bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0024034
HIT000530076_01 (
ENST00000432142
)
genome : 19,203,707 - 19,505,815 (302,109)
query : 1 - 571 (571/571)
5 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024034)
HIX0024034
HIT000516099 (
ENST00000418165
)
genome : 19,226,415 - 19,505,798 (279,384)
query : 1 - 553 (553/553)
5 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024034)
HIX0024034
HIT000547058 (
ENST00000449124
)
genome : 19,244,622 - 19,546,509 (301,888)
query : 1 - 626 (626/626)
5 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024034)
HIX0214900
HIT000696116 (
ENST00000584244
)
genome : 19,548,190 - 19,548,266 (77)
query : 1 - 77 (77/77)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214900)
HIX0214900
HIT000725977 (
NR_039914
)
genome : 19,548,190 - 19,548,266 (77)
query : 1 - 77 (77/77)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214900)
HIX0001851
HIT000039978
(
BC025712
)
genome : 19,551,246 - 19,558,372 (7,127)
query : 1 - 1,891 (1,891/1,915)
3 exons
identity = 0.997
3'(0.995;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001851)
HIX0001851
HIT000213166 (
NM_145260
)
genome : 19,551,246 - 19,558,372 (7,127)
query : 1 - 1,894 (1,894/1,911)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001851)
HIX0001851
HIT000110853 (
ENST00000272223
)
genome : 19,551,246 - 19,558,414 (7,169)
query : 1 - 1,936 (1,936/1,936)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001851)
HIX0001851
HIT000081626
(
AK074591
)
genome : 19,551,247 - 19,558,384 (7,138)
query : 1 - 1,905 (1,905/1,905)
3 exons
identity = 0.998
3'(0.997;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001851)
HIX0001851
HIT000061389
(
AB082568
)
genome : 19,551,635 - 19,553,570 (1,936)
query : 1 - 1,206 (1,206/1,206)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001851)
HIX0001851
HIT000042629
(
AK122756
)
genome : 19,551,773 - 19,556,673 (4,901)
query : 26 - 4,195 (4,170/4,195)
2 exons
identity = 0.999
3'(1.000;0.999)5'
coverage = 0.994
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001851)
HIX0001851
HIT000635478 (
ENST00000536433
)
genome : 19,551,773 - 19,556,677 (4,905)
query : 1 - 4,175 (4,175/4,175)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001851)
HIX0001851
HIT000591279 (
ENST00000487581
)
genome : 19,551,773 - 19,556,673 (4,901)
query : 1 - 4,171 (4,171/4,171)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001851)
HIX0001851
HIT000602049 (
ENST00000498844
)
genome : 19,557,467 - 19,558,384 (918)
query : 1 - 581 (581/581)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001851)
HIX0030372
HIT000097683
(
BC043433
)
genome : 19,657,981 - 19,668,722 (10,742)
query : 1 - 1,709 (1,709/1,723)
2 exons
identity = 0.999
3'(0.998;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030372)
HIX0030372
HIT000541831 (
ENST00000443897
)
genome : 19,657,981 - 19,668,722 (10,742)
query : 1 - 1,709 (1,709/1,709)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030372)
HIX0001852
HIT000548562 (
ENST00000450628
)
genome : 19,675,211 - 19,688,611 (13,401)
query : 1 - 754 (754/754)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001852)
HIX0001852
HIT000024739
(
AL117577
)
genome : 19,687,955 - 19,689,086 (1,132)
query : 1 - 1,132 (1,132/1,154)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001852)
HIX0204060
HIT000454001_08
(
DQ587470
)
genome : 19,795,443 - 19,795,472 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204060)
HIX0162684
HIT000530756 (
ENST00000432822
)
genome : 19,911,476 - 19,917,337 (5,862)
query : 1 - 443 (443/443)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162684)
HIX0121702
HIT000477335 (
ENST00000393907
)
genome : 20,026,010 - 20,026,336 (327)
query : 1 - 327 (327/327)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0121702)
HIX0017563
HIT000659033 (
NR_033875
)
genome : 20,068,615 - 20,084,808 (16,194)
query : 1 - 3,015 (3,015/3,030)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017563)
HIX0017563
HIT000005670
(
AK022396
)
genome : 20,068,621 - 20,077,154 (8,534)
query : 1 - 2,235 (2,235/2,235)
5 exons
identity = 0.996
5'(1.000;1.000;0.995;1.000;0.995)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017563)
HIX0017563
HIT000536626 (
ENST00000438692
)
genome : 20,068,621 - 20,077,154 (8,534)
query : 1 - 2,239 (2,239/2,239)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017563)
HIX0017563
HIT000263128
(
BC068572
)
genome : 20,068,635 - 20,084,808 (16,174)
query : 1 - 2,990 (2,990/3,005)
10 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.997;
1.000;0.967;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017563)
HIX0017563
HIT000547020 (
ENST00000449086
)
genome : 20,068,635 - 20,084,808 (16,174)
query : 1 - 2,995 (2,995/2,995)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017563)
HIX0017563
HIT000022781
(
AK097927
)
genome : 20,068,652 - 20,077,296 (8,645)
query : 3 - 2,476 (2,474/2,476)
6 exons
identity = 0.998
5'(1.000;0.992;1.000;1.000;1.000;0.997)3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017563)
HIX0017563
HIT000531603 (
ENST00000433669
)
genome : 20,068,652 - 20,077,296 (8,645)
query : 1 - 2,472 (2,472/2,472)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017563)
HIX0017563
HIT000554053 (
ENST00000456119
)
genome : 20,068,652 - 20,072,291 (3,640)
query : 1 - 522 (522/522)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017563)
HIX0029961
HIT000504111 (
ENST00000402414
)
genome : 20,096,404 - 20,101,717 (5,314)
query : 1 - 735 (735/735)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029961)
HIX0029961
HIT000264336
(
BC070381
)
genome : 20,096,521 - 20,101,618 (5,098)
query : 1 - 686 (686/716)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029961)
HIX0029961
HIT000099119
(
BC050088
)
genome : 20,096,512 - 20,101,427 (4,916)
query : 1 - 4,174 (4,174/4,189)
2 exons
identity = 1.000
3'(0.997;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029961)
HIX0029961
HIT000259786
(
BC057850
)
genome : 20,096,514 - 20,101,747 (5,234)
query : 1 - 822 (822/838)
3 exons
identity = 0.998
3'(0.997;1.000;0.996)5'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029961)
HIX0029961
HIT000316499 (
NM_001008237
)
genome : 20,096,514 - 20,101,747 (5,234)
query : 1 - 822 (822/838)
3 exons
identity = 0.998
3'(0.997;1.000;0.996)5'
coverage = 0.999
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029961)
HIX0029961
HIT000128449 (
ENST00000333610
)
genome : 20,096,514 - 20,101,747 (5,234)
query : 1 - 822 (822/822)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029961)
HIX0029961
HIT000599057 (
ENST00000495698
)
genome : 20,096,787 - 20,098,238 (1,452)
query : 1 - 710 (710/710)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029961)
HIX0029961
HIT000529326 (
ENST00000431392
)
genome : 20,097,630 - 20,101,402 (3,773)
query : 1 - 779 (779/779)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029961)
HIX0200248
HIT000208062 (
NM_020779
)
genome : 20,110,030 - 20,189,884 (79,855)
query : 1 - 6,910 (6,910/6,924)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200248)
HIX0200248
HIT000316328 (
NM_001006657
)
genome : 20,110,030 - 20,189,884 (79,855)
query : 1 - 6,943 (6,943/6,957)
28 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200248)
HIX0200248
HIT000093284
(
BC033951
)
genome : 20,110,030 - 20,111,058 (1,029)
query : 6 - 1,035 (1,030/1,049)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 0.995
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200248)
HIX0200248
HIT000307168 (
ENST00000345530
)
genome : 20,110,021 - 20,189,892 (79,872)
query : 1 - 6,960 (6,960/6,960)
28 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200248)
HIX0200248
HIT000112084 (
ENST00000281405
)
genome : 20,110,021 - 20,189,883 (79,863)
query : 1 - 6,918 (6,918/6,918)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200248)
HIX0200248
HIT000001051
(
AB037757
)
genome : 20,110,031 - 20,189,892 (79,862)
query : 1 - 6,950 (6,950/6,950)
28 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200248)
HIX0200248
HIT000006140
(
AK022866
)
genome : 20,110,031 - 20,112,567 (2,537)
query : 1 - 2,537 (2,537/2,537)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200248)
HIX0200248
HIT000051757
(
BC036659
)
genome : 20,113,002 - 20,189,883 (76,882)
query : 1 - 3,937 (3,937/3,952)
27 exons
identity = 0.999
3'(0.996;0.996;1.000;1.000;1.000;0.991;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.992)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200248)
HIX0200248
HIT000016072
(
AK091205
)
genome : 20,113,003 - 20,175,397 (62,395)
query : 1 - 2,788 (2,788/2,788)
18 exons
identity = 0.999
3'(0.998;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.991)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200248)
HIX0200248
HIT000513989 (
ENST00000416055
)
genome : 20,113,003 - 20,175,397 (62,395)
query : 1 - 2,788 (2,788/2,788)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200248)
HIX0200248
HIT000542997 (
ENST00000445063
)
genome : 20,113,003 - 20,175,397 (62,395)
query : 1 - 2,788 (2,788/2,788)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200248)
HIX0200248
HIT000042790
(
AK122917
)
genome : 20,113,005 - 20,189,809 (76,805)
query : 1 - 3,860 (3,860/3,860)
27 exons
identity = 0.999
3'(0.998;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.986;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200248)
HIX0200248
HIT000433960
(
AK315094
)
genome : 20,113,319 - 20,189,809 (76,491)
query : 1 - 3,450 (3,450/3,450)
27 exons
identity = 0.999
3'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.984;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200248)
HIX0200248
HIT000512146 (
ENST00000414212
)
genome : 20,113,319 - 20,189,809 (76,491)
query : 1 - 3,483 (3,483/3,483)
28 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200248)
HIX0200248
HIT000027815
(
AL832903
)
genome : 20,134,796 - 20,153,632 (18,837)
query : 1 - 1,621 (1,621/1,649)
10 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.986;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200248)
HIX0200248
HIT000550948 (
ENST00000453014
)
genome : 20,134,793 - 20,153,632 (18,840)
query : 1 - 1,624 (1,624/1,624)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200248)
HIX0200248
HIT000598346 (
ENST00000494964
)
genome : 20,147,933 - 20,151,682 (3,750)
query : 1 - 553 (553/553)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200248)
HIX0162305
HIT000514509 (
ENST00000416575
)
genome : 20,189,978 - 20,203,971 (13,994)
query : 1 - 541 (541/541)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162305)
HIX0200356
HIT000199278 (
NM_002381
)
genome : 20,191,813 - 20,212,455 (20,643)
query : 1 - 2,583 (2,583/2,600)
8 exons
identity = 0.997
3'(1.000;0.946;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200356)
HIX0200356
HIT000391229
(
BC139907
)
genome : 20,191,876 - 20,212,413 (20,538)
query : 1 - 2,478 (2,478/2,526)
8 exons
identity = 0.997
3'(1.000;0.946;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200356)
HIX0200356
HIT000505998 (
ENST00000407540
)
genome : 20,191,872 - 20,212,455 (20,584)
query : 1 - 2,524 (2,524/2,524)
8 exons
identity = 0.997
3'(1.000;0.946;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200356)
HIX0200356
HIT000244980
(
AJ224741
)
genome : 20,191,872 - 20,212,409 (20,538)
query : 1 - 2,478 (2,478/2,478)
8 exons
identity = 0.996
3'(0.999;0.946;1.000;1.000;1.000;1.000;0.996;
1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200356)
HIX0200356
HIT000325767
(
Y13341
)
genome : 20,192,109 - 20,205,767 (13,659)
query : 1 - 1,697 (1,697/1,713)
7 exons
identity = 0.996
3'(1.000;0.946;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200356)
HIX0200356
HIT000423653
(
AK290856
)
genome : 20,192,600 - 20,212,455 (19,856)
query : 1 - 1,796 (1,796/1,796)
8 exons
identity = 0.993
3'(0.994;0.946;0.992;0.992;1.000;1.000;0.996;
1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200356)
HIX0200356
HIT000243831
(
AJ001047
)
genome : 20,192,710 - 20,205,745 (13,036)
query : 1 - 1,074 (1,074/1,074)
7 exons
identity = 0.993
3'(1.000;0.946;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200356)
HIX0200356
HIT000485018
(
EU541440
)
genome : 20,192,798 - 20,212,426 (19,629)
query : 1 - 1,443 (1,443/1,443)
7 exons
identity = 0.994
3'(1.000;0.946;1.000;1.000;1.000;0.996;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200356)
HIX0200356
HIT000519193 (
ENST00000421259
)
genome : 20,192,798 - 20,212,426 (19,629)
query : 1 - 1,443 (1,443/1,443)
7 exons
identity = 0.995
3'(1.000;0.946;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200356)
HIX0200356
HIT000582586 (
ENST00000478482
)
genome : 20,194,098 - 20,197,614 (3,517)
query : 1 - 793 (793/793)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200356)
HIX0117883
HIT000440865
(
DQ574334
)
genome : 20,222,179 - 20,222,208 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117883)
HIX0001855
HIT000334566
(
BC093075
)
genome : 20,232,414 - 20,251,389 (18,976)
query : 1 - 1,362 (1,362/1,392)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001855)
HIX0001855
HIT000031475
(
BC003158
)
genome : 20,232,411 - 20,251,429 (19,019)
query : 1 - 1,405 (1,405/1,428)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.987;0.992;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001855)
HIX0001855
HIT000205019 (
NM_014713
)
genome : 20,232,411 - 20,251,789 (19,379)
query : 1 - 1,765 (1,765/1,783)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001855)
HIX0001855
HIT000253072
(
AY359028
)
genome : 20,232,413 - 20,251,405 (18,993)
query : 1 - 1,380 (1,380/1,395)
7 exons
identity = 0.999
3'(1.000;0.990;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001855)
HIX0001855
HIT000029607
(
BC000421
)
genome : 20,232,415 - 20,251,366 (18,952)
query : 1 - 1,338 (1,338/1,355)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001855)
HIX0001855
HIT000102547 (
ENST00000175091
)
genome : 20,232,411 - 20,251,789 (19,379)
query : 1 - 1,765 (1,765/1,765)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001855)
HIX0001855
HIT000042166
(
D14696
)
genome : 20,232,412 - 20,251,427 (19,016)
query : 1 - 1,402 (1,402/1,402)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001855)
HIX0001855
HIT000049146
(
AK129875
)
genome : 20,232,416 - 20,251,439 (19,024)
query : 1 - 1,410 (1,410/1,410)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001855)
HIX0001855
HIT000587021 (
ENST00000483117
)
genome : 20,232,930 - 20,235,004 (2,075)
query : 1 - 487 (487/487)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001855)
HIX0001855
HIT000267608
(
CR456758
)
genome : 20,232,970 - 20,251,281 (18,312)
query : 1 - 698 (698/702)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.992;1.000)5'
coverage = 0.994
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001855)
HIX0001855
HIT000499057
(
AK304433
)
genome : 20,236,547 - 20,251,387 (14,841)
query : 1 - 1,038 (1,038/1,038)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001855)
HIX0163158
HIT000550276 (
ENST00000452342
)
genome : 20,251,895 - 20,254,257 (2,363)
query : 1 - 573 (573/573)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163158)
HIX0162620
HIT000528363 (
ENST00000430429
)
genome : 20,263,617 - 20,306,590 (42,974)
query : 1 - 746 (746/746)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162620)
HIX0118975
HIT000534098 (
ENST00000436164
)
genome : 20,355,379 - 20,355,818 (440)
query : 1 - 440 (440/440)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0118975)
HIX0215097
HIT000693227 (
ENST00000581321
)
genome : 20,375,107 - 20,375,397 (291)
query : 1 - 291 (291/291)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215097)
HIX0203984
eHIT000014670 ( ESTsASS_2_771 )
genome : 20,382,137 - 20,384,343 (2,207)
query : 1 - 641 (641/641)
2 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203984)
ESTs used for assembly :
CB528940
HIX0001856
HIT000316350 (
NM_001006946
)
genome : 20,400,559 - 20,425,194 (24,636)
query : 1 - 3,292 (3,292/3,309)
6 exons
identity = 1.000
3'(1.000;1.000;0.998;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001856)
HIX0001856
HIT000199866 (
NM_002997
)
genome : 20,400,559 - 20,424,927 (24,369)
query : 1 - 3,200 (3,200/3,217)
5 exons
identity = 1.000
3'(1.000;1.000;0.998;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001856)
HIX0001856
HIT000106628 (
ENST00000254351
)
genome : 20,400,558 - 20,424,873 (24,316)
query : 1 - 3,147 (3,147/3,147)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001856)
HIX0001856
HIT000248611
(
AJ551176
)
genome : 20,400,559 - 20,424,873 (24,315)
query : 4 - 3,148 (3,145/3,148)
5 exons
identity = 0.999
3'(1.000;1.000;0.998;1.000;1.000)5'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001856)
HIX0001856
HIT000362428 (
ENST00000381150
)
genome : 20,400,560 - 20,425,194 (24,635)
query : 1 - 3,291 (3,291/3,291)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001856)
HIX0001856
HIT000033953
(
BC008765
)
genome : 20,401,257 - 20,424,871 (23,615)
query : 1 - 2,448 (2,448/2,475)
5 exons
identity = 0.998
3'(0.998;1.000;0.998;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001856)
HIX0001856
HIT000330519
(
AK222739
)
genome : 20,401,248 - 20,424,857 (23,610)
query : 2 - 1,523 (1,522/1,539)
4 exons
identity = 0.999
3'(1.000;0.997;1.000;1.000)5'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001856)
HIX0001856
HIT000504359 (
ENST00000403076
)
genome : 20,401,247 - 20,424,857 (23,611)
query : 1 - 1,523 (1,523/1,523)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001856)
HIX0001856
HIT000191329
(
J05392
)
genome : 20,401,258 - 20,424,834 (23,577)
query : 1 - 2,402 (2,402/2,402)
5 exons
identity = 0.996
3'(0.996;1.000;0.998;1.000;0.993)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001856)
HIX0001856
HIT000494009
(
AK299385
)
genome : 20,401,735 - 20,424,828 (23,094)
query : 1 - 1,586 (1,586/1,586)
5 exons
identity = 0.992
3'(0.996;0.882;0.998;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001856)
HIX0001856
HIT000430275
(
AK311409
)
genome : 20,401,774 - 20,424,891 (23,118)
query : 1 - 1,089 (1,089/1,089)
2 exons
identity = 0.986
3'(0.992;0.974)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001856)
HIX0001856
HIT000426179
(
AK307313
)
genome : 20,402,018 - 20,423,149 (21,132)
query : 1 - 1,100 (1,100/1,100)
4 exons
identity = 0.998
3'(0.998;0.997;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001856)
HIX0001856
HIT000586791 (
ENST00000482879
)
genome : 20,402,018 - 20,423,149 (21,132)
query : 1 - 1,100 (1,100/1,100)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001856)
HIX0001856
HIT000432840
(
AK313974
)
genome : 20,402,527 - 20,424,855 (22,329)
query : 1 - 1,159 (1,159/1,159)
5 exons
identity = 0.997
3'(1.000;0.993;0.998;1.000;0.997)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001856)
HIX0001856
HIT000322401
(
X60306
)
genome : 20,402,530 - 20,424,628 (22,099)
query : 1 - 930 (930/930)
5 exons
identity = 0.990
3'(0.970;1.000;0.996;1.000;0.970)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001856)
HIX0001856
HIT000526969 (
ENST00000429035
)
genome : 20,403,579 - 20,424,041 (20,463)
query : 1 - 646 (646/646)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001856)
HIX0001856
HIT000545058 (
ENST00000447124
)
genome : 20,403,913 - 20,424,855 (20,943)
query : 1 - 591 (591/591)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001856)
HIX0030190
HIT000250942
(
AY189285
)
genome : 20,425,035 - 20,427,748 (2,714)
query : 2 - 2,713 (2,712/2,730)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030190)
HIX0162842
HIT000536923 (
ENST00000438989
)
genome : 20,439,653 - 20,440,807 (1,155)
query : 1 - 1,155 (1,155/1,155)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162842)
HIX0162842
HIT000590330_01 (
ENST00000486584
)
genome : 20,440,419 - 20,440,862 (444)
query : 1 - 318 (318/318)
2 exons
identity = 0.953
3'(0.965;0.926)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162842)
HIX0001857
HIT000130761 (
ENST00000338086
)
genome : 20,448,452 - 20,527,144 (78,693)
query : 1 - 6,112 (6,112/6,112)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001857)
HIX0001857
HIT000077143
(
AF315591
)
genome : 20,448,453 - 20,527,144 (78,692)
query : 1 - 6,111 (6,111/6,111)
20 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001857)
HIX0001857
HIT000122194 (
ENST00000319801
)
genome : 20,448,453 - 20,527,144 (78,692)
query : 1 - 5,880 (5,880/5,880)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001857)
HIX0001857
HIT000205392 (
NM_015317
)
genome : 20,448,453 - 20,527,144 (78,692)
query : 1 - 6,111 (6,111/6,111)
20 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001857)
HIX0001857
HIT000314359 (
ENST00000361078
)
genome : 20,448,453 - 20,527,144 (78,692)
query : 1 - 6,117 (6,117/6,117)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001857)
HIX0001857
HIT000055701
(
BX641165
)
genome : 20,448,500 - 20,453,507 (5,008)
query : 1 - 5,008 (5,008/5,025)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001857)
HIX0001857
HIT000042377
(
D87078
)
genome : 20,448,501 - 20,527,121 (78,621)
query : 1 - 6,040 (6,040/6,040)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001857)
HIX0001857
HIT000075805
(
AF272350
)
genome : 20,449,625 - 20,512,017 (62,393)
query : 1 - 4,352 (4,352/4,397)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001857)
HIX0001857
HIT000039773
(
BC024218
)
genome : 20,449,625 - 20,478,569 (28,945)
query : 1 - 3,191 (3,191/3,210)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001857)
HIX0001857
HIT000538511 (
ENST00000440577
)
genome : 20,449,625 - 20,512,017 (62,393)
query : 1 - 4,352 (4,352/4,352)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001857)
HIX0001857
HIT000498822
(
AK304198
)
genome : 20,451,060 - 20,550,382 (99,323)
query : 1 - 3,414 (3,414/3,414)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.960)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001857)
HIX0001857
HIT000018713
(
AK093847
)
genome : 20,451,071 - 20,550,463 (99,393)
query : 1 - 3,595 (3,595/3,595)
21 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.991)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001857)
HIX0001857
HIT000504487 (
ENST00000403432
)
genome : 20,451,071 - 20,550,463 (99,393)
query : 1 - 3,594 (3,594/3,594)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001857)
HIX0001857
HIT000635462 (
ENST00000536417
)
genome : 20,451,071 - 20,550,382 (99,312)
query : 1 - 3,404 (3,404/3,404)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001857)
HIX0001857
HIT000340175
(
BC112046
)
genome : 20,451,311 - 20,527,147 (75,837)
query : 1 - 3,256 (3,256/3,256)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001857)
HIX0001857
HIT000340177
(
BC112048
)
genome : 20,451,311 - 20,527,147 (75,837)
query : 1 - 3,256 (3,256/3,256)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001857)
HIX0001857
HIT000502001
(
BC143550
)
genome : 20,451,311 - 20,527,147 (75,837)
query : 1 - 3,019 (3,019/3,019)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001857)
HIX0001857
HIT000502003
(
BC143552
)
genome : 20,451,319 - 20,527,147 (75,829)
query : 1 - 3,136 (3,136/3,136)
20 exons
identity = 1.000
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001857)
HIX0001857
HIT000540334 (
ENST00000442400
)
genome : 20,507,742 - 20,551,983 (44,242)
query : 1 - 955 (955/955)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001857)
HIX0001857
HIT000518168 (
ENST00000420234
)
genome : 20,508,175 - 20,550,595 (42,421)
query : 1 - 562 (562/562)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001857)
HIX0001857
HIT000527353 (
ENST00000429419
)
genome : 20,508,251 - 20,550,382 (42,132)
query : 1 - 547 (547/547)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001857)
HIX0001857
HIT000530039 (
ENST00000432105
)
genome : 20,511,401 - 20,551,995 (40,595)
query : 1 - 584 (584/584)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001857)
HIX0001857
HIT000544874 (
ENST00000446940
)
genome : 20,512,060 - 20,550,062 (38,003)
query : 1 - 525 (525/525)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001857)
HIX0001857
HIT000522044 (
ENST00000424110
)
genome : 20,518,354 - 20,550,463 (32,110)
query : 1 - 546 (546/546)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001857)
HIX0001859
HIT000004960
(
AK021686
)
genome : 20,544,865 - 20,547,106 (2,242)
query : 1 - 2,242 (2,242/2,242)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001859)
HIX0162472
HIT000521962 (
ENST00000424028
)
genome : 20,586,147 - 20,596,349 (10,203)
query : 1 - 1,363 (1,363/1,363)
6 exons
identity = 0.991
5'(1.000;0.899;0.993;0.975;1.000;0.991)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162472)
HIX0023937
HIT000431353
(
AK312487
)
genome : 20,646,833 - 20,647,817 (985)
query : 2 - 986 (985/986)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023937)
HIX0023937
HIT000492119
(
AK297495
)
genome : 20,646,835 - 20,648,165 (1,331)
query : 1 - 992 (992/992)
2 exons
identity = 0.994
5'(1.000;0.993)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023937)
HIX0023937
HIT000080908
(
AF498971
)
genome : 20,647,227 - 20,647,817 (591)
query : 1 - 591 (591/591)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023937)
HIX0023937
HIT000266547
(
BT019546
)
genome : 20,647,227 - 20,647,815 (589)
query : 1 - 589 (589/591)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.997
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023937)
HIX0023937
HIT000266548
(
BT019547
)
genome : 20,647,227 - 20,647,815 (589)
query : 1 - 589 (589/591)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.997
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023937)
HIX0023937
HIT000321220
(
X06820
)
genome : 20,647,227 - 20,647,817 (591)
query : 1 - 591 (591/591)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023937)
HIX0023937
HIT000269140
(
CR542272
)
genome : 20,647,227 - 20,647,814 (588)
query : 1 - 588 (588/588)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023937)
HIX0023937
HIT000194148
(
M12174
)
genome : 20,647,310 - 20,647,849 (540)
query : 1 - 539 (539/539)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023937)
HIX0214736
HIT000242764
(
AF171089
)
genome : 20,648,348 - 20,649,201 (854)
query : 1 - 857 (857/875)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214736)
HIX0214736
HIT000260672
(
BC062781
)
genome : 20,648,621 - 20,649,199 (579)
query : 4 - 579 (576/610)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 0.991
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214736)
HIX0163059
HIT000546175 (
ENST00000448241
)
genome : 20,650,803 - 20,652,708 (1,906)
query : 1 - 308 (308/308)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163059)
HIX0162908
HIT000539804 (
ENST00000441870
)
genome : 20,699,331 - 20,701,071 (1,741)
query : 1 - 686 (686/686)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162908)
HIX0181974
HIT000114567_02 (
ENST00000296597
)
genome : 20,729,156 - 20,729,856 (701)
query : 7 - 708 (702/708)
1 exon
identity = 0.970
3'(0.970)5'
coverage = 0.992
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0181974)
HIX0181974
HIT000602992_01 (
ENST00000502658
)
genome : 20,729,156 - 20,729,657 (502)
query : 1 - 461 (461/461)
2 exons
identity = 0.976
3'(0.978;0.971)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0181974)
HIX0181974
pHIT000003839 ( pHIT000003839 )
genome : 20,729,227 - 20,729,736 (510)
query : 1 - 510 (510/510)
1 exon
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0181974)
CAGE tag :
H05BC13K0410
HIX0215128
HIT000714469 (
ENST00000602736
)
genome : 20,786,008 - 20,786,446 (439)
query : 1 - 439 (439/439)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215128)
HIX0163088
HIT000547325 (
ENST00000449391
)
genome : 20,790,535 - 20,792,308 (1,774)
query : 1 - 600 (600/600)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163088)
HIX0214639
HIT000513198 (
ENST00000415264
)
genome : 20,792,377 - 20,824,533 (32,157)
query : 1 - 414 (414/414)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214639)
HIX0162414
HIT000519229 (
ENST00000421295
)
genome : 20,806,040 - 20,806,414 (375)
query : 1 - 375 (375/375)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162414)
HIX0030527
HIT000306089
(
CR627155
)
genome : 20,812,058 - 20,816,027 (3,970)
query : 1 - 3,970 (3,970/3,986)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030527)
HIX0030527
HIT000438994
(
DQ572463
)
genome : 20,814,513 - 20,814,542 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030527)
HIX0214639
HIT000043284
(
AK123411
)
genome : 20,821,948 - 20,824,653 (2,706)
query : 6 - 2,011 (2,006/2,011)
2 exons
identity = 0.997
3'(0.997;0.994)5'
coverage = 0.998
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214639)
HIX0214639
HIT000543036 (
ENST00000445102
)
genome : 20,821,948 - 20,824,652 (2,705)
query : 1 - 2,005 (2,005/2,005)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214639)
HIX0214633
HIT000259688
(
BC057389
)
genome : 20,834,478 - 20,850,838 (16,361)
query : 1 - 4,341 (4,341/4,355)
4 exons
identity = 0.994
3'(0.994;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214633)
HIX0214633
HIT000504158 (
ENST00000402541
)
genome : 20,834,476 - 20,850,838 (16,363)
query : 1 - 4,358 (4,358/4,358)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214633)
HIX0214633
HIT000040370
(
BC027947
)
genome : 20,836,483 - 20,850,846 (14,364)
query : 1 - 2,357 (2,357/2,382)
4 exons
identity = 0.997
3'(0.996;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214633)
HIX0214633
HIT000095407
(
BC038847
)
genome : 20,839,791 - 20,850,844 (11,054)
query : 9 - 1,377 (1,369/1,391)
3 exons
identity = 0.999
3'(1.000;1.000;0.981)5'
coverage = 0.994
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214633)
HIX0214633
HIT000505670 (
ENST00000406618
)
genome : 20,839,785 - 20,850,844 (11,060)
query : 1 - 1,375 (1,375/1,375)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214633)
HIX0029785
HIT000110854 (
ENST00000272224
)
genome : 20,866,424 - 20,873,418 (6,995)
query : 1 - 4,162 (4,162/4,162)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029785)
HIX0029785
HIT000243658
(
AF522369
)
genome : 20,866,424 - 20,871,250 (4,827)
query : 1 - 1,994 (1,994/1,994)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029785)
HIX0029785
HIT000318819 (
NM_182828
)
genome : 20,866,424 - 20,871,250 (4,827)
query : 1 - 1,994 (1,994/1,994)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029785)
HIX0029785
HIT000242445
(
AB158468
)
genome : 20,866,951 - 20,871,230 (4,280)
query : 1 - 1,456 (1,456/1,456)
2 exons
identity = 0.992
5'(0.980;0.998)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029785)
HIX0030673
HIT000678900 (
ENST00000565841
)
genome : 20,877,569 - 20,879,005 (1,437)
query : 1 - 1,437 (1,437/1,437)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030673)
HIX0030673
HIT000222641
(
U92981
)
genome : 20,877,569 - 20,878,997 (1,429)
query : 1 - 1,429 (1,429/1,429)
1 exon
identity = 0.989
3'(0.989)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030673)
HIX0030673
HIT000714178 (
ENST00000602445
)
genome : 20,878,014 - 20,878,692 (679)
query : 1 - 679 (679/679)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030673)
HIX0001861
HIT000504335 (
ENST00000403006
)
genome : 20,883,788 - 21,022,864 (139,077)
query : 1 - 1,895 (1,895/1,895)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001861)
HIX0001861
HIT000362368 (
ENST00000381090
)
genome : 20,883,804 - 21,022,874 (139,071)
query : 1 - 2,045 (2,045/2,045)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001861)
HIX0001861
HIT000004946
(
AK021672
)
genome : 20,884,172 - 20,901,413 (17,242)
query : 21 - 2,116 (2,096/2,116)
3 exons
identity = 0.999
3'(0.994;1.000;1.000)5'
coverage = 0.991
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001861)
HIX0001861
HIT000574589 (
ENST00000470099
)
genome : 20,884,172 - 20,901,413 (17,242)
query : 21 - 2,116 (2,096/2,116)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.991
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001861)
HIX0001861
HIT000008747
(
AK025473
)
genome : 20,884,818 - 21,022,827 (138,010)
query : 2 - 2,857 (2,856/2,877)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001861)
HIX0001861
HIT000208472 (
NM_021925
)
genome : 20,884,818 - 21,022,827 (138,010)
query : 1 - 2,856 (2,856/2,876)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001861)
HIX0001861
HIT000025685
(
AL137397
)
genome : 20,884,818 - 20,886,258 (1,441)
query : 1 - 1,441 (1,441/1,453)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001861)
HIX0001861
HIT000104797 (
ENST00000237822
)
genome : 20,884,818 - 21,022,874 (138,057)
query : 1 - 2,903 (2,903/2,903)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001861)
HIX0001861
HIT000038023
(
BC017473
)
genome : 20,884,986 - 21,022,847 (137,862)
query : 1 - 2,708 (2,708/2,732)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001861)
HIX0001861
HIT000499817
(
AK316204
)
genome : 20,886,152 - 21,022,861 (136,710)
query : 1 - 1,256 (1,256/1,256)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001861)
HIX0001861
HIT000495118
(
AK300494
)
genome : 20,886,303 - 21,022,842 (136,540)
query : 1 - 995 (995/995)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001861)
HIX0001861
HIT000499923
(
AK316310
)
genome : 20,886,385 - 21,022,861 (136,477)
query : 1 - 1,179 (1,179/1,179)
6 exons
identity = 0.999
3'(1.000;0.988;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001861)
HIX0001861
HIT000533354 (
ENST00000435420
)
genome : 20,886,385 - 21,022,861 (136,477)
query : 1 - 1,179 (1,179/1,179)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001861)
HIX0001861
HIT000496117
(
AK301493
)
genome : 20,886,445 - 21,022,861 (136,417)
query : 1 - 902 (902/902)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;0.994;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001861)
HIX0001861
HIT000493868
(
AK299244
)
genome : 20,886,509 - 21,022,830 (136,322)
query : 2 - 934 (933/934)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001861)
HIX0001861
HIT000538800 (
ENST00000440866
)
genome : 20,886,509 - 21,022,830 (136,322)
query : 1 - 933 (933/933)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001861)
HIX0001861
HIT000494179
(
AK299555
)
genome : 20,886,558 - 21,022,861 (136,304)
query : 1 - 1,024 (1,024/1,024)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.994;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001861)
HIX0001861
HIT000499775
(
AK316162
)
genome : 20,886,567 - 21,022,849 (136,283)
query : 1 - 973 (973/973)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001861)
HIX0001861
HIT000640986 (
ENST00000541941
)
genome : 20,886,567 - 21,022,849 (136,283)
query : 1 - 973 (973/973)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001861)
HIX0021375
HIT000005684
(
AK022410
)
genome : 20,888,614 - 20,892,237 (3,624)
query : 1 - 3,628 (3,628/3,628)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021375)
HIX0021375
HIT000044997
(
AK125124
)
genome : 20,891,118 - 20,894,383 (3,266)
query : 1 - 3,267 (3,267/3,267)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021375)
HIX0001861
HIT000530881 (
ENST00000432947
)
genome : 20,901,335 - 21,022,861 (121,527)
query : 1 - 548 (548/548)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001861)
HIX0001861
HIT000510195 (
ENST00000412261
)
genome : 20,939,812 - 21,022,882 (83,071)
query : 1 - 566 (566/566)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001861)
HIX0017820
HIT000004759
(
AK021485
)
genome : 20,944,003 - 20,945,599 (1,597)
query : 1 - 1,595 (1,595/1,595)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017820)
HIX0001861
HIT000504137 (
ENST00000402479
)
genome : 20,974,618 - 21,022,849 (48,232)
query : 1 - 493 (493/493)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001861)
HIX0001861
HIT000517759 (
ENST00000419825
)
genome : 20,988,649 - 21,022,870 (34,222)
query : 1 - 826 (826/826)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001861)
HIX0030355
HIT000097106
(
BC042077
)
genome : 21,059,531 - 21,061,421 (1,891)
query : 1 - 1,498 (1,498/1,561)
2 exons
identity = 0.999
5'(0.995;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030355)
HIX0163036
HIT000545194 (
ENST00000447260
)
genome : 21,059,531 - 21,061,421 (1,891)
query : 1 - 1,498 (1,498/1,498)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163036)
HIX0117765
HIT000429679
(
AK310813
)
genome : 20,646,832 - 20,648,368 (1,537)
query : 3 - 904 (902/904)
2 exons
identity = 0.991
5'(0.981;1.000)3'
coverage = 0.998
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117765)
HIX0117765
HIT000200815 (
NM_004040
)
genome : 20,646,835 - 20,649,201 (2,367)
query : 1 - 2,367 (2,367/2,384)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117765)
HIX0117765
HIT000262374
(
BC066954
)
genome : 20,646,835 - 20,649,197 (2,363)
query : 1 - 2,363 (2,363/2,378)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117765)
HIX0117765
HIT000044271
(
AK124398
)
genome : 20,646,835 - 20,649,200 (2,366)
query : 1 - 2,367 (2,367/2,367)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117765)
HIX0117765
HIT000110856 (
ENST00000272233
)
genome : 20,646,835 - 20,649,200 (2,366)
query : 1 - 2,366 (2,366/2,366)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117765)
HIX0117765
HIT000428857
(
AK309991
)
genome : 20,646,835 - 20,648,681 (1,847)
query : 1 - 1,463 (1,463/1,463)
2 exons
identity = 0.997
5'(0.995;0.998)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117765)
HIX0001860
HIT000544759 (
ENST00000446825
)
genome : 20,760,208 - 20,850,842 (90,635)
query : 1 - 841 (841/841)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001860)
HIX0001860
HIT000053530
(
BC050636
)
genome : 20,817,583 - 20,850,844 (33,262)
query : 1 - 2,364 (2,364/2,451)
7 exons
identity = 0.998
3'(0.999;0.993;0.994;0.995;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001860)
HIX0001860
HIT000208732 (
NM_022460
)
genome : 20,817,564 - 20,850,864 (33,301)
query : 1 - 2,403 (2,403/2,403)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001860)
HIX0001860
HIT000116611 (
ENST00000304031
)
genome : 20,817,582 - 20,850,849 (33,268)
query : 1 - 2,370 (2,370/2,370)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001860)
HIX0001860
HIT000007585
(
AK024311
)
genome : 20,817,584 - 20,850,857 (33,274)
query : 1 - 1,795 (1,795/1,795)
5 exons
identity = 0.991
3'(0.989;0.982;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001860)
HIX0001860
HIT000433249
(
AK314383
)
genome : 20,818,747 - 20,850,860 (32,114)
query : 1 - 1,216 (1,216/1,216)
7 exons
identity = 0.998
3'(1.000;0.993;0.994;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001860)
HIX0001860
HIT000556674 (
ENST00000458740
)
genome : 20,821,939 - 20,838,275 (16,337)
query : 1 - 518 (518/518)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001860)
HIX0181974
pHIT000003839 ( pHIT000003839 )
genome : 20,729,227 - 20,729,736 (510)
query : 1 - 510 (510/510)
1 exon
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0181974)
CAGE tag :
H04BA25G1503,H04BA28B2106,H05BA54G0607
H05BA56P1510,H05BC13K0410
HIX0203984
eHIT000014670 ( ESTsASS_2_771 )
genome : 20,382,137 - 20,384,343 (2,207)
query : 1 - 641 (641/641)
2 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203984)
ESTs used for assembly :
CB528940
AC018741.5
19500001-19648060 F -
NCBI
AC010096.10
19648061-19811058 F -
NCBI
AC019055.6
19811059-19985445 F -
NCBI
AC013400.8
19985446-20112987 F +
NCBI
AC079145.4
20112988-20248857 F -
NCBI
AC098828.3
20248858-20374266 F +
NCBI
AC116171.2
20374267-20384978 F +
NCBI
AC104792.5
20384979-20436113 F +
NCBI
AC007041.3
20436114-20609310 F +
NCBI
AC023137.5
20609311-20682073 F +
NCBI
AC012065.8
20682074-20888088 F +
NCBI
AC012361.10
20888089-21093272 F +
NCBI
AC112228.3
21093273-21100000 F +
NCBI