosphate synthase; Precursor;)
genome : 178,257,507 - 178,403,013 (145,507)
query : 2 - 2,078 (2,077/2,104)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.995)3'
coverage = 1.000
EC number :
EC 2.5.1.26
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
InterPro :
IPR004113 : FAD-linked oxidase, C-terminal
IPR006094 : FAD linked oxidase, N-terminal
IPR016164 : FAD-linked oxidase-like, C-terminal
IPR016166 : FAD-binding, type 2
IPR016167 : FAD-binding, type 2, subdomain 1
IPR016169 : CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
IPR025650 : Alkyldihydroxyacetonephosphate synthase
GO :
0003824 : Molecular Function : catalytic activity
0008609 : Molecular Function : alkylglycerone-phosphate synthase activity
0008610 : Biological Process : lipid biosynthetic process
0008762 : Molecular Function : UDP-N-acetylmuramate dehydrogenase activity
0016491 : Molecular Function : oxidoreductase activity
0016614 : Molecular Function : oxidoreductase activity, acting on CH-OH group of donors
0050660 : Molecular Function : flavin adenine dinucleotide binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 5, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029990)
HIX0029990
HIT000331898
(
AY544121
)
Representative transcript
(Alkyldihydroxyacetonephosphate synthase, peroxisomal; Alkyl-DHAP synthase; EC=2.5.1.26; Aging-associated gene 5 protein; Alkylglycerone-phosphate synthase; Precursor;)
genome : 178,257,518 - 178,403,977 (146,460)
query : 1 - 3,031 (3,031/3,031)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.988;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.26
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
InterPro :
IPR004113 : FAD-linked oxidase, C-terminal
IPR006094 : FAD linked oxidase, N-terminal
IPR016164 : FAD-linked oxidase-like, C-terminal
IPR016166 : FAD-binding, type 2
IPR016167 : FAD-binding, type 2, subdomain 1
IPR016169 : CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
IPR025650 : Alkyldihydroxyacetonephosphate synthase
GO :
0003824 : Molecular Function : catalytic activity
0008609 : Molecular Function : alkylglycerone-phosphate synthase activity
0008610 : Biological Process : lipid biosynthetic process
0008762 : Molecular Function : UDP-N-acetylmuramate dehydrogenase activity
0016491 : Molecular Function : oxidoreductase activity
0016614 : Molecular Function : oxidoreductase activity, acting on CH-OH group of donors
0050660 : Molecular Function : flavin adenine dinucleotide binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 5, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029990)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC063086
Danio
sp. (Zebrafish) : ENSDART00000102948
Equus
sp. (Horse) : ENSECAT00000009408
Oryzias
sp. (Medaka) : ENSORLT00000021993
Pongo
sp. (Orangutan) : ENSPPYT00000015075
Tetraodon
sp. (Tetraodon) : GSTENT00031469001
Takifugu
sp. (Fugu) : SINFRUT00000131824
Pan
sp. (Chimpanzee) : XM_001154263
Monodelphis
sp. (Opossum) : XM_001368623
Gallus
sp. (Chicken) : XM_421987
Canis
sp. (Dog) : XM_545543
Bos
sp. (Cow) : XM_864645
Macaca
sp. (Macaque) : XR_011839
HIX0029990
HIT000499853
(
AK316240
)
(Alkyldihydroxyacetonephosphate synthase, peroxisomal; Alkyl-DHAP synthase; EC=2.5.1.26; Aging-associated gene 5 protein; Alkylglycerone-phosphate synthase; Precursor;)
genome : 178,257,771 - 178,364,409 (106,639)
query : 8 - 1,254 (1,247/1,254)
14 exons
identity = 0.996
5'(1.000;1.000;0.989;1.000;0.987;1.000;0.988;
1.000;1.000;0.991;1.000;1.000;0.987;1.000)3'
coverage = 0.994
EC number :
EC 2.5.1.26
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
InterPro :
IPR004113 : FAD-linked oxidase, C-terminal
IPR006094 : FAD linked oxidase, N-terminal
IPR016166 : FAD-binding, type 2
IPR016167 : FAD-binding, type 2, subdomain 1
IPR016169 : CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
GO :
0003824 : Molecular Function : catalytic activity
0008762 : Molecular Function : UDP-N-acetylmuramate dehydrogenase activity
0016491 : Molecular Function : oxidoreductase activity
0016614 : Molecular Function : oxidoreductase activity, acting on CH-OH group of donors
0050660 : Molecular Function : flavin adenine dinucleotide binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 10, cyto_mito 10, mito_nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029990)
HIX0029990
HIT000490863
(
AK296239
)
(Alkyldihydroxyacetonephosphate synthase, peroxisomal; Alkyl-DHAP synthase; EC=2.5.1.26; Aging-associated gene 5 protein; Alkylglycerone-phosphate synthase; Precursor;)
genome : 178,257,769 - 178,402,971 (145,203)
query : 4 - 1,852 (1,849/1,852)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
EC number :
EC 2.5.1.26
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
InterPro :
IPR004113 : FAD-linked oxidase, C-terminal
IPR006094 : FAD linked oxidase, N-terminal
IPR016164 : FAD-linked oxidase-like, C-terminal
IPR016166 : FAD-binding, type 2
IPR016167 : FAD-binding, type 2, subdomain 1
IPR016169 : CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
IPR025650 : Alkyldihydroxyacetonephosphate synthase
GO :
0003824 : Molecular Function : catalytic activity
0008609 : Molecular Function : alkylglycerone-phosphate synthase activity
0008610 : Biological Process : lipid biosynthetic process
0008762 : Molecular Function : UDP-N-acetylmuramate dehydrogenase activity
0016491 : Molecular Function : oxidoreductase activity
0016614 : Molecular Function : oxidoreductase activity, acting on CH-OH group of donors
0050660 : Molecular Function : flavin adenine dinucleotide binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 8, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029990)
HIX0029990
HIT000565273 (
ENST00000460342
)
(Alkyldihydroxyacetonephosphate synthase, peroxisomal; Alkyl-DHAP synthase; EC=2.5.1.26; Aging-associated gene 5 protein; Alkylglycerone-phosphate synthase; Precursor;)
genome : 178,301,712 - 178,306,197 (4,486)
query : 1 - 576 (576/576)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.26
KEGG pathway :
00565 : Ether lipid metabolism (23)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 7.5, cyto_plas 4.5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029990)
HIX0029990
HIT000026287
(
AL359559
)
(Hypothetical short protein.)
genome : 178,405,141 - 178,406,782 (1,642)
query : 1 - 1,643 (1,643/1,659)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, mito 6, plas 4, E.R._mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029990)
HIX0029990
HIT000306686
(
CR749699
)
(Hypothetical short protein.)
genome : 178,405,141 - 178,406,782 (1,642)
query : 1 - 1,643 (1,643/1,659)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, mito 6, plas 4, E.R._mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029990)
HIX0002624
HIT000213783 (
NM_152517
)
(Tetratricopeptide repeat protein 30B; TPR repeat protein 30B;)
genome : 178,414,882 - 178,417,524 (2,643)
query : 1 - 2,643 (2,643/2,652)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13.5, nucl 6.5, mito 2.5,
mito_pero 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002624)
HIX0002624
HIT000491452
(
AK296828
)
Representative transcript
(Tetratricopeptide repeat protein 30B.)
genome : 178,414,890 - 178,417,500 (2,611)
query : 1 - 2,469 (2,469/2,469)
2 exons
identity = 0.998
3'(0.999;0.979)5'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR013105 : Tetratricopeptide TPR2
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13, nucl 6.5, extr 2, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002624)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK011097
Bos
sp. (Cow) : BC146102
Gallus
sp. (Chicken) : CR733219
Danio
sp. (Zebrafish) : EF653429
Oryzias
sp. (Medaka) : ENSORLT00000000415
Pongo
sp. (Orangutan) : ENSPPYT00000015076
Takifugu
sp. (Fugu) : SINFRUT00000183025
Macaca
sp. (Macaque) : XM_001096744
Pan
sp. (Chimpanzee) : XM_001154320
Canis
sp. (Dog) : XM_847647
Rattus
sp. (Rat) : XR_005475
HIX0002624
HIT000506979 (
ENST00000408939
)
(Tetratricopeptide repeat protein 30B; TPR repeat protein 30B;)
genome : 178,414,973 - 178,417,742 (2,770)
query : 1 - 2,770 (2,770/2,770)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13.5, nucl 6.5, mito 2.5,
mito_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002624)
HIX0002624
HIT000056267
(
BX647620
)
(Tetratricopeptide repeat protein 30B.)
genome : 178,415,252 - 178,417,057 (1,806)
query : 1 - 1,806 (1,806/1,836)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.999
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11.5, nucl 7.5,
E.R._mito 2.66667, E.R. 2.5, mito_pero 2.33333, E.R._golg 2.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002624)
HIX0002624
HIT000012166
(
AK055552
)
(Tetratricopeptide repeat protein 30B.)
genome : 178,415,235 - 178,417,504 (2,270)
query : 1 - 2,189 (2,189/2,189)
2 exons
identity = 0.996
3'(0.999;0.986)5'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR013105 : Tetratricopeptide TPR2
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, nucl 5.5, mito 2.5,
mito_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002624)
HIX0002624
HIT000041960
(
BC033795
)
(Tetratricopeptide repeat protein 30B; TPR repeat protein 30B;)
genome : 178,415,376 - 178,417,508 (2,133)
query : 1 - 2,133 (2,133/2,211)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR013105 : Tetratricopeptide TPR2
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13.5, nucl 6.5, mito 2.5,
mito_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002624)
HIX0161924
HIT000310951 (
ENST00000357045
)
(Conserved hypothetical protein.)
genome : 178,467,817 - 178,483,300 (15,484)
query : 1 - 590 (590/590)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161924)
HIX0002625
HIT000089363
(
BC017695
)
(Tetratricopeptide repeat protein 30A.)
genome : 178,479,031 - 178,482,873 (3,843)
query : 1 - 3,841 (3,841/3,871)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 11, nucl 5.5, E.R. 5.5,
E.R._mito 4, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002625)
HIX0002625
HIT000213551 (
NM_152275
)
(Tetratricopeptide repeat protein 30A.)
genome : 178,479,026 - 178,483,694 (4,669)
query : 1 - 4,669 (4,669/4,686)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, nucl 7.5, extr 3, E.R. 2,
mito_pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002625)
HIX0002625
HIT000023752
(
AL049329
)
(Tetratricopeptide repeat protein 30A.)
genome : 178,479,026 - 178,481,792 (2,767)
query : 4 - 2,768 (2,765/2,784)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, extr 11, cyto_nucl 10.3333,
cyto_plas 6.83333, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002625)
HIX0002625
HIT000309796 (
ENST00000355689
)
(Tetratricopeptide repeat protein 30A.)
genome : 178,479,026 - 178,483,694 (4,669)
query : 1 - 4,669 (4,669/4,669)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, nucl 7.5, extr 3, E.R. 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002625)
HIX0002625
HIT000044977
(
AK125104
)
Representative transcript
(Tetratricopeptide-like helical domain containing protein.)
genome : 178,480,187 - 178,483,447 (3,261)
query : 1 - 3,212 (3,212/3,212)
2 exons
identity = 0.998
3'(0.999;0.987)5'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_mito 10.3333, mito 10, cyto 9.5,
E.R._mito 6.33333, pero 6, extr 2, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002625)
HIX0002625
HIT000052745
(
BC042848
)
(Tetratricopeptide repeat protein 30A.)
genome : 178,480,242 - 178,483,694 (3,453)
query : 5 - 3,454 (3,450/3,470)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.999
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR013105 : Tetratricopeptide TPR2
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, nucl 7.5, extr 3, E.R. 2,
mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002625)
HIX0002625
HIT000007282
(
AK024008
)
(Tetratricopeptide repeat protein 30A.)
genome : 178,480,731 - 178,482,514 (1,784)
query : 1 - 1,784 (1,784/1,784)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, plas 12, cyto_nucl 8, mito_pero 2.5,
mito 2, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002625)
HIX0002625
HIT000098861
(
BC048006
)
(Tetratricopeptide repeat protein 30A.)
genome : 178,480,981 - 178,483,468 (2,488)
query : 1 - 2,488 (2,488/2,503)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR013105 : Tetratricopeptide TPR2
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, nucl 7.5, extr 3, E.R. 2,
mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002625)
HIX0002625
HIT000014144
(
AK057530
)
(Tetratricopeptide repeat protein 30A.)
genome : 178,480,982 - 178,483,442 (2,461)
query : 1 - 2,350 (2,350/2,350)
2 exons
identity = 0.996
3'(0.998;0.961)5'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12, nucl 6.5, extr 3, E.R. 2,
mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002625)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB179006
Rattus
sp. (Rat) : BC098051
Bos
sp. (Cow) : BC133566
Danio
sp. (Zebrafish) : EF653429
Mus
sp. (Mouse) : ENSMUST00000099995
Oryzias
sp. (Medaka) : ENSORLT00000000415
Pan
sp. (Chimpanzee) : XM_001154497
Monodelphis
sp. (Opossum) : XM_001368657
Equus
sp. (Horse) : XM_001917337
Canis
sp. (Dog) : XM_847660
HIX0002625
HIT000425192
(
AK292395
)
(Tetratricopeptide repeat protein 30A.)
genome : 178,481,099 - 178,483,678 (2,580)
query : 1 - 2,580 (2,580/2,580)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR013105 : Tetratricopeptide TPR2
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, nucl 7.5, extr 3, E.R. 2,
mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002625)
HIX0214926
HIT000047067
(
AK127194
)
Representative transcript
(Conserved hypothetical protein.)
genome : 178,487,979 - 178,491,033 (3,055)
query : 1 - 3,056 (3,056/3,056)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 7.5, cyto_nucl 5, mito 2, E.R. 2,
E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214926)
HIX0214783
HIT000488700
(
AK294076
)
Representative transcript
(3'5'-cyclic nucleotide phosphodiesterase family protein.)
genome : 178,493,340 - 178,540,388 (47,049)
query : 1 - 1,207 (1,207/1,207)
5 exons
identity = 0.990
3'(0.993;0.988;1.000;0.941;1.000)5'
coverage = 1.000
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
GO :
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 9, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214783)
HIX0214783
HIT000534634 (
ENST00000436700
)
(3'5'-cyclic nucleotide phosphodiesterase family protein.)
genome : 178,493,340 - 178,540,388 (47,049)
query : 1 - 1,204 (1,204/1,204)
5 exons
identity = 0.997
3'(1.000;1.000;1.000;0.941;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 5, mito 5, mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214783)
HIX0214783
HIT000548733 (
ENST00000450799
)
(3'5'-cyclic nucleotide phosphodiesterase family protein.)
genome : 178,493,340 - 178,540,388 (47,049)
query : 1 - 1,204 (1,204/1,204)
5 exons
identity = 0.997
3'(1.000;1.000;1.000;0.941;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 5, mito 5, mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214783)
HIX0214783
HIT000582743 (
ENST00000478646
)
(3'5'-cyclic nucleotide phosphodiesterase, catalytic domain containing protein.)
genome : 178,493,903 - 178,540,280 (46,378)
query : 1 - 570 (570/570)
3 exons
identity = 0.993
3'(1.000;1.000;0.961)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 5, extr 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214783)
HIX0214783
HIT000592050 (
ENST00000488399
)
(3'5'-cyclic nucleotide phosphodiesterase family protein.)
genome : 178,494,151 - 178,540,822 (46,672)
query : 1 - 540 (540/540)
5 exons
identity = 0.993
3'(1.000;1.000;1.000;0.941;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, mito 7, nucl 4, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214783)
HIX0214783
HIT000571420 (
ENST00000466790
)
(Conserved hypothetical protein.)
genome : 178,534,259 - 178,548,198 (13,940)
query : 1 - 423 (423/423)
5 exons
identity = 0.991
3'(1.000;0.941;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 10, cyto_nucl 9, mito 6, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214783)
HIX0161695
HIT000510067 (
ENST00000412133
)
(Conserved hypothetical protein.)
genome : 178,563,157 - 178,588,017 (24,861)
query : 1 - 741 (741/741)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 12, extr 8, cyto 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161695)
HIX0161695
HIT000548161 (
ENST00000450227
)
(Hypothetical protein.)
genome : 178,563,218 - 178,588,017 (24,800)
query : 1 - 545 (545/545)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161695)
HIX0215216
HIT000530730 (
ENST00000432796
)
(Conserved hypothetical protein.)
genome : 177,001,685 - 177,034,143 (32,459)
query : 1 - 428 (428/428)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 11.5, nucl 9.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215216)
HIX0215216
HIT000572987 (
ENST00000468418
)
(Domain of unknown function DUF4074 domain containing protein.)
genome : 177,015,122 - 177,037,830 (22,709)
query : 1 - 4,217 (4,217/4,217)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215216)
HIX0215178
HIT000056054
(
BX647407
)
Representative transcript
(Basic leucine zipper domain, Maf-type containing protein.)
genome : 178,095,038 - 178,257,425 (162,388)
query : 34 - 2,781 (2,748/2,799)
8 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;0.993;1.000;
0.984)5'
coverage = 0.988
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215178)
HIX0215178
HIT000569476 (
ENST00000464747
)
(Basic leucine zipper domain, Maf-type containing protein.)
genome : 178,095,036 - 178,257,425 (162,390)
query : 1 - 2,749 (2,749/2,749)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215178)
HIX0215178
HIT000698378 (
ENST00000586532
)
(Conserved hypothetical protein.)
genome : 178,096,533 - 178,176,005 (79,473)
query : 1 - 870 (870/870)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 17.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215178)
HIX0215178
HIT000699964 (
ENST00000588123
)
(Conserved hypothetical protein.)
genome : 178,097,227 - 178,152,505 (55,279)
query : 1 - 814 (814/814)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11.5, extr 5, cysk 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215178)
HIX0002626
HIT000397754 (
NM_001077197
)
(Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform 3.)
genome : 178,487,972 - 178,973,066 (485,095)
query : 1 - 8,314 (8,314/8,316)
21 exons
identity = 0.999
3'(1.000;1.000;1.000;0.941;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
,
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, cyto_mito 10.3333, nucl 6.5,
cyto_nucl 5.83333, cyto 4, plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002626)
HIX0002626
HIT000206370 (
NM_016953
)
(Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A; EC=3.1.4.17; EC=3.1.4.35; cAMP and cGMP phosphodiesterase 11A;)
genome : 178,487,972 - 178,937,482 (449,511)
query : 1 - 9,283 (9,283/9,285)
20 exons
identity = 0.999
3'(1.000;1.000;1.000;0.941;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
,
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 26, cyto 2, mito 2, E.R. 2, E.R._mito 2,
cyto_mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002626)
HIX0002626
HIT000397753 (
NM_001077196
)
(Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform 1.)
genome : 178,487,972 - 178,753,466 (265,495)
query : 1 - 7,784 (7,784/7,786)
17 exons
identity = 0.999
3'(1.000;1.000;1.000;0.941;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
,
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.3333, cyto_mito 8.83333,
nucl 5.5, plas 4.5, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002626)
HIX0002626
HIT000059220
(
AB038041
)
(Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform 3.)
genome : 178,492,811 - 178,973,066 (480,256)
query : 1 - 3,478 (3,478/3,507)
21 exons
identity = 0.996
3'(0.994;1.000;1.000;0.941;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16.5, cyto_mito 10.5, nucl 6, cyto 3.5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002626)
HIX0002626
HIT000059169
(
AB036704
)
(Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A; EC=3.1.4.17; EC=3.1.4.35; cAMP and cGMP phosphodiesterase 11A;)
genome : 178,492,811 - 178,937,482 (444,672)
query : 1 - 4,447 (4,447/4,476)
20 exons
identity = 0.997
3'(0.994;1.000;1.000;0.941;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
,
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 26, cyto 2, mito 2, E.R. 2, E.R._mito 2,
cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002626)
HIX0002626
HIT000312153 (
ENST00000358450
)
(Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform 3.)
genome : 178,492,797 - 178,973,066 (480,270)
query : 1 - 3,489 (3,489/3,489)
21 exons
identity = 0.999
3'(1.000;1.000;1.000;0.941;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, cyto_mito 10.3333, nucl 6.5,
cyto_nucl 5.83333, cyto 4, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002626)
HIX0002626
HIT000112675 (
ENST00000286063
)
(Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A; EC=3.1.4.17; EC=3.1.4.35; cAMP and cGMP phosphodiesterase 11A;)
genome : 178,492,797 - 178,937,482 (444,686)
query : 1 - 4,458 (4,458/4,458)
20 exons
identity = 0.999
3'(1.000;1.000;1.000;0.941;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
,
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 26, cyto 2, mito 2, E.R. 2, E.R._mito 2,
cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002626)
HIX0002626
HIT000015053
(
AK074273
)
(Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A; EC=3.1.4.17; EC=3.1.4.35; cAMP and cGMP phosphodiesterase 11A;)
genome : 178,493,138 - 178,592,902 (99,765)
query : 2 - 2,018 (2,017/2,083)
10 exons
identity = 0.992
3'(0.991;1.000;1.000;0.941;0.987;1.000;0.989;
1.000;1.000;1.000)5'
coverage = 0.989
EC number :
EC 3.1.4.17
,
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
E.R. 7.5, E.R._mito 7.33333, cyto 6, mito_pero 5,
pero 4.5, extr 4, nucl 4, mito 4, cyto_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002626)
HIX0002626
HIT000386667
(
BC112393
)
(Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A; EC=3.1.4.17; EC=3.1.4.35; cAMP and cGMP phosphodiesterase 11A;)
genome : 178,493,708 - 178,937,473 (443,766)
query : 1 - 3,541 (3,541/3,541)
20 exons
identity = 0.996
3'(0.988;1.000;1.000;0.941;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
,
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 26, cyto 2, mito 2, E.R. 2, E.R._mito 2,
cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002626)
HIX0002626
HIT000387251
(
BC114431
)
(Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A; EC=3.1.4.17; EC=3.1.4.35; cAMP and cGMP phosphodiesterase 11A;)
genome : 178,493,708 - 178,937,473 (443,766)
query : 1 - 3,541 (3,541/3,541)
20 exons
identity = 0.996
3'(0.988;1.000;1.000;0.941;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
,
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 26, cyto 2, mito 2, E.R. 2, E.R._mito 2,
cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002626)
HIX0002626
HIT000246457
(
AJ278682
)
Representative transcript
(Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform 3.)
genome : 178,493,775 - 178,973,081 (479,307)
query : 29 - 2,479 (2,451/2,502)
22 exons
identity = 0.994
3'(0.982;0.982;1.000;1.000;0.941;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.988
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16.5, cyto_mito 10.5, nucl 6, cyto 3.5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002626)
HIX0002626
HIT000076130
(
AF281865
)
(Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform 1.)
genome : 178,493,775 - 178,787,523 (293,749)
query : 14 - 2,118 (2,105/2,141)
20 exons
identity = 0.996
3'(0.993;0.982;1.000;1.000;0.941;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.993
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 8, E.R._mito 6.83333, cyto_pero 6.83333,
cyto_mito 6.66667, mito 6, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002626)
HIX0002626
HIT000507536 (
ENST00000409504
)
(Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform 2.)
genome : 178,493,775 - 178,787,522 (293,748)
query : 1 - 2,102 (2,102/2,102)
20 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.941;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 9, cyto_mito 7.16667, E.R._mito 6.83333,
cyto 6.5, mito 6, plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002626)
HIX0002626
HIT000246010
(
AJ251509
)
(Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform 1.)
genome : 178,493,974 - 178,753,465 (259,492)
query : 1 - 1,784 (1,784/1,784)
17 exons
identity = 0.996
3'(0.988;1.000;1.000;0.941;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.8333, cyto_mito 8.83333,
nucl 6.5, plas 4.5, pero 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002626)
HIX0002626
HIT000396590 (
ENST00000389683
)
(Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform 1.)
genome : 178,493,974 - 178,753,465 (259,492)
query : 1 - 1,781 (1,781/1,781)
17 exons
identity = 0.998
3'(1.000;1.000;1.000;0.941;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.3333, cyto_mito 8.83333,
nucl 5.5, plas 4.5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002626)
HIX0002626
HIT000397777 (
NM_001077358
)
(Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform 2.)
genome : 178,494,127 - 178,787,564 (293,438)
query : 1 - 1,869 (1,869/1,869)
19 exons
identity = 0.998
3'(1.000;1.000;1.000;0.941;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
,
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 9, cyto_mito 7.16667, E.R._mito 6.83333,
cyto 6.5, mito 6, plas 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002626)
HIX0002626
HIT000547220 (
ENST00000449286
)
(Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform 2.)
genome : 178,494,127 - 178,787,564 (293,438)
query : 1 - 1,869 (1,869/1,869)
19 exons
identity = 0.998
3'(1.000;1.000;1.000;0.941;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 9, cyto_mito 7.16667, E.R._mito 6.83333,
cyto 6.5, mito 6, plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002626)
HIX0002626
HIT000650063
(
HM771389
)
(Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A; EC=3.1.4.17; EC=3.1.4.35; cAMP and cGMP phosphodiesterase 11A;)
genome : 178,494,135 - 178,937,164 (443,030)
query : 1 - 2,802 (2,802/2,802)
20 exons
identity = 0.998
3'(1.000;1.000;1.000;0.941;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
,
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, E.R. 7.5, cyto_nucl 7.5, E.R._mito 6.83333,
nucl 5, cyto_golg 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002626)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB059361
Mus
sp. (Mouse) : AK042383
Bos
sp. (Cow) : BC102714
Tetraodon
sp. (Tetraodon) : CR677377
Oryzias
sp. (Medaka) : ENSORLT00000009688
Pongo
sp. (Orangutan) : ENSPPYT00000015079
Takifugu
sp. (Fugu) : SINFRUT00000131816
Macaca
sp. (Macaque) : XM_001097592
Pan
sp. (Chimpanzee) : XM_001154673
Monodelphis
sp. (Opossum) : XM_001377248
Equus
sp. (Horse) : XM_001500621
Canis
sp. (Dog) : XM_545544
Danio
sp. (Zebrafish) : XM_684746
HIX0002626
HIT000650064
(
HM771390
)
(Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A; EC=3.1.4.17; EC=3.1.4.35; cAMP and cGMP phosphodiesterase 11A;)
genome : 178,494,135 - 178,937,164 (443,030)
query : 1 - 2,802 (2,802/2,802)
20 exons
identity = 0.998
3'(1.000;1.000;1.000;0.941;1.000;1.000;1.000;
1.000;0.991;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
,
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 26, cyto 2, mito 2, E.R. 2, E.R._mito 2,
cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002626)
HIX0002626
HIT000650065
(
HM771391
)
(Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A; EC=3.1.4.17; EC=3.1.4.35; cAMP and cGMP phosphodiesterase 11A;)
genome : 178,494,135 - 178,937,164 (443,030)
query : 1 - 2,802 (2,802/2,802)
20 exons
identity = 0.998
3'(1.000;1.000;0.987;0.941;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
,
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 26, cyto 2, mito 2, E.R. 2, E.R._mito 2,
cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002626)
HIX0002626
HIT000531813 (
ENST00000433879
)
(Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform 2.)
genome : 178,540,183 - 178,769,901 (229,719)
query : 1 - 1,310 (1,310/1,310)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_mito 9, E.R._mito 7.83333, pero 7,
mito 6.5, plas 3, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002626)
HIX0002626
HIT000057703
(
BX649056
)
(Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform 2.)
genome : 178,551,453 - 178,791,736 (240,284)
query : 2 - 2,984 (2,983/3,002)
15 exons
identity = 0.996
3'(0.993;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 8, E.R._mito 7.33333, cyto_mito 6.66667, mito 6,
cyto 5.5, plas 4, E.R. 3.5, extr_plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002626)
HIX0002626
HIT000600298 (
ENST00000497003
)
(Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform 2.)
genome : 178,551,453 - 178,791,736 (240,284)
query : 1 - 2,982 (2,982/3,000)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 8, E.R._mito 7.33333, cyto_mito 6.66667, mito 6,
cyto 5.5, plas 4, E.R. 3.5, extr_plas 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002626)
HIX0002617
pHIT000074267 ( pHIT000074267 )
(Homeobox protein Hox-D1; Homeobox protein Hox-GG;)
genome : 177,052,390 - 177,054,870 (2,481)
query : 1 - 585 (585/585)
3 exons
InterPro :
IPR017970 : Homeobox, conserved site
IPR020479 : Homeodomain, metazoa
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002617)
CAGE tag :
H05BC96B0608,H05BD40L1805,H06BA39I1204
H06BA71E1606,H06BA77E0805
HIX0180281
pHIT000005198 ( pHIT000005198 )
Representative transcript
(Conserved hypothetical protein.)
genome : 177,065,636 - 177,065,980 (345)
query : 1 - 345 (345/345)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0180281)
CAGE tag :
H05BC96B0608,H05BD40L1805,H06BA39I1204
H06BA71E1606,H06BA77E0805
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000015067
Macaca
sp. (Macaque) : XM_001094450
Pan
sp. (Chimpanzee) : XM_001153228
Bos
sp. (Cow) : XM_001251850
Monodelphis
sp. (Opossum) : XM_001373413
Equus
sp. (Horse) : XM_001493433
AC009336.13
177000001-177056400 F +
NCBI
AC016739.5
177056401-177144763 F -
NCBI
AC073069.6
177144764-177228550 F +
NCBI
AC068706.6
177228551-177350696 F +
NCBI
AC017048.6
177350697-177535075 F +
NCBI
AC079803.2
177535076-177543923 F +
NCBI
AC092162.3
177543924-177696934 F +
NCBI
AC073636.4
177696935-177845952 F +
NCBI
AC074286.5
177845953-177969018 F +
NCBI
AC096657.1
177969019-177970627 F +
NCBI
AC079305.6
177970628-178153130 F +
NCBI
AC019080.6
178153131-178330746 F +
NCBI
AC016762.5
178330747-178371632 F +
NCBI
AC073834.6
178371633-178543847 F +
NCBI
AC083824.5
178543848-178545615 F +
NCBI
AC012499.8
178545616-178600000 F +
NCBI